Build log for rdkit (201909.1-4+b1) on armhf

rdkit → 201909.1-4+b1 → armhf → 2020-05-23 15:09:12

sbuild (Debian sbuild) 0.72.0 (25 Oct 2016) on mb-lxc-02

+==============================================================================+
| rdkit 201909.1-4+b1 (armhf)                  Sat, 23 May 2020 13:27:32 +0000 |
+==============================================================================+

Package: rdkit
Version: 201909.1-4+b1
Source Version: 201909.1-4
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bullseye-staging-armhf-sbuild-08f7c4ef-9365-47e1-a292-f4579f1bef48' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [11.7 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [12.8 MB]
Fetched 24.5 MB in 11s (2224 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'rdkit' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/debichem-team/rdkit.git
Please use:
git clone https://salsa.debian.org/debichem-team/rdkit.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 52.6 MB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main rdkit 201909.1-4 (dsc) [2782 B]
Get:2 http://172.17.0.1/private bullseye-staging/main rdkit 201909.1-4 (tar) [52.5 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main rdkit 201909.1-4 (diff) [99.2 kB]
Fetched 52.6 MB in 13s (4175 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/rdkit-KUGk6C/rdkit-201909.1' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/rdkit-KUGk6C' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install build-essential                                                      |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-E4rqUw/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-E4rqUw/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-E4rqUw/gpg/trustdb.gpg: trustdb created
gpg: key 37145E60F90AF620: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg:               imported: 1
gpg: key 37145E60F90AF620: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 37145E60F90AF620: secret key imported
gpg: Total number processed: 1
gpg:              unchanged: 1
gpg:       secret keys read: 1
gpg:   secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-E4rqUw/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-E4rqUw/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-E4rqUw/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-E4rqUw/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-E4rqUw/apt_archive ./ Packages [432 B]
Fetched 2108 B in 1s (3577 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install core build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  libpam-cap netbase
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 9 not upgraded.
Need to get 848 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-E4rqUw/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 848 B in 0s (44.1 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12233 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any all)

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: bison, cmake, debhelper (>> 9), dh-python, doxygen, flex, imagemagick, latexmk, libboost-dev, libboost-iostreams-dev, libboost-python-dev, libboost-regex-dev, libboost-system-dev, libboost-thread-dev, libcoordgen-dev, libmaeparser-dev, librsvg2-bin, libsqlite3-dev, pandoc, postgresql-server-dev-all, python3-dev, python3-numpy, python3-pandas, python3-pil | python3-imaging, python3-recommonmark, python3-sphinx, rapidjson-dev, texlive-fonts-recommended, texlive-latex-base, texlive-latex-extra, texlive-latex-recommended
Filtered Build-Depends: bison, cmake, debhelper (>> 9), dh-python, doxygen, flex, imagemagick, latexmk, libboost-dev, libboost-iostreams-dev, libboost-python-dev, libboost-regex-dev, libboost-system-dev, libboost-thread-dev, libcoordgen-dev, libmaeparser-dev, librsvg2-bin, libsqlite3-dev, pandoc, postgresql-server-dev-all, python3-dev, python3-numpy, python3-pandas, python3-pil, python3-recommonmark, python3-sphinx, rapidjson-dev, texlive-fonts-recommended, texlive-latex-base, texlive-latex-extra, texlive-latex-recommended
dpkg-deb: building package 'sbuild-build-depends-rdkit-dummy' in '/<<BUILDDIR>>/resolver-E4rqUw/apt_archive/sbuild-build-depends-rdkit-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy sbuild-build-depends-rdkit-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-E4rqUw/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-E4rqUw/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-E4rqUw/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-E4rqUw/apt_archive ./ Sources [704 B]
Get:5 copy:/<<BUILDDIR>>/resolver-E4rqUw/apt_archive ./ Packages [774 B]
Fetched 2811 B in 1s (4294 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install rdkit build dependencies (apt-based resolver)
-----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following package was automatically installed and is no longer required:
  libpam-cap
Use 'apt autoremove' to remove it.
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev binfmt-support bison bsdmainutils
  ca-certificates clang-10 cmake cmake-data debhelper dh-autoreconf dh-python
  dh-strip-nondeterminism docutils-common doxygen dwz file flex fontconfig
  fontconfig-config fonts-dejavu-core fonts-lmodern gettext gettext-base
  groff-base hicolor-icon-theme icu-devtools imagemagick imagemagick-6-common
  imagemagick-6.q16 intltool-debian latexmk libapache-pom-java
  libarchive-zip-perl libarchive13 libblas3 libboost-atomic1.67-dev
  libboost-atomic1.67.0 libboost-chrono1.67-dev libboost-chrono1.67.0
  libboost-date-time1.67-dev libboost-date-time1.67.0 libboost-dev
  libboost-iostreams-dev libboost-iostreams1.67-dev libboost-iostreams1.67.0
  libboost-python-dev libboost-python1.67-dev libboost-python1.67.0
  libboost-regex-dev libboost-regex1.67-dev libboost-regex1.67.0
  libboost-serialization1.67-dev libboost-serialization1.67.0
  libboost-system-dev libboost-system1.67-dev libboost-system1.67.0
  libboost-thread-dev libboost-thread1.67-dev libboost-thread1.67.0
  libboost1.67-dev libbrotli1 libbsd0 libcairo2 libclang-common-10-dev
  libclang-cpp10 libclang1-10 libclang1-9 libcommons-logging-java
  libcommons-parent-java libcoordgen-dev libcoordgen1 libcroco3 libcurl4
  libdatrie1 libde265-0 libdebhelper-perl libedit2 libelf1 libexpat1
  libexpat1-dev libffi-dev libfftw3-double3 libfile-stripnondeterminism-perl
  libfontbox-java libfontconfig1 libfreetype6 libfribidi0 libgc1c2
  libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgfortran5 libglib2.0-0
  libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libheif1 libice6 libicu-dev
  libicu63 libimagequant0 libjbig0 libjpeg62-turbo libjs-jquery
  libjs-sphinxdoc libjs-underscore libjsoncpp1 libk5crypto3 libkeyutils1
  libkpathsea6 libkrb5-3 libkrb5support0 liblapack3 liblcms2-2 libllvm10
  libllvm9 liblqr-1-0 libltdl7 libmaeparser-dev libmaeparser1 libmagic-mgc
  libmagic1 libmagickcore-6.q16-6 libmagickwand-6.q16-6 libmpdec2
  libncurses-dev libncurses6 libnghttp2-14 libobjc-9-dev libobjc4 libopenjp2-7
  libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
  libpaper1 libpdfbox-java libpfm4 libpipeline1 libpixman-1-0 libpng16-16
  libpq-dev libpq5 libprocps8 libpsl5 libptexenc1 libpython-dev
  libpython-stdlib libpython2-dev libpython2-stdlib libpython2.7
  libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-dev
  libpython3-stdlib libpython3.7-minimal libpython3.7-stdlib libpython3.8
  libpython3.8-dev libpython3.8-minimal libpython3.8-stdlib librhash0
  librsvg2-2 librsvg2-bin librtmp1 libsigsegv2 libsm6 libsqlite3-dev libssh2-1
  libssl1.1 libsub-override-perl libsynctex2 libteckit0 libtexlua53
  libtexluajit2 libthai-data libthai0 libtiff5 libtinfo-dev libtinfo5 libtool
  libuchardet0 libuv1 libwebp6 libwebpdemux2 libwebpmux3 libx11-6 libx11-data
  libx265-179 libxapian30 libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1
  libxdmcp6 libxext6 libxi6 libxml2 libxmu6 libxpm4 libxrender1 libxt6
  libyaml-0-2 libz3-4 libz3-dev libzzip-0-13 llvm-10 llvm-10-dev
  llvm-10-runtime llvm-10-tools m4 man-db mime-support node-jquery openssl
  pandoc pandoc-data po-debconf postgresql-client-12 postgresql-client-common
  postgresql-common postgresql-server-dev-12 postgresql-server-dev-all
  preview-latex-style procps python python-babel-localedata python-dev
  python-minimal python2 python2-dev python2-minimal python2.7 python2.7-dev
  python2.7-minimal python3 python3-alabaster python3-babel python3-certifi
  python3-chardet python3-commonmark-bkrs python3-dateutil python3-dev
  python3-distutils python3-docutils python3-idna python3-imagesize
  python3-jinja2 python3-lib2to3 python3-markupsafe python3-minimal
  python3-numpy python3-packaging python3-pandas python3-pandas-lib
  python3-pil python3-pkg-resources python3-pygments python3-pyparsing
  python3-recommonmark python3-requests python3-roman python3-six
  python3-sphinx python3-tz python3-urllib3 python3-yaml python3.7
  python3.7-minimal python3.8 python3.8-dev python3.8-minimal rapidjson-dev
  sensible-utils sgml-base shared-mime-info sphinx-common ssl-cert t1utils
  tex-common texlive-base texlive-binaries texlive-fonts-recommended
  texlive-latex-base texlive-latex-extra texlive-latex-recommended
  texlive-pictures ucf x11-common xdg-utils xml-core zlib1g-dev
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc bison-doc wamerican | wordlist
  whois vacation clang-10-doc cmake-doc ninja-build dh-make doxygen-latex
  doxygen-doc doxygen-gui graphviz flex-doc gettext-doc libasprintf-dev
  libgettextpo-dev groff imagemagick-doc autotrace cups-bsd | lpr | lprng curl
  enscript ffmpeg gimp gnuplot grads hp2xx html2ps libwmf-bin mplayer povray
  radiance sane-utils transfig ufraw-batch ghostscript lrzip libboost-doc
  libboost1.67-doc gccxml libboost-container1.67-dev libboost-context1.67-dev
  libboost-contract1.67-dev libboost-coroutine1.67-dev
  libboost-exception1.67-dev libboost-fiber1.67-dev
  libboost-filesystem1.67-dev libboost-graph1.67-dev
  libboost-graph-parallel1.67-dev libboost-locale1.67-dev libboost-log1.67-dev
  libboost-math1.67-dev libboost-mpi1.67-dev libboost-mpi-python1.67-dev
  libboost-numpy1.67-dev libboost-program-options1.67-dev
  libboost-random1.67-dev libboost-signals1.67-dev libboost-stacktrace1.67-dev
  libboost-test1.67-dev libboost-timer1.67-dev libboost-type-erasure1.67-dev
  libboost-wave1.67-dev libboost1.67-tools-dev libmpfrc++-dev libntl-dev
  libavalon-framework-java libcommons-logging-java-doc
  libexcalibur-logkit-java liblog4j1.2-java libfftw3-bin libfftw3-dev krb5-doc
  krb5-user icu-doc liblcms2-utils libmagickcore-6.q16-6-extra ncurses-doc
  postgresql-doc-12 sqlite3-doc libtool-doc gfortran | fortran95-compiler
  gcj-jdk xapian-tools llvm-10-doc m4-doc apparmor less www-browser
  texlive-xetex texlive-luatex pandoc-citeproc context wkhtmltopdf ghc nodejs
  php ruby r-base-core libjs-mathjax node-katex libmail-box-perl postgresql-12
  libjson-perl python-doc python-tk python2-doc python2.7-doc python3-doc
  python3-tk python3-venv python-commonmark-bkrs-doc docutils-doc
  fonts-linuxlibertine | ttf-linux-libertine texlive-lang-french
  python-jinja2-doc gfortran python-numpy-doc python3-pytest python3-numpy-dbg
  python-pandas-doc python3-statsmodels python-pil-doc python3-pil-dbg
  python3-setuptools python-pygments-doc ttf-bitstream-vera
  python-pyparsing-doc python3-cryptography python3-openssl python3-socks
  python-requests-doc dvipng fonts-freefont-otf python3-sphinx-rtd-theme
  python3-stemmer sphinx-doc texlive-plain-generic python3.7-venv
  python3.7-doc python3.8-venv python3.8-doc rapidjson-doc sgml-base-doc
  openssl-blacklist gv | postscript-viewer perl-tk xpdf | pdf-viewer xzdec
  texlive-fonts-recommended-doc texlive-latex-base-doc icc-profiles
  libfile-which-perl libspreadsheet-parseexcel-perl texlive-latex-extra-doc
  texlive-latex-recommended-doc texlive-pstricks dot2tex prerex ruby-tcltk
  | libtcltk-ruby texlive-pictures-doc vprerex
Recommended packages:
  libomp-10-dev libfl-dev curl | wget | lynx libmagickcore-6.q16-6-extra
  ghostscript netpbm xpdf | pdf-viewer gv | postscript-viewer
  libarchive-cpio-perl libgdk-pixbuf2.0-bin libglib2.0-data xdg-user-dirs
  javascript-common krb5-locales gsfonts libgpm2 publicsuffix librsvg2-common
  libltdl-dev libmail-sendmail-perl logrotate psmisc python3-scipy
  python3-matplotlib python3-numexpr python3-tables python3-xlrd
  python3-openpyxl python3-xlwt python3-bs4 python3-html5lib python3-lxml
  python3-olefile lmodern dvisvgm tex-gyre tipa texlive-plain-generic ruby
  | ruby-interpreter tk libfile-mimeinfo-perl libnet-dbus-perl
  libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev binfmt-support bison bsdmainutils
  ca-certificates clang-10 cmake cmake-data debhelper dh-autoreconf dh-python
  dh-strip-nondeterminism docutils-common doxygen dwz file flex fontconfig
  fontconfig-config fonts-dejavu-core fonts-lmodern gettext gettext-base
  groff-base hicolor-icon-theme icu-devtools imagemagick imagemagick-6-common
  imagemagick-6.q16 intltool-debian latexmk libapache-pom-java
  libarchive-zip-perl libarchive13 libblas3 libboost-atomic1.67-dev
  libboost-atomic1.67.0 libboost-chrono1.67-dev libboost-chrono1.67.0
  libboost-date-time1.67-dev libboost-date-time1.67.0 libboost-dev
  libboost-iostreams-dev libboost-iostreams1.67-dev libboost-iostreams1.67.0
  libboost-python-dev libboost-python1.67-dev libboost-python1.67.0
  libboost-regex-dev libboost-regex1.67-dev libboost-regex1.67.0
  libboost-serialization1.67-dev libboost-serialization1.67.0
  libboost-system-dev libboost-system1.67-dev libboost-system1.67.0
  libboost-thread-dev libboost-thread1.67-dev libboost-thread1.67.0
  libboost1.67-dev libbrotli1 libbsd0 libcairo2 libclang-common-10-dev
  libclang-cpp10 libclang1-10 libclang1-9 libcommons-logging-java
  libcommons-parent-java libcoordgen-dev libcoordgen1 libcroco3 libcurl4
  libdatrie1 libde265-0 libdebhelper-perl libedit2 libelf1 libexpat1
  libexpat1-dev libffi-dev libfftw3-double3 libfile-stripnondeterminism-perl
  libfontbox-java libfontconfig1 libfreetype6 libfribidi0 libgc1c2
  libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgfortran5 libglib2.0-0
  libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libheif1 libice6 libicu-dev
  libicu63 libimagequant0 libjbig0 libjpeg62-turbo libjs-jquery
  libjs-sphinxdoc libjs-underscore libjsoncpp1 libk5crypto3 libkeyutils1
  libkpathsea6 libkrb5-3 libkrb5support0 liblapack3 liblcms2-2 libllvm10
  libllvm9 liblqr-1-0 libltdl7 libmaeparser-dev libmaeparser1 libmagic-mgc
  libmagic1 libmagickcore-6.q16-6 libmagickwand-6.q16-6 libmpdec2
  libncurses-dev libncurses6 libnghttp2-14 libobjc-9-dev libobjc4 libopenjp2-7
  libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
  libpaper1 libpdfbox-java libpfm4 libpipeline1 libpixman-1-0 libpng16-16
  libpq-dev libpq5 libprocps8 libpsl5 libptexenc1 libpython-dev
  libpython-stdlib libpython2-dev libpython2-stdlib libpython2.7
  libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-dev
  libpython3-stdlib libpython3.7-minimal libpython3.7-stdlib libpython3.8
  libpython3.8-dev libpython3.8-minimal libpython3.8-stdlib librhash0
  librsvg2-2 librsvg2-bin librtmp1 libsigsegv2 libsm6 libsqlite3-dev libssh2-1
  libssl1.1 libsub-override-perl libsynctex2 libteckit0 libtexlua53
  libtexluajit2 libthai-data libthai0 libtiff5 libtinfo-dev libtinfo5 libtool
  libuchardet0 libuv1 libwebp6 libwebpdemux2 libwebpmux3 libx11-6 libx11-data
  libx265-179 libxapian30 libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1
  libxdmcp6 libxext6 libxi6 libxml2 libxmu6 libxpm4 libxrender1 libxt6
  libyaml-0-2 libz3-4 libz3-dev libzzip-0-13 llvm-10 llvm-10-dev
  llvm-10-runtime llvm-10-tools m4 man-db mime-support node-jquery openssl
  pandoc pandoc-data po-debconf postgresql-client-12 postgresql-client-common
  postgresql-common postgresql-server-dev-12 postgresql-server-dev-all
  preview-latex-style procps python python-babel-localedata python-dev
  python-minimal python2 python2-dev python2-minimal python2.7 python2.7-dev
  python2.7-minimal python3 python3-alabaster python3-babel python3-certifi
  python3-chardet python3-commonmark-bkrs python3-dateutil python3-dev
  python3-distutils python3-docutils python3-idna python3-imagesize
  python3-jinja2 python3-lib2to3 python3-markupsafe python3-minimal
  python3-numpy python3-packaging python3-pandas python3-pandas-lib
  python3-pil python3-pkg-resources python3-pygments python3-pyparsing
  python3-recommonmark python3-requests python3-roman python3-six
  python3-sphinx python3-tz python3-urllib3 python3-yaml python3.7
  python3.7-minimal python3.8 python3.8-dev python3.8-minimal rapidjson-dev
  sbuild-build-depends-rdkit-dummy sensible-utils sgml-base shared-mime-info
  sphinx-common ssl-cert t1utils tex-common texlive-base texlive-binaries
  texlive-fonts-recommended texlive-latex-base texlive-latex-extra
  texlive-latex-recommended texlive-pictures ucf x11-common xdg-utils xml-core
  zlib1g-dev
0 upgraded, 297 newly installed, 0 to remove and 9 not upgraded.
Need to get 309 MB of archives.
After this operation, 1537 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-E4rqUw/apt_archive ./ sbuild-build-depends-rdkit-dummy 0.invalid.0 [1056 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf libbsd0 armhf 0.10.0-1 [112 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf libtinfo5 armhf 6.2-1 [318 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-5 [783 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.2-2 [29.6 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.1-1 [1262 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-4 [185 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf flex armhf 2.6.4-6.2 [427 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf libfftw3-double3 armhf 3.3.8-2 [429 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf libexpat1 armhf 2.2.9-1 [71.5 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf libpng16-16 armhf 1.6.37-2 [274 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf libfreetype6 armhf 2.10.1-2 [330 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf sensible-utils all 0.0.12+nmu1 [16.0 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf ucf all 3.0038+nmu1 [69.0 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf fonts-dejavu-core all 2.37-1 [1068 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf fontconfig-config all 2.13.1-4.2 [281 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf libfontconfig1 armhf 2.13.1-4.2 [328 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf libde265-0 armhf 1.0.4-1+rpi1 [183 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf libx265-179 armhf 3.2.1-1 [539 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf libheif1 armhf 1.6.1-1 [138 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf libjbig0 armhf 2.1-3.1+b2 [27.6 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo armhf 1:1.5.2-2+b1 [110 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf liblcms2-2 armhf 2.9-4 [119 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.64.2-1 [1158 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf liblqr-1-0 armhf 0.4.2-2.1 [23.1 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf libltdl7 armhf 2.4.6-14 [388 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf libopenjp2-7 armhf 2.3.1-1 [140 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf libwebp6 armhf 0.6.1-2 [228 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf libtiff5 armhf 4.1.0+git191117-2 [250 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf libwebpmux3 armhf 0.6.1-2 [94.2 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB]
Get:35 http://172.17.0.1/private bullseye-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:36 http://172.17.0.1/private bullseye-staging/main armhf libxcb1 armhf 1.14-2 [135 kB]
Get:37 http://172.17.0.1/private bullseye-staging/main armhf libx11-data all 2:1.6.9-2 [298 kB]
Get:38 http://172.17.0.1/private bullseye-staging/main armhf libx11-6 armhf 2:1.6.9-2 [692 kB]
Get:39 http://172.17.0.1/private bullseye-staging/main armhf libxext6 armhf 2:1.3.3-1+b2 [47.8 kB]
Get:40 http://172.17.0.1/private bullseye-staging/main armhf libicu63 armhf 63.2-3 [7987 kB]
Get:41 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.10+dfsg-5 [592 kB]
Get:42 http://172.17.0.1/private bullseye-staging/main armhf imagemagick-6-common all 8:6.9.10.23+dfsg-2.1 [200 kB]
Get:43 http://172.17.0.1/private bullseye-staging/main armhf libmagickcore-6.q16-6 armhf 8:6.9.10.23+dfsg-2.1+b2 [1616 kB]
Get:44 http://172.17.0.1/private bullseye-staging/main armhf libmagickwand-6.q16-6 armhf 8:6.9.10.23+dfsg-2.1+b2 [424 kB]
Get:45 http://172.17.0.1/private bullseye-staging/main armhf libpython2.7-minimal armhf 2.7.18-1 [395 kB]
Get:46 http://172.17.0.1/private bullseye-staging/main armhf python2.7-minimal armhf 2.7.18-1 [1099 kB]
Get:47 http://172.17.0.1/private bullseye-staging/main armhf python2-minimal armhf 2.7.17-2 [41.4 kB]
Get:48 http://172.17.0.1/private bullseye-staging/main armhf python-minimal armhf 2.7.17-2 [21.1 kB]
Get:49 http://172.17.0.1/private bullseye-staging/main armhf libssl1.1 armhf 1.1.1g-1 [1272 kB]
Get:50 http://172.17.0.1/private bullseye-staging/main armhf mime-support all 3.64 [37.8 kB]
Get:51 http://172.17.0.1/private bullseye-staging/main armhf libpython2.7-stdlib armhf 2.7.18-1 [1821 kB]
Get:52 http://172.17.0.1/private bullseye-staging/main armhf python2.7 armhf 2.7.18-1 [309 kB]
Get:53 http://172.17.0.1/private bullseye-staging/main armhf libpython2-stdlib armhf 2.7.17-2 [20.9 kB]
Get:54 http://172.17.0.1/private bullseye-staging/main armhf libpython-stdlib armhf 2.7.17-2 [20.9 kB]
Get:55 http://172.17.0.1/private bullseye-staging/main armhf python2 armhf 2.7.17-2 [41.7 kB]
Get:56 http://172.17.0.1/private bullseye-staging/main armhf python armhf 2.7.17-2 [22.9 kB]
Get:57 http://172.17.0.1/private bullseye-staging/main armhf libpython3.8-minimal armhf 3.8.3-1 [751 kB]
Get:58 http://172.17.0.1/private bullseye-staging/main armhf python3.8-minimal armhf 3.8.3-1 [1629 kB]
Get:59 http://172.17.0.1/private bullseye-staging/main armhf python3-minimal armhf 3.8.2-3 [37.6 kB]
Get:60 http://172.17.0.1/private bullseye-staging/main armhf libmpdec2 armhf 2.4.2-3 [68.1 kB]
Get:61 http://172.17.0.1/private bullseye-staging/main armhf libpython3.8-stdlib armhf 3.8.3-1 [1600 kB]
Get:62 http://172.17.0.1/private bullseye-staging/main armhf python3.8 armhf 3.8.3-1 [416 kB]
Get:63 http://172.17.0.1/private bullseye-staging/main armhf libpython3-stdlib armhf 3.8.2-3 [20.8 kB]
Get:64 http://172.17.0.1/private bullseye-staging/main armhf python3 armhf 3.8.2-3 [63.7 kB]
Get:65 http://172.17.0.1/private bullseye-staging/main armhf libpython3.7-minimal armhf 3.7.7-1+b1 [585 kB]
Get:66 http://172.17.0.1/private bullseye-staging/main armhf python3.7-minimal armhf 3.7.7-1+b1 [1530 kB]
Get:67 http://172.17.0.1/private bullseye-staging/main armhf sgml-base all 1.30 [15.1 kB]
Get:68 http://172.17.0.1/private bullseye-staging/main armhf tex-common all 6.14 [53.3 kB]
Get:69 http://172.17.0.1/private bullseye-staging/main armhf libncurses6 armhf 6.2-1 [79.5 kB]
Get:70 http://172.17.0.1/private bullseye-staging/main armhf libprocps8 armhf 2:3.3.16-5 [59.8 kB]
Get:71 http://172.17.0.1/private bullseye-staging/main armhf procps armhf 2:3.3.16-5 [238 kB]
Get:72 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.38-5 [262 kB]
Get:73 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.38-5 [113 kB]
Get:74 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.38-5 [67.0 kB]
Get:75 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-10 [117 kB]
Get:76 http://172.17.0.1/private bullseye-staging/main armhf libgc1c2 armhf 1:7.6.4-0.4 [212 kB]
Get:77 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-11.1 [341 kB]
Get:78 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:79 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.2-1 [775 kB]
Get:80 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.19.8.1-10 [435 kB]
Get:81 http://172.17.0.1/private bullseye-staging/main armhf binfmt-support armhf 2.2.1-1 [55.0 kB]
Get:82 http://172.17.0.1/private bullseye-staging/main armhf bison armhf 2:3.6.1+dfsg-2 [979 kB]
Get:83 http://172.17.0.1/private bullseye-staging/main armhf openssl armhf 1.1.1g-1 [811 kB]
Get:84 http://172.17.0.1/private bullseye-staging/main armhf ca-certificates all 20190110 [157 kB]
Get:85 http://172.17.0.1/private bullseye-staging/main armhf libedit2 armhf 3.1-20191231-1 [79.2 kB]
Get:86 http://172.17.0.1/private bullseye-staging/main armhf libz3-4 armhf 4.8.7-4 [5477 kB]
Get:87 http://172.17.0.1/private bullseye-staging/main armhf libllvm10 armhf 1:10.0.0-4+rpi1 [13.7 MB]
Get:88 http://172.17.0.1/private bullseye-staging/main armhf libclang-cpp10 armhf 1:10.0.0-4+rpi1 [8577 kB]
Get:89 http://172.17.0.1/private bullseye-staging/main armhf libobjc4 armhf 10.1.0-1+rpi1 [33.7 kB]
Get:90 http://172.17.0.1/private bullseye-staging/main armhf libobjc-9-dev armhf 9.3.0-12+rpi1 [198 kB]
Get:91 http://172.17.0.1/private bullseye-staging/main armhf libclang-common-10-dev armhf 1:10.0.0-4+rpi1 [2635 kB]
Get:92 http://172.17.0.1/private bullseye-staging/main armhf libclang1-10 armhf 1:10.0.0-4+rpi1 [6402 kB]
Get:93 http://172.17.0.1/private bullseye-staging/main armhf clang-10 armhf 1:10.0.0-4+rpi1 [98.8 kB]
Get:94 http://172.17.0.1/private bullseye-staging/main armhf cmake-data all 3.16.3-3+rpi1 [1628 kB]
Get:95 http://172.17.0.1/private bullseye-staging/main armhf libarchive13 armhf 3.4.2-1 [294 kB]
Get:96 http://172.17.0.1/private bullseye-staging/main armhf libbrotli1 armhf 1.0.7-6.1 [255 kB]
Get:97 http://172.17.0.1/private bullseye-staging/main armhf libkrb5support0 armhf 1.17-7+rpi1 [61.5 kB]
Get:98 http://172.17.0.1/private bullseye-staging/main armhf libk5crypto3 armhf 1.17-7+rpi1 [112 kB]
Get:99 http://172.17.0.1/private bullseye-staging/main armhf libkeyutils1 armhf 1.6.1-2 [14.5 kB]
Get:100 http://172.17.0.1/private bullseye-staging/main armhf libkrb5-3 armhf 1.17-7+rpi1 [318 kB]
Get:101 http://172.17.0.1/private bullseye-staging/main armhf libgssapi-krb5-2 armhf 1.17-7+rpi1 [135 kB]
Get:102 http://172.17.0.1/private bullseye-staging/main armhf libnghttp2-14 armhf 1.40.0-1+b2 [74.2 kB]
Get:103 http://172.17.0.1/private bullseye-staging/main armhf libpsl5 armhf 0.21.0-1 [53.9 kB]
Get:104 http://172.17.0.1/private bullseye-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b1 [54.3 kB]
Get:105 http://172.17.0.1/private bullseye-staging/main armhf libssh2-1 armhf 1.8.0-2.1 [126 kB]
Get:106 http://172.17.0.1/private bullseye-staging/main armhf libcurl4 armhf 7.68.0-1 [286 kB]
Get:107 http://172.17.0.1/private bullseye-staging/main armhf libjsoncpp1 armhf 1.7.4-3.1 [65.8 kB]
Get:108 http://172.17.0.1/private bullseye-staging/main armhf librhash0 armhf 1.3.9-1 [133 kB]
Get:109 http://172.17.0.1/private bullseye-staging/main armhf libuv1 armhf 1.35.0-2 [115 kB]
Get:110 http://172.17.0.1/private bullseye-staging/main armhf cmake armhf 3.16.3-3+rpi1 [2653 kB]
Get:111 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-14 [513 kB]
Get:112 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:113 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 13 [184 kB]
Get:114 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:115 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:116 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.8.0-1 [24.2 kB]
Get:117 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.8.0-1 [14.8 kB]
Get:118 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.176-1.1 [158 kB]
Get:119 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13-5 [142 kB]
Get:120 http://172.17.0.1/private bullseye-staging/main armhf libcroco3 armhf 0.6.13-1 [133 kB]
Get:121 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.19.8.1-10 [1219 kB]
Get:122 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:123 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:124 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 13 [1002 kB]
Get:125 http://172.17.0.1/private bullseye-staging/main armhf python3-lib2to3 all 3.8.2-2 [78.4 kB]
Get:126 http://172.17.0.1/private bullseye-staging/main armhf python3-distutils all 3.8.2-2 [145 kB]
Get:127 http://172.17.0.1/private bullseye-staging/main armhf dh-python all 4.20200315 [91.6 kB]
Get:128 http://172.17.0.1/private bullseye-staging/main armhf xml-core all 0.18+nmu1 [23.8 kB]
Get:129 http://172.17.0.1/private bullseye-staging/main armhf docutils-common all 0.16+dfsg-2 [129 kB]
Get:130 http://172.17.0.1/private bullseye-staging/main armhf libllvm9 armhf 1:9.0.1-12+rpi1 [13.1 MB]
Get:131 http://172.17.0.1/private bullseye-staging/main armhf libclang1-9 armhf 1:9.0.1-12+rpi1 [5584 kB]
Get:132 http://172.17.0.1/private bullseye-staging/main armhf libxapian30 armhf 1.4.15-1 [951 kB]
Get:133 http://172.17.0.1/private bullseye-staging/main armhf doxygen armhf 1.8.17-1 [7672 kB]
Get:134 http://172.17.0.1/private bullseye-staging/main armhf fontconfig armhf 2.13.1-4.2 [416 kB]
Get:135 http://172.17.0.1/private bullseye-staging/main armhf fonts-lmodern all 2.004.5-6 [4539 kB]
Get:136 http://172.17.0.1/private bullseye-staging/main armhf hicolor-icon-theme all 0.17-2 [11.4 kB]
Get:137 http://172.17.0.1/private bullseye-staging/main armhf icu-devtools armhf 63.2-3 [163 kB]
Get:138 http://172.17.0.1/private bullseye-staging/main armhf imagemagick-6.q16 armhf 8:6.9.10.23+dfsg-2.1+b2 [580 kB]
Get:139 http://172.17.0.1/private bullseye-staging/main armhf imagemagick armhf 8:6.9.10.23+dfsg-2.1+b2 [156 kB]
Get:140 http://172.17.0.1/private bullseye-staging/main armhf libpaper1 armhf 1.1.28 [20.5 kB]
Get:141 http://172.17.0.1/private bullseye-staging/main armhf libpaper-utils armhf 1.1.28 [17.7 kB]
Get:142 http://172.17.0.1/private bullseye-staging/main armhf libkpathsea6 armhf 2020.20200327.54578-4 [162 kB]
Get:143 http://172.17.0.1/private bullseye-staging/main armhf libptexenc1 armhf 2020.20200327.54578-4 [60.6 kB]
Get:144 http://172.17.0.1/private bullseye-staging/main armhf libsynctex2 armhf 2020.20200327.54578-4 [69.5 kB]
Get:145 http://172.17.0.1/private bullseye-staging/main armhf libtexlua53 armhf 2020.20200327.54578-4 [101 kB]
Get:146 http://172.17.0.1/private bullseye-staging/main armhf libtexluajit2 armhf 2020.20200327.54578-4 [207 kB]
Get:147 http://172.17.0.1/private bullseye-staging/main armhf t1utils armhf 1.41-4 [52.3 kB]
Get:148 http://172.17.0.1/private bullseye-staging/main armhf libpixman-1-0 armhf 0.36.0-1 [458 kB]
Get:149 http://172.17.0.1/private bullseye-staging/main armhf libxcb-render0 armhf 1.14-2 [110 kB]
Get:150 http://172.17.0.1/private bullseye-staging/main armhf libxcb-shm0 armhf 1.14-2 [101 kB]
Get:151 http://172.17.0.1/private bullseye-staging/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB]
Get:152 http://172.17.0.1/private bullseye-staging/main armhf libcairo2 armhf 1.16.0-4 [599 kB]
Get:153 http://172.17.0.1/private bullseye-staging/main armhf libgraphite2-3 armhf 1.3.14-1 [70.3 kB]
Get:154 http://172.17.0.1/private bullseye-staging/main armhf libharfbuzz0b armhf 2.6.4-1+rpi1 [1308 kB]
Get:155 http://172.17.0.1/private bullseye-staging/main armhf libteckit0 armhf 2.5.8+ds2-5 [245 kB]
Get:156 http://172.17.0.1/private bullseye-staging/main armhf x11-common all 1:7.7+20 [252 kB]
Get:157 http://172.17.0.1/private bullseye-staging/main armhf libice6 armhf 2:1.0.9-2 [51.6 kB]
Get:158 http://172.17.0.1/private bullseye-staging/main armhf libsm6 armhf 2:1.2.3-1 [32.9 kB]
Get:159 http://172.17.0.1/private bullseye-staging/main armhf libxt6 armhf 1:1.1.5-1+b3 [156 kB]
Get:160 http://172.17.0.1/private bullseye-staging/main armhf libxmu6 armhf 2:1.1.2-2+b3 [52.1 kB]
Get:161 http://172.17.0.1/private bullseye-staging/main armhf libxpm4 armhf 1:3.5.12-1 [43.6 kB]
Get:162 http://172.17.0.1/private bullseye-staging/main armhf libxaw7 armhf 2:1.0.13-1+b2 [163 kB]
Get:163 http://172.17.0.1/private bullseye-staging/main armhf libxi6 armhf 2:1.7.9-1 [77.8 kB]
Get:164 http://172.17.0.1/private bullseye-staging/main armhf libzzip-0-13 armhf 0.13.62-3.2 [51.6 kB]
Get:165 http://172.17.0.1/private bullseye-staging/main armhf texlive-binaries armhf 2020.20200327.54578-4 [6860 kB]
Get:166 http://172.17.0.1/private bullseye-staging/main armhf xdg-utils all 1.1.3-2 [74.6 kB]
Get:167 http://172.17.0.1/private bullseye-staging/main armhf texlive-base all 2020.20200417-1 [21.5 MB]
Get:168 http://172.17.0.1/private bullseye-staging/main armhf texlive-latex-base all 2020.20200417-1 [1058 kB]
Get:169 http://172.17.0.1/private bullseye-staging/main armhf latexmk all 1:4.69a-0.1 [392 kB]
Get:170 http://172.17.0.1/private bullseye-staging/main armhf libapache-pom-java all 18-1 [4676 B]
Get:171 http://172.17.0.1/private bullseye-staging/main armhf libblas3 armhf 3.9.0-2 [108 kB]
Get:172 http://172.17.0.1/private bullseye-staging/main armhf libboost1.67-dev armhf 1.67.0-18 [8389 kB]
Get:173 http://172.17.0.1/private bullseye-staging/main armhf libboost-atomic1.67.0 armhf 1.67.0-18 [227 kB]
Get:174 http://172.17.0.1/private bullseye-staging/main armhf libboost-atomic1.67-dev armhf 1.67.0-18 [226 kB]
Get:175 http://172.17.0.1/private bullseye-staging/main armhf libboost-system1.67.0 armhf 1.67.0-18 [229 kB]
Get:176 http://172.17.0.1/private bullseye-staging/main armhf libboost-chrono1.67.0 armhf 1.67.0-18 [232 kB]
Get:177 http://172.17.0.1/private bullseye-staging/main armhf libboost-chrono1.67-dev armhf 1.67.0-18 [235 kB]
Get:178 http://172.17.0.1/private bullseye-staging/main armhf libboost-date-time1.67.0 armhf 1.67.0-18 [237 kB]
Get:179 http://172.17.0.1/private bullseye-staging/main armhf libboost-serialization1.67.0 armhf 1.67.0-18 [301 kB]
Get:180 http://172.17.0.1/private bullseye-staging/main armhf libboost-serialization1.67-dev armhf 1.67.0-18 [369 kB]
Get:181 http://172.17.0.1/private bullseye-staging/main armhf libboost-date-time1.67-dev armhf 1.67.0-18 [249 kB]
Get:182 http://172.17.0.1/private bullseye-staging/main armhf libboost-dev armhf 1.67.0.2+b11 [4464 B]
Get:183 http://172.17.0.1/private bullseye-staging/main armhf libboost-regex1.67.0 armhf 1.67.0-18 [452 kB]
Get:184 http://172.17.0.1/private bullseye-staging/main armhf libicu-dev armhf 63.2-3 [8860 kB]
Get:185 http://172.17.0.1/private bullseye-staging/main armhf libboost-regex1.67-dev armhf 1.67.0-18 [556 kB]
Get:186 http://172.17.0.1/private bullseye-staging/main armhf libboost-iostreams1.67.0 armhf 1.67.0-18 [246 kB]
Get:187 http://172.17.0.1/private bullseye-staging/main armhf libboost-iostreams1.67-dev armhf 1.67.0-18 [254 kB]
Get:188 http://172.17.0.1/private bullseye-staging/main armhf libboost-iostreams-dev armhf 1.67.0.2+b11 [4236 B]
Get:189 http://172.17.0.1/private bullseye-staging/main armhf libboost-python1.67.0 armhf 1.67.0-18 [322 kB]
Get:190 http://172.17.0.1/private bullseye-staging/main armhf libpython2.7 armhf 2.7.18-1 [882 kB]
Get:191 http://172.17.0.1/private bullseye-staging/main armhf libexpat1-dev armhf 2.2.9-1 [119 kB]
Get:192 http://172.17.0.1/private bullseye-staging/main armhf libpython2.7-dev armhf 2.7.18-1 [2069 kB]
Get:193 http://172.17.0.1/private bullseye-staging/main armhf libpython2-dev armhf 2.7.17-2 [21.0 kB]
Get:194 http://172.17.0.1/private bullseye-staging/main armhf libpython-dev armhf 2.7.17-2 [21.0 kB]
Get:195 http://172.17.0.1/private bullseye-staging/main armhf python2.7-dev armhf 2.7.18-1 [292 kB]
Get:196 http://172.17.0.1/private bullseye-staging/main armhf python2-dev armhf 2.7.17-2 [1224 B]
Get:197 http://172.17.0.1/private bullseye-staging/main armhf python-dev armhf 2.7.17-2 [1196 B]
Get:198 http://172.17.0.1/private bullseye-staging/main armhf libpython3.8 armhf 3.8.3-1 [1365 kB]
Get:199 http://172.17.0.1/private bullseye-staging/main armhf libpython3.8-dev armhf 3.8.3-1 [3015 kB]
Get:200 http://172.17.0.1/private bullseye-staging/main armhf libpython3-dev armhf 3.8.2-3 [21.0 kB]
Get:201 http://172.17.0.1/private bullseye-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [184 kB]
Get:202 http://172.17.0.1/private bullseye-staging/main armhf python3.8-dev armhf 3.8.3-1 [519 kB]
Get:203 http://172.17.0.1/private bullseye-staging/main armhf python3-dev armhf 3.8.2-3 [1164 B]
Get:204 http://172.17.0.1/private bullseye-staging/main armhf libboost-python1.67-dev armhf 1.67.0-18 [350 kB]
Get:205 http://172.17.0.1/private bullseye-staging/main armhf libboost-python-dev armhf 1.67.0.2+b11 [4548 B]
Get:206 http://172.17.0.1/private bullseye-staging/main armhf libboost-regex-dev armhf 1.67.0.2+b11 [4516 B]
Get:207 http://172.17.0.1/private bullseye-staging/main armhf libboost-system1.67-dev armhf 1.67.0-18 [231 kB]
Get:208 http://172.17.0.1/private bullseye-staging/main armhf libboost-system-dev armhf 1.67.0.2+b11 [4388 B]
Get:209 http://172.17.0.1/private bullseye-staging/main armhf libboost-thread1.67.0 armhf 1.67.0-18 [263 kB]
Get:210 http://172.17.0.1/private bullseye-staging/main armhf libboost-thread1.67-dev armhf 1.67.0-18 [272 kB]
Get:211 http://172.17.0.1/private bullseye-staging/main armhf libboost-thread-dev armhf 1.67.0.2+b11 [4280 B]
Get:212 http://172.17.0.1/private bullseye-staging/main armhf libcommons-parent-java all 43-1 [10.8 kB]
Get:213 http://172.17.0.1/private bullseye-staging/main armhf libcommons-logging-java all 1.2-2 [62.2 kB]
Get:214 http://172.17.0.1/private bullseye-staging/main armhf libcoordgen1 armhf 1.4.0-2 [164 kB]
Get:215 http://172.17.0.1/private bullseye-staging/main armhf libcoordgen-dev armhf 1.4.0-2 [44.8 kB]
Get:216 http://172.17.0.1/private bullseye-staging/main armhf libdatrie1 armhf 0.2.12-3+b1 [36.4 kB]
Get:217 http://172.17.0.1/private bullseye-staging/main armhf libffi-dev armhf 3.3-4 [57.9 kB]
Get:218 http://172.17.0.1/private bullseye-staging/main armhf libfontbox-java all 1:1.8.16-2 [211 kB]
Get:219 http://172.17.0.1/private bullseye-staging/main armhf libfribidi0 armhf 1.0.8-2 [63.5 kB]
Get:220 http://172.17.0.1/private bullseye-staging/main armhf libgdk-pixbuf2.0-common all 2.40.0+dfsg-4 [317 kB]
Get:221 http://172.17.0.1/private bullseye-staging/main armhf shared-mime-info armhf 1.15-1 [785 kB]
Get:222 http://172.17.0.1/private bullseye-staging/main armhf libgdk-pixbuf2.0-0 armhf 2.40.0+dfsg-4 [158 kB]
Get:223 http://172.17.0.1/private bullseye-staging/main armhf libgfortran5 armhf 10.1.0-1+rpi1 [232 kB]
Get:224 http://172.17.0.1/private bullseye-staging/main armhf libimagequant0 armhf 2.12.2-1.1 [27.2 kB]
Get:225 http://172.17.0.1/private bullseye-staging/main armhf node-jquery all 3.5.1+dfsg-3 [309 kB]
Get:226 http://172.17.0.1/private bullseye-staging/main armhf libjs-jquery all 3.5.1+dfsg-3 [3548 B]
Get:227 http://172.17.0.1/private bullseye-staging/main armhf libjs-underscore all 1.9.1~dfsg-1 [99.4 kB]
Get:228 http://172.17.0.1/private bullseye-staging/main armhf libjs-sphinxdoc all 2.4.3-2 [110 kB]
Get:229 http://172.17.0.1/private bullseye-staging/main armhf liblapack3 armhf 3.9.0-2 [1602 kB]
Get:230 http://172.17.0.1/private bullseye-staging/main armhf libmaeparser1 armhf 1.2.3-3 [72.7 kB]
Get:231 http://172.17.0.1/private bullseye-staging/main armhf libmaeparser-dev armhf 1.2.3-3 [13.0 kB]
Get:232 http://172.17.0.1/private bullseye-staging/main armhf libncurses-dev armhf 6.2-1 [284 kB]
Get:233 http://172.17.0.1/private bullseye-staging/main armhf libthai-data all 0.1.28-3 [170 kB]
Get:234 http://172.17.0.1/private bullseye-staging/main armhf libthai0 armhf 0.1.28-3 [51.0 kB]
Get:235 http://172.17.0.1/private bullseye-staging/main armhf libpango-1.0-0 armhf 1.44.7-4 [165 kB]
Get:236 http://172.17.0.1/private bullseye-staging/main armhf libpangoft2-1.0-0 armhf 1.44.7-4 [52.6 kB]
Get:237 http://172.17.0.1/private bullseye-staging/main armhf libpangocairo-1.0-0 armhf 1.44.7-4 [44.9 kB]
Get:238 http://172.17.0.1/private bullseye-staging/main armhf libpdfbox-java all 1:1.8.16-2 [5205 kB]
Get:239 http://172.17.0.1/private bullseye-staging/main armhf libpfm4 armhf 4.10.1+git44-ga2909cd-1 [37.0 kB]
Get:240 http://172.17.0.1/private bullseye-staging/main armhf libpq5 armhf 12.3-1 [155 kB]
Get:241 http://172.17.0.1/private bullseye-staging/main armhf libpq-dev armhf 12.3-1 [126 kB]
Get:242 http://172.17.0.1/private bullseye-staging/main armhf libpython3.7-stdlib armhf 3.7.7-1+b1 [1668 kB]
Get:243 http://172.17.0.1/private bullseye-staging/main armhf librsvg2-2 armhf 2.48.4+dfsg-1 [1213 kB]
Get:244 http://172.17.0.1/private bullseye-staging/main armhf librsvg2-bin armhf 2.48.4+dfsg-1 [29.6 kB]
Get:245 http://172.17.0.1/private bullseye-staging/main armhf libsqlite3-dev armhf 3.31.1-5 [711 kB]
Get:246 http://172.17.0.1/private bullseye-staging/main armhf libtinfo-dev armhf 6.2-1 [924 B]
Get:247 http://172.17.0.1/private bullseye-staging/main armhf libwebpdemux2 armhf 0.6.1-2 [86.7 kB]
Get:248 http://172.17.0.1/private bullseye-staging/main armhf libyaml-0-2 armhf 0.2.2-1 [40.0 kB]
Get:249 http://172.17.0.1/private bullseye-staging/main armhf libz3-dev armhf 4.8.7-4 [87.3 kB]
Get:250 http://172.17.0.1/private bullseye-staging/main armhf llvm-10-runtime armhf 1:10.0.0-4+rpi1 [194 kB]
Get:251 http://172.17.0.1/private bullseye-staging/main armhf llvm-10 armhf 1:10.0.0-4+rpi1 [4270 kB]
Get:252 http://172.17.0.1/private bullseye-staging/main armhf python3-pkg-resources all 46.1.3-1 [183 kB]
Get:253 http://172.17.0.1/private bullseye-staging/main armhf python3-pygments all 2.3.1+dfsg-3 [596 kB]
Get:254 http://172.17.0.1/private bullseye-staging/main armhf python3-yaml armhf 5.3.1-2 [133 kB]
Get:255 http://172.17.0.1/private bullseye-staging/main armhf llvm-10-tools armhf 1:10.0.0-4+rpi1 [316 kB]
Get:256 http://172.17.0.1/private bullseye-staging/main armhf llvm-10-dev armhf 1:10.0.0-4+rpi1 [25.8 MB]
Get:257 http://172.17.0.1/private bullseye-staging/main armhf pandoc-data all 2.5-3 [349 kB]
Get:258 http://172.17.0.1/private bullseye-staging/main armhf pandoc armhf 2.5-3+b1 [18.6 MB]
Get:259 http://172.17.0.1/private bullseye-staging/main armhf postgresql-client-common all 215 [87.4 kB]
Get:260 http://172.17.0.1/private bullseye-staging/main armhf postgresql-client-12 armhf 12.3-1 [1311 kB]
Get:261 http://172.17.0.1/private bullseye-staging/main armhf ssl-cert all 1.0.39 [20.8 kB]
Get:262 http://172.17.0.1/private bullseye-staging/main armhf postgresql-common all 215 [236 kB]
Get:263 http://172.17.0.1/private bullseye-staging/main armhf postgresql-server-dev-12 armhf 12.3-1 [925 kB]
Get:264 http://172.17.0.1/private bullseye-staging/main armhf postgresql-server-dev-all all 215 [68.9 kB]
Get:265 http://172.17.0.1/private bullseye-staging/main armhf preview-latex-style all 11.91-2 [201 kB]
Get:266 http://172.17.0.1/private bullseye-staging/main armhf python-babel-localedata all 2.8.0+dfsg.1-3 [4998 kB]
Get:267 http://172.17.0.1/private bullseye-staging/main armhf python3-alabaster all 0.7.8-1.1 [18.6 kB]
Get:268 http://172.17.0.1/private bullseye-staging/main armhf python3-tz all 2019.3-2 [27.3 kB]
Get:269 http://172.17.0.1/private bullseye-staging/main armhf python3-babel all 2.8.0+dfsg.1-3 [99.8 kB]
Get:270 http://172.17.0.1/private bullseye-staging/main armhf python3-certifi all 2020.4.5.1-1 [151 kB]
Get:271 http://172.17.0.1/private bullseye-staging/main armhf python3-chardet all 3.0.4-7 [81.1 kB]
Get:272 http://172.17.0.1/private bullseye-staging/main armhf python3-commonmark-bkrs all 0.5.4+ds-4 [29.5 kB]
Get:273 http://172.17.0.1/private bullseye-staging/main armhf python3-six all 1.14.0-3 [16.7 kB]
Get:274 http://172.17.0.1/private bullseye-staging/main armhf python3-dateutil all 2.8.1-4 [81.6 kB]
Get:275 http://172.17.0.1/private bullseye-staging/main armhf python3-roman all 2.0.0-4 [8972 B]
Get:276 http://172.17.0.1/private bullseye-staging/main armhf python3-docutils all 0.16+dfsg-2 [383 kB]
Get:277 http://172.17.0.1/private bullseye-staging/main armhf python3-idna all 2.9-1 [37.1 kB]
Get:278 http://172.17.0.1/private bullseye-staging/main armhf python3-imagesize all 1.2.0-2 [5824 B]
Get:279 http://172.17.0.1/private bullseye-staging/main armhf python3-markupsafe armhf 1.1.1-1 [15.0 kB]
Get:280 http://172.17.0.1/private bullseye-staging/main armhf python3-jinja2 all 2.10.1-2 [107 kB]
Get:281 http://172.17.0.1/private bullseye-staging/main armhf python3.7 armhf 3.7.7-1+b1 [354 kB]
Get:282 http://172.17.0.1/private bullseye-staging/main armhf python3-numpy armhf 1:1.17.4-5+b1 [4484 kB]
Get:283 http://172.17.0.1/private bullseye-staging/main armhf python3-pyparsing all 2.4.7-1 [109 kB]
Get:284 http://172.17.0.1/private bullseye-staging/main armhf python3-packaging all 20.3-1.2 [29.9 kB]
Get:285 http://172.17.0.1/private bullseye-staging/main armhf python3-pandas-lib armhf 0.25.3+dfsg2-2+rpi1 [3840 kB]
Get:286 http://172.17.0.1/private bullseye-staging/main armhf python3-pandas all 0.25.3+dfsg2-2+rpi1 [1983 kB]
Get:287 http://172.17.0.1/private bullseye-staging/main armhf python3-pil armhf 7.0.0-4 [393 kB]
Get:288 http://172.17.0.1/private bullseye-staging/main armhf python3-recommonmark all 0.4.0+ds-6 [15.0 kB]
Get:289 http://172.17.0.1/private bullseye-staging/main armhf python3-urllib3 all 1.25.9-1 [105 kB]
Get:290 http://172.17.0.1/private bullseye-staging/main armhf python3-requests all 2.23.0+dfsg-2 [71.4 kB]
Get:291 http://172.17.0.1/private bullseye-staging/main armhf sphinx-common all 2.4.3-2 [550 kB]
Get:292 http://172.17.0.1/private bullseye-staging/main armhf python3-sphinx all 2.4.3-2 [502 kB]
Get:293 http://172.17.0.1/private bullseye-staging/main armhf rapidjson-dev all 1.1.0+dfsg2-6 [98.7 kB]
Get:294 http://172.17.0.1/private bullseye-staging/main armhf texlive-fonts-recommended all 2020.20200417-1 [5002 kB]
Get:295 http://172.17.0.1/private bullseye-staging/main armhf texlive-latex-recommended all 2020.20200417-1 [15.7 MB]
Get:296 http://172.17.0.1/private bullseye-staging/main armhf texlive-pictures all 2020.20200417-1 [4516 kB]
Get:297 http://172.17.0.1/private bullseye-staging/main armhf texlive-latex-extra all 2020.20200417-1 [12.9 MB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 309 MB in 1min 10s (4418 kB/s)
Selecting previously unselected package libbsd0:armhf.
(Reading database ... 12233 files and directories currently installed.)
Preparing to unpack .../00-libbsd0_0.10.0-1_armhf.deb ...
Unpacking libbsd0:armhf (0.10.0-1) ...
Selecting previously unselected package libtinfo5:armhf.
Preparing to unpack .../01-libtinfo5_6.2-1_armhf.deb ...
Unpacking libtinfo5:armhf (6.2-1) ...
Selecting previously unselected package bsdmainutils.
Preparing to unpack .../02-bsdmainutils_11.1.2_armhf.deb ...
Unpacking bsdmainutils (11.1.2) ...
Selecting previously unselected package libuchardet0:armhf.
Preparing to unpack .../03-libuchardet0_0.0.6-3_armhf.deb ...
Unpacking libuchardet0:armhf (0.0.6-3) ...
Selecting previously unselected package groff-base.
Preparing to unpack .../04-groff-base_1.22.4-5_armhf.deb ...
Unpacking groff-base (1.22.4-5) ...
Selecting previously unselected package libpipeline1:armhf.
Preparing to unpack .../05-libpipeline1_1.5.2-2_armhf.deb ...
Unpacking libpipeline1:armhf (1.5.2-2) ...
Selecting previously unselected package man-db.
Preparing to unpack .../06-man-db_2.9.1-1_armhf.deb ...
Unpacking man-db (2.9.1-1) ...
Selecting previously unselected package libsigsegv2:armhf.
Preparing to unpack .../07-libsigsegv2_2.12-2_armhf.deb ...
Unpacking libsigsegv2:armhf (2.12-2) ...
Selecting previously unselected package m4.
Preparing to unpack .../08-m4_1.4.18-4_armhf.deb ...
Unpacking m4 (1.4.18-4) ...
Selecting previously unselected package flex.
Preparing to unpack .../09-flex_2.6.4-6.2_armhf.deb ...
Unpacking flex (2.6.4-6.2) ...
Selecting previously unselected package libfftw3-double3:armhf.
Preparing to unpack .../10-libfftw3-double3_3.3.8-2_armhf.deb ...
Unpacking libfftw3-double3:armhf (3.3.8-2) ...
Selecting previously unselected package libexpat1:armhf.
Preparing to unpack .../11-libexpat1_2.2.9-1_armhf.deb ...
Unpacking libexpat1:armhf (2.2.9-1) ...
Selecting previously unselected package libpng16-16:armhf.
Preparing to unpack .../12-libpng16-16_1.6.37-2_armhf.deb ...
Unpacking libpng16-16:armhf (1.6.37-2) ...
Selecting previously unselected package libfreetype6:armhf.
Preparing to unpack .../13-libfreetype6_2.10.1-2_armhf.deb ...
Unpacking libfreetype6:armhf (2.10.1-2) ...
Selecting previously unselected package sensible-utils.
Preparing to unpack .../14-sensible-utils_0.0.12+nmu1_all.deb ...
Unpacking sensible-utils (0.0.12+nmu1) ...
Selecting previously unselected package ucf.
Preparing to unpack .../15-ucf_3.0038+nmu1_all.deb ...
Moving old data out of the way
Unpacking ucf (3.0038+nmu1) ...
Selecting previously unselected package fonts-dejavu-core.
Preparing to unpack .../16-fonts-dejavu-core_2.37-1_all.deb ...
Unpacking fonts-dejavu-core (2.37-1) ...
Selecting previously unselected package fontconfig-config.
Preparing to unpack .../17-fontconfig-config_2.13.1-4.2_all.deb ...
Unpacking fontconfig-config (2.13.1-4.2) ...
Selecting previously unselected package libfontconfig1:armhf.
Preparing to unpack .../18-libfontconfig1_2.13.1-4.2_armhf.deb ...
Unpacking libfontconfig1:armhf (2.13.1-4.2) ...
Selecting previously unselected package libde265-0:armhf.
Preparing to unpack .../19-libde265-0_1.0.4-1+rpi1_armhf.deb ...
Unpacking libde265-0:armhf (1.0.4-1+rpi1) ...
Selecting previously unselected package libx265-179:armhf.
Preparing to unpack .../20-libx265-179_3.2.1-1_armhf.deb ...
Unpacking libx265-179:armhf (3.2.1-1) ...
Selecting previously unselected package libheif1:armhf.
Preparing to unpack .../21-libheif1_1.6.1-1_armhf.deb ...
Unpacking libheif1:armhf (1.6.1-1) ...
Selecting previously unselected package libjbig0:armhf.
Preparing to unpack .../22-libjbig0_2.1-3.1+b2_armhf.deb ...
Unpacking libjbig0:armhf (2.1-3.1+b2) ...
Selecting previously unselected package libjpeg62-turbo:armhf.
Preparing to unpack .../23-libjpeg62-turbo_1%3a1.5.2-2+b1_armhf.deb ...
Unpacking libjpeg62-turbo:armhf (1:1.5.2-2+b1) ...
Selecting previously unselected package liblcms2-2:armhf.
Preparing to unpack .../24-liblcms2-2_2.9-4_armhf.deb ...
Unpacking liblcms2-2:armhf (2.9-4) ...
Selecting previously unselected package libglib2.0-0:armhf.
Preparing to unpack .../25-libglib2.0-0_2.64.2-1_armhf.deb ...
Unpacking libglib2.0-0:armhf (2.64.2-1) ...
Selecting previously unselected package liblqr-1-0:armhf.
Preparing to unpack .../26-liblqr-1-0_0.4.2-2.1_armhf.deb ...
Unpacking liblqr-1-0:armhf (0.4.2-2.1) ...
Selecting previously unselected package libltdl7:armhf.
Preparing to unpack .../27-libltdl7_2.4.6-14_armhf.deb ...
Unpacking libltdl7:armhf (2.4.6-14) ...
Selecting previously unselected package libopenjp2-7:armhf.
Preparing to unpack .../28-libopenjp2-7_2.3.1-1_armhf.deb ...
Unpacking libopenjp2-7:armhf (2.3.1-1) ...
Selecting previously unselected package libwebp6:armhf.
Preparing to unpack .../29-libwebp6_0.6.1-2_armhf.deb ...
Unpacking libwebp6:armhf (0.6.1-2) ...
Selecting previously unselected package libtiff5:armhf.
Preparing to unpack .../30-libtiff5_4.1.0+git191117-2_armhf.deb ...
Unpacking libtiff5:armhf (4.1.0+git191117-2) ...
Selecting previously unselected package libwebpmux3:armhf.
Preparing to unpack .../31-libwebpmux3_0.6.1-2_armhf.deb ...
Unpacking libwebpmux3:armhf (0.6.1-2) ...
Selecting previously unselected package libxau6:armhf.
Preparing to unpack .../32-libxau6_1%3a1.0.8-1+b2_armhf.deb ...
Unpacking libxau6:armhf (1:1.0.8-1+b2) ...
Selecting previously unselected package libxdmcp6:armhf.
Preparing to unpack .../33-libxdmcp6_1%3a1.1.2-3_armhf.deb ...
Unpacking libxdmcp6:armhf (1:1.1.2-3) ...
Selecting previously unselected package libxcb1:armhf.
Preparing to unpack .../34-libxcb1_1.14-2_armhf.deb ...
Unpacking libxcb1:armhf (1.14-2) ...
Selecting previously unselected package libx11-data.
Preparing to unpack .../35-libx11-data_2%3a1.6.9-2_all.deb ...
Unpacking libx11-data (2:1.6.9-2) ...
Selecting previously unselected package libx11-6:armhf.
Preparing to unpack .../36-libx11-6_2%3a1.6.9-2_armhf.deb ...
Unpacking libx11-6:armhf (2:1.6.9-2) ...
Selecting previously unselected package libxext6:armhf.
Preparing to unpack .../37-libxext6_2%3a1.3.3-1+b2_armhf.deb ...
Unpacking libxext6:armhf (2:1.3.3-1+b2) ...
Selecting previously unselected package libicu63:armhf.
Preparing to unpack .../38-libicu63_63.2-3_armhf.deb ...
Unpacking libicu63:armhf (63.2-3) ...
Selecting previously unselected package libxml2:armhf.
Preparing to unpack .../39-libxml2_2.9.10+dfsg-5_armhf.deb ...
Unpacking libxml2:armhf (2.9.10+dfsg-5) ...
Selecting previously unselected package imagemagick-6-common.
Preparing to unpack .../40-imagemagick-6-common_8%3a6.9.10.23+dfsg-2.1_all.deb ...
Unpacking imagemagick-6-common (8:6.9.10.23+dfsg-2.1) ...
Selecting previously unselected package libmagickcore-6.q16-6:armhf.
Preparing to unpack .../41-libmagickcore-6.q16-6_8%3a6.9.10.23+dfsg-2.1+b2_armhf.deb ...
Unpacking libmagickcore-6.q16-6:armhf (8:6.9.10.23+dfsg-2.1+b2) ...
Selecting previously unselected package libmagickwand-6.q16-6:armhf.
Preparing to unpack .../42-libmagickwand-6.q16-6_8%3a6.9.10.23+dfsg-2.1+b2_armhf.deb ...
Unpacking libmagickwand-6.q16-6:armhf (8:6.9.10.23+dfsg-2.1+b2) ...
Selecting previously unselected package libpython2.7-minimal:armhf.
Preparing to unpack .../43-libpython2.7-minimal_2.7.18-1_armhf.deb ...
Unpacking libpython2.7-minimal:armhf (2.7.18-1) ...
Selecting previously unselected package python2.7-minimal.
Preparing to unpack .../44-python2.7-minimal_2.7.18-1_armhf.deb ...
Unpacking python2.7-minimal (2.7.18-1) ...
Selecting previously unselected package python2-minimal.
Preparing to unpack .../45-python2-minimal_2.7.17-2_armhf.deb ...
Unpacking python2-minimal (2.7.17-2) ...
Selecting previously unselected package python-minimal.
Preparing to unpack .../46-python-minimal_2.7.17-2_armhf.deb ...
Unpacking python-minimal (2.7.17-2) ...
Selecting previously unselected package libssl1.1:armhf.
Preparing to unpack .../47-libssl1.1_1.1.1g-1_armhf.deb ...
Unpacking libssl1.1:armhf (1.1.1g-1) ...
Selecting previously unselected package mime-support.
Preparing to unpack .../48-mime-support_3.64_all.deb ...
Unpacking mime-support (3.64) ...
Selecting previously unselected package libpython2.7-stdlib:armhf.
Preparing to unpack .../49-libpython2.7-stdlib_2.7.18-1_armhf.deb ...
Unpacking libpython2.7-stdlib:armhf (2.7.18-1) ...
Selecting previously unselected package python2.7.
Preparing to unpack .../50-python2.7_2.7.18-1_armhf.deb ...
Unpacking python2.7 (2.7.18-1) ...
Selecting previously unselected package libpython2-stdlib:armhf.
Preparing to unpack .../51-libpython2-stdlib_2.7.17-2_armhf.deb ...
Unpacking libpython2-stdlib:armhf (2.7.17-2) ...
Selecting previously unselected package libpython-stdlib:armhf.
Preparing to unpack .../52-libpython-stdlib_2.7.17-2_armhf.deb ...
Unpacking libpython-stdlib:armhf (2.7.17-2) ...
Setting up libpython2.7-minimal:armhf (2.7.18-1) ...
Setting up python2.7-minimal (2.7.18-1) ...
Setting up python2-minimal (2.7.17-2) ...
Selecting previously unselected package python2.
(Reading database ... 14770 files and directories currently installed.)
Preparing to unpack .../python2_2.7.17-2_armhf.deb ...
Unpacking python2 (2.7.17-2) ...
Setting up python-minimal (2.7.17-2) ...
Selecting previously unselected package python.
(Reading database ... 14803 files and directories currently installed.)
Preparing to unpack .../python_2.7.17-2_armhf.deb ...
Unpacking python (2.7.17-2) ...
Selecting previously unselected package libpython3.8-minimal:armhf.
Preparing to unpack .../libpython3.8-minimal_3.8.3-1_armhf.deb ...
Unpacking libpython3.8-minimal:armhf (3.8.3-1) ...
Selecting previously unselected package python3.8-minimal.
Preparing to unpack .../python3.8-minimal_3.8.3-1_armhf.deb ...
Unpacking python3.8-minimal (3.8.3-1) ...
Setting up libssl1.1:armhf (1.1.1g-1) ...
Setting up libpython3.8-minimal:armhf (3.8.3-1) ...
Setting up libexpat1:armhf (2.2.9-1) ...
Setting up python3.8-minimal (3.8.3-1) ...
Selecting previously unselected package python3-minimal.
(Reading database ... 15099 files and directories currently installed.)
Preparing to unpack .../python3-minimal_3.8.2-3_armhf.deb ...
Unpacking python3-minimal (3.8.2-3) ...
Selecting previously unselected package libmpdec2:armhf.
Preparing to unpack .../libmpdec2_2.4.2-3_armhf.deb ...
Unpacking libmpdec2:armhf (2.4.2-3) ...
Selecting previously unselected package libpython3.8-stdlib:armhf.
Preparing to unpack .../libpython3.8-stdlib_3.8.3-1_armhf.deb ...
Unpacking libpython3.8-stdlib:armhf (3.8.3-1) ...
Selecting previously unselected package python3.8.
Preparing to unpack .../python3.8_3.8.3-1_armhf.deb ...
Unpacking python3.8 (3.8.3-1) ...
Selecting previously unselected package libpython3-stdlib:armhf.
Preparing to unpack .../libpython3-stdlib_3.8.2-3_armhf.deb ...
Unpacking libpython3-stdlib:armhf (3.8.2-3) ...
Setting up python3-minimal (3.8.2-3) ...
Selecting previously unselected package python3.
(Reading database ... 15476 files and directories currently installed.)
Preparing to unpack .../000-python3_3.8.2-3_armhf.deb ...
Unpacking python3 (3.8.2-3) ...
Selecting previously unselected package libpython3.7-minimal:armhf.
Preparing to unpack .../001-libpython3.7-minimal_3.7.7-1+b1_armhf.deb ...
Unpacking libpython3.7-minimal:armhf (3.7.7-1+b1) ...
Selecting previously unselected package python3.7-minimal.
Preparing to unpack .../002-python3.7-minimal_3.7.7-1+b1_armhf.deb ...
Unpacking python3.7-minimal (3.7.7-1+b1) ...
Selecting previously unselected package sgml-base.
Preparing to unpack .../003-sgml-base_1.30_all.deb ...
Unpacking sgml-base (1.30) ...
Selecting previously unselected package tex-common.
Preparing to unpack .../004-tex-common_6.14_all.deb ...
Unpacking tex-common (6.14) ...
Selecting previously unselected package libncurses6:armhf.
Preparing to unpack .../005-libncurses6_6.2-1_armhf.deb ...
Unpacking libncurses6:armhf (6.2-1) ...
Selecting previously unselected package libprocps8:armhf.
Preparing to unpack .../006-libprocps8_2%3a3.3.16-5_armhf.deb ...
Unpacking libprocps8:armhf (2:3.3.16-5) ...
Selecting previously unselected package procps.
Preparing to unpack .../007-procps_2%3a3.3.16-5_armhf.deb ...
Unpacking procps (2:3.3.16-5) ...
Selecting previously unselected package libmagic-mgc.
Preparing to unpack .../008-libmagic-mgc_1%3a5.38-5_armhf.deb ...
Unpacking libmagic-mgc (1:5.38-5) ...
Selecting previously unselected package libmagic1:armhf.
Preparing to unpack .../009-libmagic1_1%3a5.38-5_armhf.deb ...
Unpacking libmagic1:armhf (1:5.38-5) ...
Selecting previously unselected package file.
Preparing to unpack .../010-file_1%3a5.38-5_armhf.deb ...
Unpacking file (1:5.38-5) ...
Selecting previously unselected package gettext-base.
Preparing to unpack .../011-gettext-base_0.19.8.1-10_armhf.deb ...
Unpacking gettext-base (0.19.8.1-10) ...
Selecting previously unselected package libgc1c2:armhf.
Preparing to unpack .../012-libgc1c2_1%3a7.6.4-0.4_armhf.deb ...
Unpacking libgc1c2:armhf (1:7.6.4-0.4) ...
Selecting previously unselected package autoconf.
Preparing to unpack .../013-autoconf_2.69-11.1_all.deb ...
Unpacking autoconf (2.69-11.1) ...
Selecting previously unselected package autotools-dev.
Preparing to unpack .../014-autotools-dev_20180224.1_all.deb ...
Unpacking autotools-dev (20180224.1) ...
Selecting previously unselected package automake.
Preparing to unpack .../015-automake_1%3a1.16.2-1_all.deb ...
Unpacking automake (1:1.16.2-1) ...
Selecting previously unselected package autopoint.
Preparing to unpack .../016-autopoint_0.19.8.1-10_all.deb ...
Unpacking autopoint (0.19.8.1-10) ...
Selecting previously unselected package binfmt-support.
Preparing to unpack .../017-binfmt-support_2.2.1-1_armhf.deb ...
Unpacking binfmt-support (2.2.1-1) ...
Selecting previously unselected package bison.
Preparing to unpack .../018-bison_2%3a3.6.1+dfsg-2_armhf.deb ...
Unpacking bison (2:3.6.1+dfsg-2) ...
Selecting previously unselected package openssl.
Preparing to unpack .../019-openssl_1.1.1g-1_armhf.deb ...
Unpacking openssl (1.1.1g-1) ...
Selecting previously unselected package ca-certificates.
Preparing to unpack .../020-ca-certificates_20190110_all.deb ...
Unpacking ca-certificates (20190110) ...
Selecting previously unselected package libedit2:armhf.
Preparing to unpack .../021-libedit2_3.1-20191231-1_armhf.deb ...
Unpacking libedit2:armhf (3.1-20191231-1) ...
Selecting previously unselected package libz3-4:armhf.
Preparing to unpack .../022-libz3-4_4.8.7-4_armhf.deb ...
Unpacking libz3-4:armhf (4.8.7-4) ...
Selecting previously unselected package libllvm10:armhf.
Preparing to unpack .../023-libllvm10_1%3a10.0.0-4+rpi1_armhf.deb ...
Unpacking libllvm10:armhf (1:10.0.0-4+rpi1) ...
Selecting previously unselected package libclang-cpp10.
Preparing to unpack .../024-libclang-cpp10_1%3a10.0.0-4+rpi1_armhf.deb ...
Unpacking libclang-cpp10 (1:10.0.0-4+rpi1) ...
Selecting previously unselected package libobjc4:armhf.
Preparing to unpack .../025-libobjc4_10.1.0-1+rpi1_armhf.deb ...
Unpacking libobjc4:armhf (10.1.0-1+rpi1) ...
Selecting previously unselected package libobjc-9-dev:armhf.
Preparing to unpack .../026-libobjc-9-dev_9.3.0-12+rpi1_armhf.deb ...
Unpacking libobjc-9-dev:armhf (9.3.0-12+rpi1) ...
Selecting previously unselected package libclang-common-10-dev.
Preparing to unpack .../027-libclang-common-10-dev_1%3a10.0.0-4+rpi1_armhf.deb ...
Unpacking libclang-common-10-dev (1:10.0.0-4+rpi1) ...
Selecting previously unselected package libclang1-10.
Preparing to unpack .../028-libclang1-10_1%3a10.0.0-4+rpi1_armhf.deb ...
Unpacking libclang1-10 (1:10.0.0-4+rpi1) ...
Selecting previously unselected package clang-10.
Preparing to unpack .../029-clang-10_1%3a10.0.0-4+rpi1_armhf.deb ...
Unpacking clang-10 (1:10.0.0-4+rpi1) ...
Selecting previously unselected package cmake-data.
Preparing to unpack .../030-cmake-data_3.16.3-3+rpi1_all.deb ...
Unpacking cmake-data (3.16.3-3+rpi1) ...
Selecting previously unselected package libarchive13:armhf.
Preparing to unpack .../031-libarchive13_3.4.2-1_armhf.deb ...
Unpacking libarchive13:armhf (3.4.2-1) ...
Selecting previously unselected package libbrotli1:armhf.
Preparing to unpack .../032-libbrotli1_1.0.7-6.1_armhf.deb ...
Unpacking libbrotli1:armhf (1.0.7-6.1) ...
Selecting previously unselected package libkrb5support0:armhf.
Preparing to unpack .../033-libkrb5support0_1.17-7+rpi1_armhf.deb ...
Unpacking libkrb5support0:armhf (1.17-7+rpi1) ...
Selecting previously unselected package libk5crypto3:armhf.
Preparing to unpack .../034-libk5crypto3_1.17-7+rpi1_armhf.deb ...
Unpacking libk5crypto3:armhf (1.17-7+rpi1) ...
Selecting previously unselected package libkeyutils1:armhf.
Preparing to unpack .../035-libkeyutils1_1.6.1-2_armhf.deb ...
Unpacking libkeyutils1:armhf (1.6.1-2) ...
Selecting previously unselected package libkrb5-3:armhf.
Preparing to unpack .../036-libkrb5-3_1.17-7+rpi1_armhf.deb ...
Unpacking libkrb5-3:armhf (1.17-7+rpi1) ...
Selecting previously unselected package libgssapi-krb5-2:armhf.
Preparing to unpack .../037-libgssapi-krb5-2_1.17-7+rpi1_armhf.deb ...
Unpacking libgssapi-krb5-2:armhf (1.17-7+rpi1) ...
Selecting previously unselected package libnghttp2-14:armhf.
Preparing to unpack .../038-libnghttp2-14_1.40.0-1+b2_armhf.deb ...
Unpacking libnghttp2-14:armhf (1.40.0-1+b2) ...
Selecting previously unselected package libpsl5:armhf.
Preparing to unpack .../039-libpsl5_0.21.0-1_armhf.deb ...
Unpacking libpsl5:armhf (0.21.0-1) ...
Selecting previously unselected package librtmp1:armhf.
Preparing to unpack .../040-librtmp1_2.4+20151223.gitfa8646d.1-2+b1_armhf.deb ...
Unpacking librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b1) ...
Selecting previously unselected package libssh2-1:armhf.
Preparing to unpack .../041-libssh2-1_1.8.0-2.1_armhf.deb ...
Unpacking libssh2-1:armhf (1.8.0-2.1) ...
Selecting previously unselected package libcurl4:armhf.
Preparing to unpack .../042-libcurl4_7.68.0-1_armhf.deb ...
Unpacking libcurl4:armhf (7.68.0-1) ...
Selecting previously unselected package libjsoncpp1:armhf.
Preparing to unpack .../043-libjsoncpp1_1.7.4-3.1_armhf.deb ...
Unpacking libjsoncpp1:armhf (1.7.4-3.1) ...
Selecting previously unselected package librhash0:armhf.
Preparing to unpack .../044-librhash0_1.3.9-1_armhf.deb ...
Unpacking librhash0:armhf (1.3.9-1) ...
Selecting previously unselected package libuv1:armhf.
Preparing to unpack .../045-libuv1_1.35.0-2_armhf.deb ...
Unpacking libuv1:armhf (1.35.0-2) ...
Selecting previously unselected package cmake.
Preparing to unpack .../046-cmake_3.16.3-3+rpi1_armhf.deb ...
Unpacking cmake (3.16.3-3+rpi1) ...
Selecting previously unselected package libtool.
Preparing to unpack .../047-libtool_2.4.6-14_all.deb ...
Unpacking libtool (2.4.6-14) ...
Selecting previously unselected package dh-autoreconf.
Preparing to unpack .../048-dh-autoreconf_19_all.deb ...
Unpacking dh-autoreconf (19) ...
Selecting previously unselected package libdebhelper-perl.
Preparing to unpack .../049-libdebhelper-perl_13_all.deb ...
Unpacking libdebhelper-perl (13) ...
Selecting previously unselected package libarchive-zip-perl.
Preparing to unpack .../050-libarchive-zip-perl_1.68-1_all.deb ...
Unpacking libarchive-zip-perl (1.68-1) ...
Selecting previously unselected package libsub-override-perl.
Preparing to unpack .../051-libsub-override-perl_0.09-2_all.deb ...
Unpacking libsub-override-perl (0.09-2) ...
Selecting previously unselected package libfile-stripnondeterminism-perl.
Preparing to unpack .../052-libfile-stripnondeterminism-perl_1.8.0-1_all.deb ...
Unpacking libfile-stripnondeterminism-perl (1.8.0-1) ...
Selecting previously unselected package dh-strip-nondeterminism.
Preparing to unpack .../053-dh-strip-nondeterminism_1.8.0-1_all.deb ...
Unpacking dh-strip-nondeterminism (1.8.0-1) ...
Selecting previously unselected package libelf1:armhf.
Preparing to unpack .../054-libelf1_0.176-1.1_armhf.deb ...
Unpacking libelf1:armhf (0.176-1.1) ...
Selecting previously unselected package dwz.
Preparing to unpack .../055-dwz_0.13-5_armhf.deb ...
Unpacking dwz (0.13-5) ...
Selecting previously unselected package libcroco3:armhf.
Preparing to unpack .../056-libcroco3_0.6.13-1_armhf.deb ...
Unpacking libcroco3:armhf (0.6.13-1) ...
Selecting previously unselected package gettext.
Preparing to unpack .../057-gettext_0.19.8.1-10_armhf.deb ...
Unpacking gettext (0.19.8.1-10) ...
Selecting previously unselected package intltool-debian.
Preparing to unpack .../058-intltool-debian_0.35.0+20060710.5_all.deb ...
Unpacking intltool-debian (0.35.0+20060710.5) ...
Selecting previously unselected package po-debconf.
Preparing to unpack .../059-po-debconf_1.0.21_all.deb ...
Unpacking po-debconf (1.0.21) ...
Selecting previously unselected package debhelper.
Preparing to unpack .../060-debhelper_13_all.deb ...
Unpacking debhelper (13) ...
Selecting previously unselected package python3-lib2to3.
Preparing to unpack .../061-python3-lib2to3_3.8.2-2_all.deb ...
Unpacking python3-lib2to3 (3.8.2-2) ...
Selecting previously unselected package python3-distutils.
Preparing to unpack .../062-python3-distutils_3.8.2-2_all.deb ...
Unpacking python3-distutils (3.8.2-2) ...
Selecting previously unselected package dh-python.
Preparing to unpack .../063-dh-python_4.20200315_all.deb ...
Unpacking dh-python (4.20200315) ...
Selecting previously unselected package xml-core.
Preparing to unpack .../064-xml-core_0.18+nmu1_all.deb ...
Unpacking xml-core (0.18+nmu1) ...
Selecting previously unselected package docutils-common.
Preparing to unpack .../065-docutils-common_0.16+dfsg-2_all.deb ...
Unpacking docutils-common (0.16+dfsg-2) ...
Selecting previously unselected package libllvm9:armhf.
Preparing to unpack .../066-libllvm9_1%3a9.0.1-12+rpi1_armhf.deb ...
Unpacking libllvm9:armhf (1:9.0.1-12+rpi1) ...
Selecting previously unselected package libclang1-9.
Preparing to unpack .../067-libclang1-9_1%3a9.0.1-12+rpi1_armhf.deb ...
Unpacking libclang1-9 (1:9.0.1-12+rpi1) ...
Selecting previously unselected package libxapian30:armhf.
Preparing to unpack .../068-libxapian30_1.4.15-1_armhf.deb ...
Unpacking libxapian30:armhf (1.4.15-1) ...
Selecting previously unselected package doxygen.
Preparing to unpack .../069-doxygen_1.8.17-1_armhf.deb ...
Unpacking doxygen (1.8.17-1) ...
Selecting previously unselected package fontconfig.
Preparing to unpack .../070-fontconfig_2.13.1-4.2_armhf.deb ...
Unpacking fontconfig (2.13.1-4.2) ...
Selecting previously unselected package fonts-lmodern.
Preparing to unpack .../071-fonts-lmodern_2.004.5-6_all.deb ...
Unpacking fonts-lmodern (2.004.5-6) ...
Selecting previously unselected package hicolor-icon-theme.
Preparing to unpack .../072-hicolor-icon-theme_0.17-2_all.deb ...
Unpacking hicolor-icon-theme (0.17-2) ...
Selecting previously unselected package icu-devtools.
Preparing to unpack .../073-icu-devtools_63.2-3_armhf.deb ...
Unpacking icu-devtools (63.2-3) ...
Selecting previously unselected package imagemagick-6.q16.
Preparing to unpack .../074-imagemagick-6.q16_8%3a6.9.10.23+dfsg-2.1+b2_armhf.deb ...
Unpacking imagemagick-6.q16 (8:6.9.10.23+dfsg-2.1+b2) ...
Selecting previously unselected package imagemagick.
Preparing to unpack .../075-imagemagick_8%3a6.9.10.23+dfsg-2.1+b2_armhf.deb ...
Unpacking imagemagick (8:6.9.10.23+dfsg-2.1+b2) ...
Selecting previously unselected package libpaper1:armhf.
Preparing to unpack .../076-libpaper1_1.1.28_armhf.deb ...
Unpacking libpaper1:armhf (1.1.28) ...
Selecting previously unselected package libpaper-utils.
Preparing to unpack .../077-libpaper-utils_1.1.28_armhf.deb ...
Unpacking libpaper-utils (1.1.28) ...
Selecting previously unselected package libkpathsea6:armhf.
Preparing to unpack .../078-libkpathsea6_2020.20200327.54578-4_armhf.deb ...
Unpacking libkpathsea6:armhf (2020.20200327.54578-4) ...
Selecting previously unselected package libptexenc1:armhf.
Preparing to unpack .../079-libptexenc1_2020.20200327.54578-4_armhf.deb ...
Unpacking libptexenc1:armhf (2020.20200327.54578-4) ...
Selecting previously unselected package libsynctex2:armhf.
Preparing to unpack .../080-libsynctex2_2020.20200327.54578-4_armhf.deb ...
Unpacking libsynctex2:armhf (2020.20200327.54578-4) ...
Selecting previously unselected package libtexlua53:armhf.
Preparing to unpack .../081-libtexlua53_2020.20200327.54578-4_armhf.deb ...
Unpacking libtexlua53:armhf (2020.20200327.54578-4) ...
Selecting previously unselected package libtexluajit2:armhf.
Preparing to unpack .../082-libtexluajit2_2020.20200327.54578-4_armhf.deb ...
Unpacking libtexluajit2:armhf (2020.20200327.54578-4) ...
Selecting previously unselected package t1utils.
Preparing to unpack .../083-t1utils_1.41-4_armhf.deb ...
Unpacking t1utils (1.41-4) ...
Selecting previously unselected package libpixman-1-0:armhf.
Preparing to unpack .../084-libpixman-1-0_0.36.0-1_armhf.deb ...
Unpacking libpixman-1-0:armhf (0.36.0-1) ...
Selecting previously unselected package libxcb-render0:armhf.
Preparing to unpack .../085-libxcb-render0_1.14-2_armhf.deb ...
Unpacking libxcb-render0:armhf (1.14-2) ...
Selecting previously unselected package libxcb-shm0:armhf.
Preparing to unpack .../086-libxcb-shm0_1.14-2_armhf.deb ...
Unpacking libxcb-shm0:armhf (1.14-2) ...
Selecting previously unselected package libxrender1:armhf.
Preparing to unpack .../087-libxrender1_1%3a0.9.10-1_armhf.deb ...
Unpacking libxrender1:armhf (1:0.9.10-1) ...
Selecting previously unselected package libcairo2:armhf.
Preparing to unpack .../088-libcairo2_1.16.0-4_armhf.deb ...
Unpacking libcairo2:armhf (1.16.0-4) ...
Selecting previously unselected package libgraphite2-3:armhf.
Preparing to unpack .../089-libgraphite2-3_1.3.14-1_armhf.deb ...
Unpacking libgraphite2-3:armhf (1.3.14-1) ...
Selecting previously unselected package libharfbuzz0b:armhf.
Preparing to unpack .../090-libharfbuzz0b_2.6.4-1+rpi1_armhf.deb ...
Unpacking libharfbuzz0b:armhf (2.6.4-1+rpi1) ...
Selecting previously unselected package libteckit0:armhf.
Preparing to unpack .../091-libteckit0_2.5.8+ds2-5_armhf.deb ...
Unpacking libteckit0:armhf (2.5.8+ds2-5) ...
Selecting previously unselected package x11-common.
Preparing to unpack .../092-x11-common_1%3a7.7+20_all.deb ...
Unpacking x11-common (1:7.7+20) ...
Selecting previously unselected package libice6:armhf.
Preparing to unpack .../093-libice6_2%3a1.0.9-2_armhf.deb ...
Unpacking libice6:armhf (2:1.0.9-2) ...
Selecting previously unselected package libsm6:armhf.
Preparing to unpack .../094-libsm6_2%3a1.2.3-1_armhf.deb ...
Unpacking libsm6:armhf (2:1.2.3-1) ...
Selecting previously unselected package libxt6:armhf.
Preparing to unpack .../095-libxt6_1%3a1.1.5-1+b3_armhf.deb ...
Unpacking libxt6:armhf (1:1.1.5-1+b3) ...
Selecting previously unselected package libxmu6:armhf.
Preparing to unpack .../096-libxmu6_2%3a1.1.2-2+b3_armhf.deb ...
Unpacking libxmu6:armhf (2:1.1.2-2+b3) ...
Selecting previously unselected package libxpm4:armhf.
Preparing to unpack .../097-libxpm4_1%3a3.5.12-1_armhf.deb ...
Unpacking libxpm4:armhf (1:3.5.12-1) ...
Selecting previously unselected package libxaw7:armhf.
Preparing to unpack .../098-libxaw7_2%3a1.0.13-1+b2_armhf.deb ...
Unpacking libxaw7:armhf (2:1.0.13-1+b2) ...
Selecting previously unselected package libxi6:armhf.
Preparing to unpack .../099-libxi6_2%3a1.7.9-1_armhf.deb ...
Unpacking libxi6:armhf (2:1.7.9-1) ...
Selecting previously unselected package libzzip-0-13:armhf.
Preparing to unpack .../100-libzzip-0-13_0.13.62-3.2_armhf.deb ...
Unpacking libzzip-0-13:armhf (0.13.62-3.2) ...
Selecting previously unselected package texlive-binaries.
Preparing to unpack .../101-texlive-binaries_2020.20200327.54578-4_armhf.deb ...
Unpacking texlive-binaries (2020.20200327.54578-4) ...
Selecting previously unselected package xdg-utils.
Preparing to unpack .../102-xdg-utils_1.1.3-2_all.deb ...
Unpacking xdg-utils (1.1.3-2) ...
Selecting previously unselected package texlive-base.
Preparing to unpack .../103-texlive-base_2020.20200417-1_all.deb ...
Unpacking texlive-base (2020.20200417-1) ...
Selecting previously unselected package texlive-latex-base.
Preparing to unpack .../104-texlive-latex-base_2020.20200417-1_all.deb ...
Unpacking texlive-latex-base (2020.20200417-1) ...
Selecting previously unselected package latexmk.
Preparing to unpack .../105-latexmk_1%3a4.69a-0.1_all.deb ...
Unpacking latexmk (1:4.69a-0.1) ...
Selecting previously unselected package libapache-pom-java.
Preparing to unpack .../106-libapache-pom-java_18-1_all.deb ...
Unpacking libapache-pom-java (18-1) ...
Selecting previously unselected package libblas3:armhf.
Preparing to unpack .../107-libblas3_3.9.0-2_armhf.deb ...
Unpacking libblas3:armhf (3.9.0-2) ...
Selecting previously unselected package libboost1.67-dev:armhf.
Preparing to unpack .../108-libboost1.67-dev_1.67.0-18_armhf.deb ...
Unpacking libboost1.67-dev:armhf (1.67.0-18) ...
Selecting previously unselected package libboost-atomic1.67.0:armhf.
Preparing to unpack .../109-libboost-atomic1.67.0_1.67.0-18_armhf.deb ...
Unpacking libboost-atomic1.67.0:armhf (1.67.0-18) ...
Selecting previously unselected package libboost-atomic1.67-dev:armhf.
Preparing to unpack .../110-libboost-atomic1.67-dev_1.67.0-18_armhf.deb ...
Unpacking libboost-atomic1.67-dev:armhf (1.67.0-18) ...
Selecting previously unselected package libboost-system1.67.0:armhf.
Preparing to unpack .../111-libboost-system1.67.0_1.67.0-18_armhf.deb ...
Unpacking libboost-system1.67.0:armhf (1.67.0-18) ...
Selecting previously unselected package libboost-chrono1.67.0:armhf.
Preparing to unpack .../112-libboost-chrono1.67.0_1.67.0-18_armhf.deb ...
Unpacking libboost-chrono1.67.0:armhf (1.67.0-18) ...
Selecting previously unselected package libboost-chrono1.67-dev:armhf.
Preparing to unpack .../113-libboost-chrono1.67-dev_1.67.0-18_armhf.deb ...
Unpacking libboost-chrono1.67-dev:armhf (1.67.0-18) ...
Selecting previously unselected package libboost-date-time1.67.0:armhf.
Preparing to unpack .../114-libboost-date-time1.67.0_1.67.0-18_armhf.deb ...
Unpacking libboost-date-time1.67.0:armhf (1.67.0-18) ...
Selecting previously unselected package libboost-serialization1.67.0:armhf.
Preparing to unpack .../115-libboost-serialization1.67.0_1.67.0-18_armhf.deb ...
Unpacking libboost-serialization1.67.0:armhf (1.67.0-18) ...
Selecting previously unselected package libboost-serialization1.67-dev:armhf.
Preparing to unpack .../116-libboost-serialization1.67-dev_1.67.0-18_armhf.deb ...
Unpacking libboost-serialization1.67-dev:armhf (1.67.0-18) ...
Selecting previously unselected package libboost-date-time1.67-dev:armhf.
Preparing to unpack .../117-libboost-date-time1.67-dev_1.67.0-18_armhf.deb ...
Unpacking libboost-date-time1.67-dev:armhf (1.67.0-18) ...
Selecting previously unselected package libboost-dev:armhf.
Preparing to unpack .../118-libboost-dev_1.67.0.2+b11_armhf.deb ...
Unpacking libboost-dev:armhf (1.67.0.2+b11) ...
Selecting previously unselected package libboost-regex1.67.0:armhf.
Preparing to unpack .../119-libboost-regex1.67.0_1.67.0-18_armhf.deb ...
Unpacking libboost-regex1.67.0:armhf (1.67.0-18) ...
Selecting previously unselected package libicu-dev:armhf.
Preparing to unpack .../120-libicu-dev_63.2-3_armhf.deb ...
Unpacking libicu-dev:armhf (63.2-3) ...
Selecting previously unselected package libboost-regex1.67-dev:armhf.
Preparing to unpack .../121-libboost-regex1.67-dev_1.67.0-18_armhf.deb ...
Unpacking libboost-regex1.67-dev:armhf (1.67.0-18) ...
Selecting previously unselected package libboost-iostreams1.67.0:armhf.
Preparing to unpack .../122-libboost-iostreams1.67.0_1.67.0-18_armhf.deb ...
Unpacking libboost-iostreams1.67.0:armhf (1.67.0-18) ...
Selecting previously unselected package libboost-iostreams1.67-dev:armhf.
Preparing to unpack .../123-libboost-iostreams1.67-dev_1.67.0-18_armhf.deb ...
Unpacking libboost-iostreams1.67-dev:armhf (1.67.0-18) ...
Selecting previously unselected package libboost-iostreams-dev:armhf.
Preparing to unpack .../124-libboost-iostreams-dev_1.67.0.2+b11_armhf.deb ...
Unpacking libboost-iostreams-dev:armhf (1.67.0.2+b11) ...
Selecting previously unselected package libboost-python1.67.0.
Preparing to unpack .../125-libboost-python1.67.0_1.67.0-18_armhf.deb ...
Unpacking libboost-python1.67.0 (1.67.0-18) ...
Selecting previously unselected package libpython2.7:armhf.
Preparing to unpack .../126-libpython2.7_2.7.18-1_armhf.deb ...
Unpacking libpython2.7:armhf (2.7.18-1) ...
Selecting previously unselected package libexpat1-dev:armhf.
Preparing to unpack .../127-libexpat1-dev_2.2.9-1_armhf.deb ...
Unpacking libexpat1-dev:armhf (2.2.9-1) ...
Selecting previously unselected package libpython2.7-dev:armhf.
Preparing to unpack .../128-libpython2.7-dev_2.7.18-1_armhf.deb ...
Unpacking libpython2.7-dev:armhf (2.7.18-1) ...
Selecting previously unselected package libpython2-dev:armhf.
Preparing to unpack .../129-libpython2-dev_2.7.17-2_armhf.deb ...
Unpacking libpython2-dev:armhf (2.7.17-2) ...
Selecting previously unselected package libpython-dev:armhf.
Preparing to unpack .../130-libpython-dev_2.7.17-2_armhf.deb ...
Unpacking libpython-dev:armhf (2.7.17-2) ...
Selecting previously unselected package python2.7-dev.
Preparing to unpack .../131-python2.7-dev_2.7.18-1_armhf.deb ...
Unpacking python2.7-dev (2.7.18-1) ...
Selecting previously unselected package python2-dev.
Preparing to unpack .../132-python2-dev_2.7.17-2_armhf.deb ...
Unpacking python2-dev (2.7.17-2) ...
Selecting previously unselected package python-dev.
Preparing to unpack .../133-python-dev_2.7.17-2_armhf.deb ...
Unpacking python-dev (2.7.17-2) ...
Selecting previously unselected package libpython3.8:armhf.
Preparing to unpack .../134-libpython3.8_3.8.3-1_armhf.deb ...
Unpacking libpython3.8:armhf (3.8.3-1) ...
Selecting previously unselected package libpython3.8-dev:armhf.
Preparing to unpack .../135-libpython3.8-dev_3.8.3-1_armhf.deb ...
Unpacking libpython3.8-dev:armhf (3.8.3-1) ...
Selecting previously unselected package libpython3-dev:armhf.
Preparing to unpack .../136-libpython3-dev_3.8.2-3_armhf.deb ...
Unpacking libpython3-dev:armhf (3.8.2-3) ...
Selecting previously unselected package zlib1g-dev:armhf.
Preparing to unpack .../137-zlib1g-dev_1%3a1.2.11.dfsg-2_armhf.deb ...
Unpacking zlib1g-dev:armhf (1:1.2.11.dfsg-2) ...
Selecting previously unselected package python3.8-dev.
Preparing to unpack .../138-python3.8-dev_3.8.3-1_armhf.deb ...
Unpacking python3.8-dev (3.8.3-1) ...
Selecting previously unselected package python3-dev.
Preparing to unpack .../139-python3-dev_3.8.2-3_armhf.deb ...
Unpacking python3-dev (3.8.2-3) ...
Selecting previously unselected package libboost-python1.67-dev.
Preparing to unpack .../140-libboost-python1.67-dev_1.67.0-18_armhf.deb ...
Unpacking libboost-python1.67-dev (1.67.0-18) ...
Selecting previously unselected package libboost-python-dev.
Preparing to unpack .../141-libboost-python-dev_1.67.0.2+b11_armhf.deb ...
Unpacking libboost-python-dev (1.67.0.2+b11) ...
Selecting previously unselected package libboost-regex-dev:armhf.
Preparing to unpack .../142-libboost-regex-dev_1.67.0.2+b11_armhf.deb ...
Unpacking libboost-regex-dev:armhf (1.67.0.2+b11) ...
Selecting previously unselected package libboost-system1.67-dev:armhf.
Preparing to unpack .../143-libboost-system1.67-dev_1.67.0-18_armhf.deb ...
Unpacking libboost-system1.67-dev:armhf (1.67.0-18) ...
Selecting previously unselected package libboost-system-dev:armhf.
Preparing to unpack .../144-libboost-system-dev_1.67.0.2+b11_armhf.deb ...
Unpacking libboost-system-dev:armhf (1.67.0.2+b11) ...
Selecting previously unselected package libboost-thread1.67.0:armhf.
Preparing to unpack .../145-libboost-thread1.67.0_1.67.0-18_armhf.deb ...
Unpacking libboost-thread1.67.0:armhf (1.67.0-18) ...
Selecting previously unselected package libboost-thread1.67-dev:armhf.
Preparing to unpack .../146-libboost-thread1.67-dev_1.67.0-18_armhf.deb ...
Unpacking libboost-thread1.67-dev:armhf (1.67.0-18) ...
Selecting previously unselected package libboost-thread-dev:armhf.
Preparing to unpack .../147-libboost-thread-dev_1.67.0.2+b11_armhf.deb ...
Unpacking libboost-thread-dev:armhf (1.67.0.2+b11) ...
Selecting previously unselected package libcommons-parent-java.
Preparing to unpack .../148-libcommons-parent-java_43-1_all.deb ...
Unpacking libcommons-parent-java (43-1) ...
Selecting previously unselected package libcommons-logging-java.
Preparing to unpack .../149-libcommons-logging-java_1.2-2_all.deb ...
Unpacking libcommons-logging-java (1.2-2) ...
Selecting previously unselected package libcoordgen1:armhf.
Preparing to unpack .../150-libcoordgen1_1.4.0-2_armhf.deb ...
Unpacking libcoordgen1:armhf (1.4.0-2) ...
Selecting previously unselected package libcoordgen-dev:armhf.
Preparing to unpack .../151-libcoordgen-dev_1.4.0-2_armhf.deb ...
Unpacking libcoordgen-dev:armhf (1.4.0-2) ...
Selecting previously unselected package libdatrie1:armhf.
Preparing to unpack .../152-libdatrie1_0.2.12-3+b1_armhf.deb ...
Unpacking libdatrie1:armhf (0.2.12-3+b1) ...
Selecting previously unselected package libffi-dev:armhf.
Preparing to unpack .../153-libffi-dev_3.3-4_armhf.deb ...
Unpacking libffi-dev:armhf (3.3-4) ...
Selecting previously unselected package libfontbox-java.
Preparing to unpack .../154-libfontbox-java_1%3a1.8.16-2_all.deb ...
Unpacking libfontbox-java (1:1.8.16-2) ...
Selecting previously unselected package libfribidi0:armhf.
Preparing to unpack .../155-libfribidi0_1.0.8-2_armhf.deb ...
Unpacking libfribidi0:armhf (1.0.8-2) ...
Selecting previously unselected package libgdk-pixbuf2.0-common.
Preparing to unpack .../156-libgdk-pixbuf2.0-common_2.40.0+dfsg-4_all.deb ...
Unpacking libgdk-pixbuf2.0-common (2.40.0+dfsg-4) ...
Selecting previously unselected package shared-mime-info.
Preparing to unpack .../157-shared-mime-info_1.15-1_armhf.deb ...
Unpacking shared-mime-info (1.15-1) ...
Selecting previously unselected package libgdk-pixbuf2.0-0:armhf.
Preparing to unpack .../158-libgdk-pixbuf2.0-0_2.40.0+dfsg-4_armhf.deb ...
Unpacking libgdk-pixbuf2.0-0:armhf (2.40.0+dfsg-4) ...
Selecting previously unselected package libgfortran5:armhf.
Preparing to unpack .../159-libgfortran5_10.1.0-1+rpi1_armhf.deb ...
Unpacking libgfortran5:armhf (10.1.0-1+rpi1) ...
Selecting previously unselected package libimagequant0:armhf.
Preparing to unpack .../160-libimagequant0_2.12.2-1.1_armhf.deb ...
Unpacking libimagequant0:armhf (2.12.2-1.1) ...
Selecting previously unselected package node-jquery.
Preparing to unpack .../161-node-jquery_3.5.1+dfsg-3_all.deb ...
Unpacking node-jquery (3.5.1+dfsg-3) ...
Selecting previously unselected package libjs-jquery.
Preparing to unpack .../162-libjs-jquery_3.5.1+dfsg-3_all.deb ...
Unpacking libjs-jquery (3.5.1+dfsg-3) ...
Selecting previously unselected package libjs-underscore.
Preparing to unpack .../163-libjs-underscore_1.9.1~dfsg-1_all.deb ...
Unpacking libjs-underscore (1.9.1~dfsg-1) ...
Selecting previously unselected package libjs-sphinxdoc.
Preparing to unpack .../164-libjs-sphinxdoc_2.4.3-2_all.deb ...
Unpacking libjs-sphinxdoc (2.4.3-2) ...
Selecting previously unselected package liblapack3:armhf.
Preparing to unpack .../165-liblapack3_3.9.0-2_armhf.deb ...
Unpacking liblapack3:armhf (3.9.0-2) ...
Selecting previously unselected package libmaeparser1:armhf.
Preparing to unpack .../166-libmaeparser1_1.2.3-3_armhf.deb ...
Unpacking libmaeparser1:armhf (1.2.3-3) ...
Selecting previously unselected package libmaeparser-dev:armhf.
Preparing to unpack .../167-libmaeparser-dev_1.2.3-3_armhf.deb ...
Unpacking libmaeparser-dev:armhf (1.2.3-3) ...
Selecting previously unselected package libncurses-dev:armhf.
Preparing to unpack .../168-libncurses-dev_6.2-1_armhf.deb ...
Unpacking libncurses-dev:armhf (6.2-1) ...
Selecting previously unselected package libthai-data.
Preparing to unpack .../169-libthai-data_0.1.28-3_all.deb ...
Unpacking libthai-data (0.1.28-3) ...
Selecting previously unselected package libthai0:armhf.
Preparing to unpack .../170-libthai0_0.1.28-3_armhf.deb ...
Unpacking libthai0:armhf (0.1.28-3) ...
Selecting previously unselected package libpango-1.0-0:armhf.
Preparing to unpack .../171-libpango-1.0-0_1.44.7-4_armhf.deb ...
Unpacking libpango-1.0-0:armhf (1.44.7-4) ...
Selecting previously unselected package libpangoft2-1.0-0:armhf.
Preparing to unpack .../172-libpangoft2-1.0-0_1.44.7-4_armhf.deb ...
Unpacking libpangoft2-1.0-0:armhf (1.44.7-4) ...
Selecting previously unselected package libpangocairo-1.0-0:armhf.
Preparing to unpack .../173-libpangocairo-1.0-0_1.44.7-4_armhf.deb ...
Unpacking libpangocairo-1.0-0:armhf (1.44.7-4) ...
Selecting previously unselected package libpdfbox-java.
Preparing to unpack .../174-libpdfbox-java_1%3a1.8.16-2_all.deb ...
Unpacking libpdfbox-java (1:1.8.16-2) ...
Selecting previously unselected package libpfm4:armhf.
Preparing to unpack .../175-libpfm4_4.10.1+git44-ga2909cd-1_armhf.deb ...
Unpacking libpfm4:armhf (4.10.1+git44-ga2909cd-1) ...
Selecting previously unselected package libpq5:armhf.
Preparing to unpack .../176-libpq5_12.3-1_armhf.deb ...
Unpacking libpq5:armhf (12.3-1) ...
Selecting previously unselected package libpq-dev.
Preparing to unpack .../177-libpq-dev_12.3-1_armhf.deb ...
Unpacking libpq-dev (12.3-1) ...
Selecting previously unselected package libpython3.7-stdlib:armhf.
Preparing to unpack .../178-libpython3.7-stdlib_3.7.7-1+b1_armhf.deb ...
Unpacking libpython3.7-stdlib:armhf (3.7.7-1+b1) ...
Selecting previously unselected package librsvg2-2:armhf.
Preparing to unpack .../179-librsvg2-2_2.48.4+dfsg-1_armhf.deb ...
Unpacking librsvg2-2:armhf (2.48.4+dfsg-1) ...
Selecting previously unselected package librsvg2-bin.
Preparing to unpack .../180-librsvg2-bin_2.48.4+dfsg-1_armhf.deb ...
Unpacking librsvg2-bin (2.48.4+dfsg-1) ...
Selecting previously unselected package libsqlite3-dev:armhf.
Preparing to unpack .../181-libsqlite3-dev_3.31.1-5_armhf.deb ...
Unpacking libsqlite3-dev:armhf (3.31.1-5) ...
Selecting previously unselected package libtinfo-dev:armhf.
Preparing to unpack .../182-libtinfo-dev_6.2-1_armhf.deb ...
Unpacking libtinfo-dev:armhf (6.2-1) ...
Selecting previously unselected package libwebpdemux2:armhf.
Preparing to unpack .../183-libwebpdemux2_0.6.1-2_armhf.deb ...
Unpacking libwebpdemux2:armhf (0.6.1-2) ...
Selecting previously unselected package libyaml-0-2:armhf.
Preparing to unpack .../184-libyaml-0-2_0.2.2-1_armhf.deb ...
Unpacking libyaml-0-2:armhf (0.2.2-1) ...
Selecting previously unselected package libz3-dev:armhf.
Preparing to unpack .../185-libz3-dev_4.8.7-4_armhf.deb ...
Unpacking libz3-dev:armhf (4.8.7-4) ...
Selecting previously unselected package llvm-10-runtime.
Preparing to unpack .../186-llvm-10-runtime_1%3a10.0.0-4+rpi1_armhf.deb ...
Unpacking llvm-10-runtime (1:10.0.0-4+rpi1) ...
Selecting previously unselected package llvm-10.
Preparing to unpack .../187-llvm-10_1%3a10.0.0-4+rpi1_armhf.deb ...
Unpacking llvm-10 (1:10.0.0-4+rpi1) ...
Selecting previously unselected package python3-pkg-resources.
Preparing to unpack .../188-python3-pkg-resources_46.1.3-1_all.deb ...
Unpacking python3-pkg-resources (46.1.3-1) ...
Selecting previously unselected package python3-pygments.
Preparing to unpack .../189-python3-pygments_2.3.1+dfsg-3_all.deb ...
Unpacking python3-pygments (2.3.1+dfsg-3) ...
Selecting previously unselected package python3-yaml.
Preparing to unpack .../190-python3-yaml_5.3.1-2_armhf.deb ...
Unpacking python3-yaml (5.3.1-2) ...
Selecting previously unselected package llvm-10-tools.
Preparing to unpack .../191-llvm-10-tools_1%3a10.0.0-4+rpi1_armhf.deb ...
Unpacking llvm-10-tools (1:10.0.0-4+rpi1) ...
Selecting previously unselected package llvm-10-dev.
Preparing to unpack .../192-llvm-10-dev_1%3a10.0.0-4+rpi1_armhf.deb ...
Unpacking llvm-10-dev (1:10.0.0-4+rpi1) ...
Selecting previously unselected package pandoc-data.
Preparing to unpack .../193-pandoc-data_2.5-3_all.deb ...
Unpacking pandoc-data (2.5-3) ...
Selecting previously unselected package pandoc.
Preparing to unpack .../194-pandoc_2.5-3+b1_armhf.deb ...
Unpacking pandoc (2.5-3+b1) ...
Selecting previously unselected package postgresql-client-common.
Preparing to unpack .../195-postgresql-client-common_215_all.deb ...
Unpacking postgresql-client-common (215) ...
Selecting previously unselected package postgresql-client-12.
Preparing to unpack .../196-postgresql-client-12_12.3-1_armhf.deb ...
Unpacking postgresql-client-12 (12.3-1) ...
Selecting previously unselected package ssl-cert.
Preparing to unpack .../197-ssl-cert_1.0.39_all.deb ...
Unpacking ssl-cert (1.0.39) ...
Selecting previously unselected package postgresql-common.
Preparing to unpack .../198-postgresql-common_215_all.deb ...
Adding 'diversion of /usr/bin/pg_config to /usr/bin/pg_config.libpq-dev by postgresql-common'
Unpacking postgresql-common (215) ...
Selecting previously unselected package postgresql-server-dev-12.
Preparing to unpack .../199-postgresql-server-dev-12_12.3-1_armhf.deb ...
Unpacking postgresql-server-dev-12 (12.3-1) ...
Selecting previously unselected package postgresql-server-dev-all.
Preparing to unpack .../200-postgresql-server-dev-all_215_all.deb ...
Unpacking postgresql-server-dev-all (215) ...
Selecting previously unselected package preview-latex-style.
Preparing to unpack .../201-preview-latex-style_11.91-2_all.deb ...
Unpacking preview-latex-style (11.91-2) ...
Selecting previously unselected package python-babel-localedata.
Preparing to unpack .../202-python-babel-localedata_2.8.0+dfsg.1-3_all.deb ...
Unpacking python-babel-localedata (2.8.0+dfsg.1-3) ...
Selecting previously unselected package python3-alabaster.
Preparing to unpack .../203-python3-alabaster_0.7.8-1.1_all.deb ...
Unpacking python3-alabaster (0.7.8-1.1) ...
Selecting previously unselected package python3-tz.
Preparing to unpack .../204-python3-tz_2019.3-2_all.deb ...
Unpacking python3-tz (2019.3-2) ...
Selecting previously unselected package python3-babel.
Preparing to unpack .../205-python3-babel_2.8.0+dfsg.1-3_all.deb ...
Unpacking python3-babel (2.8.0+dfsg.1-3) ...
Selecting previously unselected package python3-certifi.
Preparing to unpack .../206-python3-certifi_2020.4.5.1-1_all.deb ...
Unpacking python3-certifi (2020.4.5.1-1) ...
Selecting previously unselected package python3-chardet.
Preparing to unpack .../207-python3-chardet_3.0.4-7_all.deb ...
Unpacking python3-chardet (3.0.4-7) ...
Selecting previously unselected package python3-commonmark-bkrs.
Preparing to unpack .../208-python3-commonmark-bkrs_0.5.4+ds-4_all.deb ...
Unpacking python3-commonmark-bkrs (0.5.4+ds-4) ...
Selecting previously unselected package python3-six.
Preparing to unpack .../209-python3-six_1.14.0-3_all.deb ...
Unpacking python3-six (1.14.0-3) ...
Selecting previously unselected package python3-dateutil.
Preparing to unpack .../210-python3-dateutil_2.8.1-4_all.deb ...
Unpacking python3-dateutil (2.8.1-4) ...
Selecting previously unselected package python3-roman.
Preparing to unpack .../211-python3-roman_2.0.0-4_all.deb ...
Unpacking python3-roman (2.0.0-4) ...
Selecting previously unselected package python3-docutils.
Preparing to unpack .../212-python3-docutils_0.16+dfsg-2_all.deb ...
Unpacking python3-docutils (0.16+dfsg-2) ...
Selecting previously unselected package python3-idna.
Preparing to unpack .../213-python3-idna_2.9-1_all.deb ...
Unpacking python3-idna (2.9-1) ...
Selecting previously unselected package python3-imagesize.
Preparing to unpack .../214-python3-imagesize_1.2.0-2_all.deb ...
Unpacking python3-imagesize (1.2.0-2) ...
Selecting previously unselected package python3-markupsafe.
Preparing to unpack .../215-python3-markupsafe_1.1.1-1_armhf.deb ...
Unpacking python3-markupsafe (1.1.1-1) ...
Selecting previously unselected package python3-jinja2.
Preparing to unpack .../216-python3-jinja2_2.10.1-2_all.deb ...
Unpacking python3-jinja2 (2.10.1-2) ...
Selecting previously unselected package python3.7.
Preparing to unpack .../217-python3.7_3.7.7-1+b1_armhf.deb ...
Unpacking python3.7 (3.7.7-1+b1) ...
Selecting previously unselected package python3-numpy.
Preparing to unpack .../218-python3-numpy_1%3a1.17.4-5+b1_armhf.deb ...
Unpacking python3-numpy (1:1.17.4-5+b1) ...
Selecting previously unselected package python3-pyparsing.
Preparing to unpack .../219-python3-pyparsing_2.4.7-1_all.deb ...
Unpacking python3-pyparsing (2.4.7-1) ...
Selecting previously unselected package python3-packaging.
Preparing to unpack .../220-python3-packaging_20.3-1.2_all.deb ...
Unpacking python3-packaging (20.3-1.2) ...
Selecting previously unselected package python3-pandas-lib.
Preparing to unpack .../221-python3-pandas-lib_0.25.3+dfsg2-2+rpi1_armhf.deb ...
Unpacking python3-pandas-lib (0.25.3+dfsg2-2+rpi1) ...
Selecting previously unselected package python3-pandas.
Preparing to unpack .../222-python3-pandas_0.25.3+dfsg2-2+rpi1_all.deb ...
Unpacking python3-pandas (0.25.3+dfsg2-2+rpi1) ...
Selecting previously unselected package python3-pil:armhf.
Preparing to unpack .../223-python3-pil_7.0.0-4_armhf.deb ...
Unpacking python3-pil:armhf (7.0.0-4) ...
Selecting previously unselected package python3-recommonmark.
Preparing to unpack .../224-python3-recommonmark_0.4.0+ds-6_all.deb ...
Unpacking python3-recommonmark (0.4.0+ds-6) ...
Selecting previously unselected package python3-urllib3.
Preparing to unpack .../225-python3-urllib3_1.25.9-1_all.deb ...
Unpacking python3-urllib3 (1.25.9-1) ...
Selecting previously unselected package python3-requests.
Preparing to unpack .../226-python3-requests_2.23.0+dfsg-2_all.deb ...
Unpacking python3-requests (2.23.0+dfsg-2) ...
Selecting previously unselected package sphinx-common.
Preparing to unpack .../227-sphinx-common_2.4.3-2_all.deb ...
Unpacking sphinx-common (2.4.3-2) ...
Selecting previously unselected package python3-sphinx.
Preparing to unpack .../228-python3-sphinx_2.4.3-2_all.deb ...
Unpacking python3-sphinx (2.4.3-2) ...
Selecting previously unselected package rapidjson-dev.
Preparing to unpack .../229-rapidjson-dev_1.1.0+dfsg2-6_all.deb ...
Unpacking rapidjson-dev (1.1.0+dfsg2-6) ...
Selecting previously unselected package texlive-fonts-recommended.
Preparing to unpack .../230-texlive-fonts-recommended_2020.20200417-1_all.deb ...
Unpacking texlive-fonts-recommended (2020.20200417-1) ...
Selecting previously unselected package texlive-latex-recommended.
Preparing to unpack .../231-texlive-latex-recommended_2020.20200417-1_all.deb ...
Unpacking texlive-latex-recommended (2020.20200417-1) ...
Selecting previously unselected package texlive-pictures.
Preparing to unpack .../232-texlive-pictures_2020.20200417-1_all.deb ...
Unpacking texlive-pictures (2020.20200417-1) ...
Selecting previously unselected package texlive-latex-extra.
Preparing to unpack .../233-texlive-latex-extra_2020.20200417-1_all.deb ...
Unpacking texlive-latex-extra (2020.20200417-1) ...
Selecting previously unselected package sbuild-build-depends-rdkit-dummy.
Preparing to unpack .../234-sbuild-build-depends-rdkit-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-rdkit-dummy (0.invalid.0) ...
Setting up libboost1.67-dev:armhf (1.67.0-18) ...
Setting up postgresql-client-common (215) ...
Setting up libpipeline1:armhf (1.5.2-2) ...
Setting up libgraphite2-3:armhf (1.3.14-1) ...
Setting up liblcms2-2:armhf (2.9-4) ...
Setting up libpixman-1-0:armhf (0.36.0-1) ...
Setting up libxapian30:armhf (1.4.15-1) ...
Setting up libxau6:armhf (1:1.0.8-1+b2) ...
Setting up imagemagick-6-common (8:6.9.10.23+dfsg-2.1) ...
Setting up libkeyutils1:armhf (1.6.1-2) ...
Setting up libpsl5:armhf (0.21.0-1) ...
Setting up mime-support (3.64) ...
Setting up hicolor-icon-theme (0.17-2) ...
Setting up libdatrie1:armhf (0.2.12-3+b1) ...
Setting up libmagic-mgc (1:5.38-5) ...
Setting up libx265-179:armhf (3.2.1-1) ...
Setting up libtexlua53:armhf (2020.20200327.54578-4) ...
Setting up libarchive-zip-perl (1.68-1) ...
Setting up libgc1c2:armhf (1:7.6.4-0.4) ...
Setting up libyaml-0-2:armhf (0.2.2-1) ...
Setting up libglib2.0-0:armhf (2.64.2-1) ...
No schema files found: doing nothing.
Setting up libtexluajit2:armhf (2020.20200327.54578-4) ...
Setting up libdebhelper-perl (13) ...
Setting up libbrotli1:armhf (1.0.7-6.1) ...
Setting up libfontbox-java (1:1.8.16-2) ...
Setting up libgdk-pixbuf2.0-common (2.40.0+dfsg-4) ...
Setting up x11-common (1:7.7+20) ...
update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
invoke-rc.d: could not determine current runlevel
invoke-rc.d: policy-rc.d denied execution of start.
Setting up libnghttp2-14:armhf (1.40.0-1+b2) ...
Setting up libmagic1:armhf (1:5.38-5) ...
Setting up gettext-base (0.19.8.1-10) ...
Setting up libobjc4:armhf (10.1.0-1+rpi1) ...
Setting up libzzip-0-13:armhf (0.13.62-3.2) ...
Setting up libboost-date-time1.67.0:armhf (1.67.0-18) ...
Setting up file (1:5.38-5) ...
Setting up libffi-dev:armhf (3.3-4) ...
Setting up libpython3.7-minimal:armhf (3.7.7-1+b1) ...
Setting up libjbig0:armhf (2.1-3.1+b2) ...
Setting up libicu63:armhf (63.2-3) ...
Setting up python-babel-localedata (2.8.0+dfsg.1-3) ...
Setting up rapidjson-dev (1.1.0+dfsg2-6) ...
Setting up libkrb5support0:armhf (1.17-7+rpi1) ...
Setting up libpython2.7-stdlib:armhf (2.7.18-1) ...
Setting up autotools-dev (20180224.1) ...
Setting up libz3-4:armhf (4.8.7-4) ...
Setting up libblas3:armhf (3.9.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
Setting up libuv1:armhf (1.35.0-2) ...
Setting up libpfm4:armhf (4.10.1+git44-ga2909cd-1) ...
Setting up libexpat1-dev:armhf (2.2.9-1) ...
Setting up libjpeg62-turbo:armhf (1:1.5.2-2+b1) ...
Setting up libsqlite3-dev:armhf (3.31.1-5) ...
Setting up libx11-data (2:1.6.9-2) ...
Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b1) ...
Setting up libteckit0:armhf (2.5.8+ds2-5) ...
Setting up libapache-pom-java (18-1) ...
Setting up libncurses6:armhf (6.2-1) ...
Setting up libsigsegv2:armhf (2.12-2) ...
Setting up libfribidi0:armhf (1.0.8-2) ...
Setting up t1utils (1.41-4) ...
Setting up libimagequant0:armhf (2.12.2-1.1) ...
Setting up libpng16-16:armhf (1.6.37-2) ...
Setting up autopoint (0.19.8.1-10) ...
Setting up binfmt-support (2.2.1-1) ...
invoke-rc.d: could not determine current runlevel
invoke-rc.d: policy-rc.d denied execution of start.
Setting up libwebp6:armhf (0.6.1-2) ...
Setting up icu-devtools (63.2-3) ...
Setting up fonts-dejavu-core (2.37-1) ...
Setting up libboost-iostreams1.67.0:armhf (1.67.0-18) ...
Setting up libk5crypto3:armhf (1.17-7+rpi1) ...
Setting up libobjc-9-dev:armhf (9.3.0-12+rpi1) ...
Setting up libltdl7:armhf (2.4.6-14) ...
Setting up libfftw3-double3:armhf (3.3.8-2) ...
Setting up python3.7-minimal (3.7.7-1+b1) ...
Setting up libkpathsea6:armhf (2020.20200327.54578-4) ...
Setting up libgfortran5:armhf (10.1.0-1+rpi1) ...
Setting up zlib1g-dev:armhf (1:1.2.11.dfsg-2) ...
Setting up libcoordgen1:armhf (1.4.0-2) ...
Setting up liblqr-1-0:armhf (0.4.2-2.1) ...
Setting up sensible-utils (0.0.12+nmu1) ...
Setting up librhash0:armhf (1.3.9-1) ...
Setting up libuchardet0:armhf (0.0.6-3) ...
Setting up libboost-python1.67.0 (1.67.0-18) ...
Setting up fonts-lmodern (2.004.5-6) ...
Setting up libopenjp2-7:armhf (2.3.1-1) ...
Setting up libsub-override-perl (0.09-2) ...
Setting up libthai-data (0.1.28-3) ...
Setting up libssh2-1:armhf (1.8.0-2.1) ...
Setting up libboost-atomic1.67.0:armhf (1.67.0-18) ...
Setting up sgml-base (1.30) ...
Setting up cmake-data (3.16.3-3+rpi1) ...
Setting up libkrb5-3:armhf (1.17-7+rpi1) ...
Setting up libboost-dev:armhf (1.67.0.2+b11) ...
Setting up libtiff5:armhf (4.1.0+git191117-2) ...
Setting up libmpdec2:armhf (2.4.2-3) ...
Setting up pandoc-data (2.5-3) ...
Setting up libcoordgen-dev:armhf (1.4.0-2) ...
Setting up libboost-system1.67.0:armhf (1.67.0-18) ...
Setting up libpython3.8-stdlib:armhf (3.8.3-1) ...
Setting up libde265-0:armhf (1.0.4-1+rpi1) ...
Setting up python3.8 (3.8.3-1) ...
Setting up libboost-serialization1.67.0:armhf (1.67.0-18) ...
Setting up openssl (1.1.1g-1) ...
Setting up libwebpmux3:armhf (0.6.1-2) ...
Setting up libbsd0:armhf (0.10.0-1) ...
Setting up libtinfo5:armhf (6.2-1) ...
Setting up libelf1:armhf (0.176-1.1) ...
Setting up libicu-dev:armhf (63.2-3) ...
Setting up libxml2:armhf (2.9.10+dfsg-5) ...
Setting up xdg-utils (1.1.3-2) ...
Setting up libprocps8:armhf (2:3.3.16-5) ...
Setting up node-jquery (3.5.1+dfsg-3) ...
Setting up libjsoncpp1:armhf (1.7.4-3.1) ...
Setting up libsynctex2:armhf (2020.20200327.54578-4) ...
Setting up libpython3-stdlib:armhf (3.8.2-3) ...
Setting up libjs-underscore (1.9.1~dfsg-1) ...
Setting up libboost-atomic1.67-dev:armhf (1.67.0-18) ...
Setting up libfile-stripnondeterminism-perl (1.8.0-1) ...
Setting up libboost-serialization1.67-dev:armhf (1.67.0-18) ...
Setting up libz3-dev:armhf (4.8.7-4) ...
Setting up libice6:armhf (2:1.0.9-2) ...
Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up libpython3.7-stdlib:armhf (3.7.7-1+b1) ...
Setting up libpython2.7:armhf (2.7.18-1) ...
Setting up liblapack3:armhf (3.9.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up libpython2.7-dev:armhf (2.7.18-1) ...
Setting up libncurses-dev:armhf (6.2-1) ...
Setting up libxcb1:armhf (1.14-2) ...
Setting up libboost-regex1.67.0:armhf (1.67.0-18) ...
Setting up libboost-chrono1.67.0:armhf (1.67.0-18) ...
Setting up libpdfbox-java (1:1.8.16-2) ...
Setting up python2.7 (2.7.18-1) ...
Setting up libboost-thread1.67.0:armhf (1.67.0-18) ...
Setting up libtool (2.4.6-14) ...
Setting up libpython2-stdlib:armhf (2.7.17-2) ...
Setting up libarchive13:armhf (3.4.2-1) ...
Setting up libxcb-render0:armhf (1.14-2) ...
Setting up libboost-regex1.67-dev:armhf (1.67.0-18) ...
Setting up libwebpdemux2:armhf (0.6.1-2) ...
Setting up libedit2:armhf (3.1-20191231-1) ...
Setting up libheif1:armhf (1.6.1-1) ...
Setting up libcommons-parent-java (43-1) ...
Setting up libcommons-logging-java (1.2-2) ...
Setting up m4 (1.4.18-4) ...
Setting up python3 (3.8.2-3) ...
Setting up libxcb-shm0:armhf (1.14-2) ...
Setting up python3-markupsafe (1.1.1-1) ...
Setting up python2 (2.7.17-2) ...
Setting up python3-tz (2019.3-2) ...
Setting up libmaeparser1:armhf (1.2.3-3) ...
Setting up libllvm10:armhf (1:10.0.0-4+rpi1) ...
Setting up python3-six (1.14.0-3) ...
Setting up libthai0:armhf (0.1.28-3) ...
Setting up ca-certificates (20190110) ...
Updating certificates in /etc/ssl/certs...
128 added, 0 removed; done.
Setting up libpython-stdlib:armhf (2.7.17-2) ...
Setting up python3-roman (2.0.0-4) ...
Setting up libboost-date-time1.67-dev:armhf (1.67.0-18) ...
Setting up libboost-chrono1.67-dev:armhf (1.67.0-18) ...
Setting up python3-jinja2 (2.10.1-2) ...
Setting up libptexenc1:armhf (2020.20200327.54578-4) ...
Setting up pandoc (2.5-3+b1) ...
Setting up python3-pyparsing (2.4.7-1) ...
Setting up libfreetype6:armhf (2.10.1-2) ...
Setting up python3-certifi (2020.4.5.1-1) ...
Setting up ssl-cert (1.0.39) ...
Setting up libclang1-10 (1:10.0.0-4+rpi1) ...
Setting up libpython3.8:armhf (3.8.3-1) ...
Setting up shared-mime-info (1.15-1) ...
Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up libgssapi-krb5-2:armhf (1.17-7+rpi1) ...
Setting up python3-idna (2.9-1) ...
Setting up libcroco3:armhf (0.6.13-1) ...
Setting up ucf (3.0038+nmu1) ...
Setting up autoconf (2.69-11.1) ...
Setting up python3-urllib3 (1.25.9-1) ...
Setting up dh-strip-nondeterminism (1.8.0-1) ...
Setting up dwz (0.13-5) ...
Setting up python3-commonmark-bkrs (0.5.4+ds-4) ...
Setting up groff-base (1.22.4-5) ...
Setting up xml-core (0.18+nmu1) ...
Setting up procps (2:3.3.16-5) ...
update-alternatives: using /usr/bin/w.procps to provide /usr/bin/w (w) in auto mode
Setting up bison (2:3.6.1+dfsg-2) ...
update-alternatives: using /usr/bin/bison.yacc to provide /usr/bin/yacc (yacc) in auto mode
Setting up libcurl4:armhf (7.68.0-1) ...
Setting up libx11-6:armhf (2:1.6.9-2) ...
Setting up libharfbuzz0b:armhf (2.6.4-1+rpi1) ...
Setting up python3-dateutil (2.8.1-4) ...
Setting up libpython2-dev:armhf (2.7.17-2) ...
Setting up libboost-system1.67-dev:armhf (1.67.0-18) ...
Setting up libjs-jquery (3.5.1+dfsg-3) ...
Setting up libboost-regex-dev:armhf (1.67.0.2+b11) ...
Setting up python3-lib2to3 (3.8.2-2) ...
Setting up libsm6:armhf (2:1.2.3-1) ...
Setting up python (2.7.17-2) ...
Setting up libboost-iostreams1.67-dev:armhf (1.67.0-18) ...
Setting up libllvm9:armhf (1:9.0.1-12+rpi1) ...
Setting up python3-imagesize (1.2.0-2) ...
Setting up python2.7-dev (2.7.18-1) ...
Setting up python3-pkg-resources (46.1.3-1) ...
Setting up libmaeparser-dev:armhf (1.2.3-3) ...
Setting up automake (1:1.16.2-1) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up python3-distutils (3.8.2-2) ...
Setting up dh-python (4.20200315) ...
Setting up libtinfo-dev:armhf (6.2-1) ...
Setting up libpaper1:armhf (1.1.28) ...

Creating config file /etc/papersize with new version
Setting up python3.7 (3.7.7-1+b1) ...
Setting up flex (2.6.4-6.2) ...
Setting up gettext (0.19.8.1-10) ...
Setting up python2-dev (2.7.17-2) ...
Setting up libxpm4:armhf (1:3.5.12-1) ...
Setting up libxrender1:armhf (1:0.9.10-1) ...
Setting up python3-babel (2.8.0+dfsg.1-3) ...
update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode
Setting up libboost-thread1.67-dev:armhf (1.67.0-18) ...
Setting up libclang-common-10-dev (1:10.0.0-4+rpi1) ...
Setting up libclang1-9 (1:9.0.1-12+rpi1) ...
Setting up fontconfig-config (2.13.1-4.2) ...
Setting up python3-alabaster (0.7.8-1.1) ...
Setting up libboost-system-dev:armhf (1.67.0.2+b11) ...
Setting up libpq5:armhf (12.3-1) ...
Setting up libxext6:armhf (2:1.3.3-1+b2) ...
Setting up python3-yaml (5.3.1-2) ...
Setting up libpq-dev (12.3-1) ...
Setting up libpaper-utils (1.1.28) ...
Setting up libboost-iostreams-dev:armhf (1.67.0.2+b11) ...
Setting up man-db (2.9.1-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libclang-cpp10 (1:10.0.0-4+rpi1) ...
Setting up llvm-10-runtime (1:10.0.0-4+rpi1) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up libpython-dev:armhf (2.7.17-2) ...
Setting up tex-common (6.14) ...
update-language: texlive-base not installed and configured, doing nothing!
Setting up python3-pil:armhf (7.0.0-4) ...
Setting up python3-pygments (2.3.1+dfsg-3) ...
Setting up postgresql-client-12 (12.3-1) ...
update-alternatives: using /usr/share/postgresql/12/man/man1/psql.1.gz to provide /usr/share/man/man1/psql.1.gz (psql.1.gz) in auto mode
Setting up doxygen (1.8.17-1) ...
Setting up python3-packaging (20.3-1.2) ...
Setting up python3-chardet (3.0.4-7) ...
Setting up libpython3.8-dev:armhf (3.8.3-1) ...
Setting up libgdk-pixbuf2.0-0:armhf (2.40.0+dfsg-4) ...
Setting up python3-requests (2.23.0+dfsg-2) ...
Setting up postgresql-common (215) ...
supported-versions: WARNING! Unknown distribution: raspbian
debian found in ID_LIKE, treating as Debian
Adding user postgres to group ssl-cert

Creating config file /etc/postgresql-common/createcluster.conf with new version
Building PostgreSQL dictionaries from installed myspell/hunspell packages...
Removing obsolete dictionary files:
invoke-rc.d: could not determine current runlevel
invoke-rc.d: policy-rc.d denied execution of start.
Setting up libxt6:armhf (1:1.1.5-1+b3) ...
Setting up python3-numpy (1:1.17.4-5+b1) ...
Setting up libjs-sphinxdoc (2.4.3-2) ...
Setting up python3.8-dev (3.8.3-1) ...
Setting up cmake (3.16.3-3+rpi1) ...
Setting up clang-10 (1:10.0.0-4+rpi1) ...
Setting up libfontconfig1:armhf (2.13.1-4.2) ...
Setting up libboost-thread-dev:armhf (1.67.0.2+b11) ...
Setting up python-dev (2.7.17-2) ...
Setting up fontconfig (2.13.1-4.2) ...
Regenerating fonts cache... done.
Setting up libxmu6:armhf (2:1.1.2-2+b3) ...
Setting up llvm-10-tools (1:10.0.0-4+rpi1) ...
Setting up libpython3-dev:armhf (3.8.2-3) ...
Setting up libxi6:armhf (2:1.7.9-1) ...
Setting up po-debconf (1.0.21) ...
Setting up preview-latex-style (11.91-2) ...
Setting up python3-pandas-lib (0.25.3+dfsg2-2+rpi1) ...
Setting up llvm-10 (1:10.0.0-4+rpi1) ...
Setting up libpango-1.0-0:armhf (1.44.7-4) ...
Setting up libxaw7:armhf (2:1.0.13-1+b2) ...
Setting up libcairo2:armhf (1.16.0-4) ...
Setting up llvm-10-dev (1:10.0.0-4+rpi1) ...
Setting up libmagickcore-6.q16-6:armhf (8:6.9.10.23+dfsg-2.1+b2) ...
Setting up python3-pandas (0.25.3+dfsg2-2+rpi1) ...
Setting up sphinx-common (2.4.3-2) ...
Setting up python3-dev (3.8.2-3) ...
Setting up texlive-binaries (2020.20200327.54578-4) ...
update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode
update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode
Setting up libmagickwand-6.q16-6:armhf (8:6.9.10.23+dfsg-2.1+b2) ...
Setting up libpangoft2-1.0-0:armhf (1.44.7-4) ...
Setting up libboost-python1.67-dev (1.67.0-18) ...
Setting up postgresql-server-dev-12 (12.3-1) ...
Setting up texlive-base (2020.20200417-1) ...
tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps
tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg
tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper
tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/config/pdftexconfig.tex
Setting up libpangocairo-1.0-0:armhf (1.44.7-4) ...
Setting up libboost-python-dev (1.67.0.2+b11) ...
Setting up librsvg2-2:armhf (2.48.4+dfsg-1) ...
Setting up texlive-latex-base (2020.20200417-1) ...
Setting up texlive-latex-recommended (2020.20200417-1) ...
Setting up texlive-pictures (2020.20200417-1) ...
Setting up imagemagick-6.q16 (8:6.9.10.23+dfsg-2.1+b2) ...
update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare (compare) in auto mode
update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare-im6 (compare-im6) in auto mode
update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate (animate) in auto mode
update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate-im6 (animate-im6) in auto mode
update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert (convert) in auto mode
update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert-im6 (convert-im6) in auto mode
update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite (composite) in auto mode
update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite-im6 (composite-im6) in auto mode
update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure (conjure) in auto mode
update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure-im6 (conjure-im6) in auto mode
update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import (import) in auto mode
update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import-im6 (import-im6) in auto mode
update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify (identify) in auto mode
update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify-im6 (identify-im6) in auto mode
update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream (stream) in auto mode
update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream-im6 (stream-im6) in auto mode
update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display (display) in auto mode
update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display-im6 (display-im6) in auto mode
update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage (montage) in auto mode
update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage-im6 (montage-im6) in auto mode
update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify (mogrify) in auto mode
update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify-im6 (mogrify-im6) in auto mode
Setting up texlive-fonts-recommended (2020.20200417-1) ...
Setting up postgresql-server-dev-all (215) ...
Setting up librsvg2-bin (2.48.4+dfsg-1) ...
Setting up latexmk (1:4.69a-0.1) ...
Setting up texlive-latex-extra (2020.20200417-1) ...
Setting up imagemagick (8:6.9.10.23+dfsg-2.1+b2) ...
Setting up dh-autoreconf (19) ...
Setting up debhelper (13) ...
Processing triggers for libc-bin (2.30-8+rpi1) ...
Processing triggers for sgml-base (1.30) ...
Setting up docutils-common (0.16+dfsg-2) ...
Processing triggers for sgml-base (1.30) ...
Setting up python3-docutils (0.16+dfsg-2) ...
update-alternatives: using /usr/share/docutils/scripts/python3/rst-buildhtml to provide /usr/bin/rst-buildhtml (rst-buildhtml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2html to provide /usr/bin/rst2html (rst2html) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2html4 to provide /usr/bin/rst2html4 (rst2html4) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2html5 to provide /usr/bin/rst2html5 (rst2html5) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2latex to provide /usr/bin/rst2latex (rst2latex) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2man to provide /usr/bin/rst2man (rst2man) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt to provide /usr/bin/rst2odt (rst2odt) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt_prepstyles to provide /usr/bin/rst2odt_prepstyles (rst2odt_prepstyles) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2pseudoxml to provide /usr/bin/rst2pseudoxml (rst2pseudoxml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2s5 to provide /usr/bin/rst2s5 (rst2s5) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2xetex to provide /usr/bin/rst2xetex (rst2xetex) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2xml to provide /usr/bin/rst2xml (rst2xml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rstpep2html to provide /usr/bin/rstpep2html (rstpep2html) in auto mode
Setting up python3-recommonmark (0.4.0+ds-6) ...
Setting up python3-sphinx (2.4.3-2) ...
update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-apidoc to provide /usr/bin/sphinx-apidoc (sphinx-apidoc) in auto mode
update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-autogen to provide /usr/bin/sphinx-autogen (sphinx-autogen) in auto mode
update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-build to provide /usr/bin/sphinx-build (sphinx-build) in auto mode
update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-quickstart to provide /usr/bin/sphinx-quickstart (sphinx-quickstart) in auto mode
Setting up sbuild-build-depends-rdkit-dummy (0.invalid.0) ...
Processing triggers for ca-certificates (20190110) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
Processing triggers for tex-common (6.14) ...
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Building format(s) --all.
	This may take some time... done.
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.15.0-76-generic armhf (armv8l)
Toolchain package versions: binutils_2.34-8+rpi1 dpkg-dev_1.19.7 g++-9_9.3.0-12+rpi1 gcc-9_9.3.0-12+rpi1 libc6-dev_2.30-8+rpi1 libstdc++-9-dev_9.3.0-12+rpi1 libstdc++6_10.1.0-1+rpi1 linux-libc-dev_5.2.17-1+rpi1+b2
Package versions: adduser_3.118 apt_2.1.4 autoconf_2.69-11.1 automake_1:1.16.2-1 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11+rpi1 base-passwd_3.5.47 bash_5.0-6 binfmt-support_2.2.1-1 binutils_2.34-8+rpi1 binutils-arm-linux-gnueabihf_2.34-8+rpi1 binutils-common_2.34-8+rpi1 bison_2:3.6.1+dfsg-2 bsdmainutils_11.1.2 bsdutils_1:2.35.1-5 build-essential_12.8 bzip2_1.0.8-2 ca-certificates_20190110 clang-10_1:10.0.0-4+rpi1 cmake_3.16.3-3+rpi1 cmake-data_3.16.3-3+rpi1 coreutils_8.30-3 cpp_4:9.2.1-3.1+rpi1 cpp-9_9.3.0-12+rpi1 dash_0.5.10.2-7 debconf_1.5.74 debhelper_13 debianutils_4.9.1 dh-autoreconf_19 dh-python_4.20200315 dh-strip-nondeterminism_1.8.0-1 diffutils_1:3.7-3 dirmngr_2.2.20-1 docutils-common_0.16+dfsg-2 doxygen_1.8.17-1 dpkg_1.19.7 dpkg-dev_1.19.7 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.24-1 fdisk_2.35.1-5 file_1:5.38-5 findutils_4.7.0-1 flex_2.6.4-6.2 fontconfig_2.13.1-4.2 fontconfig-config_2.13.1-4.2 fonts-dejavu-core_2.37-1 fonts-lmodern_2.004.5-6 g++_4:9.2.1-3.1+rpi1 g++-9_9.3.0-12+rpi1 gcc_4:9.2.1-3.1+rpi1 gcc-10-base_10.1.0-1+rpi1 gcc-9_9.3.0-12+rpi1 gcc-9-base_9.3.0-12+rpi1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gnupg_2.2.20-1 gnupg-l10n_2.2.20-1 gnupg-utils_2.2.20-1 gpg_2.2.20-1 gpg-agent_2.2.20-1 gpg-wks-client_2.2.20-1 gpg-wks-server_2.2.20-1 gpgconf_2.2.20-1 gpgsm_2.2.20-1 gpgv_2.2.20-1 grep_3.4-1 groff-base_1.22.4-5 gzip_1.10-2 hicolor-icon-theme_0.17-2 hostname_3.23 icu-devtools_63.2-3 imagemagick_8:6.9.10.23+dfsg-2.1+b2 imagemagick-6-common_8:6.9.10.23+dfsg-2.1 imagemagick-6.q16_8:6.9.10.23+dfsg-2.1+b2 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 iputils-ping_3:20190709-3 latexmk_1:4.69a-0.1 libacl1_2.2.53-8 libapache-pom-java_18-1 libapt-pkg6.0_2.1.4 libarchive-zip-perl_1.68-1 libarchive13_3.4.2-1 libasan5_9.3.0-12+rpi1 libassuan0_2.5.3-7 libatomic1_10.1.0-1+rpi1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3 libaudit1_1:2.8.5-3 libbinutils_2.34-8+rpi1 libblas3_3.9.0-2 libblkid1_2.35.1-5 libboost-atomic1.67-dev_1.67.0-18 libboost-atomic1.67.0_1.67.0-18 libboost-chrono1.67-dev_1.67.0-18 libboost-chrono1.67.0_1.67.0-18 libboost-date-time1.67-dev_1.67.0-18 libboost-date-time1.67.0_1.67.0-18 libboost-dev_1.67.0.2+b11 libboost-iostreams-dev_1.67.0.2+b11 libboost-iostreams1.67-dev_1.67.0-18 libboost-iostreams1.67.0_1.67.0-18 libboost-python-dev_1.67.0.2+b11 libboost-python1.67-dev_1.67.0-18 libboost-python1.67.0_1.67.0-18 libboost-regex-dev_1.67.0.2+b11 libboost-regex1.67-dev_1.67.0-18 libboost-regex1.67.0_1.67.0-18 libboost-serialization1.67-dev_1.67.0-18 libboost-serialization1.67.0_1.67.0-18 libboost-system-dev_1.67.0.2+b11 libboost-system1.67-dev_1.67.0-18 libboost-system1.67.0_1.67.0-18 libboost-thread-dev_1.67.0.2+b11 libboost-thread1.67-dev_1.67.0-18 libboost-thread1.67.0_1.67.0-18 libboost1.67-dev_1.67.0-18 libbrotli1_1.0.7-6.1 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libc-bin_2.30-8+rpi1 libc-dev-bin_2.30-8+rpi1 libc6_2.30-8+rpi1 libc6-dev_2.30-8+rpi1 libcairo2_1.16.0-4 libcap-ng0_0.7.9-2.1+b1 libcap2_1:2.34-2 libcap2-bin_1:2.34-2 libcc1-0_10.1.0-1+rpi1 libclang-common-10-dev_1:10.0.0-4+rpi1 libclang-cpp10_1:10.0.0-4+rpi1 libclang1-10_1:10.0.0-4+rpi1 libclang1-9_1:9.0.1-12+rpi1 libcom-err2_1.45.6-1 libcommons-logging-java_1.2-2 libcommons-parent-java_43-1 libcoordgen-dev_1.4.0-2 libcoordgen1_1.4.0-2 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.16-1 libcrypt1_1:4.4.16-1 libctf-nobfd0_2.34-8+rpi1 libctf0_2.34-8+rpi1 libcurl4_7.68.0-1 libdatrie1_0.2.12-3+b1 libdb5.3_5.3.28+dfsg1-0.6 libde265-0_1.0.4-1+rpi1 libdebconfclient0_0.252 libdebhelper-perl_13 libdpkg-perl_1.19.7 libedit2_3.1-20191231-1 libelf1_0.176-1.1 libexpat1_2.2.9-1 libexpat1-dev_2.2.9-1 libext2fs2_1.45.6-1 libfakeroot_1.24-1 libfdisk1_2.35.1-5 libffi-dev_3.3-4 libffi7_3.3-4 libfftw3-double3_3.3.8-2 libfile-stripnondeterminism-perl_1.8.0-1 libfontbox-java_1:1.8.16-2 libfontconfig1_2.13.1-4.2 libfreetype6_2.10.1-2 libfribidi0_1.0.8-2 libgc1c2_1:7.6.4-0.4 libgcc-9-dev_9.3.0-12+rpi1 libgcc-s1_10.1.0-1+rpi1 libgcc1_1:10.1.0-1+rpi1 libgcrypt20_1.8.5-5 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libgdk-pixbuf2.0-0_2.40.0+dfsg-4 libgdk-pixbuf2.0-common_2.40.0+dfsg-4 libgfortran5_10.1.0-1+rpi1 libglib2.0-0_2.64.2-1 libgmp10_2:6.2.0+dfsg-4 libgnutls30_3.6.13-2 libgomp1_10.1.0-1+rpi1 libgpg-error0_1.37-1 libgraphite2-3_1.3.14-1 libgssapi-krb5-2_1.17-7+rpi1 libharfbuzz0b_2.6.4-1+rpi1 libheif1_1.6.1-1 libhogweed5_3.5.1+really3.5.1-2 libice6_2:1.0.9-2 libicu-dev_63.2-3 libicu63_63.2-3 libidn2-0_2.3.0-1 libimagequant0_2.12.2-1.1 libisl22_0.22.1-1 libjbig0_2.1-3.1+b2 libjpeg62-turbo_1:1.5.2-2+b1 libjs-jquery_3.5.1+dfsg-3 libjs-sphinxdoc_2.4.3-2 libjs-underscore_1.9.1~dfsg-1 libjsoncpp1_1.7.4-3.1 libk5crypto3_1.17-7+rpi1 libkeyutils1_1.6.1-2 libkpathsea6_2020.20200327.54578-4 libkrb5-3_1.17-7+rpi1 libkrb5support0_1.17-7+rpi1 libksba8_1.3.5-2 liblapack3_3.9.0-2 liblcms2-2_2.9-4 libldap-2.4-2_2.4.50+dfsg-1 libldap-common_2.4.50+dfsg-1 libllvm10_1:10.0.0-4+rpi1 libllvm9_1:9.0.1-12+rpi1 liblqr-1-0_0.4.2-2.1 libltdl7_2.4.6-14 liblz4-1_1.9.2-2 liblzma5_5.2.4-1 libmaeparser-dev_1.2.3-3 libmaeparser1_1.2.3-3 libmagic-mgc_1:5.38-5 libmagic1_1:5.38-5 libmagickcore-6.q16-6_8:6.9.10.23+dfsg-2.1+b2 libmagickwand-6.q16-6_8:6.9.10.23+dfsg-2.1+b2 libmount1_2.35.1-5 libmpc3_1.1.0-1 libmpdec2_2.4.2-3 libmpfr6_4.0.2-1 libncurses-dev_6.2-1 libncurses6_6.2-1 libncursesw6_6.2-1 libnettle7_3.5.1+really3.5.1-2 libnghttp2-14_1.40.0-1+b2 libnpth0_1.6-1 libobjc-9-dev_9.3.0-12+rpi1 libobjc4_10.1.0-1+rpi1 libopenjp2-7_2.3.1-1 libp11-kit0_0.23.20-1 libpam-cap_1:2.34-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpango-1.0-0_1.44.7-4 libpangocairo-1.0-0_1.44.7-4 libpangoft2-1.0-0_1.44.7-4 libpaper-utils_1.1.28 libpaper1_1.1.28 libpcre2-8-0_10.34-7 libpcre3_2:8.39-12 libpdfbox-java_1:1.8.16-2 libperl5.30_5.30.0-10 libpfm4_4.10.1+git44-ga2909cd-1 libpipeline1_1.5.2-2 libpixman-1-0_0.36.0-1 libpng16-16_1.6.37-2 libpq-dev_12.3-1 libpq5_12.3-1 libprocps8_2:3.3.16-5 libpsl5_0.21.0-1 libptexenc1_2020.20200327.54578-4 libpython-dev_2.7.17-2 libpython-stdlib_2.7.17-2 libpython2-dev_2.7.17-2 libpython2-stdlib_2.7.17-2 libpython2.7_2.7.18-1 libpython2.7-dev_2.7.18-1 libpython2.7-minimal_2.7.18-1 libpython2.7-stdlib_2.7.18-1 libpython3-dev_3.8.2-3 libpython3-stdlib_3.8.2-3 libpython3.7-minimal_3.7.7-1+b1 libpython3.7-stdlib_3.7.7-1+b1 libpython3.8_3.8.3-1 libpython3.8-dev_3.8.3-1 libpython3.8-minimal_3.8.3-1 libpython3.8-stdlib_3.8.3-1 libreadline7_7.0-5 libreadline8_8.0-4 librhash0_1.3.9-1 librsvg2-2_2.48.4+dfsg-1 librsvg2-bin_2.48.4+dfsg-1 librtmp1_2.4+20151223.gitfa8646d.1-2+b1 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.4.3-1+rpi1 libselinux1_3.0-1+b1 libsemanage-common_3.0-1 libsemanage1_3.0-1+b1 libsepol1_3.0-1 libsigsegv2_2.12-2 libsm6_2:1.2.3-1 libsmartcols1_2.35.1-5 libsqlite3-0_3.31.1-5 libsqlite3-dev_3.31.1-5 libss2_1.45.6-1 libssh2-1_1.8.0-2.1 libssl1.1_1.1.1g-1 libstdc++-9-dev_9.3.0-12+rpi1 libstdc++6_10.1.0-1+rpi1 libsub-override-perl_0.09-2 libsynctex2_2020.20200327.54578-4 libsystemd0_245.5-3+rpi1 libtasn1-6_4.16.0-2 libteckit0_2.5.8+ds2-5 libtexlua53_2020.20200327.54578-4 libtexluajit2_2020.20200327.54578-4 libthai-data_0.1.28-3 libthai0_0.1.28-3 libtiff5_4.1.0+git191117-2 libtinfo-dev_6.2-1 libtinfo5_6.2-1 libtinfo6_6.2-1 libtool_2.4.6-14 libubsan1_10.1.0-1+rpi1 libuchardet0_0.0.6-3 libudev1_245.5-3+rpi1 libunistring2_0.9.10-2 libuuid1_2.35.1-5 libuv1_1.35.0-2 libwebp6_0.6.1-2 libwebpdemux2_0.6.1-2 libwebpmux3_0.6.1-2 libx11-6_2:1.6.9-2 libx11-data_2:1.6.9-2 libx265-179_3.2.1-1 libxapian30_1.4.15-1 libxau6_1:1.0.8-1+b2 libxaw7_2:1.0.13-1+b2 libxcb-render0_1.14-2 libxcb-shm0_1.14-2 libxcb1_1.14-2 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1+b2 libxi6_2:1.7.9-1 libxml2_2.9.10+dfsg-5 libxmu6_2:1.1.2-2+b3 libxpm4_1:3.5.12-1 libxrender1_1:0.9.10-1 libxt6_1:1.1.5-1+b3 libyaml-0-2_0.2.2-1 libz3-4_4.8.7-4 libz3-dev_4.8.7-4 libzstd1_1.4.4+dfsg-3+rpi1 libzzip-0-13_0.13.62-3.2 linux-libc-dev_5.2.17-1+rpi1+b2 llvm-10_1:10.0.0-4+rpi1 llvm-10-dev_1:10.0.0-4+rpi1 llvm-10-runtime_1:10.0.0-4+rpi1 llvm-10-tools_1:10.0.0-4+rpi1 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0+rpi1 m4_1.4.18-4 make_4.2.1-2 man-db_2.9.1-1 mawk_1.3.4.20200120-2 mime-support_3.64 mount_2.35.1-5 ncurses-base_6.2-1 ncurses-bin_6.2-1 netbase_6.1 node-jquery_3.5.1+dfsg-3 openssl_1.1.1g-1 pandoc_2.5-3+b1 pandoc-data_2.5-3 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.30.0-10 perl-base_5.30.0-10 perl-modules-5.30_5.30.0-10 pinentry-curses_1.1.0-4 po-debconf_1.0.21 postgresql-client-12_12.3-1 postgresql-client-common_215 postgresql-common_215 postgresql-server-dev-12_12.3-1 postgresql-server-dev-all_215 preview-latex-style_11.91-2 procps_2:3.3.16-5 python_2.7.17-2 python-babel-localedata_2.8.0+dfsg.1-3 python-dev_2.7.17-2 python-minimal_2.7.17-2 python2_2.7.17-2 python2-dev_2.7.17-2 python2-minimal_2.7.17-2 python2.7_2.7.18-1 python2.7-dev_2.7.18-1 python2.7-minimal_2.7.18-1 python3_3.8.2-3 python3-alabaster_0.7.8-1.1 python3-babel_2.8.0+dfsg.1-3 python3-certifi_2020.4.5.1-1 python3-chardet_3.0.4-7 python3-commonmark-bkrs_0.5.4+ds-4 python3-dateutil_2.8.1-4 python3-dev_3.8.2-3 python3-distutils_3.8.2-2 python3-docutils_0.16+dfsg-2 python3-idna_2.9-1 python3-imagesize_1.2.0-2 python3-jinja2_2.10.1-2 python3-lib2to3_3.8.2-2 python3-markupsafe_1.1.1-1 python3-minimal_3.8.2-3 python3-numpy_1:1.17.4-5+b1 python3-packaging_20.3-1.2 python3-pandas_0.25.3+dfsg2-2+rpi1 python3-pandas-lib_0.25.3+dfsg2-2+rpi1 python3-pil_7.0.0-4 python3-pkg-resources_46.1.3-1 python3-pygments_2.3.1+dfsg-3 python3-pyparsing_2.4.7-1 python3-recommonmark_0.4.0+ds-6 python3-requests_2.23.0+dfsg-2 python3-roman_2.0.0-4 python3-six_1.14.0-3 python3-sphinx_2.4.3-2 python3-tz_2019.3-2 python3-urllib3_1.25.9-1 python3-yaml_5.3.1-2 python3.7_3.7.7-1+b1 python3.7-minimal_3.7.7-1+b1 python3.8_3.8.3-1 python3.8-dev_3.8.3-1 python3.8-minimal_3.8.3-1 rapidjson-dev_1.1.0+dfsg2-6 raspbian-archive-keyring_20120528.2 readline-common_8.0-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-rdkit-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sgml-base_1.30 shared-mime-info_1.15-1 sphinx-common_2.4.3-2 ssl-cert_1.0.39 sysvinit-utils_2.96-3 t1utils_1.41-4 tar_1.30+dfsg-7 tex-common_6.14 texlive-base_2020.20200417-1 texlive-binaries_2020.20200327.54578-4 texlive-fonts-recommended_2020.20200417-1 texlive-latex-base_2020.20200417-1 texlive-latex-extra_2020.20200417-1 texlive-latex-recommended_2020.20200417-1 texlive-pictures_2020.20200417-1 tzdata_2020a-1 ucf_3.0038+nmu1 util-linux_2.35.1-5 x11-common_1:7.7+20 xdg-utils_1.1.3-2 xml-core_0.18+nmu1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Tue May 12 11:11:24 2020 UTC
gpgv:                using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287
gpgv:                issuer "merkys@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./rdkit_201909.1-4.dsc
dpkg-source: info: extracting rdkit in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking rdkit_201909.1.orig.tar.xz
dpkg-source: info: unpacking rdkit_201909.1-4.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying NoDownloads.patch
dpkg-source: info: applying postgres_Makefile_fixes.patch
dpkg-source: info: applying postgres_disable_failing_tests.patch
dpkg-source: info: applying sphinx_imgconverter.patch
dpkg-source: info: applying catch2_header.patch
dpkg-source: info: applying postgres_alternative_test_outputs.patch

Check disk space
----------------

Sufficient free space for build

Hack binNMU version
-------------------

Created changelog entry for binNMU version 201909.1-4+b1

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=112
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-08f7c4ef-9365-47e1-a292-f4579f1bef48
SCHROOT_UID=107
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd

dpkg-buildpackage
-----------------

dpkg-buildpackage: info: source package rdkit
dpkg-buildpackage: info: source version 201909.1-4+b1
dpkg-buildpackage: info: source distribution bullseye-staging
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 fakeroot debian/rules clean
pg_buildext checkcontrol
supported-versions: WARNING! Unknown distribution: raspbian
debian found in ID_LIKE, treating as Debian
dh clean --with python3 --buildsystem=cmake --parallel
dh: warning: Compatibility levels before 10 are deprecated (level 9 in use)
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<PKGBUILDDIR>>'
find /<<PKGBUILDDIR>> -name "*.pyc" | xargs rm -f
rm -f -r Projects/DbCLI/testData/bzr/ rdkit/Chem/inchi.py
rm -f -r Docs/Book/_build Code/docs rdkit/docs Code/doxygen_sqlite3.db
rm -f \
Code/ForceField/MMFF/test_data/MMFF94_dative_min.sdf \
Code/ForceField/MMFF/test_data/MMFF94_dative_min_from_SMILES.sdf \
Code/ForceField/MMFF/test_data/MMFF94_hypervalent_min.sdf \
Code/ForceField/MMFF/test_data/MMFF94_hypervalent_min_from_SMILES.sdf \
Code/ForceField/MMFF/test_data/MMFF94_reference.log \
Code/ForceField/MMFF/test_data/MMFF94s_reference.log \
Code/ForceField/MMFF/test_data/testMMFFForceField.log \
Code/GraphMol/Depictor/test_data/cis_trans_cpp.out.sdf \
Code/GraphMol/Depictor/test_data/collisions.out.sdf \
Code/GraphMol/Depictor/test_data/first_200.out.sdf \
Code/GraphMol/Depictor/test_data/test1.out.sdf \
Code/GraphMol/FileParsers/test_data/blah.sdf \
Code/GraphMol/FileParsers/test_data/cdk2_stereo.sdf \
Code/GraphMol/FileParsers/test_data/outNCI_few.sdf \
Code/GraphMol/FileParsers/test_data/outNCI_few.tdt \
Code/GraphMol/FileParsers/test_data/outNCI_first_200.props.sdf \
Code/GraphMol/FileParsers/test_data/outSmiles.csv \
Code/GraphMol/ForceFieldHelpers/UFF/test_data/Issue62.sdf \
Code/GraphMol/MolAlign/test_data/ref_e2_pyCrippenO3A.sdf \
Code/GraphMol/SLNParse/lex.yysln.cpp \
Code/GraphMol/SLNParse/sln.tab.cpp \
Code/GraphMol/SLNParse/sln.tab.hpp \
Code/GraphMol/SmilesParse/lex.yysmarts.cpp \
Code/GraphMol/SmilesParse/lex.yysmiles.cpp \
Code/GraphMol/SmilesParse/smarts.tab.cpp \
Code/GraphMol/SmilesParse/smarts.tab.hpp \
Code/GraphMol/SmilesParse/smiles.tab.cpp \
Code/GraphMol/SmilesParse/smiles.tab.hpp \
Code/GraphMol/Wrap/test_data/outNCI_few.sdf \
Code/GraphMol/Wrap/test_data/outSmiles.txt \
Code/RDGeneral/versions.cpp \
Docs/Book/Cartridge.rst \
Docs/Book/Cookbook.rst \
Docs/Book/Install.rst \
Docs/Book/Overview.rst \
rdkit/ML/Data/test_data/testgeneral.dat.pkl \
rdkit/ML/Data/test_data/testquant.qdat.pkl
rm -f Code/RDGeneral/versions.h rdkit/sping/tests/testallps.ps
dh_auto_clean
dh_auto_clean: warning: Compatibility levels before 10 are deprecated (level 9 in use)
pg_buildext clean /<<PKGBUILDDIR>>/Code/PgSQL/rdkit build-%v
supported-versions: WARNING! Unknown distribution: raspbian
debian found in ID_LIKE, treating as Debian
### clean 12 ###
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_clean -O--buildsystem=cmake -O--parallel
dh_clean: warning: Compatibility levels before 10 are deprecated (level 9 in use)
 debian/rules build-arch
dh build-arch --with python3 --buildsystem=cmake --parallel
dh: warning: Compatibility levels before 10 are deprecated (level 9 in use)
   dh_update_autotools_config -a -O--buildsystem=cmake -O--parallel
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_configure -- -DCMAKE_BUILD_TYPE=None -DCMAKE_SKIP_RPATH=ON -DRDK_INSTALL_INTREE=OFF -DRDK_INSTALL_STATIC_LIBS=OFF -DRDK_BUILD_THREADSAFE_SSS=ON -DRDK_BUILD_PYTHON_WRAPPERS=ON -DRDK_OPTIMIZE_NATIVE=OFF -DRDK_USE_URF=OFF -DCMAKE_INSTALL_PREFIX=/usr -DPYTHON_EXECUTABLE=/usr/bin/python3.8 ../
dh_auto_configure: warning: Compatibility levels before 10 are deprecated (level 9 in use)
	cd obj-arm-linux-gnueabihf && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_AUTOGEN_VERBOSE=ON -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf -DCMAKE_BUILD_TYPE=None -DCMAKE_SKIP_RPATH=ON -DRDK_INSTALL_INTREE=OFF -DRDK_INSTALL_STATIC_LIBS=OFF -DRDK_BUILD_THREADSAFE_SSS=ON -DRDK_BUILD_PYTHON_WRAPPERS=ON -DRDK_OPTIMIZE_NATIVE=OFF -DRDK_USE_URF=OFF -DCMAKE_INSTALL_PREFIX=/usr -DPYTHON_EXECUTABLE=/usr/bin/python3.8 ../ ..
-- The C compiler identification is GNU 9.3.0
-- The CXX compiler identification is GNU 9.3.0
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Check if the system is big endian
-- Searching 16 bit integer
-- Looking for sys/types.h
-- Looking for sys/types.h - found
-- Looking for stdint.h
-- Looking for stdint.h - found
-- Looking for stddef.h
-- Looking for stddef.h - found
-- Check size of unsigned short
-- Check size of unsigned short - done
-- Using unsigned short
-- Check if the system is big endian - little endian
-- Found Catch2 source in /<<PKGBUILDDIR>>/External/catch/catch
CATCH: /<<PKGBUILDDIR>>/External/catch/catch/single_include
-- Found PythonInterp: /usr/bin/python3.8 (found version "3.8.3") 
-- Found PythonLibs: /usr/lib/arm-linux-gnueabihf/libpython3.8.so (found version "3.8.3") 
Python Install directory /usr/lib/python3/dist-packages
PYTHON Py_ENABLE_SHARED: 1
PYTHON USING LINK LINE: -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2
-- Could NOT find Eigen3 (missing: EIGEN3_INCLUDE_DIR EIGEN3_VERSION_OK) (Required is at least version "2.91.0")
Eigen3 not found, disabling the Descriptors3D build.
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE  
-- Found Boost: /usr/include (found suitable version "1.67.0", minimum required is "1.56.0") found components: serialization 
== Using strict rotor definition
-- Found Boost: /usr/include (found suitable version "1.67.0", minimum required is "1.56.0") found components: system iostreams regex 
-- maeparser include dir set as '/usr/include'
-- maeparser libraries set as '/usr/lib/arm-linux-gnueabihf/libmaeparser.so'
-- Found maeparser: /usr/include  
-- coordgen include dir set as /usr/include
-- coordgen libraries set as '/usr/lib/arm-linux-gnueabihf/libcoordgen.so'
-- coordgen templates file set as '/usr/share/coordgen/templates.mae'
-- Found coordgen: /usr/include  
== Updating Filters.cpp from pains file
== Done updating pains files
-- Configuring done
-- Generating done
CMake Warning:
  Manually-specified variables were not used by the project:

    CMAKE_AUTOGEN_VERBOSE
    CMAKE_EXPORT_NO_PACKAGE_REGISTRY
    CMAKE_INSTALL_LIBDIR
    CMAKE_INSTALL_LOCALSTATEDIR
    CMAKE_INSTALL_SYSCONFDIR


-- Build files have been written to: /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   debian/rules override_dh_auto_build
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_build
dh_auto_build: warning: Compatibility levels before 10 are deprecated (level 9 in use)
	cd obj-arm-linux-gnueabihf && make -j4
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cmake -S/<<PKGBUILDDIR>> -B/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles/progress.marks
make -f CMakeFiles/Makefile2 all
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f External/catch/CMakeFiles/catch.dir/build.make External/catch/CMakeFiles/catch.dir/depend
make -f External/INCHI-API/CMakeFiles/inchi_support.dir/build.make External/INCHI-API/CMakeFiles/inchi_support.dir/depend
make -f External/CoordGen/CMakeFiles/coordgen_support.dir/build.make External/CoordGen/CMakeFiles/coordgen_support.dir/depend
make -f External/RingFamilies/CMakeFiles/ringdecomposerlib_support.dir/build.make External/RingFamilies/CMakeFiles/ringdecomposerlib_support.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/External/catch /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/catch /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/catch/CMakeFiles/catch.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/External/CoordGen /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/CMakeFiles/coordgen_support.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/External/INCHI-API /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/INCHI-API /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/INCHI-API/CMakeFiles/inchi_support.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/External/RingFamilies /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/RingFamilies /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/RingFamilies/CMakeFiles/ringdecomposerlib_support.dir/DependInfo.cmake --color=
Scanning dependencies of target inchi_support
Scanning dependencies of target catch
Scanning dependencies of target ringdecomposerlib_support
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f External/INCHI-API/CMakeFiles/inchi_support.dir/build.make External/INCHI-API/CMakeFiles/inchi_support.dir/build
make -f External/catch/CMakeFiles/catch.dir/build.make External/catch/CMakeFiles/catch.dir/build
make -f External/RingFamilies/CMakeFiles/ringdecomposerlib_support.dir/build.make External/RingFamilies/CMakeFiles/ringdecomposerlib_support.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/INCHI-API && /usr/bin/cmake -E copy /<<PKGBUILDDIR>>/External/INCHI-API/python/noinchi.py /<<PKGBUILDDIR>>/rdkit/Chem/inchi.py
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'External/catch/CMakeFiles/catch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'External/RingFamilies/CMakeFiles/ringdecomposerlib_support.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Scanning dependencies of target coordgen_support
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f External/CoordGen/CMakeFiles/coordgen_support.dir/build.make External/CoordGen/CMakeFiles/coordgen_support.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'External/CoordGen/CMakeFiles/coordgen_support.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  0%] Built target ringdecomposerlib_support
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  0%] Built target catch
make -f Code/RDGeneral/CMakeFiles/RDGeneral.dir/build.make Code/RDGeneral/CMakeFiles/RDGeneral.dir/depend
make -f Code/RDStreams/CMakeFiles/RDStreams.dir/build.make Code/RDStreams/CMakeFiles/RDStreams.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDStreams /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDStreams /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDStreams/CMakeFiles/RDStreams.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/RDGeneral.dir/DependInfo.cmake --color=
[  0%] Built target coordgen_support
[  0%] Built target inchi_support
make -f Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/build.make Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ML/Cluster/Murtagh /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/DependInfo.cmake --color=
Scanning dependencies of target RDStreams
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/RDStreams/CMakeFiles/RDStreams.dir/build.make Code/RDStreams/CMakeFiles/RDStreams.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Scanning dependencies of target hc
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/build.make Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Scanning dependencies of target RDGeneral
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/RDGeneral/CMakeFiles/RDGeneral.dir/build.make Code/RDGeneral/CMakeFiles/RDGeneral.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  0%] Building CXX object Code/RDStreams/CMakeFiles/RDStreams.dir/streams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDStreams && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_RDSTREAMS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -DRDStreams_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/RDStreams.dir/streams.cpp.o -c /<<PKGBUILDDIR>>/Code/RDStreams/streams.cpp
[  1%] Building C object Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/hc.c.o
[  1%] Building C object Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/hcdriver.c.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh && /usr/bin/cc -DRDKIT_DYN_LINK -DRDKIT_HC_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Dhc_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -fPIC -fPIC   -o CMakeFiles/hc.dir/hc.c.o   -c /<<PKGBUILDDIR>>/Code/ML/Cluster/Murtagh/hc.c
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh && /usr/bin/cc -DRDKIT_DYN_LINK -DRDKIT_HC_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Dhc_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -fPIC -fPIC   -o CMakeFiles/hc.dir/hcdriver.c.o   -c /<<PKGBUILDDIR>>/Code/ML/Cluster/Murtagh/hcdriver.c
[  1%] Building CXX object Code/RDGeneral/CMakeFiles/RDGeneral.dir/Invariant.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/c++  -DRDGeneral_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGENERAL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/RDGeneral.dir/Invariant.cpp.o -c /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.cpp
[  1%] Building CXX object Code/RDGeneral/CMakeFiles/RDGeneral.dir/types.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/c++  -DRDGeneral_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGENERAL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/RDGeneral.dir/types.cpp.o -c /<<PKGBUILDDIR>>/Code/RDGeneral/types.cpp
[  1%] Linking C shared library ../../../../lib/libRDKithc.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh && /usr/bin/cmake -E cmake_link_script CMakeFiles/hc.dir/link.txt --verbose=1
/usr/bin/cc -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKithc.so.1 -o ../../../../lib/libRDKithc.so.1.2019.09.1 CMakeFiles/hc.dir/hc.c.o CMakeFiles/hc.dir/hcdriver.c.o 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libRDKithc.so.1.2019.09.1 ../../../../lib/libRDKithc.so.1 ../../../../lib/libRDKithc.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  1%] Built target hc
[  2%] Building CXX object Code/RDGeneral/CMakeFiles/RDGeneral.dir/utils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/c++  -DRDGeneral_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGENERAL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/RDGeneral.dir/utils.cpp.o -c /<<PKGBUILDDIR>>/Code/RDGeneral/utils.cpp
[  2%] Building CXX object Code/RDGeneral/CMakeFiles/RDGeneral.dir/RDLog.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/c++  -DRDGeneral_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGENERAL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/RDGeneral.dir/RDLog.cpp.o -c /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.cpp
[  2%] Building CXX object Code/RDGeneral/CMakeFiles/RDGeneral.dir/Dict.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/c++  -DRDGeneral_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGENERAL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/RDGeneral.dir/Dict.cpp.o -c /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.cpp
[  2%] Building CXX object Code/RDGeneral/CMakeFiles/RDGeneral.dir/LocaleSwitcher.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/c++  -DRDGeneral_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGENERAL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/RDGeneral.dir/LocaleSwitcher.cpp.o -c /<<PKGBUILDDIR>>/Code/RDGeneral/LocaleSwitcher.cpp
[  2%] Building CXX object Code/RDGeneral/CMakeFiles/RDGeneral.dir/versions.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/c++  -DRDGeneral_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGENERAL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/RDGeneral.dir/versions.cpp.o -c /<<PKGBUILDDIR>>/Code/RDGeneral/versions.cpp
[  3%] Linking CXX shared library ../../lib/libRDKitRDStreams.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDStreams && /usr/bin/cmake -E cmake_link_script CMakeFiles/RDStreams.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitRDStreams.so.1 -o ../../lib/libRDKitRDStreams.so.1.2019.09.1 CMakeFiles/RDStreams.dir/streams.cpp.o  -lboost_system -lboost_iostreams -lboost_regex -lboost_system -lboost_iostreams -lboost_regex 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDStreams && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitRDStreams.so.1.2019.09.1 ../../lib/libRDKitRDStreams.so.1 ../../lib/libRDKitRDStreams.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  3%] Built target RDStreams
[  3%] Linking CXX shared library ../../lib/libRDKitRDGeneral.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/cmake -E cmake_link_script CMakeFiles/RDGeneral.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitRDGeneral.so.1 -o ../../lib/libRDKitRDGeneral.so.1.2019.09.1 CMakeFiles/RDGeneral.dir/Invariant.cpp.o CMakeFiles/RDGeneral.dir/types.cpp.o CMakeFiles/RDGeneral.dir/utils.cpp.o CMakeFiles/RDGeneral.dir/RDLog.cpp.o CMakeFiles/RDGeneral.dir/Dict.cpp.o CMakeFiles/RDGeneral.dir/LocaleSwitcher.cpp.o CMakeFiles/RDGeneral.dir/versions.cpp.o  -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitRDGeneral.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1 ../../lib/libRDKitRDGeneral.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  3%] Built target RDGeneral
make -f Code/DataStructs/CMakeFiles/DataStructs.dir/build.make Code/DataStructs/CMakeFiles/DataStructs.dir/depend
make -f Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/build.make Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/depend
make -f Code/RDBoost/CMakeFiles/RDBoost.dir/build.make Code/RDBoost/CMakeFiles/RDBoost.dir/depend
make -f Code/RDGeneral/CMakeFiles/testRDValue.dir/build.make Code/RDGeneral/CMakeFiles/testRDValue.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/DataStructs.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/testRDValue.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDBoost /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost/CMakeFiles/RDBoost.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/EigenSolvers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/DependInfo.cmake --color=
Scanning dependencies of target RDBoost
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/RDBoost/CMakeFiles/RDBoost.dir/build.make Code/RDBoost/CMakeFiles/RDBoost.dir/build
Scanning dependencies of target EigenSolvers
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/build.make Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Scanning dependencies of target DataStructs
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/DataStructs/CMakeFiles/DataStructs.dir/build.make Code/DataStructs/CMakeFiles/DataStructs.dir/build
[  3%] Building CXX object Code/RDBoost/CMakeFiles/RDBoost.dir/Wrap.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost && /usr/bin/c++  -DRDBoost_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDBOOST_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/RDBoost.dir/Wrap.cpp.o -c /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.cpp
[  3%] Building CXX object Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/PowerEigenSolver.cpp.o
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers && /usr/bin/c++  -DEigenSolvers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_EIGENSOLVERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/EigenSolvers.dir/PowerEigenSolver.cpp.o -c /<<PKGBUILDDIR>>/Code/Numerics/EigenSolvers/PowerEigenSolver.cpp
Scanning dependencies of target testRDValue
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/RDGeneral/CMakeFiles/testRDValue.dir/build.make Code/RDGeneral/CMakeFiles/testRDValue.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  3%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/BitVect.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/DataStructs.dir/BitVect.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/BitVect.cpp
[  3%] Building CXX object Code/RDGeneral/CMakeFiles/testRDValue.dir/testRDValue.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_RDGENERAL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testRDValue.dir/testRDValue.cpp.o -c /<<PKGBUILDDIR>>/Code/RDGeneral/testRDValue.cpp
[  3%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/SparseBitVect.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/DataStructs.dir/SparseBitVect.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/SparseBitVect.cpp
[  3%] Linking CXX shared library ../../../lib/libRDKitEigenSolvers.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers && /usr/bin/cmake -E cmake_link_script CMakeFiles/EigenSolvers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitEigenSolvers.so.1 -o ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 CMakeFiles/EigenSolvers.dir/PowerEigenSolver.cpp.o  ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1 ../../../lib/libRDKitEigenSolvers.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  3%] Built target EigenSolvers
make -f Code/RDGeneral/CMakeFiles/testDict.dir/build.make Code/RDGeneral/CMakeFiles/testDict.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/testDict.dir/DependInfo.cmake --color=
Scanning dependencies of target testDict
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/RDGeneral/CMakeFiles/testDict.dir/build.make Code/RDGeneral/CMakeFiles/testDict.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  4%] Building CXX object Code/RDGeneral/CMakeFiles/testDict.dir/testDict.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_RDGENERAL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testDict.dir/testDict.cpp.o -c /<<PKGBUILDDIR>>/Code/RDGeneral/testDict.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue-taggedunion.h:40,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue.h:39,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/testRDValue.cpp:2:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long double&}; _Tp = long double; _Alloc = std::allocator<long double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<long double, std::allocator<long double> >::iterator' {aka '__gnu_cxx::__normal_iterator<long double*, std::vector<long double, std::allocator<long double> > >'} changed in GCC 7.1
[  4%] Linking CXX shared library ../../lib/libRDKitRDBoost.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost && /usr/bin/cmake -E cmake_link_script CMakeFiles/RDBoost.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitRDBoost.so.1 -o ../../lib/libRDKitRDBoost.so.1.2019.09.1 CMakeFiles/RDBoost.dir/Wrap.cpp.o  ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitRDBoost.so.1.2019.09.1 ../../lib/libRDKitRDBoost.so.1 ../../lib/libRDKitRDBoost.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  4%] Built target RDBoost
[  4%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/ExplicitBitVect.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/DataStructs.dir/ExplicitBitVect.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/ExplicitBitVect.cpp
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue-taggedunion.h:40,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue.h:39,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/testRDValue.cpp:2:
/usr/include/c++/9/bits/stl_vector.h: In function 'void testVector() [with T = double]':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[  5%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/Utils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/DataStructs.dir/Utils.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/Utils.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue-taggedunion.h:40,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue.h:39,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/testRDValue.cpp:2:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long double}; _Tp = long double; _Alloc = std::allocator<long double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<long double, std::allocator<long double> >::iterator' {aka '__gnu_cxx::__normal_iterator<long double*, std::vector<long double, std::allocator<long double> > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue-taggedunion.h:40,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue.h:39,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/testRDValue.cpp:2:
/usr/include/c++/9/bits/stl_vector.h: In function 'void testVector() [with T = long double]':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long double*, std::vector<long double, std::allocator<long double> > >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long double*, std::vector<long double, std::allocator<long double> > >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue-taggedunion.h:40,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue.h:39,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/testRDValue.cpp:2:
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long double*, std::vector<long double, std::allocator<long double> > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[  5%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/base64.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/DataStructs.dir/base64.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/base64.cpp
[  5%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/BitOps.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/DataStructs.dir/BitOps.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/BitOps.cpp
[  5%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/DiscreteDistMat.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/DataStructs.dir/DiscreteDistMat.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/DiscreteDistMat.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/testDict.cpp:14:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
[  5%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/DiscreteValueVect.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/DataStructs.dir/DiscreteValueVect.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/DiscreteValueVect.cpp
[  5%] Linking CXX executable testRDValue
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/cmake -E cmake_link_script CMakeFiles/testRDValue.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testRDValue.dir/testRDValue.cpp.o  -o testRDValue  ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
/usr/include/c++/9/bits/vector.tcc: In function 'void testVectToString()':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  5%] Built target testRDValue
make -f Code/Numerics/CMakeFiles/testMatrices.dir/build.make Code/Numerics/CMakeFiles/testMatrices.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/CMakeFiles/testMatrices.dir/DependInfo.cmake --color=
Scanning dependencies of target testMatrices
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Numerics/CMakeFiles/testMatrices.dir/build.make Code/Numerics/CMakeFiles/testMatrices.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  5%] Building CXX object Code/Numerics/CMakeFiles/testMatrices.dir/testMatrices.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testMatrices.dir/testMatrices.cpp.o -c /<<PKGBUILDDIR>>/Code/Numerics/testMatrices.cpp
In file included from /usr/include/c++/9/map:60,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/testDict.cpp:14:
/usr/include/c++/9/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/testDict.cpp:14:
/usr/include/c++/9/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](std::map<_Key, _Tp, _Compare, _Alloc>::key_type&&) [with _Key = std::__cxx11::basic_string<char>; _Tp = RDKit::RDAny; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> >]':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/testDict.cpp:14:
/usr/include/c++/9/bits/stl_vector.h: In function 'void testRDAny()':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[  5%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/FPBReader.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/DataStructs.dir/FPBReader.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/FPBReader.cpp
[  6%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/MultiFPBReader.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/DataStructs.dir/MultiFPBReader.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/MultiFPBReader.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/dynamic_bitset/dynamic_bitset.hpp:24,
                 from /usr/include/boost/dynamic_bitset.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/ExplicitBitVect.h:16,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/FPBReader.cpp:15:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<double, unsigned int>}; _Tp = std::pair<double, unsigned int>; _Alloc = std::allocator<std::pair<double, unsigned int> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::pair<double, unsigned int> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair<double, unsigned int>}; _Tp = std::pair<double, unsigned int>; _Alloc = std::allocator<std::pair<double, unsigned int> >]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[  6%] Linking CXX executable testDict
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDict.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testDict.dir/testDict.cpp.o  -o testDict  ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
[  6%] Linking CXX executable testMatrices
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMatrices.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMatrices.dir/testMatrices.cpp.o  -o testMatrices  ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  6%] Built target testDict
make -f Code/Catalogs/CMakeFiles/Catalogs.dir/build.make Code/Catalogs/CMakeFiles/Catalogs.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Catalogs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Catalogs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Catalogs/CMakeFiles/Catalogs.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  6%] Built target testMatrices
make -f Code/Query/CMakeFiles/testQuery.dir/build.make Code/Query/CMakeFiles/testQuery.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Query /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Query /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Query/CMakeFiles/testQuery.dir/DependInfo.cmake --color=
Scanning dependencies of target Catalogs
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Catalogs/CMakeFiles/Catalogs.dir/build.make Code/Catalogs/CMakeFiles/Catalogs.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  6%] Building CXX object Code/Catalogs/CMakeFiles/Catalogs.dir/Catalog.cpp.o
Scanning dependencies of target testQuery
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Catalogs && /usr/bin/c++  -DCatalogs_EXPORTS -DRDKIT_CATALOGS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Catalogs.dir/Catalog.cpp.o -c /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.cpp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Query/CMakeFiles/testQuery.dir/build.make Code/Query/CMakeFiles/testQuery.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  7%] Building CXX object Code/Query/CMakeFiles/testQuery.dir/test.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Query && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testQuery.dir/test.cpp.o -c /<<PKGBUILDDIR>>/Code/Query/test.cpp
In file included from /usr/include/c++/9/algorithm:62,
                 from /usr/include/boost/dynamic_bitset/dynamic_bitset.hpp:23,
                 from /usr/include/boost/dynamic_bitset.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/ExplicitBitVect.h:16,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/FPBReader.cpp:15:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairGreater<double, unsigned int> >]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairGreater<double, unsigned int> >]':
/usr/include/c++/9/bits/stl_algo.h:1879:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1879 |     __final_insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1879:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1879:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /usr/include/boost/dynamic_bitset/dynamic_bitset.hpp:23,
                 from /usr/include/boost/dynamic_bitset.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/ExplicitBitVect.h:16,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/FPBReader.cpp:15:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >; _Distance = int; _Tp = std::pair<double, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairGreater<double, unsigned int> >]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /usr/include/boost/core/swap.hpp:25,
                 from /usr/include/boost/utility/swap.hpp:15,
                 from /usr/include/boost/tuple/detail/tuple_basic.hpp:40,
                 from /usr/include/boost/tuple/tuple.hpp:28,
                 from /usr/include/boost/tuple/tuple_comparison.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/MultiFPBReader.cpp:11:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<RDKit::{anonymous}::tplSorter>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::{anonymous}::tplSorter>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
In file included from /usr/include/c++/9/algorithm:62,
                 from /usr/include/boost/dynamic_bitset/dynamic_bitset.hpp:23,
                 from /usr/include/boost/dynamic_bitset.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/ExplicitBitVect.h:16,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/FPBReader.cpp:15:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairGreater<double, unsigned int> >]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /usr/include/boost/core/swap.hpp:25,
                 from /usr/include/boost/utility/swap.hpp:15,
                 from /usr/include/boost/tuple/detail/tuple_basic.hpp:40,
                 from /usr/include/boost/tuple/tuple.hpp:28,
                 from /usr/include/boost/tuple/tuple_comparison.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/MultiFPBReader.cpp:11:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >; _Distance = int; _Tp = boost::tuples::tuple<double, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::{anonymous}::tplSorter>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'std::vector<std::pair<double, unsigned int> > RDKit::FPBReader::getTverskyNeighbors(const uint8_t*, double, double, double, bool) const':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1970:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1970 |    std::__final_insertion_sort(__first, __last, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /usr/include/boost/core/swap.hpp:25,
                 from /usr/include/boost/utility/swap.hpp:15,
                 from /usr/include/boost/tuple/detail/tuple_basic.hpp:40,
                 from /usr/include/boost/tuple/tuple.hpp:28,
                 from /usr/include/boost/tuple/tuple_comparison.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/MultiFPBReader.cpp:11:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::{anonymous}::tplSorter>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'std::vector<std::pair<double, unsigned int> > RDKit::FPBReader::getTanimotoNeighbors(const uint8_t*, double, bool) const':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1970:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1970 |    std::__final_insertion_sort(__first, __last, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Ranking.h:21,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/MultiFPBReader.cpp:14:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {boost::tuples::tuple<double, unsigned int, unsigned int, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>}; _Tp = boost::tuples::tuple<double, unsigned int, unsigned int>; _Alloc = std::allocator<boost::tuples::tuple<double, unsigned int, unsigned int> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> >::iterator' {aka '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {boost::tuples::tuple<double, unsigned int, unsigned int, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>}; _Tp = boost::tuples::tuple<double, unsigned int, unsigned int>; _Alloc = std::allocator<boost::tuples::tuple<double, unsigned int, unsigned int> >]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
make -f Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/build.make Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataManip/MetricMatrixCalc /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/DependInfo.cmake --color=
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >; _Tp = boost::tuples::tuple<double, unsigned int, unsigned int>; _Alloc = std::allocator<boost::tuples::tuple<double, unsigned int, unsigned int> >]':
/usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type 'std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> >::iterator' {aka '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >'} changed in GCC 7.1
  721 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
Scanning dependencies of target testMatCalc
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/build.make Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  8%] Building CXX object Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/testMatCalc.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testMatCalc.dir/testMatCalc.cpp.o -c /<<PKGBUILDDIR>>/Code/DataManip/MetricMatrixCalc/testMatCalc.cpp
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Ranking.h:21,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/MultiFPBReader.cpp:14:
/usr/include/c++/9/bits/stl_vector.h: In function 'void RDKit::{anonymous}::generic_nbr_helper(std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> >&, T, const RDKit::{anonymous}::sim_args&, unsigned int) [with T = void (*)(unsigned int, unsigned int, const RDKit::{anonymous}::sim_args*)]':
/usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type 'std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> >::iterator' {aka '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >'} changed in GCC 7.1
 1662 |    _M_range_insert(__pos, __first, __last,
      |    ^~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
In file included from /usr/include/c++/9/algorithm:62,
                 from /usr/include/boost/core/swap.hpp:25,
                 from /usr/include/boost/utility/swap.hpp:15,
                 from /usr/include/boost/tuple/detail/tuple_basic.hpp:40,
                 from /usr/include/boost/tuple/tuple.hpp:28,
                 from /usr/include/boost/tuple/tuple_comparison.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/MultiFPBReader.cpp:11:
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[  8%] Linking CXX shared library ../../lib/libRDKitDataStructs.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/cmake -E cmake_link_script CMakeFiles/DataStructs.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitDataStructs.so.1 -o ../../lib/libRDKitDataStructs.so.1.2019.09.1 CMakeFiles/DataStructs.dir/BitVect.cpp.o CMakeFiles/DataStructs.dir/SparseBitVect.cpp.o CMakeFiles/DataStructs.dir/ExplicitBitVect.cpp.o CMakeFiles/DataStructs.dir/Utils.cpp.o CMakeFiles/DataStructs.dir/base64.cpp.o CMakeFiles/DataStructs.dir/BitOps.cpp.o CMakeFiles/DataStructs.dir/DiscreteDistMat.cpp.o CMakeFiles/DataStructs.dir/DiscreteValueVect.cpp.o CMakeFiles/DataStructs.dir/FPBReader.cpp.o CMakeFiles/DataStructs.dir/MultiFPBReader.cpp.o  ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
[  8%] Building CXX object Code/Catalogs/CMakeFiles/Catalogs.dir/CatalogParams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Catalogs && /usr/bin/c++  -DCatalogs_EXPORTS -DRDKIT_CATALOGS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Catalogs.dir/CatalogParams.cpp.o -c /<<PKGBUILDDIR>>/Code/Catalogs/CatalogParams.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1 ../../lib/libRDKitDataStructs.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  8%] Built target DataStructs
make -f Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/DependInfo.cmake --color=
Scanning dependencies of target SimDivPickers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  9%] Building CXX object Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/DistPicker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SIMDIVPICKERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSimDivPickers_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SimDivPickers.dir/DistPicker.cpp.o -c /<<PKGBUILDDIR>>/Code/SimDivPickers/DistPicker.cpp
[  9%] Linking CXX executable testMatCalc
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMatCalc.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMatCalc.dir/testMatCalc.cpp.o  -o testMatCalc  ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
[  9%] Building CXX object Code/Catalogs/CMakeFiles/Catalogs.dir/CatalogEntry.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Catalogs && /usr/bin/c++  -DCatalogs_EXPORTS -DRDKIT_CATALOGS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Catalogs.dir/CatalogEntry.cpp.o -c /<<PKGBUILDDIR>>/Code/Catalogs/CatalogEntry.cpp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  9%] Built target testMatCalc
[  9%] Building CXX object Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/MaxMinPicker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SIMDIVPICKERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSimDivPickers_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SimDivPickers.dir/MaxMinPicker.cpp.o -c /<<PKGBUILDDIR>>/Code/SimDivPickers/MaxMinPicker.cpp
[  9%] Linking CXX shared library ../../lib/libRDKitCatalogs.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Catalogs && /usr/bin/cmake -E cmake_link_script CMakeFiles/Catalogs.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitCatalogs.so.1 -o ../../lib/libRDKitCatalogs.so.1.2019.09.1 CMakeFiles/Catalogs.dir/Catalog.cpp.o CMakeFiles/Catalogs.dir/CatalogParams.cpp.o CMakeFiles/Catalogs.dir/CatalogEntry.cpp.o  ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Catalogs && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../lib/libRDKitCatalogs.so.1 ../../lib/libRDKitCatalogs.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  9%] Built target Catalogs
[  9%] Building CXX object Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/HierarchicalClusterPicker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SIMDIVPICKERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSimDivPickers_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SimDivPickers.dir/HierarchicalClusterPicker.cpp.o -c /<<PKGBUILDDIR>>/Code/SimDivPickers/HierarchicalClusterPicker.cpp
make -f Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/build.make Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ML/Cluster/Murtagh /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/DependInfo.cmake --color=
Scanning dependencies of target Clustering
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/build.make Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  9%] Building CXX object Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/Clustering.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh && /usr/bin/c++  -DClustering_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_HC_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Clustering.dir/Clustering.cpp.o -c /<<PKGBUILDDIR>>/Code/ML/Cluster/Murtagh/Clustering.cpp
make -f Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build.make Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ML/InfoTheory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/DependInfo.cmake --color=
Scanning dependencies of target InfoTheory
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build.make Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  9%] Building CXX object Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/InfoBitRanker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory && /usr/bin/c++  -DInfoTheory_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_INFOTHEORY_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/InfoTheory.dir/InfoBitRanker.cpp.o -c /<<PKGBUILDDIR>>/Code/ML/InfoTheory/InfoBitRanker.cpp
[  9%] Linking CXX executable testQuery
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Query && /usr/bin/cmake -E cmake_link_script CMakeFiles/testQuery.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testQuery.dir/test.cpp.o  -o testQuery  ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  9%] Built target testQuery
make -f Code/Geometry/CMakeFiles/RDGeometryLib.dir/build.make Code/Geometry/CMakeFiles/RDGeometryLib.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/RDGeometryLib.dir/DependInfo.cmake --color=
Scanning dependencies of target RDGeometryLib
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Geometry/CMakeFiles/RDGeometryLib.dir/build.make Code/Geometry/CMakeFiles/RDGeometryLib.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  9%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/point.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++  -DRDGeometryLib_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/RDGeometryLib.dir/point.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/point.cpp
[  9%] Linking CXX shared library ../../lib/libRDKitSimDivPickers.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/cmake -E cmake_link_script CMakeFiles/SimDivPickers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitSimDivPickers.so.1 -o ../../lib/libRDKitSimDivPickers.so.1.2019.09.1 CMakeFiles/SimDivPickers.dir/DistPicker.cpp.o CMakeFiles/SimDivPickers.dir/MaxMinPicker.cpp.o CMakeFiles/SimDivPickers.dir/HierarchicalClusterPicker.cpp.o  ../../lib/libRDKithc.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitSimDivPickers.so.1.2019.09.1 ../../lib/libRDKitSimDivPickers.so.1 ../../lib/libRDKitSimDivPickers.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  9%] Built target SimDivPickers
[ 10%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/Transform2D.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++  -DRDGeometryLib_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/RDGeometryLib.dir/Transform2D.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/Transform2D.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/ML/InfoTheory/InfoBitRanker.h:15,
                 from /<<PKGBUILDDIR>>/Code/ML/InfoTheory/InfoBitRanker.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair<double, int>&}; _Tp = std::pair<double, int>; _Alloc = std::allocator<std::pair<double, int> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::pair<double, int> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<double, int>*, std::vector<std::pair<double, int> > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::pair<double, int> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<double, int>*, std::vector<std::pair<double, int> > >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/ML/InfoTheory/InfoBitRanker.h:15,
                 from /<<PKGBUILDDIR>>/Code/ML/InfoTheory/InfoBitRanker.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In member function 'double* RDInfoTheory::InfoBitRanker::getTopN(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, int>*, std::vector<std::pair<double, int> > >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, int>*, std::vector<std::pair<double, int> > >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 10%] Linking CXX shared library ../../../lib/libRDKitInfoTheory.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory && /usr/bin/cmake -E cmake_link_script CMakeFiles/InfoTheory.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitInfoTheory.so.1 -o ../../../lib/libRDKitInfoTheory.so.1.2019.09.1 CMakeFiles/InfoTheory.dir/InfoBitRanker.cpp.o  ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitInfoTheory.so.1.2019.09.1 ../../../lib/libRDKitInfoTheory.so.1 ../../../lib/libRDKitInfoTheory.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 10%] Built target InfoTheory
make -f Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/build.make Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDBoost/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/DependInfo.cmake --color=
Scanning dependencies of target rdBase
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/build.make Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 10%] Building CXX object Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/RDBase.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdBase_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdBase.dir/RDBase.cpp.o -c /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp
[ 10%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/Transform3D.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++  -DRDGeometryLib_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/RDGeometryLib.dir/Transform3D.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/Transform3D.cpp
[ 10%] Linking CXX shared module ../../../../rdkit/ML/Cluster/Clustering.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh && /usr/bin/cmake -E cmake_link_script CMakeFiles/Clustering.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/ML/Cluster/Clustering.so CMakeFiles/Clustering.dir/Clustering.cpp.o  ../../../../lib/libRDKithc.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 10%] Built target Clustering
make -f Code/DataStructs/CMakeFiles/testFPB.dir/build.make Code/DataStructs/CMakeFiles/testFPB.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/testFPB.dir/DependInfo.cmake --color=
Scanning dependencies of target testFPB
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/DataStructs/CMakeFiles/testFPB.dir/build.make Code/DataStructs/CMakeFiles/testFPB.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 10%] Building CXX object Code/DataStructs/CMakeFiles/testFPB.dir/testFPB.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testFPB.dir/testFPB.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/testFPB.cpp
[ 10%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/UniformGrid3D.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++  -DRDGeometryLib_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/RDGeometryLib.dir/UniformGrid3D.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/UniformGrid3D.cpp
/<<PKGBUILDDIR>>/Code/Geometry/UniformGrid3D.cpp: In member function 'RDGeom::UniformGrid3D& RDGeom::UniformGrid3D::operator=(const RDGeom::UniformGrid3D&)':
/<<PKGBUILDDIR>>/Code/Geometry/UniformGrid3D.cpp:39:11: warning: control reaches end of non-void function [-Wreturn-type]
   39 |   initGrid(other.d_numX * other.d_spacing, other.d_numY * other.d_spacing,
      |   ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   40 |            other.d_numZ * other.d_spacing, other.d_spacing,
      |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   41 |            other.dp_storage->getValueType(), other.d_offSet, data);
      |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 10%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/GridUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++  -DRDGeometryLib_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/RDGeometryLib.dir/GridUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/GridUtils.cpp
make -f Code/DataStructs/CMakeFiles/testDataStructs.dir/build.make Code/DataStructs/CMakeFiles/testDataStructs.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/testDataStructs.dir/DependInfo.cmake --color=
Scanning dependencies of target testDataStructs
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/DataStructs/CMakeFiles/testDataStructs.dir/build.make Code/DataStructs/CMakeFiles/testDataStructs.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 10%] Building CXX object Code/DataStructs/CMakeFiles/testDataStructs.dir/testDatastructs.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testDataStructs.dir/testDatastructs.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Geometry/GridUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/Geometry/GridUtils.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDGeom::Point3D&}; _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Geometry/GridUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/Geometry/GridUtils.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In function 'std::vector<RDGeom::Point3D> RDGeom::findGridTerminalPoints(const RDGeom::UniformGrid3D&, double, double)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 10%] Linking CXX shared library ../../lib/libRDKitRDGeometryLib.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/cmake -E cmake_link_script CMakeFiles/RDGeometryLib.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitRDGeometryLib.so.1 -o ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 CMakeFiles/RDGeometryLib.dir/point.cpp.o CMakeFiles/RDGeometryLib.dir/Transform2D.cpp.o CMakeFiles/RDGeometryLib.dir/Transform3D.cpp.o CMakeFiles/RDGeometryLib.dir/UniformGrid3D.cpp.o CMakeFiles/RDGeometryLib.dir/GridUtils.cpp.o  ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
/<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp: In function 'void test5DiscreteVectOps2()':
/<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:477:19: warning: implicitly-declared 'RDKit::DiscreteValueVect& RDKit::DiscreteValueVect::operator=(const RDKit::DiscreteValueVect&)' is deprecated [-Wdeprecated-copy]
  477 |   vect5 = vect1 - vect2;
      |                   ^~~~~
In file included from /<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:22:
/<<PKGBUILDDIR>>/Code/DataStructs/DiscreteValueVect.h:50:3: note: because 'RDKit::DiscreteValueVect' has user-provided 'RDKit::DiscreteValueVect::DiscreteValueVect(const RDKit::DiscreteValueVect&)'
   50 |   DiscreteValueVect(const DiscreteValueVect &other);
      |   ^~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:479:19: warning: implicitly-declared 'RDKit::DiscreteValueVect& RDKit::DiscreteValueVect::operator=(const RDKit::DiscreteValueVect&)' is deprecated [-Wdeprecated-copy]
  479 |   vect5 = vect2 - vect1;
      |                   ^~~~~
In file included from /<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:22:
/<<PKGBUILDDIR>>/Code/DataStructs/DiscreteValueVect.h:50:3: note: because 'RDKit::DiscreteValueVect' has user-provided 'RDKit::DiscreteValueVect::DiscreteValueVect(const RDKit::DiscreteValueVect&)'
   50 |   DiscreteValueVect(const DiscreteValueVect &other);
      |   ^~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp: In function 'void test6SparseIntVect()':
/<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:627:17: warning: implicitly-declared 'RDKit::SparseIntVect<int>& RDKit::SparseIntVect<int>::operator=(const RDKit::SparseIntVect<int>&)' is deprecated [-Wdeprecated-copy]
  627 |     iV3 = iV1 & iV2;
      |                 ^~~
In file included from /<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:26:
/<<PKGBUILDDIR>>/Code/DataStructs/SparseIntVect.h:38:3: note: because 'RDKit::SparseIntVect<int>' has user-provided 'RDKit::SparseIntVect<IndexType>::SparseIntVect(const RDKit::SparseIntVect<IndexType>&) [with IndexType = int]'
   38 |   SparseIntVect(const SparseIntVect<IndexType> &other) {
      |   ^~~~~~~~~~~~~
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1 ../../lib/libRDKitRDGeometryLib.so
/<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:725:17: warning: implicitly-declared 'RDKit::SparseIntVect<int>& RDKit::SparseIntVect<int>::operator=(const RDKit::SparseIntVect<int>&)' is deprecated [-Wdeprecated-copy]
  725 |     iV3 = iV1 | iV2;
      |                 ^~~
In file included from /<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:26:
/<<PKGBUILDDIR>>/Code/DataStructs/SparseIntVect.h:38:3: note: because 'RDKit::SparseIntVect<int>' has user-provided 'RDKit::SparseIntVect<IndexType>::SparseIntVect(const RDKit::SparseIntVect<IndexType>&) [with IndexType = int]'
   38 |   SparseIntVect(const SparseIntVect<IndexType> &other) {
      |   ^~~~~~~~~~~~~
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:808:17: warning: implicitly-declared 'RDKit::SparseIntVect<int>& RDKit::SparseIntVect<int>::operator=(const RDKit::SparseIntVect<int>&)' is deprecated [-Wdeprecated-copy]
  808 |     iV3 = iV1 + iV2;
      |                 ^~~
In file included from /<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:26:
/<<PKGBUILDDIR>>/Code/DataStructs/SparseIntVect.h:38:3: note: because 'RDKit::SparseIntVect<int>' has user-provided 'RDKit::SparseIntVect<IndexType>::SparseIntVect(const RDKit::SparseIntVect<IndexType>&) [with IndexType = int]'
   38 |   SparseIntVect(const SparseIntVect<IndexType> &other) {
      |   ^~~~~~~~~~~~~
[ 10%] Built target RDGeometryLib
make -f Code/DataStructs/CMakeFiles/testMultiFPB.dir/build.make Code/DataStructs/CMakeFiles/testMultiFPB.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/testMultiFPB.dir/DependInfo.cmake --color=
/<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:864:17: warning: implicitly-declared 'RDKit::SparseIntVect<int>& RDKit::SparseIntVect<int>::operator=(const RDKit::SparseIntVect<int>&)' is deprecated [-Wdeprecated-copy]
  864 |     iV3 = iV1 - iV2;
      |                 ^~~
In file included from /<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:26:
/<<PKGBUILDDIR>>/Code/DataStructs/SparseIntVect.h:38:3: note: because 'RDKit::SparseIntVect<int>' has user-provided 'RDKit::SparseIntVect<IndexType>::SparseIntVect(const RDKit::SparseIntVect<IndexType>&) [with IndexType = int]'
   38 |   SparseIntVect(const SparseIntVect<IndexType> &other) {
      |   ^~~~~~~~~~~~~
Scanning dependencies of target testMultiFPB
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/DataStructs/CMakeFiles/testMultiFPB.dir/build.make Code/DataStructs/CMakeFiles/testMultiFPB.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 10%] Building CXX object Code/DataStructs/CMakeFiles/testMultiFPB.dir/testMultiFPB.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testMultiFPB.dir/testMultiFPB.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/testMultiFPB.cpp
[ 11%] Linking CXX executable testFPB
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFPB.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testFPB.dir/testFPB.cpp.o  -o testFPB  ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 11%] Built target testFPB
make -f Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/build.make Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataStructs/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/DependInfo.cmake --color=
Scanning dependencies of target cDataStructs
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/build.make Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 11%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/DataStructs.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/cDataStructs.dir/DataStructs.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/DataStructs.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/BitVect.h:14,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/BitVects.h:19,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:17:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In function 'void test16BitVectProps()':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 11%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/DiscreteValueVect.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/cDataStructs.dir/DiscreteValueVect.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/DiscreteValueVect.cpp
In file included from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:14:
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:379:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  379 |       result = off_type(bp::extract<off_type>(py_tell()));
      |                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:186:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |       off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                        ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:156:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |         off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                          ^
[ 11%] Linking CXX executable testMultiFPB
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMultiFPB.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMultiFPB.dir/testMultiFPB.cpp.o  -o testMultiFPB  ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 11%] Built target testMultiFPB
make -f Code/Geometry/CMakeFiles/geometryTestsCatch.dir/build.make Code/Geometry/CMakeFiles/geometryTestsCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/geometryTestsCatch.dir/DependInfo.cmake --color=
Scanning dependencies of target geometryTestsCatch
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Geometry/CMakeFiles/geometryTestsCatch.dir/build.make Code/Geometry/CMakeFiles/geometryTestsCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 11%] Building CXX object Code/Geometry/CMakeFiles/geometryTestsCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/geometryTestsCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/catch_tests.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/9/bits/stl_vector.h: In function 'void boost::python::container_utils::extend_container(Container&, boost::python::api::object) [with Container = std::vector<double>]':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In static member function 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_append(Container&, boost::python::api::object) [with Container = std::vector<double>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>]':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:184:5: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  184 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:184:5: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc:184:5: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/9/bits/stl_vector.h: In static member function 'static void boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_delete_item(Container&, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>; bool NoProxy = false; bool NoSlice = false; Data = double; Index = unsigned int; Key = double]':
/usr/include/c++/9/bits/stl_vector.h:1458:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1458 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |                                                                       ^
In file included from /usr/include/c++/9/algorithm:62,
                 from /usr/include/boost/function/detail/prologue.hpp:13,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/9/bits/stl_algo.h: In function '_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const double>]':
/usr/include/c++/9/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  112 |     __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last,
      |     ^~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h: In static member function 'static bool boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_contains(Container&, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>; bool NoProxy = false; bool NoSlice = false; Data = double; Index = unsigned int; Key = double]':
/usr/include/c++/9/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  161 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
  162 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  161 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
  162 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  721 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/9/bits/stl_vector.h: In static member function 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_extend(Container&, boost::python::api::object) [with Container = std::vector<double>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>]':
/usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
 1662 |    _M_range_insert(__pos, __first, __last,
      |    ^~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_vector.h: In static member function 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<double>, boost::python::detail::final_vector_derived_policies<std::vector<double>, false>, boost::python::detail::container_element<std::vector<double>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<double>, false> >, unsigned int>; Data = double; Index = unsigned int]':
/usr/include/c++/9/bits/stl_vector.h:1458:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1458 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |                                                                       ^
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/9/bits/vector.tcc:161:2: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  161 |  _M_realloc_insert(begin() + (__position - cbegin()), __x);
      |  ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/9/bits/stl_vector.h:1458:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1458 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |                                                                       ^
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/9/bits/vector.tcc:161:2: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  161 |  _M_realloc_insert(begin() + (__position - cbegin()), __x);
      |  ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
 1662 |    _M_range_insert(__pos, __first, __last,
      |    ^~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_vector.h:1458:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1458 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |                                                                       ^
/usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
 1662 |    _M_range_insert(__pos, __first, __last,
      |    ^~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
[ 11%] Linking CXX executable testDataStructs
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDataStructs.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testDataStructs.dir/testDatastructs.cpp.o  -o testDataStructs  ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 11%] Built target testDataStructs
[ 11%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/SparseIntVect.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/cDataStructs.dir/SparseIntVect.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/SparseIntVect.cpp
[ 11%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_SparseBV.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/cDataStructs.dir/wrap_SparseBV.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/wrap_SparseBV.cpp
[ 12%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_ExplicitBV.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/cDataStructs.dir/wrap_ExplicitBV.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/wrap_ExplicitBV.cpp
[ 12%] Linking CXX shared module ../../../rdkit/rdBase.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdBase.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/rdBase.so CMakeFiles/rdBase.dir/RDBase.cpp.o  ../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 12%] Built target rdBase
make -f Code/Geometry/CMakeFiles/testGrid.dir/build.make Code/Geometry/CMakeFiles/testGrid.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/testGrid.dir/DependInfo.cmake --color=
Scanning dependencies of target testGrid
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Geometry/CMakeFiles/testGrid.dir/build.make Code/Geometry/CMakeFiles/testGrid.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 12%] Building CXX object Code/Geometry/CMakeFiles/testGrid.dir/testGrid.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testGrid.dir/testGrid.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/testGrid.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/Geometry/catch_tests.cpp:3:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/Geometry/catch_tests.cpp:3:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/SparseIntVect.cpp:18:
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h: In function 'void {anonymous}::pyUpdateFromSequence(RDKit::SparseIntVect<IndexType>&, boost::python::api::object&) [with IndexType = long long int]':
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
   68 |       T res = python::extract<T>(d_seq[which]);
      |         ^~~
[ 12%] Linking CXX executable testGrid
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/cmake -E cmake_link_script CMakeFiles/testGrid.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testGrid.dir/testGrid.cpp.o  -o testGrid  ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 12%] Built target testGrid
make -f Code/Geometry/CMakeFiles/testTransforms.dir/build.make Code/Geometry/CMakeFiles/testTransforms.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/testTransforms.dir/DependInfo.cmake --color=
Scanning dependencies of target testTransforms
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Geometry/CMakeFiles/testTransforms.dir/build.make Code/Geometry/CMakeFiles/testTransforms.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 12%] Building CXX object Code/Geometry/CMakeFiles/testTransforms.dir/testTransforms.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testTransforms.dir/testTransforms.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/testTransforms.cpp
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h: In function 'void {anonymous}::pyUpdateFromSequence(RDKit::SparseIntVect<IndexType>&, boost::python::api::object&) [with IndexType = long long unsigned int]':
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
   68 |       T res = python::extract<T>(d_seq[which]);
      |         ^~~
[ 12%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_BitOps.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/cDataStructs.dir/wrap_BitOps.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/wrap_BitOps.cpp
[ 13%] Linking CXX executable testTransforms
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/cmake -E cmake_link_script CMakeFiles/testTransforms.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testTransforms.dir/testTransforms.cpp.o  -o testTransforms  ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 13%] Built target testTransforms
make -f Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build.make Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Geometry/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/DependInfo.cmake --color=
Scanning dependencies of target rdGeometry
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build.make Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 13%] Building CXX object Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/Point.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdGeometry_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdGeometry.dir/Point.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/Wrap/Point.cpp
[ 13%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_FPB.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/cDataStructs.dir/wrap_FPB.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/wrap_FPB.cpp
[ 13%] Building CXX object Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/UniformGrid3D.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdGeometry_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdGeometry.dir/UniformGrid3D.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/Wrap/UniformGrid3D.cpp
[ 13%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_Utils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/cDataStructs.dir/wrap_Utils.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/wrap_Utils.cpp
[ 14%] Linking CXX executable geometryTestsCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/cmake -E cmake_link_script CMakeFiles/geometryTestsCatch.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/geometryTestsCatch.dir/catch_tests.cpp.o  -o geometryTestsCatch  ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 14%] Built target geometryTestsCatch
[ 15%] Building CXX object Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/rdGeometry.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdGeometry_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdGeometry.dir/rdGeometry.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/Wrap/rdGeometry.cpp
make -f Code/Numerics/CMakeFiles/testConrec.dir/build.make Code/Numerics/CMakeFiles/testConrec.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/CMakeFiles/testConrec.dir/DependInfo.cmake --color=
Scanning dependencies of target testConrec
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Numerics/CMakeFiles/testConrec.dir/build.make Code/Numerics/CMakeFiles/testConrec.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 15%] Building CXX object Code/Numerics/CMakeFiles/testConrec.dir/testConrec.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testConrec.dir/testConrec.cpp.o -c /<<PKGBUILDDIR>>/Code/Numerics/testConrec.cpp
[ 15%] Linking CXX shared module ../../../rdkit/DataStructs/cDataStructs.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/cDataStructs.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/DataStructs/cDataStructs.so CMakeFiles/cDataStructs.dir/DataStructs.cpp.o CMakeFiles/cDataStructs.dir/DiscreteValueVect.cpp.o CMakeFiles/cDataStructs.dir/SparseIntVect.cpp.o CMakeFiles/cDataStructs.dir/wrap_SparseBV.cpp.o CMakeFiles/cDataStructs.dir/wrap_ExplicitBV.cpp.o CMakeFiles/cDataStructs.dir/wrap_BitOps.cpp.o CMakeFiles/cDataStructs.dir/wrap_FPB.cpp.o CMakeFiles/cDataStructs.dir/wrap_Utils.cpp.o  ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 15%] Built target cDataStructs
make -f Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/build.make Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataManip/MetricMatrixCalc/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMetricMatrixCalc
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/build.make Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 15%] Building CXX object Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/rdMetricMatrixCalc.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMetricMatrixCalc_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMetricMatrixCalc.dir/rdMetricMatrixCalc.cpp.o -c /<<PKGBUILDDIR>>/Code/DataManip/MetricMatrixCalc/Wrap/rdMetricMatrixCalc.cpp
make -f Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/build.make Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/DependInfo.cmake --color=
Scanning dependencies of target pickersTestsCatch
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/build.make Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 15%] Building CXX object Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SIMDIVPICKERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/pickersTestsCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/SimDivPickers/catch_tests.cpp
[ 15%] Linking CXX shared module ../../../rdkit/Geometry/rdGeometry.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdGeometry.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/Geometry/rdGeometry.so CMakeFiles/rdGeometry.dir/Point.cpp.o CMakeFiles/rdGeometry.dir/UniformGrid3D.cpp.o CMakeFiles/rdGeometry.dir/rdGeometry.cpp.o  ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 15%] Built target rdGeometry
make -f Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/DependInfo.cmake --color=
Scanning dependencies of target testSimDivPickers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 16%] Building CXX object Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/testPickers.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SIMDIVPICKERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testSimDivPickers.dir/testPickers.cpp.o -c /<<PKGBUILDDIR>>/Code/SimDivPickers/testPickers.cpp
In file included from /<<PKGBUILDDIR>>/Code/DataManip/MetricMatrixCalc/Wrap/rdMetricMatrixCalc.cpp:15:
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h: In function 'double RDDataManip::EuclideanDistanceMetric(const T1&, const T2&, unsigned int) [with T1 = PySequenceHolder<double>; T2 = PySequenceHolder<double>]':
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
   68 |       T res = python::extract<T>(d_seq[which]);
      |         ^~~
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
   68 |       T res = python::extract<T>(d_seq[which]);
      |         ^~~
[ 16%] Linking CXX shared module ../../../../rdkit/DataManip/Metric/rdMetricMatrixCalc.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMetricMatrixCalc.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/DataManip/Metric/rdMetricMatrixCalc.so CMakeFiles/rdMetricMatrixCalc.dir/rdMetricMatrixCalc.cpp.o  ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 16%] Built target rdMetricMatrixCalc
make -f Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build.make Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/DependInfo.cmake --color=
Scanning dependencies of target rdSimDivPickers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build.make Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 16%] Linking CXX executable testSimDivPickers
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSimDivPickers.dir/link.txt --verbose=1
[ 17%] Building CXX object Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/MaxMinPicker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSimDivPickers_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdSimDivPickers.dir/MaxMinPicker.cpp.o -c /<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/MaxMinPicker.cpp
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testSimDivPickers.dir/testPickers.cpp.o  -o testSimDivPickers  ../../lib/libRDKitSimDivPickers.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread ../../lib/libRDKithc.so.1.2019.09.1 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 17%] Built target testSimDivPickers
make -f Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build.make Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ML/InfoTheory/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/DependInfo.cmake --color=
Scanning dependencies of target rdInfoTheory
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build.make Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 17%] Building CXX object Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/InfoBitRanker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdInfoTheory_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdInfoTheory.dir/InfoBitRanker.cpp.o -c /<<PKGBUILDDIR>>/Code/ML/InfoTheory/Wrap/InfoBitRanker.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/Numerics/testConrec.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/Numerics/testConrec.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/MaxMinPicker.cpp:19:
/<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/PickerHelpers.h: In member function 'RDKit::INT_VECT RDPickers::MaxMinPicker::lazyPick(T&, unsigned int, unsigned int, const INT_VECT&, int, double&) const [with T = pyobjFunctor]':
/<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/PickerHelpers.h:53:48: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
   53 |     return python::extract<double>(dp_obj(i, j));
      |                                                ^
/<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/PickerHelpers.h:53:48: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
   53 |     return python::extract<double>(dp_obj(i, j));
      |                                                ^
[ 17%] Building CXX object Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/BitCorrMatGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdInfoTheory_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdInfoTheory.dir/BitCorrMatGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/ML/InfoTheory/Wrap/BitCorrMatGenerator.cpp
[ 17%] Building CXX object Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/LeaderPicker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSimDivPickers_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdSimDivPickers.dir/LeaderPicker.cpp.o -c /<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/LeaderPicker.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/SimDivPickers/catch_tests.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/SimDivPickers/catch_tests.cpp:13:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 17%] Building CXX object Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/rdInfoTheory.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdInfoTheory_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdInfoTheory.dir/rdInfoTheory.cpp.o -c /<<PKGBUILDDIR>>/Code/ML/InfoTheory/Wrap/rdInfoTheory.cpp
In file included from /<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/LeaderPicker.cpp:19:
/<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/PickerHelpers.h: In member function 'RDKit::INT_VECT RDPickers::LeaderPicker::lazyPick(T&, unsigned int, unsigned int, const INT_VECT&, double, int) const [with T = pyobjFunctor]':
/<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/PickerHelpers.h:53:48: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
   53 |     return python::extract<double>(dp_obj(i, j));
      |                                                ^
/<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/PickerHelpers.h:53:48: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
   53 |     return python::extract<double>(dp_obj(i, j));
      |                                                ^
[ 17%] Building CXX object Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/HierarchicalClusterPicker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSimDivPickers_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdSimDivPickers.dir/HierarchicalClusterPicker.cpp.o -c /<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/HierarchicalClusterPicker.cpp
[ 17%] Linking CXX shared module ../../../../rdkit/ML/InfoTheory/rdInfoTheory.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdInfoTheory.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/ML/InfoTheory/rdInfoTheory.so CMakeFiles/rdInfoTheory.dir/InfoBitRanker.cpp.o CMakeFiles/rdInfoTheory.dir/BitCorrMatGenerator.cpp.o CMakeFiles/rdInfoTheory.dir/rdInfoTheory.cpp.o  ../../../../lib/libRDKitInfoTheory.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 17%] Built target rdInfoTheory
make -f Code/ML/Data/CMakeFiles/cQuantize.dir/build.make Code/ML/Data/CMakeFiles/cQuantize.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ML/Data /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Data /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Data/CMakeFiles/cQuantize.dir/DependInfo.cmake --color=
Scanning dependencies of target cQuantize
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ML/Data/CMakeFiles/cQuantize.dir/build.make Code/ML/Data/CMakeFiles/cQuantize.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 17%] Building CXX object Code/ML/Data/CMakeFiles/cQuantize.dir/cQuantize.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Data && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DcQuantize_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/cQuantize.dir/cQuantize.cpp.o -c /<<PKGBUILDDIR>>/Code/ML/Data/cQuantize.cpp
[ 17%] Building CXX object Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/rdSimDivPickers.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSimDivPickers_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdSimDivPickers.dir/rdSimDivPickers.cpp.o -c /<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/rdSimDivPickers.cpp
[ 17%] Linking CXX shared module ../../../rdkit/ML/Data/cQuantize.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Data && /usr/bin/cmake -E cmake_link_script CMakeFiles/cQuantize.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/ML/Data/cQuantize.so CMakeFiles/cQuantize.dir/cQuantize.cpp.o  ../../../lib/libRDKitInfoTheory.so.1.2019.09.1 ../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 17%] Built target cQuantize
make -f Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/DependInfo.cmake --color=
Scanning dependencies of target ChemicalFeatures
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 18%] Building CXX object Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/FreeChemicalFeature.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures && /usr/bin/c++  -DChemicalFeatures_EXPORTS -DRDKIT_CHEMICALFEATURES_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ChemicalFeatures.dir/FreeChemicalFeature.cpp.o -c /<<PKGBUILDDIR>>/Code/ChemicalFeatures/FreeChemicalFeature.cpp
[ 18%] Linking CXX shared module ../../../rdkit/SimDivFilters/rdSimDivPickers.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdSimDivPickers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/SimDivFilters/rdSimDivPickers.so CMakeFiles/rdSimDivPickers.dir/MaxMinPicker.cpp.o CMakeFiles/rdSimDivPickers.dir/LeaderPicker.cpp.o CMakeFiles/rdSimDivPickers.dir/HierarchicalClusterPicker.cpp.o CMakeFiles/rdSimDivPickers.dir/rdSimDivPickers.cpp.o  ../../../lib/libRDKitSimDivPickers.so.1.2019.09.1 ../../../lib/libRDKithc.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 18%] Built target rdSimDivPickers
make -f Code/GraphMol/CMakeFiles/GraphMol.dir/build.make Code/GraphMol/CMakeFiles/GraphMol.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/GraphMol.dir/DependInfo.cmake --color=
Scanning dependencies of target GraphMol
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/GraphMol.dir/build.make Code/GraphMol/CMakeFiles/GraphMol.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 19%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Atom.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/Atom.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Atom.cpp
[ 19%] Linking CXX shared library ../../lib/libRDKitChemicalFeatures.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures && /usr/bin/cmake -E cmake_link_script CMakeFiles/ChemicalFeatures.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitChemicalFeatures.so.1 -o ../../lib/libRDKitChemicalFeatures.so.1.2019.09.1 CMakeFiles/ChemicalFeatures.dir/FreeChemicalFeature.cpp.o  ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitChemicalFeatures.so.1.2019.09.1 ../../lib/libRDKitChemicalFeatures.so.1 ../../lib/libRDKitChemicalFeatures.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 19%] Built target ChemicalFeatures
make -f Code/Numerics/Alignment/CMakeFiles/Alignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/Alignment.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/Alignment /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/CMakeFiles/Alignment.dir/DependInfo.cmake --color=
Scanning dependencies of target Alignment
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Numerics/Alignment/CMakeFiles/Alignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/Alignment.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 19%] Building CXX object Code/Numerics/Alignment/CMakeFiles/Alignment.dir/AlignPoints.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment && /usr/bin/c++  -DAlignment_EXPORTS -DRDKIT_ALIGNMENT_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Alignment.dir/AlignPoints.cpp.o -c /<<PKGBUILDDIR>>/Code/Numerics/Alignment/AlignPoints.cpp
[ 19%] Linking CXX executable testConrec
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics && /usr/bin/cmake -E cmake_link_script CMakeFiles/testConrec.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testConrec.dir/testConrec.cpp.o  -o testConrec  ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 19%] Built target testConrec
make -f Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/DependInfo.cmake --color=
Scanning dependencies of target testChemicalFeatures
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 19%] Building CXX object Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/testChemicalFeatures.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures && /usr/bin/c++  -DRDKIT_CHEMICALFEATURES_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testChemicalFeatures.dir/testChemicalFeatures.cpp.o -c /<<PKGBUILDDIR>>/Code/ChemicalFeatures/testChemicalFeatures.cpp
[ 19%] Linking CXX shared library ../../../lib/libRDKitAlignment.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment && /usr/bin/cmake -E cmake_link_script CMakeFiles/Alignment.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitAlignment.so.1 -o ../../../lib/libRDKitAlignment.so.1.2019.09.1 CMakeFiles/Alignment.dir/AlignPoints.cpp.o  ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1 ../../../lib/libRDKitAlignment.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 19%] Built target Alignment
make -f Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/Alignment /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/DependInfo.cmake --color=
Scanning dependencies of target testAlignment
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 19%] Building CXX object Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/testAlignment.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment && /usr/bin/c++  -DRDKIT_ALIGNMENT_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testAlignment.dir/testAlignment.cpp.o -c /<<PKGBUILDDIR>>/Code/Numerics/Alignment/testAlignment.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 20%] Linking CXX executable testChemicalFeatures
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures && /usr/bin/cmake -E cmake_link_script CMakeFiles/testChemicalFeatures.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testChemicalFeatures.dir/testChemicalFeatures.cpp.o  -o testChemicalFeatures  ../../lib/libRDKitChemicalFeatures.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 20%] Built target testChemicalFeatures
make -f Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build.make Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/Alignment/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/DependInfo.cmake --color=
Scanning dependencies of target rdAlignment
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build.make Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 21%] Building CXX object Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/rdAlignment.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdAlignment_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdAlignment.dir/rdAlignment.cpp.o -c /<<PKGBUILDDIR>>/Code/Numerics/Alignment/Wrap/rdAlignment.cpp
[ 21%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/QueryAtom.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/QueryAtom.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/QueryAtom.cpp
[ 21%] Linking CXX executable pickersTestsCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/cmake -E cmake_link_script CMakeFiles/pickersTestsCatch.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/pickersTestsCatch.dir/catch_tests.cpp.o  -o pickersTestsCatch  ../../lib/libRDKitSimDivPickers.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 ../../lib/libRDKithc.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 21%] Built target pickersTestsCatch
[ 21%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/QueryBond.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/QueryBond.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/QueryBond.cpp
[ 21%] Linking CXX executable testAlignment
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment && /usr/bin/cmake -E cmake_link_script CMakeFiles/testAlignment.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testAlignment.dir/testAlignment.cpp.o  -o testAlignment  ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 21%] Built target testAlignment
[ 21%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Bond.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/Bond.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Bond.cpp
In file included from /<<PKGBUILDDIR>>/Code/Numerics/Alignment/Wrap/rdAlignment.cpp:16:
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h: In member function 'T PySequenceHolder<T>::operator[](unsigned int) const [with T = double]':
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
   68 |       T res = python::extract<T>(d_seq[which]);
      |         ^~~
[ 21%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/MolOps.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/MolOps.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.cpp
[ 21%] Linking CXX shared module ../../../../rdkit/Numerics/rdAlignment.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdAlignment.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Numerics/rdAlignment.so CMakeFiles/rdAlignment.dir/rdAlignment.cpp.o  ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
[ 21%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/FindRings.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/FindRings.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FindRings.cpp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 21%] Built target rdAlignment
[ 21%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/ROMol.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/ROMol.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.cpp
[ 22%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/RWMol.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/RWMol.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.cpp
/<<PKGBUILDDIR>>/Code/GraphMol/FindRings.cpp: In function 'int RDKit::MolOps::symmetrizeSSSR(RDKit::ROMol&, RDKit::VECT_INT_VECT&)':
/<<PKGBUILDDIR>>/Code/GraphMol/FindRings.cpp:1103:16: warning: variable 'nsssr' set but not used [-Wunused-but-set-variable]
 1103 |   unsigned int nsssr;
      |                ^~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.cpp:16:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.cpp:16:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.cpp:16:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.cpp:17:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FindRings.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In function 'std::map<T, boost::shared_ptr<RDKit::ROMol> > RDKit::MolOps::getMolFragsWithQuery(const RDKit::ROMol&, T (*)(const RDKit::ROMol&, const RDKit::Atom*), bool, const std::vector<T>*, bool) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function 'std::map<T, boost::shared_ptr<RDKit::ROMol> > RDKit::MolOps::getMolFragsWithQuery(const RDKit::ROMol&, T (*)(const RDKit::ROMol&, const RDKit::Atom*), bool, const std::vector<T>*, bool) [with T = int]':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function 'std::map<T, boost::shared_ptr<RDKit::ROMol> > RDKit::MolOps::getMolFragsWithQuery(const RDKit::ROMol&, T (*)(const RDKit::ROMol&, const RDKit::Atom*), bool, const std::vector<T>*, bool) [with T = unsigned int]':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.cpp:16:
/usr/include/c++/9/bits/stl_vector.h: In member function 'void RDKit::RWMol::insertMol(const RDKit::ROMol&)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::vector<std::__cxx11::basic_string<char> >]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In function 'std::vector<boost::shared_ptr<RDKit::ROMol> > RDKit::MolOps::getMolFrags(const RDKit::ROMol&, bool, RDKit::INT_VECT*, RDKit::VECT_INT_VECT*, bool)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.cpp:11:
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In member function 'unsigned int RDKit::RWMol::addAtom(bool)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.cpp:17:
/usr/include/c++/9/bits/stl_vector.h: In member function 'unsigned int RDKit::ROMol::addAtom(RDKit::Atom*, bool, bool)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 22%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/PeriodicTable.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/PeriodicTable.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/PeriodicTable.cpp
[ 22%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/atomic_data.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/atomic_data.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/atomic_data.cpp
[ 22%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/QueryOps.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/QueryOps.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.cpp
[ 22%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/MolPickler.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/MolPickler.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/PeriodicTable.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/PeriodicTable.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDKit::atomicData&}; _Tp = RDKit::atomicData; _Alloc = std::allocator<RDKit::atomicData>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::atomicData>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::atomicData*, std::vector<RDKit::atomicData> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/PeriodicTable.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/PeriodicTable.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::PeriodicTable::PeriodicTable()':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::atomicData*, std::vector<RDKit::atomicData> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 22%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Canon.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/Canon.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Canon.cpp
[ 23%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/AtomIterators.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/AtomIterators.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/AtomIterators.cpp
[ 23%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/BondIterators.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/BondIterators.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/BondIterators.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Canon.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.cpp:10:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 23%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Aromaticity.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/Aromaticity.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Aromaticity.cpp
[ 23%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Kekulize.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/Kekulize.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Kekulize.cpp
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.cpp:10:
/usr/include/c++/9/bits/stl_vector.h: In static member function 'static void RDKit::MolPickler::_addAtomFromPickleV1(std::istream&, RDKit::ROMol*)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 23%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/MolDiscriminators.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/MolDiscriminators.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDiscriminators.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Aromaticity.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDiscriminators.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 23%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/ConjugHybrid.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/ConjugHybrid.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ConjugHybrid.cpp
[ 23%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/AddHs.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/AddHs.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/AddHs.cpp
[ 24%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Matrices.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/Matrices.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Matrices.cpp
[ 24%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Chirality.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/Chirality.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Chirality.cpp
[ 24%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/RingInfo.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/RingInfo.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/RingInfo.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Matrices.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/AddHs.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/AddHs.cpp:10:
/usr/include/c++/9/bits/stl_vector.h: In member function 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/AddHs.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 24%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Conformer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/Conformer.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.cpp
[ 24%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Renumber.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/Renumber.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Renumber.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Chirality.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/AddHs.cpp:10:
/usr/include/c++/9/bits/stl_vector.h: In function 'void RDKit::{anonymous}::setHydrogenCoords(RDKit::ROMol*, unsigned int, unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 24%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/AdjustQuery.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/AdjustQuery.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/AdjustQuery.cpp
[ 25%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Resonance.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/Resonance.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Resonance.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Renumber.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Renumber.cpp:10:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Renumber.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Renumber.cpp:10:
/usr/include/c++/9/bits/stl_vector.h: In function 'RDKit::ROMol* RDKit::MolOps::renumberAtoms(const RDKit::ROMol&, const std::vector<unsigned int>&)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 25%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/StereoGroup.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/StereoGroup.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/StereoGroup.cpp
[ 25%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/new_canon.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/new_canon.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/new_canon.cpp
[ 25%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/SubstanceGroup.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/SubstanceGroup.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::array<RDGeom::Point3D, 3>&}; _Tp = std::array<RDGeom::Point3D, 3>; _Alloc = std::allocator<std::array<RDGeom::Point3D, 3> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::array<RDGeom::Point3D, 3> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::array<RDGeom::Point3D, 3>*, std::vector<std::array<RDGeom::Point3D, 3> > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In member function 'void RDKit::SubstanceGroup::addBracket(const Bracket&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::array<RDGeom::Point3D, 3>*, std::vector<std::array<RDGeom::Point3D, 3> > >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Resonance.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::SubstanceGroup::CState}; _Tp = RDKit::SubstanceGroup::CState; _Alloc = std::allocator<RDKit::SubstanceGroup::CState>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::SubstanceGroup::CState>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::SubstanceGroup::CState*, std::vector<RDKit::SubstanceGroup::CState> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In function 'void RDKit::ResonanceUtils::fixExplicitImplicitHs(RDKit::ROMol&)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::SubstanceGroup::addCState(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::SubstanceGroup::CState*, std::vector<RDKit::SubstanceGroup::CState> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In constructor 'RDKit::SubstanceGroup::SubstanceGroup(RDKit::ROMol*, const string&)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 25%] Linking CXX shared library ../../lib/libRDKitGraphMol.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/GraphMol.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitGraphMol.so.1 -o ../../lib/libRDKitGraphMol.so.1.2019.09.1 CMakeFiles/GraphMol.dir/Atom.cpp.o CMakeFiles/GraphMol.dir/QueryAtom.cpp.o CMakeFiles/GraphMol.dir/QueryBond.cpp.o CMakeFiles/GraphMol.dir/Bond.cpp.o CMakeFiles/GraphMol.dir/MolOps.cpp.o CMakeFiles/GraphMol.dir/FindRings.cpp.o CMakeFiles/GraphMol.dir/ROMol.cpp.o CMakeFiles/GraphMol.dir/RWMol.cpp.o CMakeFiles/GraphMol.dir/PeriodicTable.cpp.o CMakeFiles/GraphMol.dir/atomic_data.cpp.o CMakeFiles/GraphMol.dir/QueryOps.cpp.o CMakeFiles/GraphMol.dir/MolPickler.cpp.o CMakeFiles/GraphMol.dir/Canon.cpp.o CMakeFiles/GraphMol.dir/AtomIterators.cpp.o CMakeFiles/GraphMol.dir/BondIterators.cpp.o CMakeFiles/GraphMol.dir/Aromaticity.cpp.o CMakeFiles/GraphMol.dir/Kekulize.cpp.o CMakeFiles/GraphMol.dir/MolDiscriminators.cpp.o CMakeFiles/GraphMol.dir/ConjugHybrid.cpp.o CMakeFiles/GraphMol.dir/AddHs.cpp.o CMakeFiles/GraphMol.dir/Matrices.cpp.o CMakeFiles/GraphMol.dir/Chirality.cpp.o CMakeFiles/GraphMol.dir/RingInfo.cpp.o CMakeFiles/GraphMol.dir/Conformer.cpp.o CMakeFiles/GraphMol.dir/Renumber.cpp.o CMakeFiles/GraphMol.dir/AdjustQuery.cpp.o CMakeFiles/GraphMol.dir/Resonance.cpp.o CMakeFiles/GraphMol.dir/StereoGroup.cpp.o CMakeFiles/GraphMol.dir/new_canon.cpp.o CMakeFiles/GraphMol.dir/SubstanceGroup.cpp.o  ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1 ../../lib/libRDKitGraphMol.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 25%] Built target GraphMol
make -f Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/depend
make -f Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/depend
make -f Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/depend
make -f Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/DependInfo.cmake --color=
Scanning dependencies of target Trajectory
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/build
Scanning dependencies of target MolTransforms
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/build
Scanning dependencies of target SubstructMatch
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 26%] Building CXX object Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/Trajectory.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_TRAJECTORY_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DTrajectory_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Trajectory.dir/Trajectory.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Trajectory.cpp
[ 26%] Building CXX object Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/MolTransforms.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms && /usr/bin/c++  -DMolTransforms_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLTRANSFORMS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolTransforms.dir/MolTransforms.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/MolTransforms.cpp
[ 26%] Building CXX object Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/SubstructMatch.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBSTRUCTMATCH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubstructMatch_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SubstructMatch.dir/SubstructMatch.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.cpp
Scanning dependencies of target SmilesParse
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 26%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmilesParse.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SmilesParse.dir/SmilesParse.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesParse.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Trajectory.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Trajectory.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Trajectory.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDKit::Snapshot&}; _Tp = RDKit::Snapshot; _Alloc = std::allocator<RDKit::Snapshot>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Snapshot>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(std::vector<_Tp, _Alloc>::const_iterator, const value_type&) [with _Tp = RDKit::Snapshot; _Alloc = std::allocator<RDKit::Snapshot>]':
/usr/include/c++/9/bits/vector.tcc:130:5: note: parameter passing for argument of type 'std::vector<RDKit::Snapshot>::const_iterator' {aka '__gnu_cxx::__normal_iterator<const RDKit::Snapshot*, std::vector<RDKit::Snapshot> >'} changed in GCC 7.1
  130 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:161:2: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
  161 |  _M_realloc_insert(begin() + (__position - cbegin()), __x);
      |  ^~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Trajectory.cpp: In member function 'unsigned int RDKit::Trajectory::insertSnapshot(unsigned int, RDKit::Snapshot)':
/<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Trajectory.cpp:73:74: note: parameter passing for argument of type 'std::vector<RDKit::Snapshot>::const_iterator' {aka '__gnu_cxx::__normal_iterator<const RDKit::Snapshot*, std::vector<RDKit::Snapshot> >'} changed in GCC 7.1
   73 |   return (d_snapshotVect->insert(d_snapshotVect->begin() + snapshotNum, s) -
      |                                                                          ^
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Trajectory.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In member function 'unsigned int RDKit::Trajectory::addConformersToMol(RDKit::ROMol&, int, int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesParse.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesParse.cpp:26:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
[ 26%] Linking CXX shared library ../../../lib/libRDKitTrajectory.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory && /usr/bin/cmake -E cmake_link_script CMakeFiles/Trajectory.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitTrajectory.so.1 -o ../../../lib/libRDKitTrajectory.so.1.2019.09.1 CMakeFiles/Trajectory.dir/Trajectory.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1 ../../../lib/libRDKitTrajectory.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 26%] Built target Trajectory
[ 26%] Building CXX object Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/SubstructUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBSTRUCTMATCH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubstructMatch_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SubstructMatch.dir/SubstructUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructUtils.cpp
[ 26%] Linking CXX shared library ../../../lib/libRDKitMolTransforms.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolTransforms.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitMolTransforms.so.1 -o ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 CMakeFiles/MolTransforms.dir/MolTransforms.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1 ../../../lib/libRDKitMolTransforms.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 26%] Built target MolTransforms
make -f Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/DependInfo.cmake --color=
Scanning dependencies of target Subgraphs
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 26%] Building CXX object Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/Subgraphs.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBGRAPHS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubgraphs_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Subgraphs.dir/Subgraphs.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/Subgraphs.cpp
[ 26%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmilesParseOps.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SmilesParse.dir/SmilesParseOps.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesParseOps.cpp
[ 26%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmilesWrite.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SmilesParse.dir/SmilesWrite.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesWrite.cpp
[ 26%] Linking CXX shared library ../../../lib/libRDKitSubstructMatch.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/cmake -E cmake_link_script CMakeFiles/SubstructMatch.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitSubstructMatch.so.1 -o ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 CMakeFiles/SubstructMatch.dir/SubstructMatch.cpp.o CMakeFiles/SubstructMatch.dir/SubstructUtils.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1 ../../../lib/libRDKitSubstructMatch.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 26%] Built target SubstructMatch
[ 27%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmartsWrite.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SmilesParse.dir/SmartsWrite.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmartsWrite.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesParseOps.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
[ 28%] Building CXX object Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/SubgraphUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBGRAPHS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubgraphs_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Subgraphs.dir/SubgraphUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/SubgraphUtils.cpp
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesWrite.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesWrite.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmartsWrite.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmartsWrite.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In function 'std::string RDKit::{anonymous}::getAtomSmartsSimple(const RDKit::QueryAtom*, const ATOM_EQUALS_QUERY*, bool&)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 28%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/CXSmilesOps.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SmilesParse.dir/CXSmilesOps.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/CXSmilesOps.cpp
/usr/include/c++/9/bits/vector.tcc: In function 'std::string RDKit::SmartsWrite::GetAtomSmarts(const RDKit::QueryAtom*)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In function 'std::string RDKit::{anonymous}::molToSmarts(const RDKit::ROMol&, bool, std::vector<RDKit::Canon::AtomColors>&&, const boost::dynamic_bitset<>*)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/Subgraphs.h:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/SubgraphUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/SubgraphUtils.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/Subgraphs.h:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/SubgraphUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/SubgraphUtils.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function 'RDKit::ROMol* RDKit::Subgraphs::pathToSubmol(const RDKit::ROMol&, const PATH_TYPE&, bool, RDKit::INT_MAP_INT&)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 28%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/smarts.tab.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SmilesParse.dir/smarts.tab.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/smarts.tab.cpp
make -f Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/DependInfo.cmake --color=
Scanning dependencies of target PartialCharges
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 28%] Building CXX object Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/GasteigerCharges.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges && /usr/bin/c++  -DPartialCharges_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_PARTIALCHARGES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/PartialCharges.dir/GasteigerCharges.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerCharges.cpp
[ 28%] Linking CXX shared library ../../../lib/libRDKitSubgraphs.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/cmake -E cmake_link_script CMakeFiles/Subgraphs.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitSubgraphs.so.1 -o ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 CMakeFiles/Subgraphs.dir/Subgraphs.cpp.o CMakeFiles/Subgraphs.dir/SubgraphUtils.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1 ../../../lib/libRDKitSubgraphs.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 28%] Built target Subgraphs
[ 29%] Building CXX object Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/GasteigerParams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges && /usr/bin/c++  -DPartialCharges_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_PARTIALCHARGES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/PartialCharges.dir/GasteigerParams.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerParams.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerCharges.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerCharges.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function.hpp:30,
                 from /usr/include/boost/algorithm/string/detail/find_iterator.hpp:18,
                 from /usr/include/boost/algorithm/string/find_iterator.hpp:24,
                 from /usr/include/boost/algorithm/string/iter_find.hpp:27,
                 from /usr/include/boost/algorithm/string/split.hpp:16,
                 from /usr/include/boost/algorithm/string.hpp:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/CXSmilesOps.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function.hpp:30,
                 from /usr/include/boost/algorithm/string/detail/find_iterator.hpp:18,
                 from /usr/include/boost/algorithm/string/find_iterator.hpp:24,
                 from /usr/include/boost/algorithm/string/iter_find.hpp:27,
                 from /usr/include/boost/algorithm/string/split.hpp:16,
                 from /usr/include/boost/algorithm/string.hpp:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/CXSmilesOps.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function.hpp:30,
                 from /usr/include/boost/algorithm/string/detail/find_iterator.hpp:18,
                 from /usr/include/boost/algorithm/string/find_iterator.hpp:24,
                 from /usr/include/boost/algorithm/string/iter_find.hpp:27,
                 from /usr/include/boost/algorithm/string/split.hpp:16,
                 from /usr/include/boost/algorithm/string.hpp:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/CXSmilesOps.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerCharges.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerCharges.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In function 'void RDKit::computeGasteigerCharges(const RDKit::ROMol&, std::vector<double>&, int, bool)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from smarts.yy:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
make -f Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build.make Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/DependInfo.cmake --color=
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
Scanning dependencies of target rdMolTransforms
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build.make Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 29%] Building CXX object Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/rdMolTransforms.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolTransforms_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMolTransforms.dir/rdMolTransforms.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/Wrap/rdMolTransforms.cpp
[ 29%] Linking CXX shared library ../../../lib/libRDKitPartialCharges.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges && /usr/bin/cmake -E cmake_link_script CMakeFiles/PartialCharges.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitPartialCharges.so.1 -o ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 CMakeFiles/PartialCharges.dir/GasteigerCharges.cpp.o CMakeFiles/PartialCharges.dir/GasteigerParams.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1 ../../../lib/libRDKitPartialCharges.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 29%] Built target PartialCharges
[ 29%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/smiles.tab.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SmilesParse.dir/smiles.tab.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/smiles.tab.cpp
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function.hpp:30,
                 from /usr/include/boost/algorithm/string/detail/find_iterator.hpp:18,
                 from /usr/include/boost/algorithm/string/find_iterator.hpp:24,
                 from /usr/include/boost/algorithm/string/iter_find.hpp:27,
                 from /usr/include/boost/algorithm/string/split.hpp:16,
                 from /usr/include/boost/algorithm/string.hpp:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/CXSmilesOps.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In function 'bool SmilesParseOps::parser::parse_coords(Iterator&, Iterator, RDKit::RWMol&) [with Iterator = __gnu_cxx::__normal_iterator<const char*, std::__cxx11::basic_string<char> >]':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 29%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/lex.yysmarts.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SmilesParse.dir/lex.yysmarts.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/lex.yysmarts.cpp
[ 29%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/lex.yysmiles.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SmilesParse.dir/lex.yysmiles.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/lex.yysmiles.cpp
In file included from /usr/include/c++/9/vector:72,
                 from smiles.yy:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
make -f Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/DependInfo.cmake --color=
Scanning dependencies of target ShapeHelpers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 29%] Building CXX object Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/ShapeEncoder.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SHAPEHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DShapeHelpers_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ShapeHelpers.dir/ShapeEncoder.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/ShapeEncoder.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from smiles.ll:25:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
[ 29%] Building CXX object Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/ShapeUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SHAPEHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DShapeHelpers_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ShapeHelpers.dir/ShapeUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/ShapeUtils.cpp
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 29%] Linking CXX shared module ../../../../rdkit/Chem/rdMolTransforms.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolTransforms.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdMolTransforms.so CMakeFiles/rdMolTransforms.dir/rdMolTransforms.cpp.o  ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 29%] Built target rdMolTransforms
make -f Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/DependInfo.cmake --color=
Scanning dependencies of target MolCatalog
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 29%] Building CXX object Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/MolCatalogEntry.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog && /usr/bin/c++  -DMolCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolCatalog.dir/MolCatalogEntry.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/MolCatalogEntry.cpp
[ 30%] Linking CXX shared library ../../../lib/libRDKitSmilesParse.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/SmilesParse.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitSmilesParse.so.1 -o ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 CMakeFiles/SmilesParse.dir/SmilesParse.cpp.o CMakeFiles/SmilesParse.dir/SmilesParseOps.cpp.o CMakeFiles/SmilesParse.dir/SmilesWrite.cpp.o CMakeFiles/SmilesParse.dir/SmartsWrite.cpp.o CMakeFiles/SmilesParse.dir/CXSmilesOps.cpp.o CMakeFiles/SmilesParse.dir/smarts.tab.cpp.o CMakeFiles/SmilesParse.dir/smiles.tab.cpp.o CMakeFiles/SmilesParse.dir/lex.yysmarts.cpp.o CMakeFiles/SmilesParse.dir/lex.yysmiles.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1 ../../../lib/libRDKitSmilesParse.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 30%] Built target SmilesParse
[ 31%] Building CXX object Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/MolCatalogParams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog && /usr/bin/c++  -DMolCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolCatalog.dir/MolCatalogParams.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/MolCatalogParams.cpp
make -f Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/DependInfo.cmake --color=
Scanning dependencies of target MolInterchange
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 31%] Building CXX object Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/Parser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange && /usr/bin/c++  -DMolInterchange_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLINTERCHANGE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/rapidjson -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolInterchange.dir/Parser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/Parser.cpp
[ 31%] Building CXX object Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/Writer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange && /usr/bin/c++  -DMolInterchange_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLINTERCHANGE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/rapidjson -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolInterchange.dir/Writer.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/Writer.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/ShapeUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/ShapeUtils.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/ShapeUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/ShapeUtils.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In function 'std::vector<double> RDKit::MolShapes::getConfDimensions(const RDKit::Conformer&, double, const RDGeom::Point3D*, bool)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 31%] Linking CXX shared library ../../../lib/libRDKitShapeHelpers.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/ShapeHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitShapeHelpers.so.1 -o ../../../lib/libRDKitShapeHelpers.so.1.2019.09.1 CMakeFiles/ShapeHelpers.dir/ShapeEncoder.cpp.o CMakeFiles/ShapeHelpers.dir/ShapeUtils.cpp.o  ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitShapeHelpers.so.1.2019.09.1 ../../../lib/libRDKitShapeHelpers.so.1 ../../../lib/libRDKitShapeHelpers.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 31%] Built target ShapeHelpers
make -f Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/DependInfo.cmake --color=
Scanning dependencies of target SLNParse
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 31%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/SLNParse.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SLNPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSLNParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SLNParse.dir/SLNParse.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNParse.cpp
[ 31%] Linking CXX shared library ../../../lib/libRDKitMolCatalog.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolCatalog.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitMolCatalog.so.1 -o ../../../lib/libRDKitMolCatalog.so.1.2019.09.1 CMakeFiles/MolCatalog.dir/MolCatalogEntry.cpp.o CMakeFiles/MolCatalog.dir/MolCatalogParams.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolCatalog.so.1.2019.09.1 ../../../lib/libRDKitMolCatalog.so.1 ../../../lib/libRDKitMolCatalog.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 31%] Built target MolCatalog
make -f Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/DependInfo.cmake --color=
Scanning dependencies of target rdqueries
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 31%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/rdqueries.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdqueries_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdqueries.dir/rdqueries.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/rdqueries.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/Parser.cpp:16:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/Parser.cpp:16:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/Parser.cpp:16:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/Parser.cpp:16:
/usr/include/c++/9/bits/stl_vector.h: In function 'void RDKit::MolInterchange::{anonymous}::readConformer(RDKit::Conformer*, const Value&)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNParse.cpp:35:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In function 'void RDKit::SLNParse::finalizeQueryMol(RDKit::ROMol*, bool)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 31%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/Queries.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdqueries_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdqueries.dir/Queries.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Queries.cpp
[ 31%] Linking CXX shared library ../../../lib/libRDKitMolInterchange.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolInterchange.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitMolInterchange.so.1 -o ../../../lib/libRDKitMolInterchange.so.1.2019.09.1 CMakeFiles/MolInterchange.dir/Parser.cpp.o CMakeFiles/MolInterchange.dir/Writer.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolInterchange.so.1.2019.09.1 ../../../lib/libRDKitMolInterchange.so.1 ../../../lib/libRDKitMolInterchange.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 31%] Built target MolInterchange
[ 31%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/SLNAttribs.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SLNPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSLNParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SLNParse.dir/SLNAttribs.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNAttribs.cpp
[ 32%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/sln.tab.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SLNPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSLNParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SLNParse.dir/sln.tab.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/sln.tab.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNAttribs.h:39,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNAttribs.cpp:37:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
[ 32%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/lex.yysln.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SLNPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSLNParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SLNParse.dir/lex.yysln.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/lex.yysln.cpp
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from sln.yy:41:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
make -f Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/DependInfo.cmake --color=
Scanning dependencies of target rdtrajectory
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 32%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/Trajectory.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdtrajectory_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdtrajectory.dir/Trajectory.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Trajectory.cpp
[ 32%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/rdTrajectory.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdtrajectory_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdtrajectory.dir/rdTrajectory.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/rdTrajectory.cpp
[ 32%] Linking CXX shared library ../../../lib/libRDKitSLNParse.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/SLNParse.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitSLNParse.so.1 -o ../../../lib/libRDKitSLNParse.so.1.2019.09.1 CMakeFiles/SLNParse.dir/SLNParse.cpp.o CMakeFiles/SLNParse.dir/SLNAttribs.cpp.o CMakeFiles/SLNParse.dir/sln.tab.cpp.o CMakeFiles/SLNParse.dir/lex.yysln.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitSLNParse.so.1.2019.09.1 ../../../lib/libRDKitSLNParse.so.1 ../../../lib/libRDKitSLNParse.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 32%] Built target SLNParse
make -f Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build.make Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ChemicalFeatures/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/DependInfo.cmake --color=
Scanning dependencies of target rdChemicalFeatures
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build.make Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 33%] Building CXX object Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/rdChemicalFeatures.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdChemicalFeatures_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdChemicalFeatures.dir/rdChemicalFeatures.cpp.o -c /<<PKGBUILDDIR>>/Code/ChemicalFeatures/Wrap/rdChemicalFeatures.cpp
[ 33%] Building CXX object Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/FreeChemicalFeature.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdChemicalFeatures_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdChemicalFeatures.dir/FreeChemicalFeature.cpp.o -c /<<PKGBUILDDIR>>/Code/ChemicalFeatures/Wrap/FreeChemicalFeature.cpp
[ 33%] Linking CXX shared module ../../../rdkit/Chem/rdqueries.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdqueries.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/Chem/rdqueries.so CMakeFiles/rdqueries.dir/rdqueries.cpp.o CMakeFiles/rdqueries.dir/Queries.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 33%] Built target rdqueries
make -f Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/Optimizer /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/DependInfo.cmake --color=
Scanning dependencies of target Optimizer
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 33%] Building CXX object Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/BFGSOpt.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer && /usr/bin/c++  -DOptimizer_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_OPTIMIZER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Optimizer.dir/BFGSOpt.cpp.o -c /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/BFGSOpt.cpp
[ 33%] Building CXX object Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/LinearSearch.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer && /usr/bin/c++  -DOptimizer_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_OPTIMIZER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Optimizer.dir/LinearSearch.cpp.o -c /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/LinearSearch.cpp
[ 34%] Linking CXX shared module ../../../rdkit/Chem/rdtrajectory.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdtrajectory.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/Chem/rdtrajectory.so CMakeFiles/rdtrajectory.dir/Trajectory.cpp.o CMakeFiles/rdtrajectory.dir/rdTrajectory.cpp.o  ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitRDBoost.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 34%] Built target rdtrajectory
make -f Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/DependInfo.cmake --color=
Scanning dependencies of target graphmolSGroupCatch
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 34%] Building CXX object Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/catch_sgroups.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/graphmolSGroupCatch.dir/catch_sgroups.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/catch_sgroups.cpp
make -f Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/DependInfo.cmake --color=
Scanning dependencies of target graphmolqueryTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 34%] Building CXX object Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/querytest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/graphmolqueryTest.dir/querytest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/querytest.cpp
[ 34%] Linking CXX shared library ../../../lib/libRDKitOptimizer.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer && /usr/bin/cmake -E cmake_link_script CMakeFiles/Optimizer.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitOptimizer.so.1 -o ../../../lib/libRDKitOptimizer.so.1.2019.09.1 CMakeFiles/Optimizer.dir/BFGSOpt.cpp.o CMakeFiles/Optimizer.dir/LinearSearch.cpp.o  ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1 ../../../lib/libRDKitOptimizer.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 34%] Built target Optimizer
make -f Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolcpTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolcpTest.dir/DependInfo.cmake --color=
Scanning dependencies of target graphmolcpTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Building CXX object Code/GraphMol/CMakeFiles/graphmolcpTest.dir/cptest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/graphmolcpTest.dir/cptest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/cptest.cpp
[ 35%] Linking CXX shared module ../../../rdkit/Chem/rdChemicalFeatures.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdChemicalFeatures.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/Chem/rdChemicalFeatures.so CMakeFiles/rdChemicalFeatures.dir/rdChemicalFeatures.cpp.o CMakeFiles/rdChemicalFeatures.dir/FreeChemicalFeature.cpp.o  ../../../lib/libRDKitChemicalFeatures.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Built target rdChemicalFeatures
make -f Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/DependInfo.cmake --color=
Scanning dependencies of target graphmolMemTest1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Building CXX object Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/memtest1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/graphmolMemTest1.dir/memtest1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/memtest1.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/cptest.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/cptest.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/querytest.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 35%] Linking CXX executable graphmolcpTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolcpTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/graphmolcpTest.dir/cptest.cpp.o  -o graphmolcpTest  ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Built target graphmolcpTest
make -f Code/GraphMol/CMakeFiles/test-valgrind.dir/build.make Code/GraphMol/CMakeFiles/test-valgrind.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/test-valgrind.dir/DependInfo.cmake --color=
Scanning dependencies of target test-valgrind
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/test-valgrind.dir/build.make Code/GraphMol/CMakeFiles/test-valgrind.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Building CXX object Code/GraphMol/CMakeFiles/test-valgrind.dir/test-valgrind.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/test-valgrind.dir/test-valgrind.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/test-valgrind.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/memtest1.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 35%] Linking CXX executable graphmolMemTest1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolMemTest1.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/graphmolMemTest1.dir/memtest1.cpp.o  -o graphmolMemTest1  ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Built target graphmolMemTest1
make -f Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolIterTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolIterTest.dir/DependInfo.cmake --color=
Scanning dependencies of target graphmolIterTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Building CXX object Code/GraphMol/CMakeFiles/graphmolIterTest.dir/itertest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/graphmolIterTest.dir/itertest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/itertest.cpp
[ 35%] Linking CXX executable graphmolqueryTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolqueryTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/graphmolqueryTest.dir/querytest.cpp.o  -o graphmolqueryTest  ../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Built target graphmolqueryTest
make -f Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/DependInfo.cmake --color=
Scanning dependencies of target ChemTransforms
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Building CXX object Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/ChemTransforms.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/c++  -DChemTransforms_EXPORTS -DRDKIT_CHEMTRANSFORMS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ChemTransforms.dir/ChemTransforms.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/ChemTransforms.cpp
[ 35%] Linking CXX executable test-valgrind
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-valgrind.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test-valgrind.dir/test-valgrind.cpp.o  -o test-valgrind  ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Built target test-valgrind
[ 35%] Building CXX object Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/MolFragmenter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/c++  -DChemTransforms_EXPORTS -DRDKIT_CHEMTRANSFORMS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ChemTransforms.dir/MolFragmenter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/MolFragmenter.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/catch_sgroups.cpp:14:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/catch_sgroups.cpp:14:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 35%] Linking CXX executable graphmolIterTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolIterTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/graphmolIterTest.dir/itertest.cpp.o  -o graphmolIterTest  ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Built target graphmolIterTest
make -f Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/DependInfo.cmake --color=
Scanning dependencies of target smaTest1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/smatest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/smaTest1.dir/smatest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/smatest.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/ChemTransforms.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/ChemTransforms.cpp:10:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function 'void RDKit::{anonymous}::updateSubMolConfs(const RDKit::ROMol&, RDKit::RWMol&, boost::dynamic_bitset<>&)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function 'RDKit::ROMol* RDKit::combineMols(const RDKit::ROMol&, const RDKit::ROMol&, RDGeom::Point3D)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/MolFragmenter.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/MolFragmenter.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/catch_sgroups.cpp:14:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function 'RDKit::ROMol* RDKit::replaceCore(const RDKit::ROMol&, const RDKit::ROMol&, const MatchVectType&, bool, bool, bool)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/MolFragmenter.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/MolFragmenter.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In function 'RDKit::ROMol* RDKit::MolFragmenter::fragmentOnBonds(const RDKit::ROMol&, const std::vector<unsigned int>&, bool, const std::vector<std::pair<unsigned int, unsigned int> >*, const std::vector<RDKit::Bond::BondType>*, std::vector<unsigned int>*)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/DependInfo.cmake --color=
Scanning dependencies of target smiTest2
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/test2.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/smiTest2.dir/test2.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/test2.cpp
[ 35%] Linking CXX shared library ../../../lib/libRDKitChemTransforms.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/cmake -E cmake_link_script CMakeFiles/ChemTransforms.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitChemTransforms.so.1 -o ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 CMakeFiles/ChemTransforms.dir/ChemTransforms.cpp.o CMakeFiles/ChemTransforms.dir/MolFragmenter.cpp.o  ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1 ../../../lib/libRDKitChemTransforms.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Built target ChemTransforms
make -f Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/DependInfo.cmake --color=
Scanning dependencies of target FilterCatalog
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/Filters.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++  -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FilterCatalog.dir/Filters.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Filters.cpp
[ 35%] Linking CXX executable smiTest2
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/smiTest2.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/smiTest2.dir/test2.cpp.o  -o smiTest2  ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Built target smiTest2
make -f Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/DependInfo.cmake --color=
Scanning dependencies of target Fingerprints
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/Fingerprints.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Fingerprints.dir/Fingerprints.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.cpp
[ 35%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FilterCatalog.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++  -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FilterCatalog.dir/FilterCatalog.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalog.cpp
In file included from /usr/include/c++/9/algorithm:62,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:17,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.cpp:11:
/usr/include/c++/9/bits/stl_algo.h: In function '_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const unsigned int>]':
/usr/include/c++/9/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  112 |     __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last,
      |     ^~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/set:60,
                 from /<<PKGBUILDDIR>>/Code/Query/SetQuery.h:13,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.cpp:11:
/usr/include/c++/9/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<long long unsigned int&&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::vector<std::vector<int> > >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<std::vector<int> > >, std::_Select1st<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<std::vector<int> > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:17,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.cpp:11:
/usr/include/c++/9/bits/stl_algo.h: In function 'RDKit::SparseIntVect<long long unsigned int>* RDKit::getUnfoldedRDKFingerprintMol(const RDKit::ROMol&, unsigned int, unsigned int, bool, bool, bool, std::vector<unsigned int>*, const std::vector<unsigned int>*, std::vector<std::vector<long long unsigned int> >*, std::map<long long unsigned int, std::vector<std::vector<int> > >*)':
/usr/include/c++/9/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  161 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
  162 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.cpp:11:
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:26,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.cpp:11:
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<std::vector<int> > >, std::_Select1st<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<std::vector<int> > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.cpp:812:1: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
  812 | }
      | ^
[ 35%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/PatternFingerprints.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Fingerprints.dir/PatternFingerprints.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/PatternFingerprints.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.h:18,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalog.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalog.cpp:32:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void boost::archive::detail::iserializer<Archive, T>::load_object_data(boost::archive::detail::basic_iarchive&, void*, unsigned int) const [with Archive = boost::archive::text_iarchive; T = RDKit::FilterCatalogEntry]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 35%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/MorganFingerprints.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Fingerprints.dir/MorganFingerprints.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganFingerprints.cpp
[ 36%] Linking CXX executable smaTest1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/smaTest1.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/smaTest1.dir/smatest.cpp.o  -o smaTest1  ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 36%] Built target smaTest1
make -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/DependInfo.cmake --color=
Scanning dependencies of target testSubgraphs2
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 37%] Building CXX object Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/test2.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBGRAPHS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testSubgraphs2.dir/test2.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/test2.cpp
[ 37%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FilterCatalogEntry.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++  -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FilterCatalog.dir/FilterCatalogEntry.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalogEntry.cpp
[ 37%] Linking CXX executable graphmolSGroupCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolSGroupCatch.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/graphmolSGroupCatch.dir/catch_sgroups.cpp.o  -o graphmolSGroupCatch  ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 37%] Built target graphmolSGroupCatch
make -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/DependInfo.cmake --color=
Scanning dependencies of target testSubgraphs1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 37%] Building CXX object Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBGRAPHS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testSubgraphs1.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/test1.cpp
[ 37%] Linking CXX executable testSubgraphs2
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSubgraphs2.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testSubgraphs2.dir/test2.cpp.o  -o testSubgraphs2  ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 37%] Built target testSubgraphs2
[ 38%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FilterCatalogRunner.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++  -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FilterCatalog.dir/FilterCatalogRunner.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalogRunner.cpp
[ 39%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/AtomPairs.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Fingerprints.dir/AtomPairs.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairs.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalogEntry.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Filters.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalogEntry.cpp:32:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 39%] Linking CXX executable testSubgraphs1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSubgraphs1.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testSubgraphs1.dir/test1.cpp.o  -o testSubgraphs1  ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 39%] Built target testSubgraphs1
make -f Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/DependInfo.cmake --color=
Scanning dependencies of target FragCatalog
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 40%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatalogUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/c++  -DFragCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FragCatalog.dir/FragCatalogUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatalogUtils.cpp
make -f Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/DependInfo.cmake --color=
Scanning dependencies of target testPartialCharges
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 40%] Building CXX object Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_PARTIALCHARGES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testPartialCharges.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/test1.cpp
[ 40%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FilterMatchers.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++  -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FilterCatalog.dir/FilterMatchers.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.cpp
In file included from /usr/include/c++/9/set:60,
                 from /<<PKGBUILDDIR>>/Code/Query/SetQuery.h:13,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairs.cpp:11:
/usr/include/c++/9/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long int&>, std::tuple<>}; _Key = long long int; _Val = std::pair<const long long int, int>; _KeyOfValue = std::_Select1st<std::pair<const long long int, int> >; _Compare = std::less<long long int>; _Alloc = std::allocator<std::pair<const long long int, int> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<long long int, std::pair<const long long int, int>, std::_Select1st<std::pair<const long long int, int> >, std::less<long long int>, std::allocator<std::pair<const long long int, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long int, int> >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:26,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairs.cpp:11:
/usr/include/c++/9/bits/stl_map.h: In function 'RDKit::SparseIntVect<long long int>* RDKit::AtomPairs::getTopologicalTorsionFingerprint(const RDKit::ROMol&, unsigned int, const std::vector<unsigned int>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, bool)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<long long int, std::pair<const long long int, int>, std::_Select1st<std::pair<const long long int, int> >, std::less<long long int>, std::allocator<std::pair<const long long int, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long int, int> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In function 'void RDKit::AtomPairs::{anonymous}::TorsionFpCalc(T*, const RDKit::ROMol&, unsigned int, unsigned int, const std::vector<unsigned int>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, bool) [with T = RDKit::SparseIntVect<long long int>]':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<long long int, std::pair<const long long int, int>, std::_Select1st<std::pair<const long long int, int> >, std::less<long long int>, std::allocator<std::pair<const long long int, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long int, int> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 40%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/MACCS.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Fingerprints.dir/MACCS.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MACCS.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatalogUtils.cpp:14:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 40%] Linking CXX executable testPartialCharges
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges && /usr/bin/cmake -E cmake_link_script CMakeFiles/testPartialCharges.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testPartialCharges.dir/test1.cpp.o  -o testPartialCharges  ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 40%] Built target testPartialCharges
make -f Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build.make Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/DependInfo.cmake --color=
Scanning dependencies of target rdPartialCharges
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build.make Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 40%] Building CXX object Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/rdPartialCharges.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdPartialCharges_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdPartialCharges.dir/rdPartialCharges.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/Wrap/rdPartialCharges.cpp
[ 40%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/c++  -DFragCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FragCatalog.dir/FragCatGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatGenerator.cpp
[ 40%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FunctionalGroupHierarchy.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++  -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FilterCatalog.dir/FunctionalGroupHierarchy.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FunctionalGroupHierarchy.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.h:18,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/set:60,
                 from /usr/include/boost/graph/adjacency_list.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.h:18,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:11:
/usr/include/c++/9/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const double&>, std::tuple<>}; _Key = double; _Val = std::pair<const double, int>; _KeyOfValue = std::_Select1st<std::pair<const double, int> >; _Compare = RDKit::ltDouble; _Alloc = std::allocator<std::pair<const double, int> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/functional/hash.hpp:6,
                 from /usr/include/boost/unordered/unordered_set.hpp:18,
                 from /usr/include/boost/unordered_set.hpp:17,
                 from /usr/include/boost/graph/adjacency_list.hpp:21,
                 from /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.h:18,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:11:
/usr/include/c++/9/bits/stl_map.h: In function 'unsigned int RDKit::addOrder1Paths(RDKit::PATH_LIST&, const RDKit::ROMol&, RDKit::FragCatalog*, RDKit::DOUBLE_INT_MAP&, const MatchVectType&)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.h:18,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In function 'unsigned int RDKit::addHigherOrderPaths(const INT_PATH_LIST_MAP&, const RDKit::ROMol&, RDKit::FragCatalog*, RDKit::DOUBLE_INT_MAP&, const MatchVectType&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/functional/hash.hpp:6,
                 from /usr/include/boost/unordered/unordered_set.hpp:18,
                 from /usr/include/boost/unordered_set.hpp:17,
                 from /usr/include/boost/graph/adjacency_list.hpp:21,
                 from /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.h:18,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:11:
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 40%] Linking CXX shared module ../../../../rdkit/Chem/rdPartialCharges.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdPartialCharges.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdPartialCharges.so CMakeFiles/rdPartialCharges.dir/rdPartialCharges.cpp.o  ../../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 40%] Built target rdPartialCharges
make -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/DependInfo.cmake --color=
Scanning dependencies of target MolChemicalFeatures
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 40%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeature.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/c++  -DMolChemicalFeatures_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCHEMICALFEATURES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeature.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeature.cpp
[ 40%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/FingerprintGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Fingerprints.dir/FingerprintGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp
[ 40%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatalogEntry.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/c++  -DFragCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FragCatalog.dir/FragCatalogEntry.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatalogEntry.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.h:18,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalog.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FunctionalGroupHierarchy.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FunctionalGroupHierarchy.cpp:33:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In function 'void RDKit::{anonymous}::hierarchy_create()':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 40%] Linking CXX shared library ../../../lib/libRDKitFilterCatalog.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/FilterCatalog.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitFilterCatalog.so.1 -o ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 CMakeFiles/FilterCatalog.dir/Filters.cpp.o CMakeFiles/FilterCatalog.dir/FilterCatalog.cpp.o CMakeFiles/FilterCatalog.dir/FilterCatalogEntry.cpp.o CMakeFiles/FilterCatalog.dir/FilterCatalogRunner.cpp.o CMakeFiles/FilterCatalog.dir/FilterMatchers.cpp.o CMakeFiles/FilterCatalog.dir/FunctionalGroupHierarchy.cpp.o  ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 -lboost_serialization ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitFilterCatalog.so.1 ../../../lib/libRDKitFilterCatalog.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 40%] Built target FilterCatalog
[ 40%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatParams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/c++  -DFragCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FragCatalog.dir/FragCatParams.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatParams.cpp
[ 40%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureDef.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/c++  -DMolChemicalFeatures_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCHEMICALFEATURES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureDef.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.cpp
In file included from /usr/include/c++/9/map:60,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/SparseIntVect.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp:11:
/usr/include/c++/9/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, int>; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, int> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, int> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, int>, std::_Select1st<std::pair<const long long unsigned int, int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, int> >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatParams.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatalogEntry.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatalogEntry.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/SparseIntVect.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp:11:
/usr/include/c++/9/bits/stl_map.h: In member function 'RDKit::SparseIntVect<IndexType>* RDKit::FingerprintGenerator<OutputType>::getFingerprintHelper(const RDKit::ROMol&, const std::vector<unsigned int>*, const std::vector<unsigned int>*, int, const RDKit::AdditionalOutput*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, uint64_t) const [with OutputType = long long unsigned int]':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, int>, std::_Select1st<std::pair<const long long unsigned int, int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, int> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, int>, std::_Select1st<std::pair<const long long unsigned int, int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, int> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 40%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/AtomPairGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Fingerprints.dir/AtomPairGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp
[ 40%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/c++  -DMolChemicalFeatures_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCHEMICALFEATURES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureFactory.cpp
[ 40%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragFPGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/c++  -DFragCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FragCatalog.dir/FragFPGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragFPGenerator.cpp
[ 40%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/FeatureParser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/c++  -DMolChemicalFeatures_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCHEMICALFEATURES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolChemicalFeatures.dir/FeatureParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/FeatureParser.cpp
[ 40%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/MorganGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Fingerprints.dir/MorganGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 40%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/RDKitFPGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Fingerprints.dir/RDKitFPGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp
In file included from /usr/include/c++/9/set:60,
                 from /usr/include/boost/graph/adjacency_list.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.h:18,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragFPGenerator.cpp:11:
/usr/include/c++/9/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const double&>, std::tuple<>}; _Key = double; _Val = std::pair<const double, int>; _KeyOfValue = std::_Select1st<std::pair<const double, int> >; _Compare = RDKit::ltDouble; _Alloc = std::allocator<std::pair<const double, int> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/functional/hash.hpp:6,
                 from /usr/include/boost/unordered/unordered_set.hpp:18,
                 from /usr/include/boost/unordered_set.hpp:17,
                 from /usr/include/boost/graph/adjacency_list.hpp:21,
                 from /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.h:18,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragFPGenerator.cpp:11:
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDKit::FragFPGenerator::computeFP(const RDKit::ROMol&, const FragCatalog&, const MatchVectType&, ExplicitBitVect*)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/FeatureParser.h:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/FeatureParser.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  721 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
[ 40%] Linking CXX shared library ../../../lib/libRDKitFragCatalog.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/FragCatalog.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitFragCatalog.so.1 -o ../../../lib/libRDKitFragCatalog.so.1.2019.09.1 CMakeFiles/FragCatalog.dir/FragCatalogUtils.cpp.o CMakeFiles/FragCatalog.dir/FragCatGenerator.cpp.o CMakeFiles/FragCatalog.dir/FragCatalogEntry.cpp.o CMakeFiles/FragCatalog.dir/FragCatParams.cpp.o CMakeFiles/FragCatalog.dir/FragFPGenerator.cpp.o  ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitFragCatalog.so.1.2019.09.1 ../../../lib/libRDKitFragCatalog.so.1 ../../../lib/libRDKitFragCatalog.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 40%] Built target FragCatalog
make -f Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/DependInfo.cmake --color=
Scanning dependencies of target rdShapeHelpers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 40%] Building CXX object Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/rdShapeHelpers.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdShapeHelpers_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdShapeHelpers.dir/rdShapeHelpers.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/Wrap/rdShapeHelpers.cpp
/usr/include/c++/9/bits/vector.tcc: In function 'RDKit::MolChemicalFeatureDef* RDKit::Local::parseFeatureDef(std::istream&, const string&, unsigned int&, const std::map<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char> >&)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/FeatureParser.h:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/FeatureParser.cpp:11:
/usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
 1662 |    _M_range_insert(__pos, __first, __last,
      |    ^~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
[ 40%] Linking CXX shared library ../../../lib/libRDKitMolChemicalFeatures.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolChemicalFeatures.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitMolChemicalFeatures.so.1 -o ../../../lib/libRDKitMolChemicalFeatures.so.1.2019.09.1 CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeature.cpp.o CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureDef.cpp.o CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o CMakeFiles/MolChemicalFeatures.dir/FeatureParser.cpp.o  ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolChemicalFeatures.so.1.2019.09.1 ../../../lib/libRDKitMolChemicalFeatures.so.1 ../../../lib/libRDKitMolChemicalFeatures.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 40%] Built target MolChemicalFeatures
make -f Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/DependInfo.cmake --color=
Scanning dependencies of target ReducedGraphs
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 40%] Building CXX object Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/ReducedGraphs.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_REDUCEDGRAPHS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DReducedGraphs_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ReducedGraphs.dir/ReducedGraphs.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs/ReducedGraphs.cpp
make -f Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/build.make Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMolInterchange
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/build.make Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 40%] Building CXX object Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/rdMolInterchange.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolInterchange_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/rapidjson -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMolInterchange.dir/rdMolInterchange.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/Wrap/rdMolInterchange.cpp
[ 41%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/FingerprintUtil.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Fingerprints.dir/FingerprintUtil.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintUtil.cpp
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/Wrap/rdShapeHelpers.cpp:13:
/<<PKGBUILDDIR>>/Code/Geometry/point.h: In function 'boost::python::tuple RDKit::getUnionOfTwoBox(boost::python::tuple, boost::python::tuple)':
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:31: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                         ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:43: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::y' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                                     ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:55: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::z' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                                                 ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:31: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                         ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:43: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::y' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                                     ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:55: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::z' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                                                 ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:31: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                         ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:43: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::y' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                                     ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:55: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::z' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                                                 ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:31: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                         ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:43: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::y' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                                     ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:55: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::z' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                                                 ~~~~~~^
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs/ReducedGraphs.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 41%] Linking CXX shared module ../../../../rdkit/Chem/rdShapeHelpers.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdShapeHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdShapeHelpers.so CMakeFiles/rdShapeHelpers.dir/rdShapeHelpers.cpp.o  ../../../../lib/libRDKitShapeHelpers.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 41%] Built target rdShapeHelpers
make -f Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/DependInfo.cmake --color=
Scanning dependencies of target testSLNParse
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 41%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/test.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SLNPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testSLNParse.dir/test.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/test.cpp
[ 41%] Linking CXX shared library ../../../lib/libRDKitReducedGraphs.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs && /usr/bin/cmake -E cmake_link_script CMakeFiles/ReducedGraphs.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitReducedGraphs.so.1 -o ../../../lib/libRDKitReducedGraphs.so.1.2019.09.1 CMakeFiles/ReducedGraphs.dir/ReducedGraphs.cpp.o  ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitReducedGraphs.so.1.2019.09.1 ../../../lib/libRDKitReducedGraphs.so.1 ../../../lib/libRDKitReducedGraphs.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 41%] Built target ReducedGraphs
make -f Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/build.make Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/DependInfo.cmake --color=
Scanning dependencies of target rdSLNParse
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/build.make Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 41%] Building CXX object Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/rdSLNParse.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSLNParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdSLNParse.dir/rdSLNParse.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/Wrap/rdSLNParse.cpp
[ 41%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/TopologicalTorsionGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Fingerprints.dir/TopologicalTorsionGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp
[ 42%] Linking CXX shared module ../../../../rdkit/Chem/rdMolInterchange.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolInterchange.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdMolInterchange.so CMakeFiles/rdMolInterchange.dir/rdMolInterchange.cpp.o  ../../../../lib/libRDKitMolInterchange.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 42%] Built target rdMolInterchange
make -f Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/DependInfo.cmake --color=
Scanning dependencies of target rdchem
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 42%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/rdchem.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdchem.dir/rdchem.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/rdchem.cpp
[ 42%] Linking CXX shared library ../../../lib/libRDKitFingerprints.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_link_script CMakeFiles/Fingerprints.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitFingerprints.so.1 -o ../../../lib/libRDKitFingerprints.so.1.2019.09.1 CMakeFiles/Fingerprints.dir/Fingerprints.cpp.o CMakeFiles/Fingerprints.dir/PatternFingerprints.cpp.o CMakeFiles/Fingerprints.dir/MorganFingerprints.cpp.o CMakeFiles/Fingerprints.dir/AtomPairs.cpp.o CMakeFiles/Fingerprints.dir/MACCS.cpp.o CMakeFiles/Fingerprints.dir/FingerprintGenerator.cpp.o CMakeFiles/Fingerprints.dir/AtomPairGenerator.cpp.o CMakeFiles/Fingerprints.dir/MorganGenerator.cpp.o CMakeFiles/Fingerprints.dir/RDKitFPGenerator.cpp.o CMakeFiles/Fingerprints.dir/FingerprintUtil.cpp.o CMakeFiles/Fingerprints.dir/TopologicalTorsionGenerator.cpp.o  ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1 ../../../lib/libRDKitFingerprints.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 42%] Built target Fingerprints
make -f Code/ForceField/CMakeFiles/ForceField.dir/build.make Code/ForceField/CMakeFiles/ForceField.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ForceField /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/CMakeFiles/ForceField.dir/DependInfo.cmake --color=
Scanning dependencies of target ForceField
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ForceField/CMakeFiles/ForceField.dir/build.make Code/ForceField/CMakeFiles/ForceField.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 42%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/ForceField.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/ForceField.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/ForceField.cpp
[ 42%] Linking CXX shared module ../../../../rdkit/Chem/rdSLNParse.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdSLNParse.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdSLNParse.so CMakeFiles/rdSLNParse.dir/rdSLNParse.cpp.o  ../../../../lib/libRDKitSLNParse.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 42%] Built target rdSLNParse
make -f Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/Optimizer /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/DependInfo.cmake --color=
Scanning dependencies of target testOptimizer
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 43%] Building CXX object Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/testOptimizer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_OPTIMIZER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testOptimizer.dir/testOptimizer.cpp.o -c /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/testOptimizer.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/ForceField/ForceField.h:14,
                 from /<<PKGBUILDDIR>>/Code/ForceField/ForceField.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDKit::Snapshot&}; _Tp = RDKit::Snapshot; _Alloc = std::allocator<RDKit::Snapshot>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Snapshot>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/ForceField/ForceField.h:14,
                 from /<<PKGBUILDDIR>>/Code/ForceField/ForceField.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In member function 'double ForceFields::ForceField::calcEnergy(std::vector<double>*) const':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function 'int BFGSOpt::minimize(unsigned int, double*, double, unsigned int&, double&, EnergyFunctor, GradientFunctor, unsigned int, RDKit::SnapshotVect*, double, unsigned int) [with EnergyFunctor = ForceFieldsHelper::calcEnergy; GradientFunctor = ForceFieldsHelper::calcGradient]':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 43%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/AngleBend.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/UFF/AngleBend.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/AngleBend.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Snapshot.h:14,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/BFGSOpt.h:13,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/testOptimizer.cpp:16:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDKit::Snapshot&}; _Tp = RDKit::Snapshot; _Alloc = std::allocator<RDKit::Snapshot>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Snapshot>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Snapshot.h:14,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/BFGSOpt.h:13,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/testOptimizer.cpp:16:
/usr/include/c++/9/bits/stl_vector.h: In function 'int BFGSOpt::minimize(unsigned int, double*, double, unsigned int&, double&, EnergyFunctor, GradientFunctor, unsigned int, RDKit::SnapshotVect*, double, unsigned int) [with EnergyFunctor = double (*)(double*); GradientFunctor = double (*)(double*, double*)]':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 43%] Linking CXX executable testOptimizer
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer && /usr/bin/cmake -E cmake_link_script CMakeFiles/testOptimizer.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testOptimizer.dir/testOptimizer.cpp.o  -o testOptimizer  ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 43%] Built target testOptimizer
[ 43%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/BondStretch.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/UFF/BondStretch.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/BondStretch.cpp
make -f Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build.make Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/DependInfo.cmake --color=
Scanning dependencies of target rdFingerprintGenerator
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build.make Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 43%] Building CXX object Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/FingerprintGeneratorWrapper.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdFingerprintGenerator_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdFingerprintGenerator.dir/FingerprintGeneratorWrapper.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Wrap/FingerprintGeneratorWrapper.cpp
[ 43%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/Nonbonded.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/UFF/Nonbonded.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/Nonbonded.cpp
[ 43%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Table.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdchem.dir/Table.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Table.cpp
[ 44%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/Inversion.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/UFF/Inversion.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/Inversion.cpp
[ 44%] Linking CXX executable testSLNParse
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSLNParse.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testSLNParse.dir/test.cpp.o  -o testSLNParse  ../../../lib/libRDKitSLNParse.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 44%] Built target testSLNParse
[ 44%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/TorsionAngle.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/UFF/TorsionAngle.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/TorsionAngle.cpp
[ 44%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/DistanceConstraint.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/UFF/DistanceConstraint.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/DistanceConstraint.cpp
[ 44%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/AngleConstraint.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/UFF/AngleConstraint.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/AngleConstraint.cpp
[ 44%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/TorsionConstraint.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/UFF/TorsionConstraint.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/TorsionConstraint.cpp
[ 44%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/PositionConstraint.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/UFF/PositionConstraint.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/PositionConstraint.cpp
[ 44%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Atom.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdchem.dir/Atom.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Atom.cpp
make -f Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMolChemicalFeatures
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 44%] Building CXX object Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/rdMolChemicalFeatures.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolChemicalFeatures_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMolChemicalFeatures.dir/rdMolChemicalFeatures.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/Wrap/rdMolChemicalFeatures.cpp
[ 45%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/Params.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/UFF/Params.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/Params.cpp
[ 45%] Linking CXX shared module ../../../../rdkit/Chem/rdFingerprintGenerator.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdFingerprintGenerator.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdFingerprintGenerator.so CMakeFiles/rdFingerprintGenerator.dir/FingerprintGeneratorWrapper.cpp.o  ../../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 45%] Built target rdFingerprintGenerator
[ 45%] Building CXX object Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeature.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolChemicalFeatures_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeature.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/Wrap/MolChemicalFeature.cpp
[ 45%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/AngleBend.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/MMFF/AngleBend.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/AngleBend.cpp
make -f Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/DependInfo.cmake --color=
Scanning dependencies of target testReducedGraphs
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 45%] Building CXX object Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_REDUCEDGRAPHS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testReducedGraphs.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs/test1.cpp
[ 45%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/BondStretch.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/MMFF/BondStretch.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/BondStretch.cpp
[ 45%] Building CXX object Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolChemicalFeatures_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/Wrap/MolChemicalFeatureFactory.cpp
[ 45%] Linking CXX executable testReducedGraphs
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs && /usr/bin/cmake -E cmake_link_script CMakeFiles/testReducedGraphs.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testReducedGraphs.dir/test1.cpp.o  -o testReducedGraphs  ../../../lib/libRDKitReducedGraphs.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
[ 45%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/StretchBend.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/MMFF/StretchBend.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/StretchBend.cpp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 45%] Built target testReducedGraphs
[ 45%] Building CXX object Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/ChemicalFeatureUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolChemicalFeatures_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMolChemicalFeatures.dir/ChemicalFeatureUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/Wrap/ChemicalFeatureUtils.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Atom.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 45%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/OopBend.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/MMFF/OopBend.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/OopBend.cpp
make -f Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/DependInfo.cmake --color=
Scanning dependencies of target rdReducedGraphs
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 45%] Building CXX object Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/rdReducedGraphs.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdReducedGraphs_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdReducedGraphs.dir/rdReducedGraphs.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs/Wrap/rdReducedGraphs.cpp
[ 45%] Linking CXX shared module ../../../../rdkit/Chem/rdMolChemicalFeatures.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolChemicalFeatures.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdMolChemicalFeatures.so CMakeFiles/rdMolChemicalFeatures.dir/rdMolChemicalFeatures.cpp.o CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeature.cpp.o CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o CMakeFiles/rdMolChemicalFeatures.dir/ChemicalFeatureUtils.cpp.o  ../../../../lib/libRDKitMolChemicalFeatures.so.1.2019.09.1 ../../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 45%] Built target rdMolChemicalFeatures
[ 45%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/TorsionAngle.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/MMFF/TorsionAngle.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/TorsionAngle.cpp
[ 45%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/Nonbonded.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/MMFF/Nonbonded.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Nonbonded.cpp
[ 46%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Bond.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdchem.dir/Bond.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Bond.cpp
[ 47%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/DistanceConstraint.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/MMFF/DistanceConstraint.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/DistanceConstraint.cpp
[ 47%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Mol.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdchem.dir/Mol.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Mol.cpp
[ 47%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/AngleConstraint.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/MMFF/AngleConstraint.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/AngleConstraint.cpp
[ 47%] Linking CXX shared module ../../../../rdkit/Chem/rdReducedGraphs.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdReducedGraphs.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdReducedGraphs.so CMakeFiles/rdReducedGraphs.dir/rdReducedGraphs.cpp.o  ../../../../lib/libRDKitReducedGraphs.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 47%] Built target rdReducedGraphs
[ 47%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/TorsionConstraint.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/MMFF/TorsionConstraint.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/TorsionConstraint.cpp
[ 47%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/PositionConstraint.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/MMFF/PositionConstraint.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/PositionConstraint.cpp
[ 47%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/Params.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/MMFF/Params.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Params.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Bond.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
make -f Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/DependInfo.cmake --color=
Scanning dependencies of target SubstructLibrary
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 47%] Building CXX object Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/SubstructLibrary.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBSTRUCTLIBRARY_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubstructLibrary_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SubstructLibrary.dir/SubstructLibrary.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/SubstructLibrary.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Params.h:20,
                 from /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Params.cpp:17:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFPBCI&}; _Tp = ForceFields::MMFF::MMFFPBCI; _Alloc = std::allocator<ForceFields::MMFF::MMFFPBCI>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFPBCI>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFPBCI*, std::vector<ForceFields::MMFF::MMFFPBCI> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFChg&}; _Tp = ForceFields::MMFF::MMFFChg; _Alloc = std::allocator<ForceFields::MMFF::MMFFChg>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFChg>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFChg*, std::vector<ForceFields::MMFF::MMFFChg> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFBond&}; _Tp = ForceFields::MMFF::MMFFBond; _Alloc = std::allocator<ForceFields::MMFF::MMFFBond>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFBond>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFBond*, std::vector<ForceFields::MMFF::MMFFBond> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFHerschbachLaurie&}; _Tp = ForceFields::MMFF::MMFFHerschbachLaurie; _Alloc = std::allocator<ForceFields::MMFF::MMFFHerschbachLaurie>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFHerschbachLaurie>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFHerschbachLaurie*, std::vector<ForceFields::MMFF::MMFFHerschbachLaurie> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFCovRadPauEle&}; _Tp = ForceFields::MMFF::MMFFCovRadPauEle; _Alloc = std::allocator<ForceFields::MMFF::MMFFCovRadPauEle>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFCovRadPauEle>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFCovRadPauEle*, std::vector<ForceFields::MMFF::MMFFCovRadPauEle> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFAngle&}; _Tp = ForceFields::MMFF::MMFFAngle; _Alloc = std::allocator<ForceFields::MMFF::MMFFAngle>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFAngle>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFAngle*, std::vector<ForceFields::MMFF::MMFFAngle> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFStbn&}; _Tp = ForceFields::MMFF::MMFFStbn; _Alloc = std::allocator<ForceFields::MMFF::MMFFStbn>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFStbn>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFStbn*, std::vector<ForceFields::MMFF::MMFFStbn> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFOop&}; _Tp = ForceFields::MMFF::MMFFOop; _Alloc = std::allocator<ForceFields::MMFF::MMFFOop>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFOop>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFOop*, std::vector<ForceFields::MMFF::MMFFOop> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFTor&}; _Tp = ForceFields::MMFF::MMFFTor; _Alloc = std::allocator<ForceFields::MMFF::MMFFTor>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFTor>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFTor*, std::vector<ForceFields::MMFF::MMFFTor> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFVdW&}; _Tp = ForceFields::MMFF::MMFFVdW; _Alloc = std::allocator<ForceFields::MMFF::MMFFVdW>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFVdW>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFVdW*, std::vector<ForceFields::MMFF::MMFFVdW> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Params.h:20,
                 from /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Params.cpp:17:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFPBCICollection::MMFFPBCICollection(std::string)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFPBCI*, std::vector<ForceFields::MMFF::MMFFPBCI> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFChgCollection::MMFFChgCollection(std::string)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFChg*, std::vector<ForceFields::MMFF::MMFFChg> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFBondCollection::MMFFBondCollection(std::string)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFBond*, std::vector<ForceFields::MMFF::MMFFBond> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFBndkCollection::MMFFBndkCollection(std::string)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFBond*, std::vector<ForceFields::MMFF::MMFFBond> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFHerschbachLaurieCollection::MMFFHerschbachLaurieCollection(std::string)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFHerschbachLaurie*, std::vector<ForceFields::MMFF::MMFFHerschbachLaurie> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFCovRadPauEleCollection::MMFFCovRadPauEleCollection(std::string)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFCovRadPauEle*, std::vector<ForceFields::MMFF::MMFFCovRadPauEle> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFAngleCollection::MMFFAngleCollection(std::string)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFAngle*, std::vector<ForceFields::MMFF::MMFFAngle> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 47%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Conformer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdchem.dir/Conformer.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Conformer.cpp
/usr/include/c++/9/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFStbnCollection::MMFFStbnCollection(std::string)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFStbn*, std::vector<ForceFields::MMFF::MMFFStbn> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFOopCollection::MMFFOopCollection(bool, std::string)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFOop*, std::vector<ForceFields::MMFF::MMFFOop> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFTorCollection::MMFFTorCollection(bool, std::string)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFTor*, std::vector<ForceFields::MMFF::MMFFTor> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFVdWCollection::MMFFVdWCollection(std::string)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFVdW*, std::vector<ForceFields::MMFF::MMFFVdW> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 47%] Linking CXX shared library ../../lib/libRDKitForceField.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/cmake -E cmake_link_script CMakeFiles/ForceField.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitForceField.so.1 -o ../../lib/libRDKitForceField.so.1.2019.09.1 CMakeFiles/ForceField.dir/ForceField.cpp.o CMakeFiles/ForceField.dir/UFF/AngleBend.cpp.o CMakeFiles/ForceField.dir/UFF/BondStretch.cpp.o CMakeFiles/ForceField.dir/UFF/Nonbonded.cpp.o CMakeFiles/ForceField.dir/UFF/Inversion.cpp.o CMakeFiles/ForceField.dir/UFF/TorsionAngle.cpp.o CMakeFiles/ForceField.dir/UFF/DistanceConstraint.cpp.o CMakeFiles/ForceField.dir/UFF/AngleConstraint.cpp.o CMakeFiles/ForceField.dir/UFF/TorsionConstraint.cpp.o CMakeFiles/ForceField.dir/UFF/PositionConstraint.cpp.o CMakeFiles/ForceField.dir/UFF/Params.cpp.o CMakeFiles/ForceField.dir/MMFF/AngleBend.cpp.o CMakeFiles/ForceField.dir/MMFF/BondStretch.cpp.o CMakeFiles/ForceField.dir/MMFF/StretchBend.cpp.o CMakeFiles/ForceField.dir/MMFF/OopBend.cpp.o CMakeFiles/ForceField.dir/MMFF/TorsionAngle.cpp.o CMakeFiles/ForceField.dir/MMFF/Nonbonded.cpp.o CMakeFiles/ForceField.dir/MMFF/DistanceConstraint.cpp.o CMakeFiles/ForceField.dir/MMFF/AngleConstraint.cpp.o CMakeFiles/ForceField.dir/MMFF/TorsionConstraint.cpp.o CMakeFiles/ForceField.dir/MMFF/PositionConstraint.cpp.o CMakeFiles/ForceField.dir/MMFF/Params.cpp.o  ../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitForceField.so.1.2019.09.1 ../../lib/libRDKitForceField.so.1 ../../lib/libRDKitForceField.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 47%] Built target ForceField
make -f Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/DependInfo.cmake --color=
Scanning dependencies of target ForceFieldHelpers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 48%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/UFF/AtomTyper.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/c++  -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceFieldHelpers.dir/UFF/AtomTyper.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/AtomTyper.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Mol.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 48%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/UFF/Builder.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/c++  -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceFieldHelpers.dir/UFF/Builder.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/Builder.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Conformer.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Conformer.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In member function 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 48%] Linking CXX shared library ../../../lib/libRDKitSubstructLibrary.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary && /usr/bin/cmake -E cmake_link_script CMakeFiles/SubstructLibrary.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitSubstructLibrary.so.1 -o ../../../lib/libRDKitSubstructLibrary.so.1.2019.09.1 CMakeFiles/SubstructLibrary.dir/SubstructLibrary.cpp.o  ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 -lboost_serialization ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Conformer.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitSubstructLibrary.so.1.2019.09.1 ../../../lib/libRDKitSubstructLibrary.so.1 ../../../lib/libRDKitSubstructLibrary.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 48%] Built target SubstructLibrary
[ 48%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/MMFF/AtomTyper.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/c++  -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceFieldHelpers.dir/MMFF/AtomTyper.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/AtomTyper.cpp
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Conformer.cpp:21:
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h: In member function 'T PySequenceHolder<T>::operator[](unsigned int) const [with T = double]':
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
   68 |       T res = python::extract<T>(d_seq[which]);
      |         ^~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Conformer.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In function 'void RDKit::SetAtomPos(RDKit::Conformer*, unsigned int, boost::python::api::object)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 48%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/MMFF/Builder.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/c++  -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceFieldHelpers.dir/MMFF/Builder.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/Builder.cpp
[ 48%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/RingInfo.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdchem.dir/RingInfo.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/RingInfo.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/AtomTyper.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 48%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionAngleM6.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/c++  -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionAngleM6.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionAngleM6.cpp
[ 48%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/EditableMol.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdchem.dir/EditableMol.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/EditableMol.cpp
[ 48%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/MonomerInfo.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdchem.dir/MonomerInfo.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MonomerInfo.cpp
[ 48%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionPreferences.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/c++  -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionPreferences.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.cpp
[ 49%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/ResonanceMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdchem.dir/ResonanceMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/ResonanceMolSupplier.cpp
[ 49%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/MolBundle.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdchem.dir/MolBundle.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MolBundle.cpp
[ 49%] Linking CXX shared library ../../../lib/libRDKitForceFieldHelpers.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/ForceFieldHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitForceFieldHelpers.so.1 -o ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 CMakeFiles/ForceFieldHelpers.dir/UFF/AtomTyper.cpp.o CMakeFiles/ForceFieldHelpers.dir/UFF/Builder.cpp.o CMakeFiles/ForceFieldHelpers.dir/MMFF/AtomTyper.cpp.o CMakeFiles/ForceFieldHelpers.dir/MMFF/Builder.cpp.o CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionAngleM6.cpp.o CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionPreferences.cpp.o  ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1 ../../../lib/libRDKitForceFieldHelpers.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 49%] Built target ForceFieldHelpers
make -f Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/DependInfo.cmake --color=
Scanning dependencies of target MolAlign
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 49%] Building CXX object Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/AlignMolecules.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/c++  -DMolAlign_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLALIGN_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolAlign.dir/AlignMolecules.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/AlignMolecules.cpp
[ 49%] Building CXX object Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/O3AAlignMolecules.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/c++  -DMolAlign_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLALIGN_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolAlign.dir/O3AAlignMolecules.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/O3AAlignMolecules.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:15,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Matrix.h:15,
                 from /<<PKGBUILDDIR>>/Code/Numerics/SquareMatrix.h:14,
                 from /<<PKGBUILDDIR>>/Code/Geometry/Transform3D.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/AlignMolecules.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/AlignMolecules.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 49%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/StereoGroup.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdchem.dir/StereoGroup.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/StereoGroup.cpp
[ 49%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/SubstanceGroup.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdchem.dir/SubstanceGroup.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SubstanceGroup.cpp
/<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SubstanceGroup.cpp: In function 'void RDKit::{anonymous}::addBracketHelper(RDKit::SubstanceGroup&, boost::python::api::object)':
/<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SubstanceGroup.cpp:55:16: warning: unused variable 'i' [-Wunused-variable]
   55 |   unsigned int i = 0;
      |                ^
make -f Code/DistGeom/CMakeFiles/DistGeometry.dir/build.make Code/DistGeom/CMakeFiles/DistGeometry.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DistGeom /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/CMakeFiles/DistGeometry.dir/DependInfo.cmake --color=
Scanning dependencies of target DistGeometry
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/DistGeom/CMakeFiles/DistGeometry.dir/build.make Code/DistGeom/CMakeFiles/DistGeometry.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 49%] Building CXX object Code/DistGeom/CMakeFiles/DistGeometry.dir/DistGeomUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/c++  -DDistGeometry_EXPORTS -DRDKIT_DISTGEOMETRY_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/DistGeometry.dir/DistGeomUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/DistGeom/DistGeomUtils.cpp
[ 49%] Building CXX object Code/DistGeom/CMakeFiles/DistGeometry.dir/TriangleSmooth.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/c++  -DDistGeometry_EXPORTS -DRDKIT_DISTGEOMETRY_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/DistGeometry.dir/TriangleSmooth.cpp.o -c /<<PKGBUILDDIR>>/Code/DistGeom/TriangleSmooth.cpp
[ 49%] Linking CXX shared library ../../../lib/libRDKitMolAlign.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolAlign.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitMolAlign.so.1 -o ../../../lib/libRDKitMolAlign.so.1.2019.09.1 CMakeFiles/MolAlign.dir/AlignMolecules.cpp.o CMakeFiles/MolAlign.dir/O3AAlignMolecules.cpp.o  ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1 ../../../lib/libRDKitMolAlign.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 49%] Built target MolAlign
[ 49%] Building CXX object Code/DistGeom/CMakeFiles/DistGeometry.dir/DistViolationContrib.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/c++  -DDistGeometry_EXPORTS -DRDKIT_DISTGEOMETRY_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/DistGeometry.dir/DistViolationContrib.cpp.o -c /<<PKGBUILDDIR>>/Code/DistGeom/DistViolationContrib.cpp
[ 50%] Building CXX object Code/DistGeom/CMakeFiles/DistGeometry.dir/ChiralViolationContrib.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/c++  -DDistGeometry_EXPORTS -DRDKIT_DISTGEOMETRY_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/DistGeometry.dir/ChiralViolationContrib.cpp.o -c /<<PKGBUILDDIR>>/Code/DistGeom/ChiralViolationContrib.cpp
make -f Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build.make Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ForceField/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/DependInfo.cmake --color=
Scanning dependencies of target rdForceField
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build.make Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 51%] Building CXX object Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/ForceField.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdForceField_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdForceField.dir/ForceField.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/Wrap/ForceField.cpp
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SubstanceGroup.cpp:17:
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:31: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                         ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:43: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::y' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                                     ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:55: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::z' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                                                 ~~~~~~^
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SubstanceGroup.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
make -f Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/DependInfo.cmake --color=
Scanning dependencies of target rdForceFieldHelpers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 51%] Building CXX object Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/rdForceFields.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdForceFieldHelpers_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdForceFieldHelpers.dir/rdForceFields.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/Wrap/rdForceFields.cpp
[ 51%] Linking CXX shared library ../../lib/libRDKitDistGeometry.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/cmake -E cmake_link_script CMakeFiles/DistGeometry.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitDistGeometry.so.1 -o ../../lib/libRDKitDistGeometry.so.1.2019.09.1 CMakeFiles/DistGeometry.dir/DistGeomUtils.cpp.o CMakeFiles/DistGeometry.dir/TriangleSmooth.cpp.o CMakeFiles/DistGeometry.dir/DistViolationContrib.cpp.o CMakeFiles/DistGeometry.dir/ChiralViolationContrib.cpp.o  ../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../lib/libRDKitForceField.so.1.2019.09.1 ../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitDistGeometry.so.1.2019.09.1 ../../lib/libRDKitDistGeometry.so.1 ../../lib/libRDKitDistGeometry.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 51%] Built target DistGeometry
make -f Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Depictor /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/DependInfo.cmake --color=
Scanning dependencies of target Depictor
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 51%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/RDDepictor.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/c++  -DDepictor_EXPORTS -DIN_COORDGEN -DRDKIT_DEPICTOR_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Depictor.dir/RDDepictor.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.cpp
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.cpp:12:
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h: In member function 'RDDepict::EmbeddedAtom RDDepict::EmbeddedFrag::GetEmbeddedAtom(unsigned int) const':
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h:314:18: warning: implicitly-declared 'RDDepict::EmbeddedAtom::EmbeddedAtom(const RDDepict::EmbeddedAtom&)' is deprecated [-Wdeprecated-copy]
  314 |     return posi->second;
      |                  ^~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h:59:17: note: because 'RDDepict::EmbeddedAtom' has user-provided 'RDDepict::EmbeddedAtom& RDDepict::EmbeddedAtom::operator=(const RDDepict::EmbeddedAtom&)'
   59 |   EmbeddedAtom &operator=(const EmbeddedAtom &other) {
      |                 ^~~~~~~~
[ 51%] Linking CXX shared module ../../../rdkit/Chem/rdchem.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdchem.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/Chem/rdchem.so CMakeFiles/rdchem.dir/rdchem.cpp.o CMakeFiles/rdchem.dir/Table.cpp.o CMakeFiles/rdchem.dir/Atom.cpp.o CMakeFiles/rdchem.dir/Bond.cpp.o CMakeFiles/rdchem.dir/Mol.cpp.o CMakeFiles/rdchem.dir/Conformer.cpp.o CMakeFiles/rdchem.dir/RingInfo.cpp.o CMakeFiles/rdchem.dir/EditableMol.cpp.o CMakeFiles/rdchem.dir/MonomerInfo.cpp.o CMakeFiles/rdchem.dir/ResonanceMolSupplier.cpp.o CMakeFiles/rdchem.dir/MolBundle.cpp.o CMakeFiles/rdchem.dir/StereoGroup.cpp.o CMakeFiles/rdchem.dir/SubstanceGroup.cpp.o  ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function 'unsigned int RDDepict::copyCoordinate(RDKit::ROMol&, std::__cxx11::list<RDDepict::EmbeddedFrag>&, bool)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function 'unsigned int RDKit::CoordGen::addCoords(T&, const RDKit::CoordGen::CoordGenParams*) [with T = RDKit::ROMol]':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 51%] Built target rdchem
make -f External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/build.make External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/External/CoordGen/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/DependInfo.cmake --color=
/usr/include/c++/9/bits/stl_vector.h: In function 'unsigned int RDDepict::compute2DCoords(RDKit::ROMol&, const INT_POINT2D_MAP*, bool, bool, unsigned int, unsigned int, int, bool, bool)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
Scanning dependencies of target rdCoordGen
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/build.make External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 51%] Building CXX object External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/rdCoordGen.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/Wrap && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DIN_COORDGEN -DIN_MAEPARSER -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdCoordGen_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdCoordGen.dir/rdCoordGen.cpp.o -c /<<PKGBUILDDIR>>/External/CoordGen/Wrap/rdCoordGen.cpp
[ 51%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/EmbeddedFrag.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/c++  -DDepictor_EXPORTS -DIN_COORDGEN -DRDKIT_DEPICTOR_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Depictor.dir/EmbeddedFrag.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp
/<<PKGBUILDDIR>>/Code/ForceField/Wrap/ForceField.cpp: In member function 'double ForceFields::PyForceField::calcEnergyWithPos(const boost::python::api::object&)':
/<<PKGBUILDDIR>>/Code/ForceField/Wrap/ForceField.cpp:135:12: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  135 |       c[i] = python::extract<double>(pos[i]);
/<<PKGBUILDDIR>>/Code/ForceField/Wrap/ForceField.cpp: In member function 'PyObject* ForceFields::PyForceField::calcGradWithPos(const boost::python::api::object&)':
/<<PKGBUILDDIR>>/Code/ForceField/Wrap/ForceField.cpp:169:12: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  169 |       c[i] = python::extract<double>(pos[i]);
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:17:
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h: In member function 'RDDepict::EmbeddedAtom RDDepict::EmbeddedFrag::GetEmbeddedAtom(unsigned int) const':
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h:314:18: warning: implicitly-declared 'RDDepict::EmbeddedAtom::EmbeddedAtom(const RDDepict::EmbeddedAtom&)' is deprecated [-Wdeprecated-copy]
  314 |     return posi->second;
      |                  ^~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h:59:17: note: because 'RDDepict::EmbeddedAtom' has user-provided 'RDDepict::EmbeddedAtom& RDDepict::EmbeddedAtom::operator=(const RDDepict::EmbeddedAtom&)'
   59 |   EmbeddedAtom &operator=(const EmbeddedAtom &other) {
      |                 ^~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp: In member function 'void RDDepict::EmbeddedFrag::addAtomToAtomWithAng(unsigned int, unsigned int)':
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:710:40: warning: implicitly-declared 'RDDepict::EmbeddedAtom::EmbeddedAtom(const RDDepict::EmbeddedAtom&)' is deprecated [-Wdeprecated-copy]
  710 |   EmbeddedAtom refAtom = d_eatoms[toAid];
      |                                        ^
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:17:
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h:59:17: note: because 'RDDepict::EmbeddedAtom' has user-provided 'RDDepict::EmbeddedAtom& RDDepict::EmbeddedAtom::operator=(const RDDepict::EmbeddedAtom&)'
   59 |   EmbeddedAtom &operator=(const EmbeddedAtom &other) {
      |                 ^~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp: In member function 'void RDDepict::EmbeddedFrag::addAtomToAtomWithNoAng(unsigned int, unsigned int)':
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:781:40: warning: implicitly-declared 'RDDepict::EmbeddedAtom::EmbeddedAtom(const RDDepict::EmbeddedAtom&)' is deprecated [-Wdeprecated-copy]
  781 |   EmbeddedAtom refAtom = d_eatoms[toAid];
      |                                        ^
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:17:
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h:59:17: note: because 'RDDepict::EmbeddedAtom' has user-provided 'RDDepict::EmbeddedAtom& RDDepict::EmbeddedAtom::operator=(const RDDepict::EmbeddedAtom&)'
   59 |   EmbeddedAtom &operator=(const EmbeddedAtom &other) {
      |                 ^~~~~~~~
[ 51%] Linking CXX shared module ../../../../rdkit/Chem/rdForceFieldHelpers.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdForceFieldHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdForceFieldHelpers.so CMakeFiles/rdForceFieldHelpers.dir/rdForceFields.cpp.o  ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 51%] Built target rdForceFieldHelpers
make -f Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/DependInfo.cmake --color=
Scanning dependencies of target DistGeomHelpers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 52%] Building CXX object Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/BoundsMatrixBuilder.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/c++  -DDistGeomHelpers_EXPORTS -DRDKIT_DISTGEOMHELPERS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/DistGeomHelpers.dir/BoundsMatrixBuilder.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.cpp
In file included from /usr/include/c++/9/map:60,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:10:
/usr/include/c++/9/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = unsigned int; _Val = std::pair<const unsigned int, RDDepict::EmbeddedAtom>; _KeyOfValue = std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]':
/usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
 2187 |     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const unsigned int&>, std::tuple<>}; _Key = unsigned int; _Val = std::pair<const unsigned int, RDDepict::EmbeddedAtom>; _KeyOfValue = std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:10:
/usr/include/c++/9/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::reflectIfNecessaryThirdPt(RDDepict::EmbeddedFrag&, unsigned int, unsigned int, unsigned int)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::reflectIfNecessaryDensity(RDDepict::EmbeddedFrag&, unsigned int, unsigned int)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'RDGeom::Transform2D RDDepict::EmbeddedFrag::computeTwoAtomTrans(unsigned int, unsigned int, const INT_POINT2D_MAP&)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'std::vector<std::pair<int, int> > RDDepict::EmbeddedFrag::findCollisions(const double*, bool)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::openAngles(const double*, unsigned int, unsigned int)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::updateNewNeighs(unsigned int)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In constructor 'RDDepict::EmbeddedFrag::EmbeddedFrag(unsigned int, const RDKit::ROMol*)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::addAtomToAtomWithNoAng(unsigned int, unsigned int)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/9/map:60,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:10:
/usr/include/c++/9/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<unsigned int&&>, std::tuple<>}; _Key = unsigned int; _Val = std::pair<const unsigned int, RDDepict::EmbeddedAtom>; _KeyOfValue = std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:10:
/usr/include/c++/9/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](std::map<_Key, _Tp, _Compare, _Alloc>::key_type&&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::permuteBonds(unsigned int, unsigned int, unsigned int)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::initFromRingCoords(const INT_VECT&, const INT_POINT2D_MAP&)':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'RDGeom::Transform2D RDDepict::EmbeddedFrag::computeOneAtomTrans(unsigned int, const RDDepict::EmbeddedFrag&)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/External/CoordGen/Wrap/rdCoordGen.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/External/CoordGen/Wrap/rdCoordGen.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::addAtomToAtomWithAng(unsigned int, unsigned int)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::addNonRingAtom(unsigned int, unsigned int)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::reflectIfNecessaryCisTrans(RDDepict::EmbeddedFrag&, unsigned int, unsigned int, unsigned int)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_vector.h: In function 'unsigned int RDKit::CoordGen::addCoords(T&, const RDKit::CoordGen::CoordGenParams*) [with T = RDKit::ROMol]':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::computeNbrsAndAng(unsigned int, const INT_VECT&)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:25,
                 from /<<PKGBUILDDIR>>/External/CoordGen/Wrap/rdCoordGen.cpp:17:
/<<PKGBUILDDIR>>/Code/Geometry/point.h: In function 'void RDKit::{anonymous}::SetCoordMap(RDKit::CoordGen::CoordGenParams*, boost::python::dict&)':
/<<PKGBUILDDIR>>/Code/Geometry/point.h:293:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point2D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
  293 |     x = other.x;
      |         ~~~~~~^
/usr/include/c++/9/bits/stl_map.h: In constructor 'RDDepict::EmbeddedFrag::EmbeddedFrag(const RDKit::ROMol*, const INT_POINT2D_MAP&)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::mergeWithCommon(RDDepict::EmbeddedFrag&, RDKit::INT_VECT&)':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::mergeFragsWithComm(std::__cxx11::list<RDDepict::EmbeddedFrag>&)':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::expandEfrag(RDKit::INT_LIST&, std::__cxx11::list<RDDepict::EmbeddedFrag>&)':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::flipAboutBond(unsigned int, bool)':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::mergeRing(const RDDepict::EmbeddedFrag&, unsigned int, const INT_VECT&)':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::removeCollisionsShortenBonds()':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 52%] Linking CXX shared module ../../../rdkit/Chem/rdCoordGen.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdCoordGen.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/Chem/rdCoordGen.so CMakeFiles/rdCoordGen.dir/rdCoordGen.cpp.o  -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lpython3.8 -lboost_python3 -lboost_serialization 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 52%] Built target rdCoordGen
make -f Code/DistGeom/CMakeFiles/testDistGeom.dir/build.make Code/DistGeom/CMakeFiles/testDistGeom.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DistGeom /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/CMakeFiles/testDistGeom.dir/DependInfo.cmake --color=
Scanning dependencies of target testDistGeom
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/DistGeom/CMakeFiles/testDistGeom.dir/build.make Code/DistGeom/CMakeFiles/testDistGeom.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 52%] Building CXX object Code/DistGeom/CMakeFiles/testDistGeom.dir/testDistGeom.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/c++  -DRDKIT_DISTGEOMETRY_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testDistGeom.dir/testDistGeom.cpp.o -c /<<PKGBUILDDIR>>/Code/DistGeom/testDistGeom.cpp
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::randomSampleFlipsAndPermutations(unsigned int, unsigned int, int, const DOUBLE_SMART_PTR*, double, bool)':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 52%] Linking CXX shared module ../../../rdkit/ForceField/rdForceField.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdForceField.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/ForceField/rdForceField.so CMakeFiles/rdForceField.dir/ForceField.cpp.o  ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 52%] Built target rdForceField
make -f Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build.make Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DistGeom/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/DependInfo.cmake --color=
Scanning dependencies of target DistGeom
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build.make Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 52%] Building CXX object Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/DistGeom.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap && /usr/bin/c++  -DDistGeom_EXPORTS -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/DistGeom.dir/DistGeom.cpp.o -c /<<PKGBUILDDIR>>/Code/DistGeom/Wrap/DistGeom.cpp
[ 52%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/DepictUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/c++  -DDepictor_EXPORTS -DIN_COORDGEN -DRDKIT_DEPICTOR_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Depictor.dir/DepictUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/DepictUtils.cpp
[ 52%] Building CXX object Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/Embedder.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/c++  -DDistGeomHelpers_EXPORTS -DRDKIT_DISTGEOMHELPERS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/DistGeomHelpers.dir/Embedder.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Embedder.cpp
[ 52%] Linking CXX executable testDistGeom
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDistGeom.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testDistGeom.dir/testDistGeom.cpp.o  -o testDistGeom  ../../lib/libRDKitDistGeometry.so.1.2019.09.1 ../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../lib/libRDKitForceField.so.1.2019.09.1 ../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 52%] Built target testDistGeom
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/DepictUtils.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDGeom::Point2D&}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point2D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/DepictUtils.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In function 'RDDepict::INT_PAIR_VECT RDDepict::findBondsPairsToPermuteDeg4(const RDGeom::Point2D&, const INT_VECT&, const VECT_C_POINT&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 52%] Linking CXX shared module ../../../rdkit/DistanceGeometry/DistGeom.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/DistGeom.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/DistanceGeometry/DistGeom.so CMakeFiles/DistGeom.dir/DistGeom.cpp.o  ../../../lib/libRDKitDistGeometry.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 52%] Built target DistGeom
[ 52%] Linking CXX shared library ../../../lib/libRDKitDepictor.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/cmake -E cmake_link_script CMakeFiles/Depictor.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitDepictor.so.1 -o ../../../lib/libRDKitDepictor.so.1.2019.09.1 CMakeFiles/Depictor.dir/RDDepictor.cpp.o CMakeFiles/Depictor.dir/EmbeddedFrag.cpp.o CMakeFiles/Depictor.dir/DepictUtils.cpp.o  ../../../lib/libRDKitMolAlign.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1 ../../../lib/libRDKitDepictor.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 52%] Built target Depictor
make -f Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/DependInfo.cmake --color=
Scanning dependencies of target FileParsers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 52%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/Mol2FileParser.cpp.o
[ 52%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolFileParser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/Mol2FileParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/Mol2FileParser.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/MolFileParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileParser.cpp
[ 53%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolSGroupParsing.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/MolSGroupParsing.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupParsing.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Embedder.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Embedder.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Embedder.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Embedder.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function 'void RDKit::DGeomHelpers::detail::embedHelper_(int, int, RDKit::DGeomHelpers::detail::EmbedArgs*, const RDKit::DGeomHelpers::EmbedParameters*)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 53%] Linking CXX shared library ../../../lib/libRDKitDistGeomHelpers.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/DistGeomHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitDistGeomHelpers.so.1 -o ../../../lib/libRDKitDistGeomHelpers.so.1.2019.09.1 CMakeFiles/DistGeomHelpers.dir/BoundsMatrixBuilder.cpp.o CMakeFiles/DistGeomHelpers.dir/Embedder.cpp.o  ../../../lib/libRDKitDistGeometry.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitDistGeomHelpers.so.1.2019.09.1 ../../../lib/libRDKitDistGeomHelpers.so.1 ../../../lib/libRDKitDistGeomHelpers.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/Mol2FileParser.cpp:37:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
[ 53%] Built target DistGeomHelpers
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupParsing.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
[ 53%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolSGroupWriting.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/MolSGroupWriting.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/Mol2FileParser.cpp:37:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/Mol2FileParser.cpp:37:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDGeom::Point3D&}; _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/Mol2FileParser.cpp:37:
/usr/include/c++/9/bits/stl_vector.h: In function 'RDKit::RWMol* RDKit::Mol2DataStreamToMol(std::istream*, bool, bool, RDKit::Mol2Type, bool)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 53%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolFileStereochem.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/MolFileStereochem.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileStereochem.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileParser.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileParser.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 53%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolFileWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/MolFileWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileWriter.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileParser.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:14:
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h: In function 'std::string RDKit::SGroupWriting::BuildV2000SDSLines(const RDKit::ROMol&)':
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:25: warning: '%3d' directive output may be truncated writing between 3 and 9 bytes into a region of size 4 [-Wformat-truncation=]
   24 |   snprintf(output, 5, " %3d", value);
      |                         ^~~
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:23: note: directive argument in the range [-23342212, 23342214]
   24 |   snprintf(output, 5, " %3d", value);
      |                       ^~~~~~
In file included from /usr/include/stdio.h:867,
                 from /usr/include/c++/9/cstdio:42,
                 from /usr/include/c++/9/ext/string_conversions.h:43,
                 from /usr/include/c++/9/bits/basic_string.h:6493,
                 from /usr/include/c++/9/string:55,
                 from /usr/include/c++/9/bits/locale_classes.h:40,
                 from /usr/include/c++/9/bits/ios_base.h:41,
                 from /usr/include/c++/9/ios:42,
                 from /usr/include/c++/9/ostream:38,
                 from /usr/include/c++/9/iterator:64,
                 from /usr/include/boost/iterator/iterator_traits.hpp:10,
                 from /usr/include/boost/range/mutable_iterator.hpp:23,
                 from /usr/include/boost/range/iterator.hpp:20,
                 from /usr/include/boost/range/begin.hpp:24,
                 from /usr/include/boost/algorithm/string/detail/sequence.hpp:17,
                 from /usr/include/boost/algorithm/string/join.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:11:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 5
   67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   68 |        __bos (__s), __fmt, __va_arg_pack ());
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:14:
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h: In function 'std::string RDKit::SGroupWriting::BuildV2000StringPropLines(unsigned int, const RDKit::ROMol&, const string&, const string&, unsigned int)':
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:25: warning: '%3d' directive output may be truncated writing between 3 and 9 bytes into a region of size 4 [-Wformat-truncation=]
   24 |   snprintf(output, 5, " %3d", value);
      |                         ^~~
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:23: note: directive argument in the range [-23342212, 23342214]
   24 |   snprintf(output, 5, " %3d", value);
      |                       ^~~~~~
In file included from /usr/include/stdio.h:867,
                 from /usr/include/c++/9/cstdio:42,
                 from /usr/include/c++/9/ext/string_conversions.h:43,
                 from /usr/include/c++/9/bits/basic_string.h:6493,
                 from /usr/include/c++/9/string:55,
                 from /usr/include/c++/9/bits/locale_classes.h:40,
                 from /usr/include/c++/9/bits/ios_base.h:41,
                 from /usr/include/c++/9/ios:42,
                 from /usr/include/c++/9/ostream:38,
                 from /usr/include/c++/9/iterator:64,
                 from /usr/include/boost/iterator/iterator_traits.hpp:10,
                 from /usr/include/boost/range/mutable_iterator.hpp:23,
                 from /usr/include/boost/range/iterator.hpp:20,
                 from /usr/include/boost/range/begin.hpp:24,
                 from /usr/include/boost/algorithm/string/detail/sequence.hpp:17,
                 from /usr/include/boost/algorithm/string/join.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:11:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 5
   67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   68 |        __bos (__s), __fmt, __va_arg_pack ());
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:14:
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h: In function 'std::string RDKit::SGroupWriting::BuildV2000STYLines(const RDKit::ROMol&)':
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:25: warning: '%3d' directive output may be truncated writing between 3 and 9 bytes into a region of size 4 [-Wformat-truncation=]
   24 |   snprintf(output, 5, " %3d", value);
      |                         ^~~
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:23: note: directive argument in the range [-23342212, 23342214]
   24 |   snprintf(output, 5, " %3d", value);
      |                       ^~~~~~
In file included from /usr/include/stdio.h:867,
                 from /usr/include/c++/9/cstdio:42,
                 from /usr/include/c++/9/ext/string_conversions.h:43,
                 from /usr/include/c++/9/bits/basic_string.h:6493,
                 from /usr/include/c++/9/string:55,
                 from /usr/include/c++/9/bits/locale_classes.h:40,
                 from /usr/include/c++/9/bits/ios_base.h:41,
                 from /usr/include/c++/9/ios:42,
                 from /usr/include/c++/9/ostream:38,
                 from /usr/include/c++/9/iterator:64,
                 from /usr/include/boost/iterator/iterator_traits.hpp:10,
                 from /usr/include/boost/range/mutable_iterator.hpp:23,
                 from /usr/include/boost/range/iterator.hpp:20,
                 from /usr/include/boost/range/begin.hpp:24,
                 from /usr/include/boost/algorithm/string/detail/sequence.hpp:17,
                 from /usr/include/boost/algorithm/string/join.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:11:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 5
   67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   68 |        __bos (__s), __fmt, __va_arg_pack ());
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:14:
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h: In function 'std::string RDKit::SGroupWriting::BuildV2000SBTLines(const RDKit::ROMol&)':
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:25: warning: '%3d' directive output may be truncated writing between 3 and 9 bytes into a region of size 4 [-Wformat-truncation=]
   24 |   snprintf(output, 5, " %3d", value);
      |                         ^~~
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:23: note: directive argument in the range [-23342212, 23342214]
   24 |   snprintf(output, 5, " %3d", value);
      |                       ^~~~~~
In file included from /usr/include/stdio.h:867,
                 from /usr/include/c++/9/cstdio:42,
                 from /usr/include/c++/9/ext/string_conversions.h:43,
                 from /usr/include/c++/9/bits/basic_string.h:6493,
                 from /usr/include/c++/9/string:55,
                 from /usr/include/c++/9/bits/locale_classes.h:40,
                 from /usr/include/c++/9/bits/ios_base.h:41,
                 from /usr/include/c++/9/ios:42,
                 from /usr/include/c++/9/ostream:38,
                 from /usr/include/c++/9/iterator:64,
                 from /usr/include/boost/iterator/iterator_traits.hpp:10,
                 from /usr/include/boost/range/mutable_iterator.hpp:23,
                 from /usr/include/boost/range/iterator.hpp:20,
                 from /usr/include/boost/range/begin.hpp:24,
                 from /usr/include/boost/algorithm/string/detail/sequence.hpp:17,
                 from /usr/include/boost/algorithm/string/join.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:11:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 5
   67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   68 |        __bos (__s), __fmt, __va_arg_pack ());
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:14:
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:25: warning: '%3d' directive output may be truncated writing between 3 and 9 bytes into a region of size 4 [-Wformat-truncation=]
   24 |   snprintf(output, 5, " %3d", value);
      |                         ^~~
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:23: note: directive argument in the range [-23342212, 23342214]
   24 |   snprintf(output, 5, " %3d", value);
      |                       ^~~~~~
In file included from /usr/include/stdio.h:867,
                 from /usr/include/c++/9/cstdio:42,
                 from /usr/include/c++/9/ext/string_conversions.h:43,
                 from /usr/include/c++/9/bits/basic_string.h:6493,
                 from /usr/include/c++/9/string:55,
                 from /usr/include/c++/9/bits/locale_classes.h:40,
                 from /usr/include/c++/9/bits/ios_base.h:41,
                 from /usr/include/c++/9/ios:42,
                 from /usr/include/c++/9/ostream:38,
                 from /usr/include/c++/9/iterator:64,
                 from /usr/include/boost/iterator/iterator_traits.hpp:10,
                 from /usr/include/boost/range/mutable_iterator.hpp:23,
                 from /usr/include/boost/range/iterator.hpp:20,
                 from /usr/include/boost/range/begin.hpp:24,
                 from /usr/include/boost/algorithm/string/detail/sequence.hpp:17,
                 from /usr/include/boost/algorithm/string/join.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:11:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 5
   67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   68 |        __bos (__s), __fmt, __va_arg_pack ());
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:14:
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h: In function 'std::string RDKit::SGroupWriting::BuildV2000SAPLines(int, const RDKit::SubstanceGroup&)':
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:25: warning: '%3d' directive output may be truncated writing between 3 and 11 bytes into a region of size 4 [-Wformat-truncation=]
   24 |   snprintf(output, 5, " %3d", value);
      |                         ^~~
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:23: note: directive argument in the range [-2147483647, 2147483647]
   24 |   snprintf(output, 5, " %3d", value);
      |                       ^~~~~~
In file included from /usr/include/stdio.h:867,
                 from /usr/include/c++/9/cstdio:42,
                 from /usr/include/c++/9/ext/string_conversions.h:43,
                 from /usr/include/c++/9/bits/basic_string.h:6493,
                 from /usr/include/c++/9/string:55,
                 from /usr/include/c++/9/bits/locale_classes.h:40,
                 from /usr/include/c++/9/bits/ios_base.h:41,
                 from /usr/include/c++/9/ios:42,
                 from /usr/include/c++/9/ostream:38,
                 from /usr/include/c++/9/iterator:64,
                 from /usr/include/boost/iterator/iterator_traits.hpp:10,
                 from /usr/include/boost/range/mutable_iterator.hpp:23,
                 from /usr/include/boost/range/iterator.hpp:20,
                 from /usr/include/boost/range/begin.hpp:24,
                 from /usr/include/boost/algorithm/string/detail/sequence.hpp:17,
                 from /usr/include/boost/algorithm/string/join.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:11:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 13 bytes into a destination of size 5
   67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   68 |        __bos (__s), __fmt, __va_arg_pack ());
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:14:
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h: In function 'std::string RDKit::SGroupWriting::BuildV2000SNCLines(const RDKit::ROMol&)':
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:25: warning: '%3d' directive output may be truncated writing between 3 and 9 bytes into a region of size 4 [-Wformat-truncation=]
   24 |   snprintf(output, 5, " %3d", value);
      |                         ^~~
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:23: note: directive argument in the range [-23342212, 23342214]
   24 |   snprintf(output, 5, " %3d", value);
      |                       ^~~~~~
In file included from /usr/include/stdio.h:867,
                 from /usr/include/c++/9/cstdio:42,
                 from /usr/include/c++/9/ext/string_conversions.h:43,
                 from /usr/include/c++/9/bits/basic_string.h:6493,
                 from /usr/include/c++/9/string:55,
                 from /usr/include/c++/9/bits/locale_classes.h:40,
                 from /usr/include/c++/9/bits/ios_base.h:41,
                 from /usr/include/c++/9/ios:42,
                 from /usr/include/c++/9/ostream:38,
                 from /usr/include/c++/9/iterator:64,
                 from /usr/include/boost/iterator/iterator_traits.hpp:10,
                 from /usr/include/boost/range/mutable_iterator.hpp:23,
                 from /usr/include/boost/range/iterator.hpp:20,
                 from /usr/include/boost/range/begin.hpp:24,
                 from /usr/include/boost/algorithm/string/detail/sequence.hpp:17,
                 from /usr/include/boost/algorithm/string/join.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:11:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 5
   67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   68 |        __bos (__s), __fmt, __va_arg_pack ());
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:14:
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h: In function 'std::string RDKit::SGroupWriting::BuildV2000SLBLines(const RDKit::ROMol&)':
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:25: warning: '%3d' directive output may be truncated writing between 3 and 9 bytes into a region of size 4 [-Wformat-truncation=]
   24 |   snprintf(output, 5, " %3d", value);
      |                         ^~~
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:23: note: directive argument in the range [-23342212, 23342214]
   24 |   snprintf(output, 5, " %3d", value);
      |                       ^~~~~~
In file included from /usr/include/stdio.h:867,
                 from /usr/include/c++/9/cstdio:42,
                 from /usr/include/c++/9/ext/string_conversions.h:43,
                 from /usr/include/c++/9/bits/basic_string.h:6493,
                 from /usr/include/c++/9/string:55,
                 from /usr/include/c++/9/bits/locale_classes.h:40,
                 from /usr/include/c++/9/bits/ios_base.h:41,
                 from /usr/include/c++/9/ios:42,
                 from /usr/include/c++/9/ostream:38,
                 from /usr/include/c++/9/iterator:64,
                 from /usr/include/boost/iterator/iterator_traits.hpp:10,
                 from /usr/include/boost/range/mutable_iterator.hpp:23,
                 from /usr/include/boost/range/iterator.hpp:20,
                 from /usr/include/boost/range/begin.hpp:24,
                 from /usr/include/boost/algorithm/string/detail/sequence.hpp:17,
                 from /usr/include/boost/algorithm/string/join.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:11:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 5
   67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   68 |        __bos (__s), __fmt, __va_arg_pack ());
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:14:
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h: In function 'std::string RDKit::SGroupWriting::BuildV2000SPLLines(const RDKit::ROMol&)':
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:25: warning: '%3d' directive output may be truncated writing between 3 and 9 bytes into a region of size 4 [-Wformat-truncation=]
   24 |   snprintf(output, 5, " %3d", value);
      |                         ^~~
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:23: note: directive argument in the range [-23342212, 23342214]
   24 |   snprintf(output, 5, " %3d", value);
      |                       ^~~~~~
In file included from /usr/include/stdio.h:867,
                 from /usr/include/c++/9/cstdio:42,
                 from /usr/include/c++/9/ext/string_conversions.h:43,
                 from /usr/include/c++/9/bits/basic_string.h:6493,
                 from /usr/include/c++/9/string:55,
                 from /usr/include/c++/9/bits/locale_classes.h:40,
                 from /usr/include/c++/9/bits/ios_base.h:41,
                 from /usr/include/c++/9/ios:42,
                 from /usr/include/c++/9/ostream:38,
                 from /usr/include/c++/9/iterator:64,
                 from /usr/include/boost/iterator/iterator_traits.hpp:10,
                 from /usr/include/boost/range/mutable_iterator.hpp:23,
                 from /usr/include/boost/range/iterator.hpp:20,
                 from /usr/include/boost/range/begin.hpp:24,
                 from /usr/include/boost/algorithm/string/detail/sequence.hpp:17,
                 from /usr/include/boost/algorithm/string/join.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:11:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 5
   67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   68 |        __bos (__s), __fmt, __va_arg_pack ());
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileStereochem.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileStereochem.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
[ 53%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/ForwardSDMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/ForwardSDMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/ForwardSDMolSupplier.cpp
/usr/include/c++/9/bits/vector.tcc: In function 'void RDKit::ClearSingleBondDirFlags(RDKit::ROMol&)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileParser.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In function 'bool RDKit::FileParserUtils::ParseV2000CTAB(std::istream*, unsigned int&, RDKit::RWMol*, RDKit::Conformer*&, bool&, unsigned int&, unsigned int&, bool)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 53%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SDMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/SDMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SDMolSupplier.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileWriter.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<unsigned int, RDGeom::Point3D>}; _Tp = std::pair<unsigned int, RDGeom::Point3D>; _Alloc = std::allocator<std::pair<unsigned int, RDGeom::Point3D> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::pair<unsigned int, RDGeom::Point3D> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function 'void RDKit::{anonymous}::ParseV3000AtomBlock(std::istream*, unsigned int&, unsigned int, RDKit::RWMol*, RDKit::Conformer*)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:17,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileWriter.cpp:13:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<Rankers::pairLess<unsigned int, RDGeom::Point3D> >]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairLess<unsigned int, RDGeom::Point3D> >]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:17,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileWriter.cpp:13:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >; _Distance = int; _Tp = std::pair<unsigned int, RDGeom::Point3D>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairLess<unsigned int, RDGeom::Point3D> >]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:17,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileWriter.cpp:13:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairLess<unsigned int, RDGeom::Point3D> >]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileWriter.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In function 'void RDKit::GetMolFileAtomProperties(const RDKit::Atom*, const RDKit::Conformer*, int&, int&, unsigned int&, double&, double&, double&)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:17,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileWriter.cpp:13:
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/ForwardSDMolSupplier.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SDMolSupplier.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::fpos<__mbstate_t>&}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 53%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SDWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/SDWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SDWriter.cpp
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SDMolSupplier.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual RDKit::ROMol* RDKit::SDMolSupplier::next()':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In member function 'unsigned int RDKit::SDMolSupplier::length()':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In member function 'void RDKit::SDMolSupplier::moveTo(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 54%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SmilesMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/SmilesMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SmilesMolSupplier.cpp
[ 54%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SmilesWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/SmilesWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SmilesWriter.cpp
[ 54%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TDTMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/TDTMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TDTMolSupplier.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SmilesMolSupplier.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 54%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TDTWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/TDTWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TDTWriter.cpp
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 54%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TplFileParser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/TplFileParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TplFileParser.cpp
[ 54%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TplFileWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/TplFileWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TplFileWriter.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/token_functions.hpp:34,
                 from /usr/include/boost/token_iterator.hpp:24,
                 from /usr/include/boost/tokenizer.hpp:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TDTMolSupplier.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/token_functions.hpp:34,
                 from /usr/include/boost/token_iterator.hpp:24,
                 from /usr/include/boost/tokenizer.hpp:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TDTMolSupplier.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/token_functions.hpp:34,
                 from /usr/include/boost/token_iterator.hpp:24,
                 from /usr/include/boost/tokenizer.hpp:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TDTMolSupplier.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In function 'void RDKit::TDTParseUtils::ParseNumberList(std::string, std::vector<T>&, std::istream*) [with T = double]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 55%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/PDBParser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/PDBParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/PDBParser.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TplFileParser.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
[ 55%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/PDBWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/PDBWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/PDBWriter.cpp
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TplFileParser.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/token_functions.hpp:34,
                 from /usr/include/boost/token_iterator.hpp:24,
                 from /usr/include/boost/tokenizer.hpp:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TDTMolSupplier.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In member function 'RDKit::ROMol* RDKit::TDTMolSupplier::parseMol(std::string)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TplFileParser.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 55%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/PDBSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/PDBSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/PDBSupplier.cpp
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TplFileParser.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In function 'void RDKit::ParseTPLAtomLine(std::string, unsigned int, RDKit::RWMol*, RDKit::Conformer*)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function 'RDKit::Conformer* RDKit::ParseConfData(std::istream*, unsigned int&, RDKit::RWMol*, unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 55%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/XYZFileWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/XYZFileWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/XYZFileWriter.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/PDBParser.cpp:16:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
[ 55%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MaeMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/MaeMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MaeMolSupplier.cpp
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/PDBParser.cpp:16:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/PDBParser.cpp:16:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/PDBParser.cpp:16:
/usr/include/c++/9/bits/stl_vector.h: In function 'void RDKit::PDBConformerLine(RDKit::RWMol*, const char*, unsigned int, RDKit::Conformer*&, int&)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function 'void RDKit::PDBAtomLine(RDKit::RWMol*, const char*, unsigned int, unsigned int, std::map<int, RDKit::Atom*>&)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 55%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/ProximityBonds.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/ProximityBonds.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/ProximityBonds.cpp
[ 55%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SequenceParsers.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/SequenceParsers.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SequenceParsers.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MaeMolSupplier.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MaeMolSupplier.cpp:13:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 56%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SequenceWriters.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/SequenceWriters.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SequenceWriters.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MaeMolSupplier.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MaeMolSupplier.cpp:13:
/usr/include/c++/9/bits/stl_vector.h: In function 'void RDKit::addAtoms(std::shared_ptr<schrodinger::mae::Block>&, RDKit::RWMol&)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MaeMolSupplier.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'virtual RDKit::ROMol* RDKit::MaeMolSupplier::next()':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SequenceParsers.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
[ 56%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SVGParser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/SVGParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SVGParser.cpp
/usr/include/c++/9/bits/vector.tcc: In function 'RDKit::RWMol* RDKit::FASTAToMol(const char*, bool, int)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SVGParser.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SVGParser.cpp:10:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SVGParser.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDGeom::Point3D&}; _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SVGParser.cpp:10:
/usr/include/c++/9/bits/stl_vector.h: In function 'RDKit::RWMol* RDKit::RDKitSVGToMol(std::istream*, bool, bool)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 56%] Linking CXX shared library ../../../lib/libRDKitFileParsers.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/FileParsers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitFileParsers.so.1 -o ../../../lib/libRDKitFileParsers.so.1.2019.09.1 CMakeFiles/FileParsers.dir/Mol2FileParser.cpp.o CMakeFiles/FileParsers.dir/MolFileParser.cpp.o CMakeFiles/FileParsers.dir/MolSGroupParsing.cpp.o CMakeFiles/FileParsers.dir/MolSGroupWriting.cpp.o CMakeFiles/FileParsers.dir/MolFileStereochem.cpp.o CMakeFiles/FileParsers.dir/MolFileWriter.cpp.o CMakeFiles/FileParsers.dir/ForwardSDMolSupplier.cpp.o CMakeFiles/FileParsers.dir/SDMolSupplier.cpp.o CMakeFiles/FileParsers.dir/SDWriter.cpp.o CMakeFiles/FileParsers.dir/SmilesMolSupplier.cpp.o CMakeFiles/FileParsers.dir/SmilesWriter.cpp.o CMakeFiles/FileParsers.dir/TDTMolSupplier.cpp.o CMakeFiles/FileParsers.dir/TDTWriter.cpp.o CMakeFiles/FileParsers.dir/TplFileParser.cpp.o CMakeFiles/FileParsers.dir/TplFileWriter.cpp.o CMakeFiles/FileParsers.dir/PDBParser.cpp.o CMakeFiles/FileParsers.dir/PDBWriter.cpp.o CMakeFiles/FileParsers.dir/PDBSupplier.cpp.o CMakeFiles/FileParsers.dir/XYZFileWriter.cpp.o CMakeFiles/FileParsers.dir/MaeMolSupplier.cpp.o CMakeFiles/FileParsers.dir/ProximityBonds.cpp.o CMakeFiles/FileParsers.dir/SequenceParsers.cpp.o CMakeFiles/FileParsers.dir/SequenceWriters.cpp.o CMakeFiles/FileParsers.dir/SVGParser.cpp.o  ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1 ../../../lib/libRDKitFileParsers.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 56%] Built target FileParsers
make -f External/CoordGen/CMakeFiles/testCoordGen.dir/build.make External/CoordGen/CMakeFiles/testCoordGen.dir/depend
make -f Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build.make Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/depend
make -f Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/build.make Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/depend
make -f Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/External/CoordGen /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/CMakeFiles/testCoordGen.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ForceField/UFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/UFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ForceField/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/DependInfo.cmake --color=
Scanning dependencies of target testCoordGen
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Scanning dependencies of target testUFFForceField
make -f External/CoordGen/CMakeFiles/testCoordGen.dir/build.make External/CoordGen/CMakeFiles/testCoordGen.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Scanning dependencies of target testMMFFForceField
make -f Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build.make Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/build.make Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Scanning dependencies of target graphmolTestsCatch
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 56%] Building CXX object External/CoordGen/CMakeFiles/testCoordGen.dir/test.cpp.o
[ 56%] Building CXX object Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/testUFFForceField.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DIN_COORDGEN -DIN_MAEPARSER -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testCoordGen.dir/test.cpp.o -c /<<PKGBUILDDIR>>/External/CoordGen/test.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/UFF && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testUFFForceField.dir/testUFFForceField.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/testUFFForceField.cpp
[ 56%] Building CXX object Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/testMMFFForceField.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/MMFF && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testMMFFForceField.dir/testMMFFForceField.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/testMMFFForceField.cpp
[ 56%] Building CXX object Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/graphmolTestsCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/catch_tests.cpp
/<<PKGBUILDDIR>>/Code/GraphMol/catch_tests.cpp: In function 'void ____C_A_T_C_H____T_E_S_T____45()':
/<<PKGBUILDDIR>>/Code/GraphMol/catch_tests.cpp:350:14: warning: unused variable 'm' [-Wunused-variable]
  350 |         auto m = SmilesToMol(pr.first);
      |              ^
/<<PKGBUILDDIR>>/Code/GraphMol/catch_tests.cpp:363:14: warning: unused variable 'm' [-Wunused-variable]
  363 |         auto m = SmilesToMol(pr.first);
      |              ^
/<<PKGBUILDDIR>>/Code/GraphMol/catch_tests.cpp:376:14: warning: unused variable 'm' [-Wunused-variable]
  376 |         auto m = SmilesToMol(pr.first);
      |              ^
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/External/CoordGen/test.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/External/CoordGen/test.cpp:13:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/External/CoordGen/test.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/External/CoordGen/test.cpp:13:
/usr/include/c++/9/bits/stl_vector.h: In function 'unsigned int RDKit::CoordGen::addCoords(T&, const RDKit::CoordGen::CoordGenParams*) [with T = RDKit::ROMol]':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/External/CoordGen/test.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, const char*)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/ForceField/MMFF/testMMFFForceField.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In function 'void testMMFFTorsionConstraints()':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 56%] Linking CXX executable testCoordGen
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen && /usr/bin/cmake -E cmake_link_script CMakeFiles/testCoordGen.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testCoordGen.dir/test.cpp.o  -o testCoordGen  -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../lib/libRDKitDepictor.so.1.2019.09.1 ../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../lib/libRDKitAlignment.so.1.2019.09.1 ../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../lib/libRDKitForceField.so.1.2019.09.1 ../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 56%] Built target testCoordGen
make -f Code/GraphMol/CMakeFiles/graphmolTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolTest1.dir/DependInfo.cmake --color=
Scanning dependencies of target graphmolTest1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolTest1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 56%] Building CXX object Code/GraphMol/CMakeFiles/graphmolTest1.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/graphmolTest1.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/test1.cpp
[ 56%] Linking CXX executable testUFFForceField
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/UFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testUFFForceField.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testUFFForceField.dir/testUFFForceField.cpp.o  -o testUFFForceField  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 56%] Built target testUFFForceField
make -f Code/GraphMol/CMakeFiles/hanoiTest.dir/build.make Code/GraphMol/CMakeFiles/hanoiTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/hanoiTest.dir/DependInfo.cmake --color=
Scanning dependencies of target hanoiTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/hanoiTest.dir/build.make Code/GraphMol/CMakeFiles/hanoiTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 56%] Building CXX object Code/GraphMol/CMakeFiles/hanoiTest.dir/hanoitest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/hanoiTest.dir/hanoitest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/hanoitest.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/new_canon.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/hanoitest.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/test1.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/test1.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In member function 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/test1.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 56%] Linking CXX executable testMMFFForceField
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/MMFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMMFFForceField.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMMFFForceField.dir/testMMFFForceField.cpp.o  -o testMMFFForceField  ../../../lib/libRDKitDistGeomHelpers.so.1.2019.09.1 ../../../lib/libRDKitDistGeometry.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 56%] Built target testMMFFForceField
make -f Code/GraphMol/CMakeFiles/testSGroup.dir/build.make Code/GraphMol/CMakeFiles/testSGroup.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/testSGroup.dir/DependInfo.cmake --color=
Scanning dependencies of target testSGroup
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/testSGroup.dir/build.make Code/GraphMol/CMakeFiles/testSGroup.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 56%] Building CXX object Code/GraphMol/CMakeFiles/testSGroup.dir/testSGroup.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testSGroup.dir/testSGroup.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/testSGroup.cpp
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, const char*)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/catch_tests.cpp:3:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/catch_tests.cpp:3:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 56%] Linking CXX executable hanoiTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/hanoiTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/hanoiTest.dir/hanoitest.cpp.o  -o hanoiTest  ../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../lib/libRDKitDepictor.so.1.2019.09.1 ../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../lib/libRDKitAlignment.so.1.2019.09.1 ../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitForceField.so.1.2019.09.1 ../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 56%] Built target hanoiTest
make -f Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/DependInfo.cmake --color=
Scanning dependencies of target graphmoltestPicklerGlobalSetting
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 56%] Building CXX object Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/testPicklerGlobalSettings.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/graphmoltestPicklerGlobalSetting.dir/testPicklerGlobalSettings.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/testPicklerGlobalSettings.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/catch_tests.cpp:3:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/catch_tests.cpp:3:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/catch_tests.cpp:3:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/testSGroup.cpp:14:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/testPicklerGlobalSettings.cpp:33:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 57%] Linking CXX executable testSGroup
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSGroup.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testSGroup.dir/testSGroup.cpp.o  -o testSGroup  ../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../lib/libRDKitDepictor.so.1.2019.09.1 ../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../lib/libRDKitAlignment.so.1.2019.09.1 ../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../lib/libRDKitForceField.so.1.2019.09.1 ../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Built target testSGroup
make -f Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/DependInfo.cmake --color=
Scanning dependencies of target graphmolMolOpsTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Building CXX object Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/molopstest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/graphmolMolOpsTest.dir/molopstest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/molopstest.cpp
[ 57%] Linking CXX executable graphmolTest1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolTest1.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/graphmolTest1.dir/test1.cpp.o  -o graphmolTest1  ../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../lib/libRDKitDepictor.so.1.2019.09.1 ../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../lib/libRDKitForceField.so.1.2019.09.1 ../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../lib/libRDKitAlignment.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Built target graphmolTest1
make -f Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/DependInfo.cmake --color=
Scanning dependencies of target graphmoltestChirality
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Building CXX object Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/testChirality.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/graphmoltestChirality.dir/testChirality.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/testChirality.cpp
[ 57%] Linking CXX executable graphmoltestPicklerGlobalSetting
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmoltestPicklerGlobalSetting.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/graphmoltestPicklerGlobalSetting.dir/testPicklerGlobalSettings.cpp.o  -o graphmoltestPicklerGlobalSetting  ../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../lib/libRDKitDepictor.so.1.2019.09.1 ../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../lib/libRDKitAlignment.so.1.2019.09.1 ../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../lib/libRDKitForceField.so.1.2019.09.1 ../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Built target graphmoltestPicklerGlobalSetting
make -f Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/DependInfo.cmake --color=
Scanning dependencies of target graphmoltestPickler
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Building CXX object Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/testPickler.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/graphmoltestPickler.dir/testPickler.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/testPickler.cpp
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/catch_tests.cpp:3:
/usr/include/c++/9/bits/stl_vector.h: In function 'void ____C_A_T_C_H____T_E_S_T____35()':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/catch_tests.cpp:3:
/usr/include/c++/9/bits/vector.tcc: In function 'void ____C_A_T_C_H____T_E_S_T____7()':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/molopstest.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/molopstest.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In member function 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/molopstest.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/testPickler.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/testPickler.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/testPickler.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 58%] Linking CXX executable graphmolTestsCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolTestsCatch.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/graphmolTestsCatch.dir/catch_tests.cpp.o  -o graphmolTestsCatch  ../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../lib/libRDKitDepictor.so.1.2019.09.1 ../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../lib/libRDKitAlignment.so.1.2019.09.1 ../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitForceField.so.1.2019.09.1 ../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Built target graphmolTestsCatch
make -f Code/GraphMol/CMakeFiles/molBundleTest.dir/build.make Code/GraphMol/CMakeFiles/molBundleTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/molBundleTest.dir/DependInfo.cmake --color=
Scanning dependencies of target molBundleTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/molBundleTest.dir/build.make Code/GraphMol/CMakeFiles/molBundleTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Building CXX object Code/GraphMol/CMakeFiles/molBundleTest.dir/testMolBundle.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/molBundleTest.dir/testMolBundle.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/testMolBundle.cpp
[ 58%] Linking CXX executable graphmoltestPickler
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmoltestPickler.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/graphmoltestPickler.dir/testPickler.cpp.o  -o graphmoltestPickler  ../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../lib/libRDKitDepictor.so.1.2019.09.1 ../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../lib/libRDKitAlignment.so.1.2019.09.1 ../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../lib/libRDKitForceField.so.1.2019.09.1 ../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Built target graphmoltestPickler
make -f Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/build.make Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/DependInfo.cmake --color=
Scanning dependencies of target resMolSupplierTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/build.make Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Building CXX object Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/resMolSupplierTest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/resMolSupplierTest.dir/resMolSupplierTest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/resMolSupplierTest.cpp
[ 58%] Linking CXX executable graphmoltestChirality
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmoltestChirality.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/graphmoltestChirality.dir/testChirality.cpp.o  -o graphmoltestChirality  ../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../lib/libRDKitDepictor.so.1.2019.09.1 ../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../lib/libRDKitAlignment.so.1.2019.09.1 ../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../lib/libRDKitForceField.so.1.2019.09.1 ../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Built target graphmoltestChirality
make -f Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Depictor /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/DependInfo.cmake --color=
Scanning dependencies of target testDepictor
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/testDepictor.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/c++  -DIN_COORDGEN -DRDKIT_DEPICTOR_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testDepictor.dir/testDepictor.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp
[ 58%] Linking CXX executable molBundleTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/molBundleTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/molBundleTest.dir/testMolBundle.cpp.o  -o molBundleTest  ../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../lib/libRDKitDepictor.so.1.2019.09.1 ../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../lib/libRDKitAlignment.so.1.2019.09.1 ../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../lib/libRDKitForceField.so.1.2019.09.1 ../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Built target molBundleTest
make -f Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build.make Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/DependInfo.cmake --color=
Scanning dependencies of target rdDepictor
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build.make Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Building CXX object Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/rdDepictor.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap && /usr/bin/c++  -DIN_COORDGEN -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdDepictor_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdDepictor.dir/rdDepictor.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/Wrap/rdDepictor.cpp
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/molopstest.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In function 'void testIssue212()':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function 'void testAddConformers()':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/set:60,
                 from /<<PKGBUILDDIR>>/Code/Query/SetQuery.h:13,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:13:
/usr/include/c++/9/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_erase_aux(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator) [with _Key = int; _Val = std::pair<const int, RDGeom::Point2D>; _KeyOfValue = std::_Select1st<std::pair<const int, RDGeom::Point2D> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]':
/usr/include/c++/9/bits/stl_tree.h:2504:5: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
 2504 |     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 58%] Linking CXX executable resMolSupplierTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/resMolSupplierTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/resMolSupplierTest.dir/resMolSupplierTest.cpp.o  -o resMolSupplierTest  ../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../lib/libRDKitDepictor.so.1.2019.09.1 ../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../lib/libRDKitAlignment.so.1.2019.09.1 ../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../lib/libRDKitForceField.so.1.2019.09.1 ../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Built target resMolSupplierTest
make -f Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/DependInfo.cmake --color=
Scanning dependencies of target cxsmilesTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/cxsmiles_test.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/cxsmilesTest.dir/cxsmiles_test.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/cxsmiles_test.cpp
/usr/include/c++/9/bits/stl_vector.h: In function 'void testAddHsCoords()':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/Wrap/rdDepictor.cpp:18:
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h: In member function 'RDDepict::EmbeddedAtom RDDepict::EmbeddedFrag::GetEmbeddedAtom(unsigned int) const':
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h:314:18: warning: implicitly-declared 'RDDepict::EmbeddedAtom::EmbeddedAtom(const RDDepict::EmbeddedAtom&)' is deprecated [-Wdeprecated-copy]
  314 |     return posi->second;
      |                  ^~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h:59:17: note: because 'RDDepict::EmbeddedAtom' has user-provided 'RDDepict::EmbeddedAtom& RDDepict::EmbeddedAtom::operator=(const RDDepict::EmbeddedAtom&)'
   59 |   EmbeddedAtom &operator=(const EmbeddedAtom &other) {
      |                 ^~~~~~~~
/usr/include/c++/9/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDGeom::Point2D>; _KeyOfValue = std::_Select1st<std::pair<const int, RDGeom::Point2D> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:26,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:13:
/usr/include/c++/9/bits/stl_map.h: In function 'void testIssue2091304()':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In function 'void testIssue3122141()':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In function 'void testIssue2303566()':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In function 'void testIssue3135833()':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In function 'void test4()':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/9/set:60,
                 from /<<PKGBUILDDIR>>/Code/Query/SetQuery.h:13,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:13:
/usr/include/c++/9/bits/stl_tree.h:1220:2: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
 1220 |  _M_erase_aux(__position);
      |  ^~~~~~~~~~~~
/usr/include/c++/9/bits/stl_tree.h:1220:2: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
 1220 |  _M_erase_aux(__position);
      |  ^~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:26,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:13:
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/9/set:60,
                 from /<<PKGBUILDDIR>>/Code/Query/SetQuery.h:13,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:13:
/usr/include/c++/9/bits/stl_tree.h:1220:2: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
 1220 |  _M_erase_aux(__position);
      |  ^~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/Wrap/rdDepictor.cpp:17:
/<<PKGBUILDDIR>>/Code/Geometry/point.h: In function 'unsigned int RDDepict::Compute2DCoords(RDKit::ROMol&, bool, bool, boost::python::dict&, unsigned int, unsigned int, int, bool, double, bool)':
/<<PKGBUILDDIR>>/Code/Geometry/point.h:293:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point2D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
  293 |     x = other.x;
      |         ~~~~~~^
[ 58%] Linking CXX executable testDepictor
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDepictor.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testDepictor.dir/testDepictor.cpp.o  -o testDepictor  ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Built target testDepictor
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/DependInfo.cmake --color=
Scanning dependencies of target smiTestCatch
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/smiTestCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/catch_tests.cpp
[ 59%] Linking CXX shared module ../../../../rdkit/Chem/rdDepictor.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdDepictor.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdDepictor.so CMakeFiles/rdDepictor.dir/rdDepictor.cpp.o  ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 59%] Built target rdDepictor
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/DependInfo.cmake --color=
Scanning dependencies of target smiTest1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 59%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/test.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/smiTest1.dir/test.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/test.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/molopstest.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::Dict::setPODVal(const string&, T) [with T = int]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 59%] Linking CXX executable cxsmilesTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/cxsmilesTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/cxsmilesTest.dir/cxsmiles_test.cpp.o  -o cxsmilesTest  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 59%] Built target cxsmilesTest
make -f Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/DependInfo.cmake --color=
Scanning dependencies of target testMol2ToMol
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 59%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/testMol2ToMol.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testMol2ToMol.dir/testMol2ToMol.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMol2ToMol.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/test.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
[ 59%] Linking CXX executable testMol2ToMol
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMol2ToMol.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMol2ToMol.dir/testMol2ToMol.cpp.o  -o testMol2ToMol  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 59%] Built target testMol2ToMol
make -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/DependInfo.cmake --color=
Scanning dependencies of target fileParsersTest1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 60%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/fileParsersTest1.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/test1.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/catch_tests.cpp:14:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/catch_tests.cpp:14:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/test1.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/test1.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In member function 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/test1.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/test1.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In function 'void testIssue2963522()':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 61%] Linking CXX executable graphmolMolOpsTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolMolOpsTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/graphmolMolOpsTest.dir/molopstest.cpp.o  -o graphmolMolOpsTest  ../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../lib/libRDKitDepictor.so.1.2019.09.1 ../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../lib/libRDKitAlignment.so.1.2019.09.1 ../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitForceField.so.1.2019.09.1 ../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 61%] Built target graphmolMolOpsTest
make -f Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/DependInfo.cmake --color=
Scanning dependencies of target testPropertyLists
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 61%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/testPropertyLists.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testPropertyLists.dir/testPropertyLists.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testPropertyLists.cpp
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, const char*)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In function 'void testBug3525799()':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 61%] Linking CXX executable smiTest1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/smiTest1.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/smiTest1.dir/test.cpp.o  -o smiTest1  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 61%] Built target smiTest1
make -f Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/DependInfo.cmake --color=
Scanning dependencies of target testMolSupplier
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 61%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/testMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testMolSupplier.dir/testMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMolSupplier.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMolSupplier.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::fpos<__mbstate_t>&}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testPropertyLists.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testPropertyLists.cpp:13:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In function 'void testGitHub23()':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMolSupplier.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In function 'void testSetStreamIndices()':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testPropertyLists.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 61%] Linking CXX executable smiTestCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/smiTestCatch.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/smiTestCatch.dir/catch_tests.cpp.o  -o smiTestCatch  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 61%] Built target smiTestCatch
make -f Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/DependInfo.cmake --color=
Scanning dependencies of target testMolWriter
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 61%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/testMolWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testMolWriter.dir/testMolWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMolWriter.cpp
[ 62%] Linking CXX executable testMolSupplier
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolSupplier.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMolSupplier.dir/testMolSupplier.cpp.o  -o testMolSupplier  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitRDStreams.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
[ 62%] Linking CXX executable fileParsersTest1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/fileParsersTest1.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/fileParsersTest1.dir/test1.cpp.o  -o fileParsersTest1  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Built target testMolSupplier
make -f Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/DependInfo.cmake --color=
Scanning dependencies of target testTplParser
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/testTpls.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testTplParser.dir/testTpls.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testTpls.cpp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Built target fileParsersTest1
make -f Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/DependInfo.cmake --color=
Scanning dependencies of target testSequence
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/testSequence.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testSequence.dir/testSequence.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testSequence.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMolWriter.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMolWriter.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMolWriter.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 62%] Linking CXX executable testSequence
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSequence.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testSequence.dir/testSequence.cpp.o  -o testSequence  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Built target testSequence
make -f Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/DependInfo.cmake --color=
Scanning dependencies of target testExtendedStereoParsing
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/testExtendedStereoParsing.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testExtendedStereoParsing.dir/testExtendedStereoParsing.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testExtendedStereoParsing.cpp
[ 62%] Linking CXX executable testTplParser
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testTplParser.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testTplParser.dir/testTpls.cpp.o  -o testTplParser  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Built target testTplParser
make -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/DependInfo.cmake --color=
Scanning dependencies of target fileParsersCatchTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/fileParsersCatchTest.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/catch_tests.cpp
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMolWriter.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In function 'void testIssue265()':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 62%] Linking CXX executable testExtendedStereoParsing
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testExtendedStereoParsing.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testExtendedStereoParsing.dir/testExtendedStereoParsing.cpp.o  -o testExtendedStereoParsing  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Built target testExtendedStereoParsing
make -f Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/DependInfo.cmake --color=
Scanning dependencies of target substructTestCatch
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Building CXX object Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBSTRUCTMATCH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/substructTestCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/catch_tests.cpp
[ 62%] Linking CXX executable testMolWriter
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolWriter.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMolWriter.dir/testMolWriter.cpp.o  -o testMolWriter  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Built target testMolWriter
make -f Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/DependInfo.cmake --color=
Scanning dependencies of target testSubstructMatch
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Building CXX object Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBSTRUCTMATCH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testSubstructMatch.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/test1.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/test1.cpp:17:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
[ 62%] Linking CXX executable testPropertyLists
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testPropertyLists.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testPropertyLists.dir/testPropertyLists.cpp.o  -o testPropertyLists  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Built target testPropertyLists
make -f Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/DependInfo.cmake --color=
Scanning dependencies of target Descriptors
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/Crippen.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Descriptors.dir/Crippen.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Crippen.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/catch_tests.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/catch_tests.cpp:13:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In function 'void test5QueryRoot()':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Crippen.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/catch_tests.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/catch_tests.cpp:13:
/usr/include/c++/9/bits/stl_vector.h: In member function 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDKit::Descriptors::CrippenParams&}; _Tp = RDKit::Descriptors::CrippenParams; _Alloc = std::allocator<RDKit::Descriptors::CrippenParams>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Descriptors::CrippenParams>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Descriptors::CrippenParams*, std::vector<RDKit::Descriptors::CrippenParams> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/catch_tests.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Crippen.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Descriptors::CrippenParamCollection::CrippenParamCollection(const string&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Descriptors::CrippenParams*, std::vector<RDKit::Descriptors::CrippenParams> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/catch_tests.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/catch_tests.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
[ 63%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MolDescriptors.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Descriptors.dir/MolDescriptors.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MolDescriptors.cpp
[ 63%] Linking CXX executable testSubstructMatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSubstructMatch.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testSubstructMatch.dir/test1.cpp.o  -o testSubstructMatch  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 63%] Built target testSubstructMatch
make -f Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/DependInfo.cmake --color=
Scanning dependencies of target chemTransformsTestCatch
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 64%] Building CXX object Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/c++  -DRDKIT_CHEMTRANSFORMS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/chemTransformsTestCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/catch_tests.cpp
[ 64%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MolSurf.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Descriptors.dir/MolSurf.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MolSurf.cpp
/usr/include/c++/9/bits/vector.tcc: In function 'void ____C_A_T_C_H____T_E_S_T____38()':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MolSurf.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 64%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/Lipinski.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Descriptors.dir/Lipinski.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Lipinski.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/catch_tests.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/catch_tests.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 64%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/ConnectivityDescriptors.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Descriptors.dir/ConnectivityDescriptors.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/ConnectivityDescriptors.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/ConnectivityDescriptors.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 64%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MQN.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Descriptors.dir/MQN.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MQN.cpp
[ 64%] Linking CXX executable substructTestCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/cmake -E cmake_link_script CMakeFiles/substructTestCatch.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/substructTestCatch.dir/catch_tests.cpp.o  -o substructTestCatch  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 64%] Built target substructTestCatch
[ 64%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/Property.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Descriptors.dir/Property.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Property.cpp
[ 64%] Linking CXX executable fileParsersCatchTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/fileParsersCatchTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/fileParsersCatchTest.dir/catch_tests.cpp.o  -o fileParsersCatchTest  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 64%] Built target fileParsersCatchTest
[ 65%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/AUTOCORR2D.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Descriptors.dir/AUTOCORR2D.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/AUTOCORR2D.cpp
make -f Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/DependInfo.cmake --color=
Scanning dependencies of target testChemTransforms
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 65%] Building CXX object Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/testChemTransforms.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/c++  -DRDKIT_CHEMTRANSFORMS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testChemTransforms.dir/testChemTransforms.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/testChemTransforms.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Property.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Property.cpp:32:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'std::vector<double> RDKit::Descriptors::Properties::computeProperties(const RDKit::ROMol&, bool) const':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
make -f Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/DependInfo.cmake --color=
Scanning dependencies of target filterCatalogTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 65%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/filtercatalogtest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/filterCatalogTest.dir/filtercatalogtest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/filtercatalogtest.cpp
[ 65%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/Data3Ddescriptors.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Descriptors.dir/Data3Ddescriptors.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Data3Ddescriptors.cpp
[ 65%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MolData3Ddescriptors.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Descriptors.dir/MolData3Ddescriptors.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MolData3Ddescriptors.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/testChemTransforms.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/filtercatalogtest.cpp:33:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, const char*)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In function 'void testFilterCatalogEntry()':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 65%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/USRDescriptor.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Descriptors.dir/USRDescriptor.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/USRDescriptor.cpp
[ 65%] Linking CXX executable filterCatalogTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/filterCatalogTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/filterCatalogTest.dir/filtercatalogtest.cpp.o  -o filterCatalogTest  ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 -lboost_serialization ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 65%] Built target filterCatalogTest
make -f Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build.make Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/DependInfo.cmake --color=
Scanning dependencies of target rdfiltercatalog
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build.make Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 65%] Building CXX object Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/rdfiltercatalog.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfiltercatalog_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdfiltercatalog.dir/rdfiltercatalog.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Wrap/rdfiltercatalog.cpp
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, const char*)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 65%] Building CXX object Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/FilterCatalog.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfiltercatalog_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdfiltercatalog.dir/FilterCatalog.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Wrap/FilterCatalog.cpp
[ 65%] Linking CXX executable chemTransformsTestCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemTransformsTestCatch.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/chemTransformsTestCatch.dir/catch_tests.cpp.o  -o chemTransformsTestCatch  ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 65%] Built target chemTransformsTestCatch
make -f Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/DependInfo.cmake --color=
Scanning dependencies of target testFragCatalog
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 65%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testFragCatalog.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/test1.cpp
[ 65%] Linking CXX shared library ../../../lib/libRDKitDescriptors.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/Descriptors.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitDescriptors.so.1 -o ../../../lib/libRDKitDescriptors.so.1.2019.09.1 CMakeFiles/Descriptors.dir/Crippen.cpp.o CMakeFiles/Descriptors.dir/MolDescriptors.cpp.o CMakeFiles/Descriptors.dir/MolSurf.cpp.o CMakeFiles/Descriptors.dir/Lipinski.cpp.o CMakeFiles/Descriptors.dir/ConnectivityDescriptors.cpp.o CMakeFiles/Descriptors.dir/MQN.cpp.o CMakeFiles/Descriptors.dir/Property.cpp.o CMakeFiles/Descriptors.dir/AUTOCORR2D.cpp.o CMakeFiles/Descriptors.dir/Data3Ddescriptors.cpp.o CMakeFiles/Descriptors.dir/MolData3Ddescriptors.cpp.o CMakeFiles/Descriptors.dir/USRDescriptor.cpp.o  ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1 ../../../lib/libRDKitDescriptors.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 65%] Built target Descriptors
make -f Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build.make Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/DependInfo.cmake --color=
Scanning dependencies of target rdfragcatalog
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build.make Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 65%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/rdfragcatalog.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfragcatalog_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdfragcatalog.dir/rdfragcatalog.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap/rdfragcatalog.cpp
[ 65%] Linking CXX executable testChemTransforms
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/cmake -E cmake_link_script CMakeFiles/testChemTransforms.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testChemTransforms.dir/testChemTransforms.cpp.o  -o testChemTransforms  ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 65%] Built target testChemTransforms
make -f Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/DependInfo.cmake --color=
Scanning dependencies of target testAUTOCORR2D
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 66%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/testAUTOCORR2D.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testAUTOCORR2D.dir/testAUTOCORR2D.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/testAUTOCORR2D.cpp
[ 66%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragCatalog.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfragcatalog_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdfragcatalog.dir/FragCatalog.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap/FragCatalog.cpp
[ 66%] Linking CXX executable testAUTOCORR2D
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/testAUTOCORR2D.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testAUTOCORR2D.dir/testAUTOCORR2D.cpp.o  -o testAUTOCORR2D  ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 66%] Built target testAUTOCORR2D
[ 66%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragCatParams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfragcatalog_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdfragcatalog.dir/FragCatParams.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap/FragCatParams.cpp
[ 66%] Linking CXX executable testFragCatalog
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFragCatalog.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testFragCatalog.dir/test1.cpp.o  -o testFragCatalog  ../../../lib/libRDKitFragCatalog.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 66%] Built target testFragCatalog
[ 66%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragCatGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfragcatalog_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdfragcatalog.dir/FragCatGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap/FragCatGenerator.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap/FragCatalog.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 66%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragFPGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfragcatalog_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdfragcatalog.dir/FragFPGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap/FragFPGenerator.cpp
make -f Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/DependInfo.cmake --color=
Scanning dependencies of target testDescriptors
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 66%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/test.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testDescriptors.dir/test.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/test.cpp
make -f Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build.make Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMolDescriptors
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build.make Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 66%] Building CXX object Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/rdMolDescriptors.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolDescriptors_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMolDescriptors.dir/rdMolDescriptors.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Wrap/rdMolDescriptors.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Wrap/FilterCatalog.cpp:31:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::FilterCatalogEntry::setProp(const string&, T) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 67%] Linking CXX shared module ../../../../rdkit/Chem/rdfragcatalog.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdfragcatalog.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdfragcatalog.so CMakeFiles/rdfragcatalog.dir/rdfragcatalog.cpp.o CMakeFiles/rdfragcatalog.dir/FragCatalog.cpp.o CMakeFiles/rdfragcatalog.dir/FragCatParams.cpp.o CMakeFiles/rdfragcatalog.dir/FragCatGenerator.cpp.o CMakeFiles/rdfragcatalog.dir/FragFPGenerator.cpp.o  ../../../../lib/libRDKitFragCatalog.so.1.2019.09.1 ../../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 67%] Built target rdfragcatalog
make -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/DependInfo.cmake --color=
Scanning dependencies of target testFingerprintGenerators
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 67%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/testFingerprintGenerators.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testFingerprintGenerators.dir/testFingerprintGenerators.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function.hpp:30,
                 from /usr/include/boost/algorithm/string/detail/find_iterator.hpp:18,
                 from /usr/include/boost/algorithm/string/find_iterator.hpp:24,
                 from /usr/include/boost/algorithm/string/iter_find.hpp:27,
                 from /usr/include/boost/algorithm/string/split.hpp:16,
                 from /usr/include/boost/algorithm/string.hpp:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/test.cpp:16:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/algorithm:62,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp:11:
/usr/include/c++/9/bits/stl_algo.h: In function '_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const unsigned int>]':
/usr/include/c++/9/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  112 |     __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last,
      |     ^~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h: In function 'void testAtomPairOutput()':
/usr/include/c++/9/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  161 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
  162 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  161 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
  162 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  161 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
  162 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  161 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
  162 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  161 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
  162 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  161 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
  162 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function.hpp:30,
                 from /usr/include/boost/algorithm/string/detail/find_iterator.hpp:18,
                 from /usr/include/boost/algorithm/string/find_iterator.hpp:24,
                 from /usr/include/boost/algorithm/string/iter_find.hpp:27,
                 from /usr/include/boost/algorithm/string/split.hpp:16,
                 from /usr/include/boost/algorithm/string.hpp:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/test.cpp:16:
/usr/include/c++/9/bits/stl_vector.h: In function 'void testProperties()':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Wrap/rdMolDescriptors.cpp:12:
/<<PKGBUILDDIR>>/Code/Geometry/point.h: In function 'boost::python::list {anonymous}::GetUSRDistributionsFromPoints(boost::python::api::object, boost::python::api::object)':
/<<PKGBUILDDIR>>/Code/Geometry/point.h:85:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
   85 |     x = other.x;
      |         ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:86:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::y' may be used uninitialized in this function [-Wmaybe-uninitialized]
   86 |     y = other.y;
      |         ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:87:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::z' may be used uninitialized in this function [-Wmaybe-uninitialized]
   87 |     z = other.z;
      |         ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h: In function 'boost::python::list {anonymous}::GetUSRDistributions(boost::python::api::object, boost::python::api::object)':
/<<PKGBUILDDIR>>/Code/Geometry/point.h:85:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
   85 |     x = other.x;
      |         ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:86:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::y' may be used uninitialized in this function [-Wmaybe-uninitialized]
   86 |     y = other.y;
      |         ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:87:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::z' may be used uninitialized in this function [-Wmaybe-uninitialized]
   87 |     z = other.z;
      |         ~~~~~~^
[ 68%] Linking CXX shared module ../../../../rdkit/Chem/rdfiltercatalog.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdfiltercatalog.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdfiltercatalog.so CMakeFiles/rdfiltercatalog.dir/rdfiltercatalog.cpp.o CMakeFiles/rdfiltercatalog.dir/FilterCatalog.cpp.o  ../../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
[ 68%] Linking CXX executable testDescriptors
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDescriptors.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testDescriptors.dir/test.cpp.o  -o testDescriptors  ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Built target testDescriptors
make -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/DependInfo.cmake --color=
Scanning dependencies of target testFingerprints
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testFingerprints.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/test1.cpp
[ 68%] Built target rdfiltercatalog
make -f Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/DependInfo.cmake --color=
Scanning dependencies of target fpTestCatch
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/fpTestCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp
In file included from /usr/include/c++/9/set:60,
                 from /<<PKGBUILDDIR>>/Code/Query/SetQuery.h:13,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp:12:
/usr/include/c++/9/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, int>; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, int> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, int> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, int>, std::_Select1st<std::pair<const long long unsigned int, int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, int> >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:26,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp:12:
/usr/include/c++/9/bits/stl_map.h: In function 'void testRDKitFP()':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, int>, std::_Select1st<std::pair<const long long unsigned int, int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, int> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In function 'void testTopologicalTorsionFPOld()':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, int>, std::_Select1st<std::pair<const long long unsigned int, int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, int> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 68%] Linking CXX executable testFingerprintGenerators
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFingerprintGenerators.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testFingerprintGenerators.dir/testFingerprintGenerators.cpp.o  -o testFingerprintGenerators  ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Built target testFingerprintGenerators
make -f Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/DependInfo.cmake --color=
Scanning dependencies of target testMolTransforms
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLTRANSFORMS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testMolTransforms.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/test1.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/test1.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/test1.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/test1.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function 'void test1Canonicalization()':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 68%] Linking CXX executable testMolTransforms
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolTransforms.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMolTransforms.dir/test1.cpp.o  -o testMolTransforms  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Built target testMolTransforms
make -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/DependInfo.cmake --color=
Scanning dependencies of target testMMFFForceFieldHelpersMultiThread
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/testMultiThread.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/testMultiThread.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/testMultiThread.cpp
[ 69%] Linking CXX shared module ../../../../rdkit/Chem/rdMolDescriptors.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolDescriptors.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdMolDescriptors.so CMakeFiles/rdMolDescriptors.dir/rdMolDescriptors.cpp.o  ../../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 69%] Built target rdMolDescriptors
make -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/DependInfo.cmake --color=
Scanning dependencies of target testMMFFForceFieldHelpers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 70%] Building CXX object Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/testMMFFHelpers.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testMMFFForceFieldHelpers.dir/testMMFFHelpers.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/testMMFFHelpers.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:13:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 70%] Linking CXX executable testMMFFForceFieldHelpersMultiThread
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/testMultiThread.cpp.o  -o testMMFFForceFieldHelpersMultiThread  ../../../../lib/libRDKitDistGeomHelpers.so.1.2019.09.1 ../../../../lib/libRDKitDistGeometry.so.1.2019.09.1 ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 70%] Built target testMMFFForceFieldHelpersMultiThread
make -f Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/DependInfo.cmake --color=
Scanning dependencies of target testUFFForceFieldHelpers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 70%] Building CXX object Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/testUFFHelpers.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testUFFForceFieldHelpers.dir/testUFFHelpers.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/testUFFHelpers.cpp
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::RDProps::clearProp(const string&) const':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/testMMFFHelpers.cpp:15:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/testMMFFHelpers.cpp:15:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/testUFFHelpers.cpp:15:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/testUFFHelpers.cpp:15:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 70%] Linking CXX executable testMMFFForceFieldHelpers
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMMFFForceFieldHelpers.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMMFFForceFieldHelpers.dir/testMMFFHelpers.cpp.o  -o testMMFFForceFieldHelpers  ../../../../lib/libRDKitDistGeomHelpers.so.1.2019.09.1 ../../../../lib/libRDKitDistGeometry.so.1.2019.09.1 ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 70%] Built target testMMFFForceFieldHelpers
make -f Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build.make Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/DependInfo.cmake --color=
Scanning dependencies of target testCrystalForceField
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build.make Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 70%] Building CXX object Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/testCrystalFF.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testCrystalForceField.dir/testCrystalFF.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF/testCrystalFF.cpp
[ 71%] Linking CXX executable testFingerprints
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFingerprints.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testFingerprints.dir/test1.cpp.o  -o testFingerprints  ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 71%] Built target testFingerprints
make -f Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/DependInfo.cmake --color=
Scanning dependencies of target testDistGeomHelpers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 71%] Building CXX object Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/testDgeomHelpers.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/c++  -DRDKIT_DISTGEOMHELPERS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testDistGeomHelpers.dir/testDgeomHelpers.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp
[ 71%] Linking CXX executable testUFFForceFieldHelpers
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testUFFForceFieldHelpers.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testUFFForceFieldHelpers.dir/testUFFHelpers.cpp.o  -o testUFFForceFieldHelpers  ../../../../lib/libRDKitDistGeomHelpers.so.1.2019.09.1 ../../../../lib/libRDKitDistGeometry.so.1.2019.09.1 ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 71%] Built target testUFFForceFieldHelpers
make -f Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build.make Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/DependInfo.cmake --color=
Scanning dependencies of target rdDistGeom
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build.make Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 71%] Building CXX object Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/rdDistGeom.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap && /usr/bin/c++  -DBOOST_PYTHON_MAX_ARITY=32 -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdDistGeom_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdDistGeom.dir/rdDistGeom.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp
[ 72%] Linking CXX executable testCrystalForceField
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testCrystalForceField.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testCrystalForceField.dir/testCrystalFF.cpp.o  -o testCrystalForceField  ../../../../lib/libRDKitDistGeomHelpers.so.1.2019.09.1 ../../../../lib/libRDKitDistGeometry.so.1.2019.09.1 ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 72%] Built target testCrystalForceField
make -f Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/DependInfo.cmake --color=
Scanning dependencies of target testMolAlign
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 72%] Building CXX object Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/testMolAlign.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLALIGN_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testMolAlign.dir/testMolAlign.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/testMolAlign.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:15,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Matrix.h:15,
                 from /<<PKGBUILDDIR>>/Code/Numerics/SquareMatrix.h:14,
                 from /<<PKGBUILDDIR>>/Code/Geometry/Transform3D.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/AlignMolecules.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/testMolAlign.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<double, double>}; _Tp = std::pair<double, double>; _Alloc = std::allocator<std::pair<double, double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::pair<double, double> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<double, double>*, std::vector<std::pair<double, double> > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair<double, double>}; _Tp = std::pair<double, double>; _Alloc = std::allocator<std::pair<double, double> >]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, double>*, std::vector<std::pair<double, double> > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 72%] Linking CXX executable fpTestCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_link_script CMakeFiles/fpTestCatch.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/fpTestCatch.dir/catch_tests.cpp.o  -o fpTestCatch  ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 72%] Built target fpTestCatch
make -f Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build.make Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMolAlign
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build.make Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 72%] Building CXX object Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/rdMolAlign.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolAlign_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMolAlign.dir/rdMolAlign.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp
In file included from /usr/include/c++/9/set:60,
                 from /<<PKGBUILDDIR>>/Code/Query/SetQuery.h:13,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:13:
/usr/include/c++/9/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDGeom::Point3D>; _KeyOfValue = std::_Select1st<std::pair<const int, RDGeom::Point3D> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:26,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:13:
/usr/include/c++/9/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](std::map<_Key, _Tp, _Compare, _Alloc>::key_type&&) [with _Key = int; _Tp = RDGeom::Point3D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In function 'void testGithub2246()':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In function 'void testConstrainedEmbedding()':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In function 'void testGithub55()':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/9/map:60,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp:10:
/usr/include/c++/9/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDGeom::Point3D>; _KeyOfValue = std::_Select1st<std::pair<const int, RDGeom::Point3D> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp:17:
/<<PKGBUILDDIR>>/Code/Geometry/point.h: In function 'RDKit::INT_VECT RDKit::EmbedMultipleConfs(RDKit::ROMol&, unsigned int, unsigned int, int, bool, bool, double, bool, unsigned int, double, boost::python::dict&, double, bool, bool, int, bool, bool, bool)':
/<<PKGBUILDDIR>>/Code/Geometry/point.h:85:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
   85 |     x = other.x;
      |         ~~~~~~^
In file included from /usr/include/c++/9/map:61,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp:10:
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In function 'void testGithub568()':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp:17:
/<<PKGBUILDDIR>>/Code/Geometry/point.h: In function 'int RDKit::EmbedMolecule(RDKit::ROMol&, unsigned int, int, bool, bool, double, bool, unsigned int, boost::python::dict&, double, bool, bool, bool, bool, bool)':
/<<PKGBUILDDIR>>/Code/Geometry/point.h:85:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
   85 |     x = other.x;
      |         ~~~~~~^
In file included from /usr/include/c++/9/map:61,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp:10:
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 73%] Linking CXX executable testMolAlign
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolAlign.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMolAlign.dir/testMolAlign.cpp.o  -o testMolAlign  ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDistGeomHelpers.so.1.2019.09.1 ../../../lib/libRDKitDistGeometry.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 73%] Built target testMolAlign
make -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/DependInfo.cmake --color=
Scanning dependencies of target testFeatures
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 73%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/testFeatures.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLCHEMICALFEATURES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testFeatures.dir/testFeatures.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/testFeatures.cpp
/<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp: In function 'RDKit::MolAlign::PyO3A* RDKit::MolAlign::getCrippenO3A(RDKit::ROMol&, RDKit::ROMol&, boost::python::list, boost::python::list, int, int, bool, unsigned int, unsigned int, boost::python::list, boost::python::list)':
/<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp:451:40: warning: comparison of integer expressions of different signedness: 'boost::python::ssize_t' {aka 'int'} and 'unsigned int' [-Wsign-compare]
  451 |       (python::len(prbCrippenContribs) == prbNAtoms)) {
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp:466:40: warning: comparison of integer expressions of different signedness: 'boost::python::ssize_t' {aka 'int'} and 'unsigned int' [-Wsign-compare]
  466 |       (python::len(refCrippenContribs) == refNAtoms)) {
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp: In function 'boost::python::tuple RDKit::MolAlign::getCrippenO3AForConfs(RDKit::ROMol&, RDKit::ROMol&, int, boost::python::list, boost::python::list, int, bool, unsigned int, unsigned int, boost::python::list, boost::python::list)':
/<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp:532:40: warning: comparison of integer expressions of different signedness: 'boost::python::ssize_t' {aka 'int'} and 'unsigned int' [-Wsign-compare]
  532 |       (python::len(prbCrippenContribs) == prbNAtoms)) {
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp:547:40: warning: comparison of integer expressions of different signedness: 'boost::python::ssize_t' {aka 'int'} and 'unsigned int' [-Wsign-compare]
  547 |       (python::len(refCrippenContribs) == refNAtoms)) {
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 73%] Linking CXX shared module ../../../../rdkit/Chem/rdDistGeom.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdDistGeom.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdDistGeom.so CMakeFiles/rdDistGeom.dir/rdDistGeom.cpp.o  ../../../../lib/libRDKitDistGeomHelpers.so.1.2019.09.1 ../../../../lib/libRDKitDistGeometry.so.1.2019.09.1 ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 73%] Built target rdDistGeom
make -f Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/DependInfo.cmake --color=
Scanning dependencies of target testShapeHelpers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 73%] Building CXX object Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/testShapeHelpers.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SHAPEHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testShapeHelpers.dir/testShapeHelpers.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/testShapeHelpers.cpp
[ 73%] Linking CXX executable testDistGeomHelpers
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDistGeomHelpers.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testDistGeomHelpers.dir/testDgeomHelpers.cpp.o  -o testDistGeomHelpers  ../../../lib/libRDKitDistGeomHelpers.so.1.2019.09.1 ../../../lib/libRDKitDistGeometry.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 73%] Built target testDistGeomHelpers
make -f Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/DependInfo.cmake --color=
Scanning dependencies of target testMolCatalog
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 73%] Building CXX object Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testMolCatalog.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/test1.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/testFeatures.cpp:16:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/testFeatures.cpp:16:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp:24:
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h: In function 'RDNumeric::DoubleVector* RDKit::_translateWeights(boost::python::api::object)':
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
   68 |       T res = python::extract<T>(d_seq[which]);
      |         ^~~
/usr/include/c++/9/bits/stl_vector.h: In function 'void test6()':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function 'void testGithub2077()':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 73%] Linking CXX executable testShapeHelpers
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testShapeHelpers.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testShapeHelpers.dir/testShapeHelpers.cpp.o  -o testShapeHelpers  ../../../lib/libRDKitShapeHelpers.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 73%] Built target testShapeHelpers
make -f Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build.make Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMolCatalog
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build.make Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 73%] Building CXX object Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/rdMolCatalog.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolCatalog_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMolCatalog.dir/rdMolCatalog.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/Wrap/rdMolCatalog.cpp
[ 73%] Linking CXX executable testFeatures
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFeatures.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testFeatures.dir/testFeatures.cpp.o  -o testFeatures  ../../../lib/libRDKitMolChemicalFeatures.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 73%] Built target testFeatures
make -f Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FMCS /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/DependInfo.cmake --color=
Scanning dependencies of target FMCS
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 73%] Building CXX object Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/FMCS.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/c++  -DFMCS_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FMCS.dir/FMCS.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/FMCS.cpp
[ 73%] Linking CXX executable testMolCatalog
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolCatalog.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMolCatalog.dir/test1.cpp.o  -o testMolCatalog  ../../../lib/libRDKitMolCatalog.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
[ 73%] Linking CXX shared module ../../../../rdkit/Chem/rdMolAlign.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolAlign.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdMolAlign.so CMakeFiles/rdMolAlign.dir/rdMolAlign.cpp.o  ../../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 73%] Built target testMolCatalog
[ 73%] Building CXX object Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/Seed.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/c++  -DFMCS_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FMCS.dir/Seed.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Seed.cpp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 73%] Built target rdMolAlign
[ 73%] Building CXX object Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/MaximumCommonSubgraph.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/c++  -DFMCS_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FMCS.dir/MaximumCommonSubgraph.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/MaximumCommonSubgraph.cpp
[ 74%] Building CXX object Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/SubstructMatchCustom.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/c++  -DFMCS_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FMCS.dir/SubstructMatchCustom.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/SubstructMatchCustom.cpp
[ 75%] Linking CXX shared module ../../../../rdkit/Chem/rdMolCatalog.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolCatalog.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdMolCatalog.so CMakeFiles/rdMolCatalog.dir/rdMolCatalog.cpp.o  ../../../../lib/libRDKitMolCatalog.so.1.2019.09.1 ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 75%] Built target rdMolCatalog
make -f Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolHash /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/DependInfo.cmake --color=
Scanning dependencies of target MolHash
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 75%] Building CXX object Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/MolHash.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/c++  -DMolHash_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLHASH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolHash.dir/MolHash.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/MolHash.cpp
make -f Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MMPA /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/DependInfo.cmake --color=
Scanning dependencies of target MMPA
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 76%] Building CXX object Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/MMPA.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA && /usr/bin/c++  -DMMPA_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MMPA_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MMPA.dir/MMPA.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MMPA/MMPA.cpp
make -f Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/build.make Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/DependInfo.cmake --color=
Scanning dependencies of target StructChecker
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/build.make Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 76%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/StructChecker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/StructChecker.dir/StructChecker.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/StructChecker.cpp
[ 76%] Linking CXX shared library ../../../lib/libRDKitFMCS.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/cmake -E cmake_link_script CMakeFiles/FMCS.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitFMCS.so.1 -o ../../../lib/libRDKitFMCS.so.1.2019.09.1 CMakeFiles/FMCS.dir/FMCS.cpp.o CMakeFiles/FMCS.dir/Seed.cpp.o CMakeFiles/FMCS.dir/MaximumCommonSubgraph.cpp.o CMakeFiles/FMCS.dir/SubstructMatchCustom.cpp.o  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitFMCS.so.1.2019.09.1 ../../../lib/libRDKitFMCS.so.1 ../../../lib/libRDKitFMCS.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 76%] Built target FMCS
[ 76%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/StructCheckerOptions.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/StructChecker.dir/StructCheckerOptions.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/StructCheckerOptions.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MMPA/MMPA.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 77%] Building CXX object Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/HashToString.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/c++  -DMolHash_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLHASH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolHash.dir/HashToString.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/HashToString.cpp
[ 77%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/StructureFlags.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/StructChecker.dir/StructureFlags.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/StructureFlags.cpp
[ 77%] Linking CXX shared library ../../../lib/libRDKitMMPA.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMPA.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitMMPA.so.1 -o ../../../lib/libRDKitMMPA.so.1.2019.09.1 CMakeFiles/MMPA.dir/MMPA.cpp.o  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMMPA.so.1.2019.09.1 ../../../lib/libRDKitMMPA.so.1 ../../../lib/libRDKitMMPA.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 77%] Built target MMPA
make -f Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/DependInfo.cmake --color=
Scanning dependencies of target trajectoryTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 77%] Building CXX object Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/trajectoryTest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_TRAJECTORY_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/trajectoryTest.dir/trajectoryTest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/trajectoryTest.cpp
[ 77%] Building CXX object Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/hashfunctions.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/c++  -DMolHash_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLHASH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolHash.dir/hashfunctions.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/hashfunctions.cpp
[ 77%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/Utilites.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/StructChecker.dir/Utilites.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/Utilites.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Trajectory.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/trajectoryTest.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In function 'void testAddConformersFromTrajectory()':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 77%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/Pattern.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/StructChecker.dir/Pattern.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/Pattern.cpp
[ 78%] Linking CXX executable trajectoryTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory && /usr/bin/cmake -E cmake_link_script CMakeFiles/trajectoryTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/trajectoryTest.dir/trajectoryTest.cpp.o  -o trajectoryTest  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 78%] Built target trajectoryTest
make -f Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/DependInfo.cmake --color=
Scanning dependencies of target substructLibraryTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 79%] Building CXX object Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/substructLibraryTest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBSTRUCTLIBRARY_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/substructLibraryTest.dir/substructLibraryTest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/substructLibraryTest.cpp
[ 79%] Building CXX object Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/normalize.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/c++  -DMolHash_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLHASH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolHash.dir/normalize.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/normalize.cpp
make -f Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/DependInfo.cmake --color=
Scanning dependencies of target rdSubstructLibrary
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 79%] Building CXX object Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/rdSubstructLibrary.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSubstructLibrary_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdSubstructLibrary.dir/rdSubstructLibrary.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/Wrap/rdSubstructLibrary.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/normalize.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
[ 79%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/Stereo.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/StructChecker.dir/Stereo.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/Stereo.cpp
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::RDProps::clearProp(const string&) const':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 79%] Linking CXX shared library ../../../lib/libRDKitMolHash.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolHash.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitMolHash.so.1 -o ../../../lib/libRDKitMolHash.so.1.2019.09.1 CMakeFiles/MolHash.dir/MolHash.cpp.o CMakeFiles/MolHash.dir/HashToString.cpp.o CMakeFiles/MolHash.dir/hashfunctions.cpp.o CMakeFiles/MolHash.dir/normalize.cpp.o  ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
[ 79%] Building CXX object Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/SubstructLibraryWrap.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSubstructLibrary_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdSubstructLibrary.dir/SubstructLibraryWrap.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/Wrap/SubstructLibraryWrap.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolHash.so.1.2019.09.1 ../../../lib/libRDKitMolHash.so.1 ../../../lib/libRDKitMolHash.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 79%] Built target MolHash
make -f Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/DependInfo.cmake --color=
Scanning dependencies of target RGroupDecomposition
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 79%] Building CXX object Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupDecomp.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_RGROUPDECOMPOSITION_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DRGroupDecomposition_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/RGroupDecomposition.dir/RGroupDecomp.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupDecomp.cpp
[ 79%] Linking CXX executable substructLibraryTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary && /usr/bin/cmake -E cmake_link_script CMakeFiles/substructLibraryTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/substructLibraryTest.dir/substructLibraryTest.cpp.o  -o substructLibraryTest  ../../../lib/libRDKitSubstructLibrary.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 -lboost_serialization ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 79%] Built target substructLibraryTest
make -f Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/DependInfo.cmake --color=
Scanning dependencies of target molInterchangeTest1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 79%] Building CXX object Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLINTERCHANGE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/rapidjson -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/molInterchangeTest1.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/test1.cpp
[ 80%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/AtomSymbolMatch.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/StructChecker.dir/AtomSymbolMatch.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/AtomSymbolMatch.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/../RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupDecomp.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupDecomp.cpp:31:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/test1.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 80%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/StripSmallFragments.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/StructChecker.dir/StripSmallFragments.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/StripSmallFragments.cpp
[ 80%] Linking CXX executable molInterchangeTest1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange && /usr/bin/cmake -E cmake_link_script CMakeFiles/molInterchangeTest1.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/molInterchangeTest1.dir/test1.cpp.o  -o molInterchangeTest1  ../../../lib/libRDKitMolInterchange.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 80%] Built target molInterchangeTest1
[ 80%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/ReCharge.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/StructChecker.dir/ReCharge.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/ReCharge.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/../MolOps.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/StripSmallFragments.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 80%] Linking CXX shared library ../../../lib/libRDKitRGroupDecomposition.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/cmake -E cmake_link_script CMakeFiles/RGroupDecomposition.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitRGroupDecomposition.so.1 -o ../../../lib/libRDKitRGroupDecomposition.so.1.2019.09.1 CMakeFiles/RGroupDecomposition.dir/RGroupDecomp.cpp.o  ../../../lib/libRDKitFMCS.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitRGroupDecomposition.so.1.2019.09.1 ../../../lib/libRDKitRGroupDecomposition.so.1 ../../../lib/libRDKitRGroupDecomposition.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 80%] Built target RGroupDecomposition
make -f Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/DependInfo.cmake --color=
Scanning dependencies of target rdmolfiles
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 80%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/rdmolfiles.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdmolfiles.dir/rdmolfiles.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/rdmolfiles.cpp
[ 80%] Linking CXX shared module ../../../../rdkit/Chem/rdSubstructLibrary.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdSubstructLibrary.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdSubstructLibrary.so CMakeFiles/rdSubstructLibrary.dir/rdSubstructLibrary.cpp.o CMakeFiles/rdSubstructLibrary.dir/SubstructLibraryWrap.cpp.o  ../../../../lib/libRDKitSubstructLibrary.so.1.2019.09.1 ../../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
[ 80%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/ForwardSDMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdmolfiles.dir/ForwardSDMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/ForwardSDMolSupplier.cpp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 80%] Built target rdSubstructLibrary
[ 80%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/Tautomer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/StructChecker.dir/Tautomer.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/Tautomer.cpp
make -f Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/DependInfo.cmake --color=
Scanning dependencies of target ChemReactions
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 81%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/Reaction.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ChemReactions.dir/Reaction.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.cpp
[ 81%] Linking CXX shared library ../../../lib/libRDKitStructChecker.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/cmake -E cmake_link_script CMakeFiles/StructChecker.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitStructChecker.so.1 -o ../../../lib/libRDKitStructChecker.so.1.2019.09.1 CMakeFiles/StructChecker.dir/StructChecker.cpp.o CMakeFiles/StructChecker.dir/StructCheckerOptions.cpp.o CMakeFiles/StructChecker.dir/StructureFlags.cpp.o CMakeFiles/StructChecker.dir/Utilites.cpp.o CMakeFiles/StructChecker.dir/Pattern.cpp.o CMakeFiles/StructChecker.dir/Stereo.cpp.o CMakeFiles/StructChecker.dir/AtomSymbolMatch.cpp.o CMakeFiles/StructChecker.dir/StripSmallFragments.cpp.o CMakeFiles/StructChecker.dir/ReCharge.cpp.o CMakeFiles/StructChecker.dir/Tautomer.cpp.o  ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitStructChecker.so.1.2019.09.1 ../../../lib/libRDKitStructChecker.so.1 ../../../lib/libRDKitStructChecker.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 81%] Built target StructChecker
[ 81%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/MaeMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdmolfiles.dir/MaeMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MaeMolSupplier.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h:37,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.cpp:33:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/ForwardSDMolSupplier.cpp:22:
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:186:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |       off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                        ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:156:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |         off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                          ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:379:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  379 |       result = off_type(bp::extract<off_type>(py_tell()));
      |                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 81%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/MDLParser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ChemReactions.dir/MDLParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/MDLParser.cpp
make -f Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FMCS /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/DependInfo.cmake --color=
Scanning dependencies of target testFMCS
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 81%] Building CXX object Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/testFMCS_Unit.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testFMCS.dir/testFMCS_Unit.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/testFMCS_Unit.cpp
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MaeMolSupplier.cpp:21:
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:186:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |       off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                        ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:156:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |         off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                          ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:379:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  379 |       result = off_type(bp::extract<off_type>(py_tell()));
      |                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/testFMCS_Unit.cpp:48:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 81%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SDMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdmolfiles.dir/SDMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SDMolSupplier.cpp
[ 81%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/DaylightParser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ChemReactions.dir/DaylightParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/DaylightParser.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/rdmolfiles.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 81%] Linking CXX executable testFMCS
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFMCS.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testFMCS.dir/testFMCS_Unit.cpp.o  -o testFMCS  ../../../lib/libRDKitFMCS.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 81%] Built target testFMCS
make -f Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build.make Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/DependInfo.cmake --color=
Scanning dependencies of target rdFMCS
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build.make Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 81%] Building CXX object Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/rdFMCS.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdFMCS_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdFMCS.dir/rdFMCS.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Wrap/rdFMCS.cpp
[ 81%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionPickler.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ChemReactions.dir/ReactionPickler.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionPickler.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SDMolSupplier.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In function 'void RDKit::setStreamIndices(RDKit::SDMolSupplier&, boost::python::api::object)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
make -f Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/build.make Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/DependInfo.cmake --color=
Scanning dependencies of target FMCStest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/build.make Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 81%] Building CXX object Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/testFMCS.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/FMCStest.dir/testFMCS.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp
[ 81%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/TDTMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdmolfiles.dir/TDTMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/TDTMolSupplier.cpp
/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp: In function 'std::string testChEMBL_Txt(const char*, double, const char*)':
/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp:501:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type' {aka 'unsigned int'} [-Wformat=]
  501 |   fprintf(fres, "%s;%lu;%.1f;%.4f;%u;%u;%s;", test, mols.size(), th, sec,
      |                     ~~^                             ~~~~~~~~~~~
      |                       |                                      |
      |                       long unsigned int                      std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type {aka unsigned int}
      |                     %u
/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp: In function 'void testFileSDF_RandomSet_SMI(const char*, const char*)':
/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp:1173:27: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type' {aka 'unsigned int'} [-Wformat=]
 1173 |       fprintf(fcsv, "%u;%lu;%s;%.3f;%u;%u;%s;", n, mols.size(),
      |                         ~~^                        ~~~~~~~~~~~
      |                           |                                 |
      |                           long unsigned int                 std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type {aka unsigned int}
      |                         %u
/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp:1185:27: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type' {aka 'unsigned int'} [-Wformat=]
 1185 |       fprintf(fcsv, "%u;%lu;%s;%.3f;%u;%u;%s\n", n, mols.size(),
      |                         ~~^                         ~~~~~~~~~~~
      |                           |                                  |
      |                           long unsigned int                  std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type {aka unsigned int}
      |                         %u
/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp: In function 'void testFileSDF_RandomSet(const char*, const char*)':
/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp:1287:29: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type' {aka 'unsigned int'} [-Wformat=]
 1287 |         fprintf(fcsv, "%u;%lu;%s;%.5f;%u;%u;%s;", n, mols.size(),
      |                           ~~^                        ~~~~~~~~~~~
      |                             |                                 |
      |                             long unsigned int                 std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type {aka unsigned int}
      |                           %u
/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp:1336:27: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type' {aka 'unsigned int'} [-Wformat=]
 1336 |       fprintf(fcsv, "%u;%lu;%s;%.5f;%u;%u;%s;", n, mols.size(),
      |                         ~~^                        ~~~~~~~~~~~
      |                           |                                 |
      |                           long unsigned int                 std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type {aka unsigned int}
      |                         %u
/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp:1416:29: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type' {aka 'unsigned int'} [-Wformat=]
 1416 |         fprintf(fcsv, "%u;%lu;%s;%.5f;%u;%u;%s;", n, mols.size(),
      |                           ~~^                        ~~~~~~~~~~~
      |                             |                                 |
      |                             long unsigned int                 std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type {aka unsigned int}
      |                           %u
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/../../RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp:48:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
[ 81%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ChemReactions.dir/ReactionWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionWriter.cpp
/usr/include/c++/9/bits/vector.tcc: In function 'void test504()':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 81%] Linking CXX shared module ../../../../rdkit/Chem/rdFMCS.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdFMCS.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdFMCS.so CMakeFiles/rdFMCS.dir/rdFMCS.cpp.o  ../../../../lib/libRDKitFMCS.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 81%] Built target rdFMCS
make -f Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/build.make Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolHash /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/DependInfo.cmake --color=
Scanning dependencies of target molHashCatchTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/build.make Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 81%] Building CXX object Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLHASH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/molHashCatchTest.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/catch_tests.cpp
[ 81%] Linking CXX executable FMCStest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test && /usr/bin/cmake -E cmake_link_script CMakeFiles/FMCStest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/FMCStest.dir/testFMCS.cpp.o  -o FMCStest  ../../../../lib/libRDKitFMCS.so.1.2019.09.1 ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 81%] Built target FMCStest
make -f Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolHash /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/DependInfo.cmake --color=
Scanning dependencies of target testMolHash
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 81%] Building CXX object Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/testMolHash.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLHASH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testMolHash.dir/testMolHash.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/testMolHash.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h:37,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionWriter.cpp:33:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In function 'void {anonymous}::setRXNRoleOfAllMoleculeAtoms(RDKit::ROMol&, int)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 81%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SmilesMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdmolfiles.dir/SmilesMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SmilesMolSupplier.cpp
[ 81%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionDepict.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ChemReactions.dir/ReactionDepict.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionDepict.cpp
[ 82%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionFingerprints.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ChemReactions.dir/ReactionFingerprints.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionFingerprints.cpp
[ 82%] Linking CXX executable testMolHash
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolHash.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMolHash.dir/testMolHash.cpp.o  -o testMolHash  ../../../lib/libRDKitMolHash.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 82%] Built target testMolHash
[ 83%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SmilesWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdmolfiles.dir/SmilesWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SmilesWriter.cpp
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionFingerprints.cpp: In function 'RDKit::SparseIntVect<unsigned int>* RDKit::DifferenceFingerprintChemReaction(const RDKit::ChemicalReaction&, const RDKit::ReactionFingerprintParams&)':
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionFingerprints.cpp:221:42: warning: implicitly-declared 'RDKit::SparseIntVect<unsigned int>& RDKit::SparseIntVect<unsigned int>::operator=(const RDKit::SparseIntVect<unsigned int>&)' is deprecated [-Wdeprecated-copy]
  221 |     (*res) = *productFP - *reactantFP + *agentFP;
      |                                          ^~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionFingerprints.cpp:37:
/<<PKGBUILDDIR>>/Code/DataStructs/SparseIntVect.h:38:3: note: because 'RDKit::SparseIntVect<unsigned int>' has user-provided 'RDKit::SparseIntVect<IndexType>::SparseIntVect(const RDKit::SparseIntVect<IndexType>&) [with IndexType = unsigned int]'
   38 |   SparseIntVect(const SparseIntVect<IndexType> &other) {
      |   ^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionFingerprints.cpp:226:28: warning: implicitly-declared 'RDKit::SparseIntVect<unsigned int>& RDKit::SparseIntVect<unsigned int>::operator=(const RDKit::SparseIntVect<unsigned int>&)' is deprecated [-Wdeprecated-copy]
  226 |     (*res) = *productFP - *reactantFP;
      |                            ^~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionFingerprints.cpp:37:
/<<PKGBUILDDIR>>/Code/DataStructs/SparseIntVect.h:38:3: note: because 'RDKit::SparseIntVect<unsigned int>' has user-provided 'RDKit::SparseIntVect<IndexType>::SparseIntVect(const RDKit::SparseIntVect<IndexType>&) [with IndexType = unsigned int]'
   38 |   SparseIntVect(const SparseIntVect<IndexType> &other) {
      |   ^~~~~~~~~~~~~
[ 83%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ChemReactions.dir/ReactionUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionUtils.cpp
make -f Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build.make Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMolHash
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build.make Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 83%] Building CXX object Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/rdMolHash.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolHash_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMolHash.dir/rdMolHash.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/Wrap/rdMolHash.cpp
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SmilesWriter.cpp:20:
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:186:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |       off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                        ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:156:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |         off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                          ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:379:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  379 |       result = off_type(bp::extract<off_type>(py_tell()));
      |                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h:37,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionUtils.cpp:34:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 83%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SDWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdmolfiles.dir/SDWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SDWriter.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/catch_tests.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
[ 83%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/MoleculeParser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ChemReactions.dir/MoleculeParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/MoleculeParser.cpp
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/catch_tests.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 83%] Linking CXX shared module ../../../../rdkit/Chem/rdMolHash.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolHash.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdMolHash.so CMakeFiles/rdMolHash.dir/rdMolHash.cpp.o  ../../../../lib/libRDKitMolHash.so.1.2019.09.1 ../../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 83%] Built target rdMolHash
make -f Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MMPA /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/DependInfo.cmake --color=
Scanning dependencies of target testMMPA
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 83%] Building CXX object Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/MMPA_UnitTest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MMPA_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testMMPA.dir/MMPA_UnitTest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MMPA/MMPA_UnitTest.cpp
[ 83%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionRunner.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ChemReactions.dir/ReactionRunner.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionRunner.cpp
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SDWriter.cpp:21:
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:186:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |       off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                        ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:156:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |         off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                          ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:379:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  379 |       result = off_type(bp::extract<off_type>(py_tell()));
      |                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 83%] Linking CXX executable testMMPA
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMMPA.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMMPA.dir/MMPA_UnitTest.cpp.o  -o testMMPA  ../../../lib/libRDKitMMPA.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 83%] Built target testMMPA
make -f Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build.make Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MMPA/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMMPA
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build.make Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 83%] Building CXX object Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/rdMMPA.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMMPA_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMMPA.dir/rdMMPA.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MMPA/Wrap/rdMMPA.cpp
[ 83%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/TDTWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdmolfiles.dir/TDTWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/TDTWriter.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h:37,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionRunner.cpp:33:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h:37,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionRunner.cpp:33:
/usr/include/c++/9/bits/stl_vector.h: In function 'void RDKit::ReactionRunnerUtils::generateProductConformers(RDKit::Conformer*, const RDKit::ROMol&, RDKit::ReactionRunnerUtils::ReactantProductAtomMapping*)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h:37,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionRunner.cpp:33:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 84%] Linking CXX shared module ../../../../rdkit/Chem/rdMMPA.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMMPA.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdMMPA.so CMakeFiles/rdMMPA.dir/rdMMPA.cpp.o  ../../../../lib/libRDKitMMPA.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 84%] Built target rdMMPA
make -f Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/build.make Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/DependInfo.cmake --color=
Scanning dependencies of target testStructChecker
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/build.make Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 84%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/testStructChecker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testStructChecker.dir/testStructChecker.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/testStructChecker.cpp
[ 84%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/PreprocessRxn.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ChemReactions.dir/PreprocessRxn.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/PreprocessRxn.cpp
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/TDTWriter.cpp:21:
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:186:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |       off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                        ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:156:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |         off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                          ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:379:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  379 |       result = off_type(bp::extract<off_type>(py_tell()));
      |                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 84%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/PDBWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdmolfiles.dir/PDBWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/PDBWriter.cpp
[ 84%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/SanitizeRxn.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ChemReactions.dir/SanitizeRxn.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/SanitizeRxn.cpp
[ 84%] Linking CXX executable testStructChecker
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/cmake -E cmake_link_script CMakeFiles/testStructChecker.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testStructChecker.dir/testStructChecker.cpp.o  -o testStructChecker  ../../../lib/libRDKitStructChecker.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 84%] Built target testStructChecker
make -f Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/build.make Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/DependInfo.cmake --color=
Scanning dependencies of target rdStructChecker
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/build.make Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 84%] Building CXX object Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/structchecker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdStructChecker_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdStructChecker.dir/structchecker.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/Wrap/structchecker.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h:37,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/SanitizeRxn.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/SanitizeRxn.cpp:32:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/PDBWriter.cpp:20:
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:186:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |       off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                        ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:156:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |         off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                          ^
[ 84%] Linking CXX executable molHashCatchTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/cmake -E cmake_link_script CMakeFiles/molHashCatchTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/molHashCatchTest.dir/catch_tests.cpp.o  -o molHashCatchTest  ../../../lib/libRDKitMolHash.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:379:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  379 |       result = off_type(bp::extract<off_type>(py_tell()));
      |                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 84%] Built target molHashCatchTest
make -f Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/DependInfo.cmake --color=
Scanning dependencies of target testRGroupDecomp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 84%] Building CXX object Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/testRGroupDecomp.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_RGROUPDECOMPOSITION_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testRGroupDecomp.dir/testRGroupDecomp.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/testRGroupDecomp.cpp
[ 84%] Linking CXX shared module ../../../rdkit/Chem/rdmolfiles.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdmolfiles.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/Chem/rdmolfiles.so CMakeFiles/rdmolfiles.dir/rdmolfiles.cpp.o CMakeFiles/rdmolfiles.dir/ForwardSDMolSupplier.cpp.o CMakeFiles/rdmolfiles.dir/MaeMolSupplier.cpp.o CMakeFiles/rdmolfiles.dir/SDMolSupplier.cpp.o CMakeFiles/rdmolfiles.dir/TDTMolSupplier.cpp.o CMakeFiles/rdmolfiles.dir/SmilesMolSupplier.cpp.o CMakeFiles/rdmolfiles.dir/SmilesWriter.cpp.o CMakeFiles/rdmolfiles.dir/SDWriter.cpp.o CMakeFiles/rdmolfiles.dir/TDTWriter.cpp.o CMakeFiles/rdmolfiles.dir/PDBWriter.cpp.o  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 84%] Built target rdmolfiles
make -f Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/DependInfo.cmake --color=
Scanning dependencies of target rdRGroupDecomposition
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 84%] Building CXX object Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/rdRGroupComposition.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdRGroupDecomposition_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdRGroupDecomposition.dir/rdRGroupComposition.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/Wrap/rdRGroupComposition.cpp
[ 84%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/Enumerate/Enumerate.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ChemReactions.dir/Enumerate/Enumerate.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/Enumerate.cpp
[ 85%] Linking CXX shared module ../../../../rdkit/Chem/rdStructChecker.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdStructChecker.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdStructChecker.so CMakeFiles/rdStructChecker.dir/structchecker.cpp.o  ../../../../lib/libRDKitStructChecker.so.1.2019.09.1 ../../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 85%] Built target rdStructChecker
[ 86%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/Enumerate/EnumerationPickler.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ChemReactions.dir/Enumerate/EnumerationPickler.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/EnumerationPickler.cpp
[ 86%] Linking CXX executable testRGroupDecomp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/cmake -E cmake_link_script CMakeFiles/testRGroupDecomp.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testRGroupDecomp.dir/testRGroupDecomp.cpp.o  -o testRGroupDecomp  ../../../lib/libRDKitRGroupDecomposition.so.1.2019.09.1 ../../../lib/libRDKitFMCS.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 86%] Built target testRGroupDecomp
[ 86%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/Enumerate/EvenSamplePairs.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ChemReactions.dir/Enumerate/EvenSamplePairs.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/EvenSamplePairs.cpp
[ 87%] Linking CXX shared module ../../../../rdkit/Chem/rdRGroupDecomposition.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdRGroupDecomposition.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdRGroupDecomposition.so CMakeFiles/rdRGroupDecomposition.dir/rdRGroupComposition.cpp.o  ../../../../lib/libRDKitRGroupDecomposition.so.1.2019.09.1 ../../../../lib/libRDKitFMCS.so.1.2019.09.1 ../../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 87%] Built target rdRGroupDecomposition
[ 87%] Linking CXX shared library ../../../lib/libRDKitChemReactions.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_link_script CMakeFiles/ChemReactions.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitChemReactions.so.1 -o ../../../lib/libRDKitChemReactions.so.1.2019.09.1 CMakeFiles/ChemReactions.dir/Reaction.cpp.o CMakeFiles/ChemReactions.dir/MDLParser.cpp.o CMakeFiles/ChemReactions.dir/DaylightParser.cpp.o CMakeFiles/ChemReactions.dir/ReactionPickler.cpp.o CMakeFiles/ChemReactions.dir/ReactionWriter.cpp.o CMakeFiles/ChemReactions.dir/ReactionDepict.cpp.o CMakeFiles/ChemReactions.dir/ReactionFingerprints.cpp.o CMakeFiles/ChemReactions.dir/ReactionUtils.cpp.o CMakeFiles/ChemReactions.dir/MoleculeParser.cpp.o CMakeFiles/ChemReactions.dir/ReactionRunner.cpp.o CMakeFiles/ChemReactions.dir/PreprocessRxn.cpp.o CMakeFiles/ChemReactions.dir/SanitizeRxn.cpp.o CMakeFiles/ChemReactions.dir/Enumerate/Enumerate.cpp.o CMakeFiles/ChemReactions.dir/Enumerate/EnumerationPickler.cpp.o CMakeFiles/ChemReactions.dir/Enumerate/EvenSamplePairs.cpp.o  ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 -lboost_serialization ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../lib/libRDKitChemReactions.so.1 ../../../lib/libRDKitChemReactions.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 87%] Built target ChemReactions
make -f Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/depend
make -f Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/DependInfo.cmake --color=
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/DependInfo.cmake --color=
make -f Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/DependInfo.cmake --color=
Scanning dependencies of target testReaction
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Scanning dependencies of target testReactionFingerprints
Scanning dependencies of target testEnumeration
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/build
Scanning dependencies of target rxnTestCatch
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 87%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/testReaction.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testReaction.dir/testReaction.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/testReaction.cpp
[ 87%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/testReactionFingerprints.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testReactionFingerprints.dir/testReactionFingerprints.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/testReactionFingerprints.cpp
[ 88%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/rxnTestCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/catch_tests.cpp
[ 88%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/Enumerate/testEnumerate.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testEnumeration.dir/Enumerate/testEnumerate.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/testEnumerate.cpp
[ 88%] Linking CXX executable testReactionFingerprints
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_link_script CMakeFiles/testReactionFingerprints.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testReactionFingerprints.dir/testReactionFingerprints.cpp.o  -o testReactionFingerprints  ../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 -lboost_serialization ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 -lboost_serialization ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 88%] Built target testReactionFingerprints
make -f Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build.make Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/DependInfo.cmake --color=
Scanning dependencies of target rdChemReactions
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build.make Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 88%] Building CXX object Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/Enumerate.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdChemReactions_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdChemReactions.dir/Enumerate.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp
[ 88%] Linking CXX executable testEnumeration
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_link_script CMakeFiles/testEnumeration.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testEnumeration.dir/Enumerate/testEnumerate.cpp.o  -o testEnumeration  ../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 -lboost_serialization ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 -lboost_serialization ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 88%] Built target testEnumeration
make -f Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DependInfo.cmake --color=
Scanning dependencies of target MolDraw2D
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 89%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2D.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++  -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolDraw2D.dir/MolDraw2D.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/testReaction.cpp:34:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/testReaction.cpp:34:
/usr/include/c++/9/bits/stl_vector.h: In member function 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/testReaction.cpp:34:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp: In member function 'virtual void RDKit::MolDraw2D::drawBond(const RDKit::ROMol&, const RDKit::Bond*, int, int, const std::vector<int>*, const std::map<int, RDKit::DrawColour>*, const std::vector<int>*, const std::map<int, RDKit::DrawColour>*)':
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:1290:19: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
 1290 |       if (at1_idx == bond->getBeginAtomIdx()) {
      |           ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/catch_tests.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/catch_tests.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:14:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:14:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:14:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDGeom::Point2D&}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point2D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:14:
/usr/include/c++/9/bits/stl_vector.h: In member function 'void RDKit::MolDraw2D::extractAtomCoords(const RDKit::ROMol&, int, bool)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/set:60,
                 from /<<PKGBUILDDIR>>/Code/Query/SetQuery.h:13,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:14:
/usr/include/c++/9/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = int; _Val = std::pair<const int, RDKit::DrawColour>; _KeyOfValue = std::_Select1st<std::pair<const int, RDKit::DrawColour> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
 2187 |     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDKit::DrawColour>; _KeyOfValue = std::_Select1st<std::pair<const int, RDKit::DrawColour> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const int&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDKit::DrawColour>; _KeyOfValue = std::_Select1st<std::pair<const int, RDKit::DrawColour> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:26,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:14:
/usr/include/c++/9/bits/stl_map.h: In member function 'RDKit::DrawColour RDKit::MolDraw2D::getColourByAtomicNum(int)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:14:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void RDKit::MolDraw2D::drawReaction(const RDKit::ChemicalReaction&, bool, const std::vector<RDKit::DrawColour>*, const std::vector<int>*)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:26,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:14:
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/9/bits/stl_vector.h: In function 'void boost::python::container_utils::extend_container(Container&, boost::python::api::object) [with Container = std::vector<long long unsigned int>]':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In static member function 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_append(Container&, boost::python::api::object) [with Container = std::vector<long long unsigned int>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>]':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 89%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2DSVG.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++  -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolDraw2D.dir/MolDraw2DSVG.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DSVG.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/9/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/9/bits/vector.tcc:184:5: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
  184 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:184:5: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/9/bits/stl_vector.h: In static member function 'static void boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_delete_item(Container&, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>; bool NoProxy = false; bool NoSlice = false; Data = long long unsigned int; Index = unsigned int; Key = long long unsigned int]':
/usr/include/c++/9/bits/stl_vector.h:1458:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1458 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |                                                                       ^
In file included from /usr/include/c++/9/algorithm:62,
                 from /usr/include/boost/function/detail/prologue.hpp:13,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/9/bits/stl_algo.h: In function '_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const long long unsigned int>]':
/usr/include/c++/9/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  112 |     __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last,
      |     ^~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h: In static member function 'static bool boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_contains(Container&, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>; bool NoProxy = false; bool NoSlice = false; Data = long long unsigned int; Index = unsigned int; Key = long long unsigned int]':
/usr/include/c++/9/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  161 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
  162 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  161 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
  162 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
  721 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/9/bits/stl_vector.h: In static member function 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_extend(Container&, boost::python::api::object) [with Container = std::vector<long long unsigned int>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>]':
/usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
 1662 |    _M_range_insert(__pos, __first, __last,
      |    ^~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_vector.h: In static member function 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<long long unsigned int>, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>, boost::python::detail::container_element<std::vector<long long unsigned int>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false> >, unsigned int>; Data = long long unsigned int; Index = unsigned int]':
/usr/include/c++/9/bits/stl_vector.h:1458:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1458 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |                                                                       ^
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/9/bits/vector.tcc:161:2: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  161 |  _M_realloc_insert(begin() + (__position - cbegin()), __x);
      |  ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/9/bits/stl_vector.h:1458:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1458 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |                                                                       ^
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/9/bits/vector.tcc:161:2: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  161 |  _M_realloc_insert(begin() + (__position - cbegin()), __x);
      |  ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
 1662 |    _M_range_insert(__pos, __first, __last,
      |    ^~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_vector.h:1458:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1458 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |                                                                       ^
/usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
 1662 |    _M_range_insert(__pos, __first, __last,
      |    ^~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
In file included from /usr/include/boost/python/suite/indexing/indexing_suite.hpp:12,
                 from /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:9,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:24,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:32:
/usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:689:9: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
  689 |         }
      |         ^
/usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:689:9: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
/usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:689:9: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
/usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:689:9: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
[ 89%] Building CXX object Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/rdChemReactions.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdChemReactions_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdChemReactions.dir/rdChemReactions.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp
[ 89%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2DDetails.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++  -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolDraw2D.dir/MolDraw2DDetails.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DDetails.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DDetails.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DDetails.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDGeom::Point2D&}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point2D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DDetails.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DDetails.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In function 'void RDKit::MolDraw2D_detail::arcPoints(const RDGeom::Point2D&, const RDGeom::Point2D&, std::vector<RDGeom::Point2D>&, float, float)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 89%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2DUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++  -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolDraw2D.dir/MolDraw2DUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DUtils.cpp
[ 89%] Linking CXX executable rxnTestCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_link_script CMakeFiles/rxnTestCatch.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/rxnTestCatch.dir/catch_tests.cpp.o  -o rxnTestCatch  ../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 -lboost_serialization ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 -lboost_serialization ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 89%] Built target rxnTestCatch
make -f Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/DependInfo.cmake --color=
Scanning dependencies of target MolStandardize
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 90%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/MolStandardize.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/MolStandardize.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/MolStandardize.cpp
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/testReaction.cpp:34:
/usr/include/c++/9/bits/stl_vector.h: In function 'void test25Conformers()':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 90%] Linking CXX shared library ../../../lib/libRDKitMolDraw2D.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolDraw2D.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitMolDraw2D.so.1 -o ../../../lib/libRDKitMolDraw2D.so.1.2019.09.1 CMakeFiles/MolDraw2D.dir/MolDraw2D.cpp.o CMakeFiles/MolDraw2D.dir/MolDraw2DSVG.cpp.o CMakeFiles/MolDraw2D.dir/MolDraw2DDetails.cpp.o CMakeFiles/MolDraw2D.dir/MolDraw2DUtils.cpp.o  ../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lboost_serialization 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolDraw2D.so.1.2019.09.1 ../../../lib/libRDKitMolDraw2D.so.1 ../../../lib/libRDKitMolDraw2D.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 90%] Built target MolDraw2D
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/DependInfo.cmake --color=
Scanning dependencies of target moldraw2DRxnTest1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 90%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/rxn_test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/moldraw2DRxnTest1.dir/rxn_test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/rxn_test1.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp:32:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 90%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Metal.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/Metal.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Metal.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/rxn_test1.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::DrawColour>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:60,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/rxn_test1.cpp:12:
/usr/include/c++/9/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDKit::DrawColour>; _KeyOfValue = std::_Select1st<std::pair<const int, RDKit::DrawColour> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/rxn_test1.cpp:12:
/usr/include/c++/9/bits/stl_map.h: In function 'void {anonymous}::drawit(RDKit::ChemicalReaction*, std::string, bool, const std::vector<RDKit::DrawColour>*)':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 90%] Linking CXX executable moldraw2DRxnTest1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/cmake -E cmake_link_script CMakeFiles/moldraw2DRxnTest1.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/moldraw2DRxnTest1.dir/rxn_test1.cpp.o  -o moldraw2DRxnTest1  ../../../lib/libRDKitMolDraw2D.so.1.2019.09.1 ../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 -lboost_serialization ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 90%] Built target moldraw2DRxnTest1
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/DependInfo.cmake --color=
Scanning dependencies of target moldraw2DTestCatch
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 90%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/moldraw2DTestCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/catch_tests.cpp
[ 90%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Normalize.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/Normalize.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Normalize.cpp
[ 90%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Validate.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/Validate.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Validate.cpp
[ 90%] Linking CXX shared module ../../../../rdkit/Chem/rdChemReactions.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdChemReactions.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdChemReactions.so CMakeFiles/rdChemReactions.dir/Enumerate.cpp.o CMakeFiles/rdChemReactions.dir/rdChemReactions.cpp.o  ../../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 90%] Built target rdChemReactions
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/DependInfo.cmake --color=
Scanning dependencies of target moldraw2DTest1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 91%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/moldraw2DTest1.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/test1.cpp
[ 92%] Linking CXX executable testReaction
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_link_script CMakeFiles/testReaction.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testReaction.dir/testReaction.cpp.o  -o testReaction  ../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 -lboost_serialization ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 -lboost_serialization ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 92%] Built target testReaction
make -f Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMolDraw2D
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 92%] Building CXX object Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/rdMolDraw2D.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolDraw2D_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMolDraw2D.dir/rdMolDraw2D.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp
[ 92%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Charge.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/Charge.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Charge.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/catch_tests.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/catch_tests.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/test1.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::DrawColour>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:60,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/test1.cpp:12:
/usr/include/c++/9/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDKit::DrawColour>; _KeyOfValue = std::_Select1st<std::pair<const int, RDKit::DrawColour> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/test1.cpp:12:
/usr/include/c++/9/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](std::map<_Key, _Tp, _Compare, _Alloc>::key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In constructor 'RDKit::MolDrawOptions::MolDrawOptions()':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/9/map:60,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/test1.cpp:12:
/usr/include/c++/9/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, double> >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/test1.cpp:12:
/usr/include/c++/9/bits/stl_map.h: In function 'void test3()':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, double> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, double> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/catch_tests.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::DrawColour>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp: In function 'void RDKit::contourAndDrawGridHelper(RDKit::MolDraw2D&, boost::python::api::object&, boost::python::api::object&, boost::python::api::object&, unsigned int, boost::python::api::object&, const RDKit::MolDraw2DUtils::ContourParams&)':
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:405:31: warning: comparison of integer expressions of different signedness: 'npy_intp' {aka 'int'} and 'std::vector<double>::size_type' {aka 'unsigned int'} [-Wsign-compare]
  405 |   if (PyArray_DIM(dataArr, 0) != xcoords->size()) {
      |       ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:411:31: warning: comparison of integer expressions of different signedness: 'npy_intp' {aka 'int'} and 'std::vector<double>::size_type' {aka 'unsigned int'} [-Wsign-compare]
  411 |   if (PyArray_DIM(dataArr, 1) != ycoords->size()) {
      |       ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/test1.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In function 'void testGithub1322()':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/test1.cpp:12:
/usr/include/c++/9/bits/stl_map.h: In function 'void test14BWPalette()':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 92%] Linking CXX executable moldraw2DTest1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/cmake -E cmake_link_script CMakeFiles/moldraw2DTest1.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/moldraw2DTest1.dir/test1.cpp.o  -o moldraw2DTest1  ../../../lib/libRDKitMolDraw2D.so.1.2019.09.1 ../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 -lboost_serialization ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
[ 92%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Tautomer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/Tautomer.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Tautomer.cpp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 92%] Built target moldraw2DTest1
make -f Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/DependInfo.cmake --color=
Scanning dependencies of target rdmolops
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 92%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/rdmolops.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolops_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdmolops.dir/rdmolops.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/rdmolops.cpp
In file included from /usr/include/c++/9/map:60,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:4245,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/catch_tests.cpp:12:
/usr/include/c++/9/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDKit::DrawColour>; _KeyOfValue = std::_Select1st<std::pair<const int, RDKit::DrawColour> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:4245,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/catch_tests.cpp:12:
/usr/include/c++/9/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](std::map<_Key, _Tp, _Compare, _Alloc>::key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In constructor 'RDKit::MolDrawOptions::MolDrawOptions()':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::DrawColour>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDGeom::Point2D&}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point2D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:17:
/<<PKGBUILDDIR>>/Code/Geometry/point.h: In function 'std::unique_ptr<std::vector<T> > pythonObjectToVect(const boost::python::api::object&) [with T = RDGeom::Point2D]':
/<<PKGBUILDDIR>>/Code/Geometry/point.h:266:57: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point2D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
  266 |   Point2D(const Point2D &other) : Point(other), x(other.x), y(other.y) {}
      |                                                   ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:266:69: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point2D::y' may be used uninitialized in this function [-Wmaybe-uninitialized]
  266 |   Point2D(const Point2D &other) : Point(other), x(other.x), y(other.y) {}
      |                                                               ~~~~~~^
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:11:
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:14:
/<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h: In function 'std::unique_ptr<std::vector<T> > pythonObjectToVect(const boost::python::api::object&) [with T = double]':
/<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:116:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  116 |       T v = python::extract<T>(obj[i]);
      |         ^
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:11:
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:60,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:11:
/usr/include/c++/9/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDKit::DrawColour>; _KeyOfValue = std::_Select1st<std::pair<const int, RDKit::DrawColour> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:11:
/usr/include/c++/9/bits/stl_map.h: In function 'void RDKit::useBWAtomPalette(RDKit::MolDrawOptions&)':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In function 'void RDKit::{anonymous}::pyDictToColourMap(boost::python::api::object, RDKit::ColourPalette&)':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In function 'void RDKit::assignDefaultPalette(RDKit::ColourPalette&)':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp: In function 'void RDKit::{anonymous}::pyDictToDoubleMap(boost::python::api::object, std::map<int, double>&)':
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:72:57: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
   72 |     double r = python::extract<double>(tDict.values()[i]);
      |                                                         ^
[ 93%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Fragment.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/Fragment.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Fragment.cpp
[ 94%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/MolOps.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolops_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdmolops.dir/MolOps.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MolOps.cpp
[ 94%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogEntry.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogEntry.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogEntry.cpp
[ 94%] Linking CXX executable moldraw2DTestCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/cmake -E cmake_link_script CMakeFiles/moldraw2DTestCatch.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/moldraw2DTestCatch.dir/catch_tests.cpp.o  -o moldraw2DTestCatch  ../../../lib/libRDKitMolDraw2D.so.1.2019.09.1 ../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 -lboost_serialization ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 94%] Built target moldraw2DTestCatch
[ 94%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogParams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogParams.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogParams.cpp
[ 94%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.cpp
[ 94%] Linking CXX shared module ../../../../rdkit/Chem/Draw/rdMolDraw2D.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolDraw2D.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/Draw/rdMolDraw2D.so CMakeFiles/rdMolDraw2D.dir/rdMolDraw2D.cpp.o  ../../../../lib/libRDKitMolDraw2D.so.1.2019.09.1 ../../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lboost_serialization 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 94%] Built target rdMolDraw2D
[ 94%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogEntry.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogEntry.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogEntry.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MolOps.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::DrawColour>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
[ 94%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogParams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogParams.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogParams.cpp
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MolOps.cpp:30:
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:379:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  379 |       result = off_type(bp::extract<off_type>(py_tell()));
      |                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:186:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |       off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                        ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:156:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |         off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                          ^
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekpos(boost_adaptbx::python::streambuf::pos_type, std::ios_base::openmode)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:379:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  379 |       result = off_type(bp::extract<off_type>(py_tell()));
      |                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:60,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MolOps.cpp:12:
/usr/include/c++/9/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDKit::DrawColour>; _KeyOfValue = std::_Select1st<std::pair<const int, RDKit::DrawColour> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 94%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.cpp
[ 95%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogEntry.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogEntry.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogEntry.cpp
[ 95%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogParams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogParams.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogParams.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
[ 95%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.cpp
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 95%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogEntry.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogEntry.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogEntry.cpp
In file included from /usr/include/c++/9/map:61,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MolOps.cpp:12:
/usr/include/c++/9/bits/stl_map.h: In function 'std::string RDKit::molToSVG(const RDKit::ROMol&, unsigned int, unsigned int, boost::python::api::object, bool, unsigned int, unsigned int, bool, int)':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 95%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogParams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogParams.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogParams.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In function 'std::vector<std::shared_ptr<RDKit::ChemicalReaction> > RDKit::MolStandardize::readTransformations(std::istream&, int)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 95%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.cpp
[ 95%] Linking CXX shared module ../../../rdkit/Chem/rdmolops.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdmolops.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/Chem/rdmolops.so CMakeFiles/rdmolops.dir/rdmolops.cpp.o CMakeFiles/rdmolops.dir/MolOps.cpp.o  ../../../lib/libRDKitMolDraw2D.so.1.2019.09.1 ../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lboost_serialization 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 95%] Built target rdmolops
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In function 'std::vector<RDKit::MolStandardize::TautomerTransform> RDKit::MolStandardize::readTautomers(std::istream&, int)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 96%] Linking CXX shared library ../../../lib/libRDKitMolStandardize.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolStandardize.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitMolStandardize.so.1 -o ../../../lib/libRDKitMolStandardize.so.1.2019.09.1 CMakeFiles/MolStandardize.dir/MolStandardize.cpp.o CMakeFiles/MolStandardize.dir/Metal.cpp.o CMakeFiles/MolStandardize.dir/Normalize.cpp.o CMakeFiles/MolStandardize.dir/Validate.cpp.o CMakeFiles/MolStandardize.dir/Charge.cpp.o CMakeFiles/MolStandardize.dir/Tautomer.cpp.o CMakeFiles/MolStandardize.dir/Fragment.cpp.o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogEntry.cpp.o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogParams.cpp.o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogUtils.cpp.o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogEntry.cpp.o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogParams.cpp.o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogUtils.cpp.o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogEntry.cpp.o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogParams.cpp.o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogUtils.cpp.o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogEntry.cpp.o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogParams.cpp.o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogUtils.cpp.o  ../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lboost_serialization 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolStandardize.so.1.2019.09.1 ../../../lib/libRDKitMolStandardize.so.1 ../../../lib/libRDKitMolStandardize.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 96%] Built target MolStandardize
make -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/depend
make -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/DependInfo.cmake --color=
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/DependInfo.cmake --color=
make -f Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/DependInfo.cmake --color=
Scanning dependencies of target molValidateTest
Scanning dependencies of target molNormalizeTest
Scanning dependencies of target molStandardizeTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Scanning dependencies of target molStandardizeSmallTest
make -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 96%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/testValidate.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/molValidateTest.dir/testValidate.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/testValidate.cpp
[ 96%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/testNormalize.cpp.o
[ 96%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/molStandardizeTest.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/test1.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/molNormalizeTest.dir/testNormalize.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/testNormalize.cpp
[ 96%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/test2.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/molStandardizeSmallTest.dir/test2.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/test2.cpp
[ 97%] Linking CXX executable molNormalizeTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molNormalizeTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/molNormalizeTest.dir/testNormalize.cpp.o  -o molNormalizeTest  ../../../lib/libRDKitMolStandardize.so.1.2019.09.1 ../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex -lboost_serialization ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 97%] Built target molNormalizeTest
make -f Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/DependInfo.cmake --color=
Scanning dependencies of target molChargeTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 97%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/testCharge.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/molChargeTest.dir/testCharge.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/testCharge.cpp
[ 97%] Linking CXX executable molStandardizeSmallTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molStandardizeSmallTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/molStandardizeSmallTest.dir/test2.cpp.o  -o molStandardizeSmallTest  ../../../lib/libRDKitMolStandardize.so.1.2019.09.1 ../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex -lboost_serialization ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 97%] Built target molStandardizeSmallTest
make -f Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/DependInfo.cmake --color=
Scanning dependencies of target molTautomerTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 97%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/testTautomer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/molTautomerTest.dir/testTautomer.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/testTautomer.cpp
[ 97%] Linking CXX executable molValidateTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molValidateTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/molValidateTest.dir/testValidate.cpp.o  -o molValidateTest  ../../../lib/libRDKitMolStandardize.so.1.2019.09.1 ../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 -lboost_serialization ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 97%] Built target molValidateTest
make -f Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/DependInfo.cmake --color=
Scanning dependencies of target molFragmentTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 98%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/testFragment.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/molFragmentTest.dir/testFragment.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/testFragment.cpp
[ 99%] Linking CXX executable molStandardizeTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molStandardizeTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/molStandardizeTest.dir/test1.cpp.o  -o molStandardizeTest  ../../../lib/libRDKitMolStandardize.so.1.2019.09.1 ../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex -lboost_serialization ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 99%] Built target molStandardizeTest
make -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/DependInfo.cmake --color=
Scanning dependencies of target molStandardizeCatchTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 99%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/molStandardizeCatchTest.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/catch_tests.cpp
[ 99%] Linking CXX executable molChargeTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molChargeTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/molChargeTest.dir/testCharge.cpp.o  -o molChargeTest  ../../../lib/libRDKitMolStandardize.so.1.2019.09.1 ../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 -lboost_serialization ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 99%] Built target molChargeTest
make -f Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/build.make Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMolStandardize
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/build.make Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 99%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/rdMolStandardize.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMolStandardize.dir/rdMolStandardize.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap/rdMolStandardize.cpp
[ 99%] Linking CXX executable molFragmentTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molFragmentTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/molFragmentTest.dir/testFragment.cpp.o  -o molFragmentTest  ../../../lib/libRDKitMolStandardize.so.1.2019.09.1 ../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lboost_serialization 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 99%] Built target molFragmentTest
[ 99%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Validate.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMolStandardize.dir/Validate.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap/Validate.cpp
[ 99%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Charge.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMolStandardize.dir/Charge.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap/Charge.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/catch_tests.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/catch_tests.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 99%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Fragment.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMolStandardize.dir/Fragment.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap/Fragment.cpp
[ 99%] Linking CXX executable molTautomerTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molTautomerTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/molTautomerTest.dir/testTautomer.cpp.o  -o molTautomerTest  ../../../lib/libRDKitMolStandardize.so.1.2019.09.1 ../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 -lboost_serialization ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 99%] Built target molTautomerTest
[ 99%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Normalize.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMolStandardize.dir/Normalize.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap/Normalize.cpp
[ 99%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Metal.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMolStandardize.dir/Metal.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap/Metal.cpp
[100%] Linking CXX shared module ../../../../rdkit/Chem/MolStandardize/rdMolStandardize.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolStandardize.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/MolStandardize/rdMolStandardize.so CMakeFiles/rdMolStandardize.dir/rdMolStandardize.cpp.o CMakeFiles/rdMolStandardize.dir/Validate.cpp.o CMakeFiles/rdMolStandardize.dir/Charge.cpp.o CMakeFiles/rdMolStandardize.dir/Fragment.cpp.o CMakeFiles/rdMolStandardize.dir/Normalize.cpp.o CMakeFiles/rdMolStandardize.dir/Metal.cpp.o  ../../../../lib/libRDKitMolStandardize.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lboost_serialization 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[100%] Built target rdMolStandardize
[100%] Linking CXX executable molStandardizeCatchTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molStandardizeCatchTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/molStandardizeCatchTest.dir/catch_tests.cpp.o  -o molStandardizeCatchTest  ../../../lib/libRDKitMolStandardize.so.1.2019.09.1 ../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lboost_serialization 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[100%] Built target molStandardizeCatchTest
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles 0
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
STATIC_LINK=0 RDKIT_LIBDIR=/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf//lib pg_buildext build /<<PKGBUILDDIR>>/Code/PgSQL/rdkit build-%v
supported-versions: WARNING! Unknown distribution: raspbian
debian found in ID_LIKE, treating as Debian
### build 12 ###
make[2]: Entering directory '/<<PKGBUILDDIR>>/build-12'
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o rdkit_io.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_io.c
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o mol_op.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'mol_murckoscaffold':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:263:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  263 |   CROMol scaffold = MolMurckoScaffold(mol);
      |   ^~~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'mol_hash':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:283:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  283 |   char *res = pnstrdup(str, len);
      |   ^~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'mol_nm_hash':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:298:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  298 |   char *str = computeNMMolHash(mol, opts);
      |   ^~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:300:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  300 |   char *res = pnstrdup(str, strlen(str));
      |   ^~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:293:7: warning: unused variable 'len' [-Wunused-variable]
  293 |   int len;
      |       ^~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'mol_adjust_query_properties':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:313:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  313 |   char *data = PG_GETARG_CSTRING(1);
      |   ^~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:317:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  317 |   Mol *res = deconstructROMol(adj);
      |   ^~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'mol_to_svg':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:332:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  332 |   char *legend = PG_GETARG_CSTRING(1);
      |   ^~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'fmcs_smiles':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:356:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  356 |   char *res = pnstrdup(str, strlen(str));
      |   ^~~~
In file included from /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:34:
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'fmcs_mol2s_transition':
/usr/include/postgresql/12/server/fmgr.h:268:29: warning: initialization of 'CROMol' {aka 'void *'} from 'Datum' {aka 'unsigned int'} makes pointer from integer without a cast [-Wint-conversion]
  268 | #define PG_GETARG_DATUM(n)  (fcinfo->args[n].value)
      |                             ^
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:408:18: note: in expansion of macro 'PG_GETARG_DATUM'
  408 |     CROMol mol = PG_GETARG_DATUM(1);
      |                  ^~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:424:5: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  424 |     text *ts = (text *)palloc(ts_size);  // new return value
      |     ^~~~
In file included from /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:34:
/usr/include/postgresql/12/server/fmgr.h:268:29: warning: initialization of 'CROMol' {aka 'void *'} from 'Datum' {aka 'unsigned int'} makes pointer from integer without a cast [-Wint-conversion]
  268 | #define PG_GETARG_DATUM(n)  (fcinfo->args[n].value)
      |                             ^
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:436:18: note: in expansion of macro 'PG_GETARG_DATUM'
  436 |     CROMol mol = PG_GETARG_DATUM(1);
      |                  ^~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:444:5: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  444 |     char *smiles = makeMolText(mol, &len, false, false);
      |     ^~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'fmcs_mols':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:482:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  482 |   int32 ts_size = VARHDRSZ + strlen(str);
      |   ^~~~~
In file included from /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:34:
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'fmcs_mol_transition':
/usr/include/postgresql/12/server/fmgr.h:268:29: warning: initialization of 'CROMol' {aka 'void *'} from 'Datum' {aka 'unsigned int'} makes pointer from integer without a cast [-Wint-conversion]
  268 | #define PG_GETARG_DATUM(n)  (fcinfo->args[n].value)
      |                             ^
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:504:18: note: in expansion of macro 'PG_GETARG_DATUM'
  504 |     CROMol mol = PG_GETARG_DATUM(1);
      |                  ^~~~~~~~~~~~~~~
/usr/include/postgresql/12/server/fmgr.h:268:29: warning: initialization of 'CROMol' {aka 'void *'} from 'Datum' {aka 'unsigned int'} makes pointer from integer without a cast [-Wint-conversion]
  268 | #define PG_GETARG_DATUM(n)  (fcinfo->args[n].value)
      |                             ^
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:515:18: note: in expansion of macro 'PG_GETARG_DATUM'
  515 |     CROMol mol = PG_GETARG_DATUM(1);
      |                  ^~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'fmcs_smiles_transition':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:388:1: warning: control reaches end of non-void function [-Wreturn-type]
  388 | }
      | ^
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'fmcs_mol_transition':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:523:1: warning: control reaches end of non-void function [-Wreturn-type]
  523 | }
      | ^
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o bfp_op.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bfp_op.c
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o sfp_op.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/sfp_op.c
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o rxn_op.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rxn_op.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rxn_op.c:164:1: warning: multi-line comment [-Wcomment]
  164 | //  /* keep compiler quiet - no extra ; */                                \
      | ^
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rxn_op.c: In function 'reaction_to_svg':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rxn_op.c:179:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  179 |   bool highlightByReactants = PG_GETARG_BOOL(1);
      |   ^~~~
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o rdkit_gist.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c: In function 'soergeldistsign':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:240:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  240 |   uint8 *as = (uint8 *)VARDATA(a);
      |   ^~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c: In function 'soergeldist':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:275:16: warning: implicit declaration of function 'floor' [-Wimplicit-function-declaration]
  275 |   return (int) floor(10000*soergeldistsign(a, b));
      |                ^~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:275:16: warning: incompatible implicit declaration of built-in function 'floor'
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:42:1: note: include '<math.h>' or provide a declaration of 'floor'
   41 | #include "bitstring.h"
  +++ |+#include <math.h>
   42 | 
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:262:10: warning: unused variable 'd' [-Wunused-variable]
  262 |   double d;
      |          ^
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c: In function 'gmol_consistent':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:526:7: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  526 |       uint8 *k = (uint8 *)VARDATA(key);
      |       ^~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:538:7: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  538 |       uint8 *k = (uint8 *)VARDATA(key);
      |       ^~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:570:7: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  570 |       uint8 *k = (uint8 *)VARDATA(key);
      |       ^~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c: In function 'rdkit_consistent':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:658:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  658 |   int siglen = SIGLEN(query);
      |   ^~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:673:5: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  673 |     uint8 *k = (uint8 *)VARDATA(key);
      |     ^~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c: In function 'gsfp_consistent':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:708:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  708 |   int sum, overlapSum, overlapN;
      |   ^~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:714:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  714 |   int nKey = (ISALLTRUE(key)) ?
      |   ^~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c: In function 'greaction_consistent':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:787:7: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  787 |       uint8 *k = (uint8 *)VARDATA(key);
      |       ^~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:804:7: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  804 |       uint8 *k = (uint8 *)VARDATA(key);
      |       ^~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:832:7: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  832 |       uint8 *k = (uint8 *)VARDATA(key);
      |       ^~~~~
At top level:
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:646:1: warning: 'rdkit_consistent' defined but not used [-Wunused-function]
  646 | rdkit_consistent(GISTENTRY *entry, StrategyNumber strategy, bytea *key, bytea *query)
      | ^~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:261:1: warning: 'soergeldist' defined but not used [-Wunused-function]
  261 | soergeldist(bytea *a, bytea *b) {
      | ^~~~~~~~~~~
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o bfp_gist.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bfp_gist.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bfp_gist.c: In function 'merge_key':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bfp_gist.c:699:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  699 |   int siglen = GBFP_INNER_SIGLEN(result);
      |   ^~~
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o bfp_gin.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bfp_gin.c
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o low_gist.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/low_gist.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/low_gist.c: In function 'gslfp_consistent':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/low_gist.c:410:30: warning: implicit declaration of function 'searchSfpCache' [-Wimplicit-function-declaration]
  410 |   fcinfo->flinfo->fn_extra = searchSfpCache(
      |                              ^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/low_gist.c:410:28: warning: assignment to 'void *' from 'int' makes pointer from integer without a cast [-Wint-conversion]
  410 |   fcinfo->flinfo->fn_extra = searchSfpCache(
      |                            ^
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o guc.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/guc.c
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o cache.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/cache.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/cache.c: In function 'createCache':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/cache.c:312:17: warning: assignment discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers]
  312 |     methodsOrig = ctx->methods;
      |                 ^
In file included from /usr/include/postgresql/12/server/postgres.h:47,
                 from /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/cache.c:33:
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/cache.c:341:19: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'unsigned int' [-Wformat=]
  341 |       elog(ERROR, "Could not allocate %ld bytes", sizeof(*newholder));
      |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  ~~~~~~~~~~~~~~~~~~
      |                                                   |
      |                                                   unsigned int
/usr/include/postgresql/12/server/utils/elog.h:224:23: note: in definition of macro 'elog'
  224 |   elog_finish(elevel, __VA_ARGS__); \
      |                       ^~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/cache.c:341:41: note: format string is defined here
  341 |       elog(ERROR, "Could not allocate %ld bytes", sizeof(*newholder));
      |                                       ~~^
      |                                         |
      |                                         long int
      |                                       %d
g++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-function -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"' -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o adapter.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/adapter.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/adapter.cpp:32:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::DrawColour>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o bitstring.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bitstring.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bitstring.c: In function 'bitstringUnion':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bitstring.c:72:7: warning: unused variable 'i' [-Wunused-variable]
   72 |   int i;
      |       ^
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bitstring.c: In function 'bitstringIntersection':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bitstring.c:106:7: warning: unused variable 'i' [-Wunused-variable]
  106 |   int i;
      |       ^
g++ -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -shared -o rdkit.so rdkit_io.o mol_op.o bfp_op.o sfp_op.o rxn_op.o rdkit_gist.o bfp_gist.o bfp_gin.o low_gist.o guc.o cache.o adapter.o bitstring.o -L/usr/lib/arm-linux-gnueabihf  -Wl,-z,relro -Wl,-z,now -L/usr/lib/llvm-10/lib  -L/usr/lib/arm-linux-gnueabihf/mit-krb5 -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -L/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf//lib   -lRDKitMolDraw2D -lRDKitMolTransforms -lRDKitMolHash -lRDKitFMCS -lRDKitChemReactions -lRDKitChemTransforms -lRDKitFileParsers -lRDKitSmilesParse -lRDKitFingerprints -lRDKitSubgraphs -lRDKitDescriptors -lRDKitPartialCharges -lRDKitSubstructMatch  -lRDKitGraphMol -lRDKitEigenSolvers -lRDKitDataStructs -lRDKitDepictor -lRDKitRDGeometryLib -lRDKitRDGeneral -pthread  
sed -e's/@RDKIT_PG_BFP_GIST_FETCH@/FUNCTION    9   gbfp_fetch (internal),/;' \
-e's/@RDKIT_GIN_BFP_TRICONSISTENT@/FUNCTION    6   gin_bfp_triconsistent(internal, int2, bfp, int4, internal, internal, internal),/' \
-e's/@RDKIT_PARALLEL_SAFE@/PARALLEL SAFE/' \
 /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit.sql.in > rdkit--3.8.sql
/usr/bin/clang-10 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o rdkit_io.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_io.c
/usr/bin/clang-10 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o mol_op.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:388:1: warning: non-void function does not return a value in all control paths [-Wreturn-type]
}
^
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:408:12: warning: incompatible integer to pointer conversion initializing 'CROMol' (aka 'void *') with an expression of type 'Datum' (aka 'unsigned int') [-Wint-conversion]
    CROMol mol = PG_GETARG_DATUM(1);
           ^     ~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:436:12: warning: incompatible integer to pointer conversion initializing 'CROMol' (aka 'void *') with an expression of type 'Datum' (aka 'unsigned int') [-Wint-conversion]
    CROMol mol = PG_GETARG_DATUM(1);
           ^     ~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:504:12: warning: incompatible integer to pointer conversion initializing 'CROMol' (aka 'void *') with an expression of type 'Datum' (aka 'unsigned int') [-Wint-conversion]
    CROMol mol = PG_GETARG_DATUM(1);
           ^     ~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:515:12: warning: incompatible integer to pointer conversion initializing 'CROMol' (aka 'void *') with an expression of type 'Datum' (aka 'unsigned int') [-Wint-conversion]
    CROMol mol = PG_GETARG_DATUM(1);
           ^     ~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:523:1: warning: non-void function does not return a value in all control paths [-Wreturn-type]
}
^
6 warnings generated.
/usr/bin/clang-10 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o bfp_op.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bfp_op.c
/usr/bin/clang-10 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o sfp_op.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/sfp_op.c
/usr/bin/clang-10 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o rxn_op.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rxn_op.c
/usr/bin/clang-10 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o rdkit_gist.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c
/usr/bin/clang-10 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o bfp_gist.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bfp_gist.c
/usr/bin/clang-10 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o bfp_gin.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bfp_gin.c
/usr/bin/clang-10 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o low_gist.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/low_gist.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/low_gist.c:410:30: warning: implicit declaration of function 'searchSfpCache' is invalid in C99 [-Wimplicit-function-declaration]
  fcinfo->flinfo->fn_extra = searchSfpCache(
                             ^
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/low_gist.c:410:28: warning: incompatible integer to pointer conversion assigning to 'void *' from 'int' [-Wint-conversion]
  fcinfo->flinfo->fn_extra = searchSfpCache(
                           ^ ~~~~~~~~~~~~~~~
2 warnings generated.
/usr/bin/clang-10 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o guc.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/guc.c
/usr/bin/clang-10 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o cache.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/cache.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/cache.c:312:17: warning: assigning to 'MemoryContextMethods *' (aka 'struct MemoryContextMethods *') from 'const MemoryContextMethods *' (aka 'const struct MemoryContextMethods *') discards qualifiers [-Wincompatible-pointer-types-discards-qualifiers]
    methodsOrig = ctx->methods;
                ^ ~~~~~~~~~~~~
1 warning generated.
/usr/bin/clang-10 -xc++ -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -emit-llvm -c -o adapter.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/adapter.cpp
In file included from /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/adapter.cpp:54:
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DSVG.h:74:8: warning: 'tagAtoms' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
  void tagAtoms(const ROMol &mol) { tagAtoms(mol, 0.2); }
       ^
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:429:16: note: overridden virtual function is here
  virtual void tagAtoms(const ROMol &mol) { RDUNUSED_PARAM(mol); };
               ^
1 warning generated.
opt-10 -module-summary -f adapter.bc -o adapter.bc
/usr/bin/clang-10 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o bitstring.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bitstring.c
make[2]: Leaving directory '/<<PKGBUILDDIR>>/build-12'
(cd /<<PKGBUILDDIR>>/Code; doxygen doxygen/doxygen.config)
warning: Tag 'SYMBOL_CACHE_SIZE' at line 337 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'SHOW_DIRECTORIES' at line 557 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'HTML_ALIGN_MEMBERS' at line 971 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'USE_INLINE_TREES' at line 1162 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'XML_SCHEMA' at line 1425 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'XML_DTD' at line 1431 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'PERL_PATH' at line 1596 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'MSCGEN_PATH' at line 1617 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: doxygen no longer ships with the FreeSans font.
You may want to clear or change DOT_FONTNAME.
Otherwise you run the risk that the wrong font is being used for dot generated graphs.
Searching for include files...
Searching for example files...
Searching for images...
Searching for dot files...
Searching for msc files...
Searching for dia files...
Searching for files to exclude
Searching INPUT for files to process...
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/tutorial
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/Depictor
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/FMCS
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/libs
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MMPA
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/QTDemo
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolHash
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/docs
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/docs/_images
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/docs/_static
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/docs/_static/css
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/docs/_static/fonts
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/docs/_static/js
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/Substruct
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary
Searching for files in directory /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory
Searching for files in directory /<<PKGBUILDDIR>>/Code/Catalogs
Searching for files in directory /<<PKGBUILDDIR>>/Code/DataStructs
Searching for files in directory /<<PKGBUILDDIR>>/Code/Query
Searching for files in directory /<<PKGBUILDDIR>>/Code/ML
Searching for files in directory /<<PKGBUILDDIR>>/Code/ML/Cluster
Searching for files in directory /<<PKGBUILDDIR>>/Code/ML/Cluster/Murtagh
Searching for files in directory /<<PKGBUILDDIR>>/Code/ML/Data
Searching for files in directory /<<PKGBUILDDIR>>/Code/ML/InfoTheory
Searching for files in directory /<<PKGBUILDDIR>>/Code/DataManip
Searching for files in directory /<<PKGBUILDDIR>>/Code/DataManip/MetricMatrixCalc
Searching for files in directory /<<PKGBUILDDIR>>/Code/SimDivPickers
Searching for files in directory /<<PKGBUILDDIR>>/Code/RDGeneral
Searching for files in directory /<<PKGBUILDDIR>>/Code/RDGeneral/hash
Searching for files in directory /<<PKGBUILDDIR>>/Code/RDGeneral/hash/detail
Searching for files in directory /<<PKGBUILDDIR>>/Code/RDBoost
Searching for files in directory /<<PKGBUILDDIR>>/Code/DistGeom
Searching for files in directory /<<PKGBUILDDIR>>/Code/ForceField
Searching for files in directory /<<PKGBUILDDIR>>/Code/ForceField/MMFF
Searching for files in directory /<<PKGBUILDDIR>>/Code/ForceField/UFF
Searching for files in directory /<<PKGBUILDDIR>>/Code/Numerics
Searching for files in directory /<<PKGBUILDDIR>>/Code/Numerics/Alignment
Searching for files in directory /<<PKGBUILDDIR>>/Code/Numerics/EigenSolvers
Searching for files in directory /<<PKGBUILDDIR>>/Code/Numerics/Optimizer
Searching for files in directory /<<PKGBUILDDIR>>/Code/Geometry
Searching for files in directory /<<PKGBUILDDIR>>/Code/Features
Searching for files in directory /<<PKGBUILDDIR>>/Code/ChemicalFeatures
Reading and parsing tag files
Parsing files
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/atomic_data.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/atomic_data.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/AtomIterators.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/AtomIterators.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Bond.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Bond.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/BondIterators.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/BondIterators.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Canon.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Canon.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/CartesianProduct.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/CartesianProduct.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/Enumerate.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/Enumerate.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/EnumerateBase.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/EnumerateBase.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/EnumerateTypes.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/EnumerateTypes.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/EnumerationPickler.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/EnumerationPickler.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/EnumerationStrategyBase.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/EnumerationStrategyBase.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/EvenSamplePairs.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/EvenSamplePairs.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/RandomSample.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/RandomSample.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/RandomSampleAllBBs.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/RandomSampleAllBBs.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/PreprocessRxn.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/PreprocessRxn.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionFingerprints.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionFingerprints.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionParser.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionParser.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionPickler.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionPickler.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionRunner.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionRunner.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/SanitizeRxn.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/SanitizeRxn.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/ChemTransforms.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/ChemTransforms.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/MolFragmenter.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/MolFragmenter.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Chirality.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Chirality.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/DepictUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/DepictUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/AUTOCORR2D.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/AUTOCORR2D.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/AUTOCORR3D.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/AUTOCORR3D.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/ConnectivityDescriptors.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/ConnectivityDescriptors.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Crippen.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Crippen.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Data3Ddescriptors.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Data3Ddescriptors.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/EEM.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/EEM.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/GETAWAY.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/GETAWAY.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Lipinski.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Lipinski.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MolData3Ddescriptors.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MolData3Ddescriptors.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MolDescriptors.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MolDescriptors.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MolDescriptors3D.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MolDescriptors3D.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MolSurf.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MolSurf.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MORSE.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MORSE.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MQN.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MQN.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/PBF.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/PBF.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/PMI.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/PMI.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Property.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Property.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/RDF.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/RDF.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/RegisterDescriptor.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/RegisterDescriptor.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/USRDescriptor.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/USRDescriptor.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/WHIM.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/WHIM.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/details.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/details.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Embedder.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Embedder.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParserUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParserUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileStereochem.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileStereochem.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupParsing.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupParsing.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSupplier.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSupplier.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolWriters.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolWriters.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/ProximityBonds.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/ProximityBonds.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SequenceParsers.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SequenceParsers.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SequenceWriters.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SequenceWriters.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalog.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalog.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalogEntry.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalogEntry.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Filters.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Filters.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FunctionalGroupHierarchy.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FunctionalGroupHierarchy.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairGenerator.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairGenerator.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairs.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairs.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintGenerator.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintGenerator.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintUtil.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintUtil.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MACCS.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MACCS.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganFingerprints.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganFingerprints.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/RDKitFPGenerator.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/RDKitFPGenerator.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Composition2N.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Composition2N.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/DebugTrace.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/DebugTrace.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/DuplicatedSeedCache.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/DuplicatedSeedCache.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/FMCS.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/FMCS.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Graph.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Graph.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/MatchTable.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/MatchTable.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/MaximumCommonSubgraph.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/MaximumCommonSubgraph.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/RingMatchTableSet.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/RingMatchTableSet.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Seed.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Seed.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/SeedSet.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/SeedSet.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/SubstructMatchCustom.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/SubstructMatchCustom.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/SubstructureCache.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/SubstructureCache.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Target.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Target.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/TargetMatch.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/TargetMatch.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionAngleM6.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionAngleM6.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/FFConvenience.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/FFConvenience.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/AtomTyper.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/AtomTyper.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/Builder.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/Builder.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/MMFF.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/MMFF.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/AtomTyper.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/AtomTyper.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/Builder.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/Builder.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/UFF.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/UFF.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatalogEntry.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatalogEntry.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatalogUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatalogUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatGenerator.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatGenerator.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatParams.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatParams.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragFPGenerator.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragFPGenerator.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MMPA/MMPA.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MMPA/MMPA.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/AlignMolecules.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/AlignMolecules.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/O3AAlignMolecules.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/O3AAlignMolecules.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolBundle.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolBundle.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/MolCatalog.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/MolCatalog.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/MolCatalogEntry.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/MolCatalogEntry.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/MolCatalogParams.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/MolCatalogParams.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/FeatureParser.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/FeatureParser.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeature.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeature.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureFactory.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureFactory.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DCairo.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DCairo.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DDetails.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DDetails.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DQt.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DQt.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DSVG.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DSVG.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2Dwx.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2Dwx.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MultiMolDraw2D.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MultiMolDraw2D.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/mf.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/mf.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/MolHash.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/MolHash.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/nmmolhash.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/nmmolhash.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/details.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/details.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/MolInterchange.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/MolInterchange.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogEntry.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogEntry.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogParams.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogParams.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Charge.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Charge.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Fragment.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Fragment.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogEntry.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogEntry.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogParams.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogParams.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Metal.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Metal.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/MolStandardize.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/MolStandardize.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Normalize.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Normalize.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Tautomer.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Tautomer.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogEntry.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogEntry.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogParams.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogParams.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogEntry.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogEntry.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogParams.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogParams.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Validate.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Validate.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/MolTransforms.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/MolTransforms.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MonomerInfo.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MonomerInfo.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/new_canon.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/new_canon.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerCharges.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerCharges.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerParams.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerParams.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/PeriodicTable.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/PeriodicTable.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/QueryAtom.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/QueryAtom.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/QueryBond.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/QueryBond.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/RDKitQueries.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/RDKitQueries.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs/ReducedGraphs.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs/ReducedGraphs.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Resonance.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Resonance.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupDecomp.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupDecomp.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/RingInfo.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/RingInfo.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Rings.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Rings.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/SanitException.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/SanitException.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/ShapeEncoder.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/ShapeEncoder.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/ShapeUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/ShapeUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNAttribs.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNAttribs.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNParse.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNParse.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNParseOps.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNParseOps.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/primes.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/primes.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmartsWrite.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmartsWrite.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesParse.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesParse.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesParseOps.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesParseOps.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesWrite.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesWrite.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/StereoGroup.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/StereoGroup.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/Pattern.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/Pattern.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/ReCharge.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/ReCharge.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/Stereo.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/Stereo.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/StripSmallFragments.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/StripSmallFragments.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/StructChecker.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/StructChecker.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/StructCheckerOptions.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/StructCheckerOptions.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/Tautomer.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/Tautomer.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/Utilites.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/Utilites.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/Subgraphs.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/Subgraphs.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/SubgraphUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/SubgraphUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/SubstructLibrary.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/SubstructLibrary.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/SubstructLibrarySerialization.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/SubstructLibrarySerialization.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Snapshot.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Snapshot.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Trajectory.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Trajectory.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.h...
Parsing file /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Catalogs/CatalogEntry.h...
Parsing file /<<PKGBUILDDIR>>/Code/Catalogs/CatalogEntry.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Catalogs/CatalogParams.h...
Parsing file /<<PKGBUILDDIR>>/Code/Catalogs/CatalogParams.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DataStructs/base64.h...
Parsing file /<<PKGBUILDDIR>>/Code/DataStructs/base64.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DataStructs/BitOps.h...
Parsing file /<<PKGBUILDDIR>>/Code/DataStructs/BitOps.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DataStructs/BitVect.h...
Parsing file /<<PKGBUILDDIR>>/Code/DataStructs/BitVect.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DataStructs/BitVects.h...
Parsing file /<<PKGBUILDDIR>>/Code/DataStructs/BitVects.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DataStructs/BitVectUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/DataStructs/BitVectUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DataStructs/DatastructsException.h...
Parsing file /<<PKGBUILDDIR>>/Code/DataStructs/DatastructsException.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DataStructs/DatastructsStreamOps.h...
Parsing file /<<PKGBUILDDIR>>/Code/DataStructs/DatastructsStreamOps.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DataStructs/DiscreteDistMat.h...
Parsing file /<<PKGBUILDDIR>>/Code/DataStructs/DiscreteDistMat.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DataStructs/DiscreteValueVect.h...
Parsing file /<<PKGBUILDDIR>>/Code/DataStructs/DiscreteValueVect.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DataStructs/ExplicitBitVect.h...
Parsing file /<<PKGBUILDDIR>>/Code/DataStructs/ExplicitBitVect.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DataStructs/FPBReader.h...
Parsing file /<<PKGBUILDDIR>>/Code/DataStructs/FPBReader.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DataStructs/MultiFPBReader.h...
Parsing file /<<PKGBUILDDIR>>/Code/DataStructs/MultiFPBReader.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DataStructs/SparseBitVect.h...
Parsing file /<<PKGBUILDDIR>>/Code/DataStructs/SparseBitVect.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DataStructs/SparseIntVect.h...
Parsing file /<<PKGBUILDDIR>>/Code/DataStructs/SparseIntVect.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Query/AndQuery.h...
Parsing file /<<PKGBUILDDIR>>/Code/Query/AndQuery.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Query/EqualityQuery.h...
Parsing file /<<PKGBUILDDIR>>/Code/Query/EqualityQuery.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Query/GreaterEqualQuery.h...
Parsing file /<<PKGBUILDDIR>>/Code/Query/GreaterEqualQuery.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Query/GreaterQuery.h...
Parsing file /<<PKGBUILDDIR>>/Code/Query/GreaterQuery.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Query/LessEqualQuery.h...
Parsing file /<<PKGBUILDDIR>>/Code/Query/LessEqualQuery.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Query/LessQuery.h...
Parsing file /<<PKGBUILDDIR>>/Code/Query/LessQuery.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Query/NullQueryAlgebra.h...
Parsing file /<<PKGBUILDDIR>>/Code/Query/NullQueryAlgebra.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Query/OrQuery.h...
Parsing file /<<PKGBUILDDIR>>/Code/Query/OrQuery.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Query/Query.h...
Parsing file /<<PKGBUILDDIR>>/Code/Query/Query.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h...
Parsing file /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Query/RangeQuery.h...
Parsing file /<<PKGBUILDDIR>>/Code/Query/RangeQuery.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Query/SetQuery.h...
Parsing file /<<PKGBUILDDIR>>/Code/Query/SetQuery.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Query/XOrQuery.h...
Parsing file /<<PKGBUILDDIR>>/Code/Query/XOrQuery.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ML/InfoTheory/CorrMatGenerator.h...
Parsing file /<<PKGBUILDDIR>>/Code/ML/InfoTheory/CorrMatGenerator.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ML/InfoTheory/InfoBitRanker.h...
Parsing file /<<PKGBUILDDIR>>/Code/ML/InfoTheory/InfoBitRanker.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ML/InfoTheory/InfoGainFuncs.h...
Parsing file /<<PKGBUILDDIR>>/Code/ML/InfoTheory/InfoGainFuncs.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DataManip/MetricMatrixCalc/MetricFuncs.h...
Parsing file /<<PKGBUILDDIR>>/Code/DataManip/MetricMatrixCalc/MetricFuncs.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DataManip/MetricMatrixCalc/MetricMatrixCalc.h...
Parsing file /<<PKGBUILDDIR>>/Code/DataManip/MetricMatrixCalc/MetricMatrixCalc.h...
Preprocessing /<<PKGBUILDDIR>>/Code/SimDivPickers/DistPicker.h...
Parsing file /<<PKGBUILDDIR>>/Code/SimDivPickers/DistPicker.h...
Preprocessing /<<PKGBUILDDIR>>/Code/SimDivPickers/HierarchicalClusterPicker.h...
Parsing file /<<PKGBUILDDIR>>/Code/SimDivPickers/HierarchicalClusterPicker.h...
Preprocessing /<<PKGBUILDDIR>>/Code/SimDivPickers/LeaderPicker.h...
Parsing file /<<PKGBUILDDIR>>/Code/SimDivPickers/LeaderPicker.h...
Preprocessing /<<PKGBUILDDIR>>/Code/SimDivPickers/MaxMinPicker.h...
Parsing file /<<PKGBUILDDIR>>/Code/SimDivPickers/MaxMinPicker.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/BoostEndInclude.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/BoostEndInclude.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/BoostStartInclude.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/BoostStartInclude.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/Exceptions.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/Exceptions.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/export.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/export.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/FileParseException.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/FileParseException.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/hanoiSort.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/hanoiSort.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/LocaleSwitcher.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/LocaleSwitcher.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/Ranking.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/Ranking.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/RDAny.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/RDAny.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/RDConfig.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/RDConfig.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/RDProps.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/RDProps.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/RDThreads.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/RDThreads.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue-doublemagic.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue-doublemagic.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue-taggedunion.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue-taggedunion.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/StreamOps.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/StreamOps.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/types.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/types.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDGeneral/versions.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDGeneral/versions.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDBoost/boost_numpy.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDBoost/boost_numpy.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDBoost/import_array.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDBoost/import_array.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDBoost/iterator_next.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDBoost/iterator_next.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDBoost/pyint_api.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDBoost/pyint_api.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDBoost/python.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDBoost/python.h...
Preprocessing /<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h...
Parsing file /<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DistGeom/BoundsMatrix.h...
Parsing file /<<PKGBUILDDIR>>/Code/DistGeom/BoundsMatrix.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DistGeom/ChiralSet.h...
Parsing file /<<PKGBUILDDIR>>/Code/DistGeom/ChiralSet.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DistGeom/ChiralViolationContrib.h...
Parsing file /<<PKGBUILDDIR>>/Code/DistGeom/ChiralViolationContrib.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DistGeom/DistGeomUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/DistGeom/DistGeomUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DistGeom/DistViolationContrib.h...
Parsing file /<<PKGBUILDDIR>>/Code/DistGeom/DistViolationContrib.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DistGeom/FourthDimContrib.h...
Parsing file /<<PKGBUILDDIR>>/Code/DistGeom/FourthDimContrib.h...
Preprocessing /<<PKGBUILDDIR>>/Code/DistGeom/TriangleSmooth.h...
Parsing file /<<PKGBUILDDIR>>/Code/DistGeom/TriangleSmooth.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/Contrib.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/Contrib.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/ForceField.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/ForceField.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/MMFF/AngleBend.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/MMFF/AngleBend.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/MMFF/AngleConstraint.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/MMFF/AngleConstraint.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/MMFF/BondStretch.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/MMFF/BondStretch.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Contribs.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Contribs.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/MMFF/DistanceConstraint.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/MMFF/DistanceConstraint.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Nonbonded.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Nonbonded.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/MMFF/OopBend.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/MMFF/OopBend.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Params.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Params.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/MMFF/PositionConstraint.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/MMFF/PositionConstraint.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/MMFF/StretchBend.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/MMFF/StretchBend.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/MMFF/TorsionAngle.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/MMFF/TorsionAngle.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/MMFF/TorsionConstraint.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/MMFF/TorsionConstraint.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/UFF/AngleBend.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/UFF/AngleBend.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/UFF/AngleConstraint.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/UFF/AngleConstraint.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/UFF/BondStretch.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/UFF/BondStretch.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/UFF/Contribs.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/UFF/Contribs.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/UFF/DistanceConstraint.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/UFF/DistanceConstraint.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/UFF/Inversion.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/UFF/Inversion.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/UFF/Nonbonded.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/UFF/Nonbonded.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/UFF/Params.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/UFF/Params.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/UFF/PositionConstraint.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/UFF/PositionConstraint.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ForceField/UFF/TorsionAngle.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/UFF/TorsionAngle.h...
Preprocessing /build/rdkit-KUGk6/<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.h:66: warning: documented symbol 'for experimental torsion angle RDKit::DGeomHelpers::preferences' was not declared or defined.
/<<PKGBUILDDIR>>/Code/GraphMol/MolHash/nmmolhash.h:25: warning: documented symbol 'enum RDKIT_MOLHASH_EXPORT RDKit::MolHash::HashFunction' was not declared or defined.
/<<PKGBUILDDIR>>/Code/GraphMol/MolHash/nmmolhash.h:47: warning: documented symbol 'enum RDKIT_MOLHASH_EXPORT RDKit::MolHash::StripType' was not declared or defined.
C/rdkit-201909.1/Code/ForceField/UFF/TorsionConstraint.h...
Parsing file /<<PKGBUILDDIR>>/Code/ForceField/UFF/TorsionConstraint.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Numerics/Alignment/AlignPoints.h...
Parsing file /<<PKGBUILDDIR>>/Code/Numerics/Alignment/AlignPoints.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Numerics/Conrec.h...
Parsing file /<<PKGBUILDDIR>>/Code/Numerics/Conrec.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Numerics/EigenSolvers/PowerEigenSolver.h...
Parsing file /<<PKGBUILDDIR>>/Code/Numerics/EigenSolvers/PowerEigenSolver.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Numerics/Matrix.h...
Parsing file /<<PKGBUILDDIR>>/Code/Numerics/Matrix.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/BFGSOpt.h...
Parsing file /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/BFGSOpt.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Numerics/SquareMatrix.h...
Parsing file /<<PKGBUILDDIR>>/Code/Numerics/SquareMatrix.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Numerics/SymmMatrix.h...
Parsing file /<<PKGBUILDDIR>>/Code/Numerics/SymmMatrix.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Numerics/Vector.h...
Parsing file /<<PKGBUILDDIR>>/Code/Numerics/Vector.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Geometry/Grid3D.h...
Parsing file /<<PKGBUILDDIR>>/Code/Geometry/Grid3D.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Geometry/GridUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/Geometry/GridUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Geometry/point.h...
Parsing file /<<PKGBUILDDIR>>/Code/Geometry/point.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Geometry/Transform.h...
Parsing file /<<PKGBUILDDIR>>/Code/Geometry/Transform.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Geometry/Transform2D.h...
Parsing file /<<PKGBUILDDIR>>/Code/Geometry/Transform2D.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Geometry/Transform3D.h...
Parsing file /<<PKGBUILDDIR>>/Code/Geometry/Transform3D.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Geometry/UniformGrid3D.h...
Parsing file /<<PKGBUILDDIR>>/Code/Geometry/UniformGrid3D.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Geometry/Utils.h...
Parsing file /<<PKGBUILDDIR>>/Code/Geometry/Utils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/Features/Feature.h...
Parsing file /<<PKGBUILDDIR>>/Code/Features/Feature.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ChemicalFeatures/ChemicalFeature.h...
Parsing file /<<PKGBUILDDIR>>/Code/ChemicalFeatures/ChemicalFeature.h...
Preprocessing /<<PKGBUILDDIR>>/Code/ChemicalFeatures/FreeChemicalFeature.h...
Parsing file /<<PKGBUILDDIR>>/Code/ChemicalFeatures/FreeChemicalFeature.h...
Building group list...
Building directory list...
Building namespace list...
Building file list...
Building class list...
Computing nesting relations for classes...
Associating documentation with classes...
Building example list...
Searching for enumerations...
Searching for documented typedefs...
Searching for members imported via using declarations...
Searching for included using directives...
Searching for documented variables...
Building interface member list...
Building member list...
Searching for friends...
Searching for documented defines...
Computing class inheritance relations...
Computing class usage relations...
Flushing cached template relations that have become invalid...
Computing class relations...
Add enum values to enums...
Searching for member function documentation...
Creating members for template instances...
Building page list...
Search for main page...
Computing page relations...
Determining the scope of groups...
Sorting lists...
Determining which enums are documented
Computing member relations...
Building full member lists recursively...
Adding members to member groups.
Computing member references...
Inheriting documentation...
Generating disk names...
Adding source references...
Adding xrefitems...
Sorting member lists...
Setting anonymous enum type...
Computing dependencies between directories...
Generating citations page...
Counting members...
Counting data structures...
Resolving user defined references...
Finding anchors and sections in the documentation...
Transferring function references...
Combining using relations...
Adding members to index pages...
Correcting members for VHDL...
Generating style sheet...
Generating search indices...
Generating example documentation...
Generating file sources...
Generating code for file AcidBaseCatalogEntry.h...
Generating code for file AcidBaseCatalogParams.h...
Generating code for file AcidBaseCatalogUtils.h...
Generating code for file AlignMolecules.h...
Generating code for file AlignPoints.h...
Generating code for file AndQuery.h...
Generating code for file AngleBend.h...
Generating code for file AngleBend.h...
Generating code for file AngleConstraint.h...
Generating code for file AngleConstraint.h...
Generating code for file Atom.h...
Generating code for file atomic_data.h...
Generating code for file AtomIterators.h...
Generating code for file AtomPairGenerator.h...
Generating code for file AtomPairs.h...
Generating code for file AtomTyper.h...
Generating code for file AtomTyper.h...
Generating code for file AUTOCORR2D.h...
Generating code for file AUTOCORR3D.h...
Generating code for file BadFileException.h...
Generating code for file base64.h...
Generating code for file BFGSOpt.h...
Generating code for file BitOps.h...
Generating code for file BitVect.h...
Generating code for file BitVects.h...
Generating code for file BitVectUtils.h...
Generating code for file Bond.h...
Generating code for file BondIterators.h...
Generating code for file BondStretch.h...
Generating code for file BondStretch.h...
Generating code for file boost_numpy.h...
Generating code for file BoostEndInclude.h...
Generating code for file BoostStartInclude.h...
Generating code for file BoundsMatrix.h...
Generating code for file BoundsMatrixBuilder.h...
Generating code for file Builder.h...
Generating code for file Builder.h...
Generating code for file Canon.h...
Generating code for file CartesianProduct.h...
Generating code for file Catalog.h...
Generating code for file CatalogEntry.h...
Generating code for file CatalogParams.h...
Generating code for file Charge.h...
Generating code for file ChemicalFeature.h...
Generating code for file ChemTransforms.h...
Generating code for file Chirality.h...
Generating code for file ChiralSet.h...
Generating code for file ChiralViolationContrib.h...
Generating code for file Composition2N.h...
Generating code for file Conformer.h...
Generating code for file ConnectivityDescriptors.h...
Generating code for file Conrec.h...
Generating code for file Contrib.h...
Generating code for file Contribs.h...
Generating code for file Contribs.h...
Generating code for file CorrMatGenerator.h...
Generating code for file Crippen.h...
Generating code for file Data3Ddescriptors.h...
Generating code for file DatastructsException.h...
Generating code for file DatastructsStreamOps.h...
Generating code for file DebugTrace.h...
Generating code for file DepictUtils.h...
Generating code for file details.h...
Generating code for file details.h...
Generating code for file Dict.h...
Generating code for file DiscreteDistMat.h...
Generating code for file DiscreteValueVect.h...
Generating code for file DistanceConstraint.h...
Generating code for file DistanceConstraint.h...
Generating code for file DistGeomUtils.h...
Generating code for file DistPicker.h...
Generating code for file DistViolationContrib.h...
Generating code for file DuplicatedSeedCache.h...
Generating code for file EEM.h...
Generating code for file EmbeddedFrag.h...
Generating code for file Embedder.h...
Generating code for file Enumerate.h...
Generating code for file EnumerateBase.h...
Generating code for file EnumerateTypes.h...
Generating code for file EnumerationPickler.h...
Generating code for file EnumerationStrategyBase.h...
Generating code for file EqualityQuery.h...
Generating code for file EvenSamplePairs.h...
Generating code for file Exceptions.h...
Generating code for file ExplicitBitVect.h...
Generating code for file export.h...
Generating code for file Feature.h...
Generating code for file FeatureParser.h...
Generating code for file FFConvenience.h...
Generating code for file FileParseException.h...
Generating code for file FileParsers.h...
Generating code for file FileParserUtils.h...
Generating code for file FilterCatalog.h...
Generating code for file FilterCatalogEntry.h...
Generating code for file FilterMatcherBase.h...
Generating code for file FilterMatchers.h...
Generating code for file Filters.h...
Generating code for file FingerprintGenerator.h...
Generating code for file Fingerprints.h...
Generating code for file FingerprintUtil.h...
Generating code for file FMCS.h...
Generating code for file ForceField.h...
Generating code for file FourthDimContrib.h...
Generating code for file FPBReader.h...
Generating code for file FragCatalogEntry.h...
Generating code for file FragCatalogUtils.h...
Generating code for file FragCatGenerator.h...
Generating code for file FragCatParams.h...
Generating code for file FragFPGenerator.h...
Generating code for file Fragment.h...
Generating code for file FragmentCatalogEntry.h...
Generating code for file FragmentCatalogParams.h...
Generating code for file FragmentCatalogUtils.h...
Generating code for file FreeChemicalFeature.h...
Generating code for file FunctionalGroupHierarchy.h...
Generating code for file GasteigerCharges.h...
Generating code for file GasteigerParams.h...
Generating code for file GETAWAY.h...
Generating code for file Graph.h...
Generating code for file GraphMol.h...
Generating code for file GreaterEqualQuery.h...
Generating code for file GreaterQuery.h...
Generating code for file Grid3D.h...
Generating code for file GridUtils.h...
Generating code for file hanoiSort.h...
Generating code for file HierarchicalClusterPicker.h...
Generating code for file import_array.h...
Generating code for file InfoBitRanker.h...
Generating code for file InfoGainFuncs.h...
Generating code for file Invariant.h...
Generating code for file Inversion.h...
Generating code for file iterator_next.h...
Generating code for file LeaderPicker.h...
Generating code for file LessEqualQuery.h...
Generating code for file LessQuery.h...
Generating code for file Lipinski.h...
Generating code for file LocaleSwitcher.h...
Generating code for file MACCS.h...
Generating code for file MatchTable.h...
Generating code for file Matrix.h...
Generating code for file MaximumCommonSubgraph.h...
Generating code for file MaxMinPicker.h...
Generating code for file Metal.h...
Generating code for file MetricFuncs.h...
Generating code for file MetricMatrixCalc.h...
Generating code for file mf.h...
Generating code for file MMFF.h...
Generating code for file MMPA.h...
Generating code for file MolBundle.h...
Generating code for file MolCatalog.h...
Generating code for file MolCatalogEntry.h...
Generating code for file MolCatalogParams.h...
Generating code for file MolChemicalFeature.h...
Generating code for file MolChemicalFeatureDef.h...
Generating code for file MolChemicalFeatureFactory.h...
Generating code for file MolData3Ddescriptors.h...
Generating code for file MolDescriptors.h...
Generating code for file MolDescriptors3D.h...
Generating code for file MolDraw2D.h...
Generating code for file MolDraw2DCairo.h...
Generating code for file MolDraw2DDetails.h...
Generating code for file MolDraw2DQt.h...
Generating code for file MolDraw2DSVG.h...
Generating code for file MolDraw2DUtils.h...
Generating code for file MolDraw2Dwx.h...
Generating code for file MolFileStereochem.h...
Generating code for file MolFragmenter.h...
Generating code for file MolHash.h...
Generating code for file MolInterchange.h...
Generating code for file MolOps.h...
Generating code for file MolPickler.h...
Generating code for file MolSGroupParsing.h...
Generating code for file MolSGroupWriting.h...
Generating code for file MolStandardize.h...
Generating code for file MolSupplier.h...
Generating code for file MolSurf.h...
Generating code for file MolTransforms.h...
Generating code for file MolWriters.h...
Generating code for file MonomerInfo.h...
Generating code for file MorganFingerprints.h...
Generating code for file MorganGenerator.h...
Generating code for file MORSE.h...
Generating code for file MQN.h...
Generating code for file MultiFPBReader.h...
Generating code for file MultiMolDraw2D.h...
Generating code for file new_canon.h...
Generating code for file nmmolhash.h...
Generating code for file Nonbonded.h...
Generating code for file Nonbonded.h...
Generating code for file Normalize.h...
Generating code for file NullQueryAlgebra.h...
Generating code for file O3AAlignMolecules.h...
Generating code for file OopBend.h...
Generating code for file OrQuery.h...
Generating code for file Params.h...
Generating code for file Params.h...
Generating code for file Pattern.h...
Generating code for file PBF.h...
Generating code for file PeriodicTable.h...
Generating code for file PMI.h...
Generating code for file point.h...
Generating code for file PositionConstraint.h...
Generating code for file PositionConstraint.h...
Generating code for file PowerEigenSolver.h...
Generating code for file PreprocessRxn.h...
Generating code for file primes.h...
Generating code for file Property.h...
Generating code for file ProximityBonds.h...
Generating code for file pyint_api.h...
Generating code for file PySequenceHolder.h...
Generating code for file python.h...
Generating code for file python_streambuf.h...
Generating code for file Query.h...
Generating code for file QueryAtom.h...
Generating code for file QueryBond.h...
Generating code for file QueryObjects.h...
Generating code for file QueryOps.h...
Generating code for file RandomSample.h...
Generating code for file RandomSampleAllBBs.h...
Generating code for file RangeQuery.h...
Generating code for file Ranking.h...
Generating code for file RDAny.h...
Generating code for file RDConfig.h...
Generating code for file RDDepictor.h...
Generating code for file RDF.h...
Generating code for file RDKitBase.h...
Generating code for file RDKitFPGenerator.h...
Generating code for file RDKitQueries.h...
Generating code for file RDLog.h...
Generating code for file RDProps.h...
Generating code for file RDThreads.h...
Generating code for file RDValue-doublemagic.h...
Generating code for file RDValue-taggedunion.h...
Generating code for file RDValue.h...
Generating code for file Reaction.h...
Generating code for file ReactionFingerprints.h...
Generating code for file ReactionParser.h...
Generating code for file ReactionPickler.h...
Generating code for file ReactionRunner.h...
Generating code for file ReactionUtils.h...
Generating code for file ReCharge.h...
Generating code for file ReducedGraphs.h...
Generating code for file RegisterDescriptor.h...
Generating code for file Resonance.h...
Generating code for file RGroupDecomp.h...
Generating code for file RingInfo.h...
Generating code for file RingMatchTableSet.h...
Generating code for file Rings.h...
Generating code for file ROMol.h...
Generating code for file RWMol.h...
Generating code for file SanitException.h...
Generating code for file SanitizeRxn.h...
Generating code for file Seed.h...
Generating code for file SeedSet.h...
Generating code for file SequenceParsers.h...
Generating code for file SequenceWriters.h...
Generating code for file SetQuery.h...
Generating code for file ShapeEncoder.h...
Generating code for file ShapeUtils.h...
Generating code for file SLNAttribs.h...
Generating code for file SLNParse.h...
Generating code for file SLNParseOps.h...
Generating code for file SmartsWrite.h...
Generating code for file SmilesParse.h...
Generating code for file SmilesParseOps.h...
Generating code for file SmilesWrite.h...
Generating code for /<<PKGBUILDDIR>>/Code/DataStructs/BitOps.h:183: warning: found </tt> at different nesting level (7) than expected (4)
/<<PKGBUILDDIR>>/Code/DataStructs/BitOps.h:184: warning: end of comment block while expecting command </tt>
file Snapshot.h...
Generating code for file SparseBitVect.h...
Generating code for file SparseIntVect.h...
Generating code for file SquareMatrix.h...
Generating code for file Stereo.h...
Generating code for file StereoGroup.h...
Generating code for file StreamOps.h...
Generating code for file StretchBend.h...
Generating code for file StripSmallFragments.h...
Generating code for file StructChecker.h...
Generating code for file StructCheckerOptions.h...
Generating code for file Subgraphs.h...
Generating code for file SubgraphUtils.h...
Generating code for file SubstanceGroup.h...
Generating code for file SubstructLibrary.h...
Generating code for file SubstructLibrarySerialization.h...
Generating code for file SubstructMatch.h...
Generating code for file SubstructMatchCustom.h...
Generating code for file SubstructureCache.h...
Generating code for file SubstructUtils.h...
Generating code for file SymmMatrix.h...
Generating code for file Target.h...
Generating code for file TargetMatch.h...
Generating code for file Tautomer.h...
Generating code for file Tautomer.h...
Generating code for file TautomerCatalogEntry.h...
Generating code for file TautomerCatalogParams.h...
Generating code for file TautomerCatalogUtils.h...
Generating code for file TopologicalTorsionGenerator.h...
Generating code for file TorsionAngle.h...
Generating code for file TorsionAngle.h...
Generating code for file TorsionAngleM6.h...
Generating code for file TorsionConstraint.h...
Generating code for file TorsionConstraint.h...
Generating code for file TorsionPreferences.h...
Generating code for file Trajectory.h...
Generating code for file Transform.h...
Generating code for file Transform2D.h...
Generating code for file Transform3D.h...
Generating code for file TransformCatalogEntry.h...
Generating code for file TransformCatalogParams.h...
Generating code for file TransformCatalogUtils.h...
Generating code for file TriangleSmooth.h...
Generating code for file types.h...
Generating code for file UFF.h...
Generating code for file UniformGrid3D.h...
Generating code for file USRDescriptor.h...
Generating code for file Utilites.h...
Generating code for file Utils.h...
Generating code for file utils.h...
Generating code for file Validate.h...
Generating code for file Vector.h...
Generating code for file versions.h...
Generating code for file WHIM.h...
Generating code for file XOrQuery.h...
Generating file documentation...
Generating docs for file AcidBaseCatalogEntry.h...
Generating docs for file AcidBaseCatalogParams.h...
Generating docs for file AcidBaseCatalogUtils.h...
Generating docs for file AlignMolecules.h...
Generating docs for file AlignPoints.h...
Generating docs for file AndQuery.h...
Generating docs for file AngleBend.h...
Generating docs for file AngleBend.h...
Generating docs for file AngleConstraint.h...
Generating docs for file AngleConstraint.h...
Generating docs for file Atom.h...
Generating docs for file atomic_data.h...
Generating docs for file AtomIterators.h...
Generating docs for file AtomPairGenerator.h...
Generating docs for file AtomPairs.h...
Generating docs for file AtomTyper.h...
Generating docs for file AtomTyper.h...
Generating docs for file AUTOCORR2D.h...
Generating docs for file AUTOCORR3D.h...
Generating docs for file BadFileException.h...
Generating docs for file base64.h...
Generating docs for file BFGSOpt.h...
Generating docs for file BitOps.h...
Generating docs for file BitVect.h...
Generating docs for file BitVects.h...
Generating docs for file BitVectUtils.h...
Generating docs for file Bond.h...
Generating docs for file BondIterators.h...
Generating docs for file BondStretch.h...
Generating docs for file BondStretch.h...
Generating docs for file boost_numpy.h...
Generating docs for file BoostEndInclude.h...
Generating docs for file BoostStartInclude.h...
Generating docs for file BoundsMatrix.h...
Generating docs for file BoundsMatrixBuilder.h...
Generating docs for file Builder.h...
Generating docs for file Builder.h...
Generating docs for file Canon.h...
Generating docs for file CartesianProduct.h...
Generating docs for file Catalog.h...
Generating docs for file CatalogEntry.h...
Generating docs for file CatalogParams.h...
Generating docs for file Charge.h...
Generating docs for file ChemicalFeature.h...
Generating docs for file ChemTransforms.h...
Generating docs for file Chirality.h...
Generating docs for file ChiralSet.h...
Generating docs for file ChiralViolationContrib.h...
Generating docs for file Composition2N.h...
Generating docs for file Conformer.h...
Generating docs for file ConnectivityDescriptors.h...
Generating docs for file Conrec.h...
Generating docs for file Contrib.h...
Generating docs for file Contribs.h...
Generating docs for file Contribs.h...
Generating docs for file CorrMatGenerator.h...
Generating docs for file Crippen.h...
Generating docs for file Data3Ddescriptors.h...
Generating docs for file DatastructsException.h...
Generating docs for file DatastructsStreamOps.h...
Generating docs for file DebugTrace.h...
Generating docs for file DepictUtils.h...
Generating docs for file details.h...
Generating docs for file details.h...
Generating docs for file Dict.h...
Generating docs for file DiscreteDistMat.h...
Generating docs for file DiscreteValueVect.h...
Generating docs for file DistanceConstraint.h...
Generating docs for file DistanceConstraint.h...
Generating docs for file DistGeomUtils.h...
Generating docs for file DistPicker.h...
Generating docs for file DistViolationContrib.h...
Generating docs for file DuplicatedSeedCache.h...
Generating docs for file EEM.h...
Generating docs for file EmbeddedFrag.h...
Generating docs for file Embedder.h...
Generating docs for file Enumerate.h...
Generating docs for file EnumerateBase.h...
Generating docs for file EnumerateTypes.h...
Generating docs for file EnumerationPickler.h...
Generating docs for file EnumerationStrategyBase.h...
Generating docs for file EqualityQuery.h...
Generating docs for file EvenSamplePairs.h...
Generating docs for file Exceptions.h...
Generating docs for file ExplicitBitVect.h...
Generating docs for file export.h...
Generating docs for file Feature.h...
Generating docs for file FeatureParser.h...
Generating docs for file FFConvenience.h...
Generating docs for file FileParseException.h...
Generating docs for file FileParsers.h...
Generating docs for file FileParserUtils.h...
Generating docs for file FilterCatalog.h...
Generating docs for file FilterCatalogEntry.h...
Generating docs for file FilterMatcherBase.h...
Generating docs for file FilterMatchers.h...
Generating docs for file Filters.h...
Generating docs for file FingerprintGenerator.h...
Generating docs for file Fingerprints.h...
Generating docs for file FingerprintUtil.h...
Generating docs for file FMCS.h...
Generating docs for file ForceField.h...
Generating docs for file FourthDimContrib.h...
Generating docs for file FPBReader.h...
Generating docs for file FragCatalogEntry.h...
Generating docs for file FragCatalogUtils.h...
Generating docs for file FragCatGenerator.h...
Generating docs for file FragCatParams.h...
Generating docs for file FragFPGenerator.h...
Generating docs for file Fragment.h...
Generating docs for file FragmentCatalogEntry.h...
Generating docs for file FragmentCatalogParams.h...
Generating docs for file FragmentCatalogUtils.h...
Generating docs for file FreeChemicalFeature.h...
Generating docs for file FunctionalGroupHierarchy.h...
Generating docs for file GasteigerCharges.h...
Generating docs for file GasteigerParams.h...
Generating docs for file GETAWAY.h...
Generating docs for file Graph.h...
Generating docs for file GraphMol.h...
Generating docs for file GreaterEqualQuery.h...
Generating docs for file GreaterQuery.h...
Generating docs for file Grid3D.h...
Generating docs for file GridUtils.h...
Generating docs for file hanoiSort.h...
Generating docs for file HierarchicalClusterPicker.h...
Generating docs for file import_array.h...
Generating docs for file InfoBitRanker.h...
Generating docs for file InfoGainFuncs.h...
Generating docs for file Invariant.h...
Generating docs for file Inversion.h...
Generating docs for file iterator_next.h...
Generating docs for file/<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:500: warning: Found unknown command '\overloadquery'
/<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:509: warning: Found unknown command '\overloadquery'
 LeaderPicker.h...
Generating docs for file LessEqualQuery.h...
Generating docs for file LessQuery.h...
Generating docs for file Lipinski.h...
Generating docs for file LocaleSwitcher.h...
Generating docs for file MACCS.h...
Generating docs for file MatchTable.h...
Generating docs for file Matrix.h...
Generating docs for file MaximumCommonSubgraph.h...
Generating docs for file MaxMinPicker.h...
Generating docs for file Metal.h...
Generating docs for file MetricFuncs.h...
Generating docs for file MetricMatrixCalc.h...
Generating docs for file mf.h...
Generating docs for file MMFF.h...
Generating docs for file MMPA.h...
Generating docs for file MolBundle.h...
Generating docs for file MolCatalog.h...
Generating docs for file MolCatalogEntry.h...
Generating docs for file MolCatalogParams.h...
Generating docs for file MolChemicalFeature.h...
Generating docs for file MolChemicalFeatureDef.h...
Generating docs for file MolChemicalFeatureFactory.h...
Generating docs for file MolData3Ddescriptors.h...
Generating docs for file MolDescriptors.h...
Generating docs for file MolDescriptors3D.h...
Generating docs for file MolDraw2D.h...
Generating docs for file MolDraw2DCairo.h...
Generating docs for file MolDraw2DDetails.h...
Generating docs for file MolDraw2DQt.h...
Generating docs for file MolDraw2DSVG.h...
Generating docs for file MolDraw2DUtils.h...
Generating docs for file MolDraw2Dwx.h...
Generating docs for file MolFileStereochem.h...
Generating docs for file MolFragmenter.h...
Generating docs for file MolHash.h...
Generating docs for file MolInterchange.h...
Generating docs for file MolOps.h...
Generating docs for file MolPickler.h...
Generating docs for file MolSGroupParsing.h...
Generating docs for file MolSGroupWriting.h...
Generating docs for file MolStandardize.h...
Generating docs for file MolSupplier.h...
Generating docs for file MolSurf.h...
Generating docs for file MolTransforms.h...
Generating docs for file MolWriters.h...
Generating docs for file MonomerInfo.h...
Generating docs for file MorganFingerprints.h...
Generating docs for file MorganGenerator.h...
Generating docs for file MORSE.h...
Generating docs for file MQN.h...
Generating docs for file MultiFPBReader.h...
Generating docs for file MultiMolDraw2D.h...
Generating docs for file new_canon.h...
Generating docs for file nmmolhash.h...
Generating docs for file Nonbonded.h...
Generating docs for file Nonbonded.h...
Generating docs for file Normalize.h...
Generating docs for file NullQueryAlgebra.h...
Generating docs for file O3AAlignMolecules.h...
Generating docs for file OopBend.h...
Generating docs for file OrQuery.h...
Generating docs for file Params.h...
Generating docs for file Params.h...
Generating docs for file Pattern.h...
Generating docs for file PBF.h...
Generating docs for file PeriodicTable.h...
Generating docs for file PMI.h...
Generating docs for file point.h...
Generating docs for file PositionConstraint.h...
Generating docs for file PositionConstraint.h...
Generating docs for file PowerEigenSolver.h...
Generating docs for file PreprocessRxn.h...
Generating docs for file primes.h...
Generating docs for file Property.h...
Generating docs for file ProximityBonds.h...
Generating docs for file pyint_api.h...
Generating docs for file PySequenceHolder.h...
Generating docs for file python.h...
Generating docs for file python_streambuf.h...
Generating docs for file Query.h...
Generating docs for file QueryAtom.h...
Generating docs for file QueryBond.h...
Generating docs for file QueryObjects.h...
Generating docs for file QueryOps.h...
Generating docs for file RandomSample.h...
Generating docs for file RandomSampleAllBBs.h...
Generating docs for file RangeQuery.h...
Generating docs for file Ranking.h...
Generating docs for file RDAny.h...
Generating docs for file RDConfig.h...
Generating docs for file RDDepictor.h...
Generating docs for file RDF.h...
Generating docs for file RDKitBase.h...
Generating docs for file RDKitFPGenerator.h...
Generating docs for file RDKitQueries.h...
Generating docs for file RDLog.h...
Generating docs for file RDProps.h...
Generating docs for file RDThreads.h...
Generating docs for file RDValue-doublemagic.h...
Generating docs for file RDValue-taggedunion.h...
Generating docs for file RDValue.h...
Generating docs for file Reaction.h...
Generating docs for file ReactionFingerprints.h...
Generating docs for file ReactionParser.h...
Generating docs for file ReactionPickler.h...
Generating docs for file ReactionRunner.h...
Generating docs for file ReactionUtils.h...
Generating docs for file ReCharge.h...
Generating docs for file ReducedGraphs.h...
Generating docs for file RegisterDescriptor.h...
Generating docs for file Resonance.h...
Generating docs for file RGroupDecomp.h...
Generating docs for file RingInfo.h...
Generating docs for file RingMatchTableSet.h...
Generating docs for file Rings.h...
Generating docs for file ROMol.h...
Generating docs for file RWMol.h...
Generating docs for file SanitException.h...
Generating docs for file SanitizeRxn.h...
Generating docs for file Seed.h...
Generating docs for file SeedSet.h...
Generating docs for file SequenceParsers.h...
Generating docs for file SequenceWriters.h...
Generating docs for file SetQuery.h...
Generating docs for file ShapeEncoder.h...
Generating docs for file ShapeUtils.h...
Generating docs for file SLNAttribs.h...
Generating docs for file SLNParse.h...
Generating docs for file SLNParseOps.h...
Generating docs for file SmartsWrite.h...
Generating docs for file SmilesParse.h...
Generating docs for file SmilesParseOps.h...
Generating docs for file SmilesWrite.h...
Generating docs for file Snapshot.h...
Generating docs for file SparseBitVect.h...
Generating docs for file SparseIntVect.h...
Generating docs for file SquareMatrix.h...
Generating docs for file Stereo.h...
Generating docs for file StereoGroup.h...
Generating docs for file StreamOps.h...
Generating docs for file StretchBend.h...
Generating docs for file StripSmallFragments.h...
Generating docs for file StructChecker.h...
Generating docs for file StructCheckerOptions.h...
Generating docs for file Subgraphs.h...
Generating docs for file SubgraphUtils.h...
Generating docs for file SubstanceGroup.h...
Generating docs for file SubstructLibrary.h...
Generating docs for file SubstructLibrarySerialization.h...
Generating docs for file SubstructMatch.h...
Generating docs for file SubstructMatchCustom.h...
Generating docs for file SubstructureCache.h...
Generating docs for file SubstructUtils.h...
Generating docs for file SymmMatrix.h...
Generating docs for file Target.h...
Generating docs for file TargetMatch.h...
Generating docs for file Tautomer.h...
Generating docs for file Tautomer.h...
Generating docs for file TautomerCatalogEntry.h...
Generating docs for file TautomerCatalogParams.h...
Generating docs for file TautomerCatalogUtils.h...
Generating docs for file TopologicalTorsionGenerator.h...
Generating docs for file TorsionAngle.h...
Generating docs for file TorsionAngle.h...
Generating docs for file TorsionAngleM6.h...
Generating docs for file TorsionConstraint.h...
Generating docs for file TorsionConstraint.h...
Generating docs for file TorsionPreferences.h...
Generating docs for file Trajectory.h...
Generating docs for file Transform.h...
Generating docs for file Transform2D.h...
Generating docs for file Transform3D.h...
Generating docs for file TransformCatalogEntry.h...
Generating docs for file TransformCatalogParams.h...
Generating docs for file TransformCatalogUtils.h...
Generating docs for file TriangleSmooth.h...
Generating docs for file types.h...
Generating docs for file UFF.h...
Generating docs for file UniformGrid3D.h...
Generating docs for file USRDescriptor.h...
Generating docs for file Utilites.h...
Generating docs for file Utils.h...
Generating docs for file utils.h...
Generating docs for file Validate.h...
Generating docs for file Vector.h...
Generating docs for file versions.h...
Generating docs for file WHIM.h...
Generating docs for file XOrQuery.h...
Generating page documentation...
Generating docs for page deprecated...
Generating group documentation...
Generating class documentation...
Generating docs for co/<<PKGBUILDDIR>>/Code/DistGeom/DistGeomUtils.h:118: warning: The following parameter of DistGeom::constructForceField(const BoundsMatrix &mmat, RDGeom::PointPtrVect &positions, const VECT_CHIRALSET &csets, double weightChiral=1.0, double weightFourthDim=0.1, std::map< std::pair< int, int >, double > *extraWeights=0, double basinSizeTol=5.0, boost::dynamic_bitset<> *fixedPts=nullptr) is not documented:
  parameter 'fixedPts'
/<<PKGBUILDDIR>>/Code/ForceField/ForceField.h:159: warning: argument 'snapshotFreq' of command @param is not found in the argument list of ForceFields::ForceField::minimize(unsigned int maxIts=200, double forceTol=1e-4, double energyTol=1e-6)
/<<PKGBUILDDIR>>/Code/ForceField/ForceField.h:159: warning: argument 'snapshotVect' of command @param is not found in the argument list of ForceFields::ForceField::minimize(unsigned int maxIts=200, double forceTol=1e-4, double energyTol=1e-6)
/<<PKGBUILDDIR>>/Code/ForceField/ForceField.h:154: warning: The following parameters of ForceFields::ForceField::minimize(unsigned int snapshotFreq, RDKit::SnapshotVect *snapshotVect, unsigned int maxIts=200, double forceTol=1e-4, double energyTol=1e-6) are not documented:
  parameter 'snapshotFreq'
  parameter 'snapshotVect'
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/AngleBend.h:30: warning: argument 'angleType' of command @param is not found in the argument list of ForceFields::MMFF::AngleBendContrib::AngleBendContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, const MMFFAngle *mmffAngleParams, const MMFFProp *mmffPropParamsCentralAtom)
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/AngleBend.h:40: warning: The following parameters of ForceFields::MMFF::AngleBendContrib::AngleBendContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, const MMFFAngle *mmffAngleParams, const MMFFProp *mmffPropParamsCentralAtom) are not documented:
  parameter 'mmffAngleParams'
  parameter 'mmffPropParamsCentralAtom'
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/AngleConstraint.h:27: warning: argument 'minAngle' of command @param is not found in the argument list of ForceFields::MMFF::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst)
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/AngleConstraint.h:27: warning: argument 'maxAngle' of command @param is not found in the argument list of ForceFields::MMFF::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst)
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/AngleConstraint.h:37: warning: The following parameters of ForceFields::MMFF::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst) are not documented:
  parameter 'minAngleDeg'
  parameter 'maxAngleDeg'
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/BondStretch.h:27: warning: argument 'bondType' of command @param is not found in the argument list of ForceFields::MMFF::BondStretchContrib::BondStretchContrib(ForceField *owner, const unsigned int idx1, const unsigned int idx2, const MMFFBond *mmffBondParams)
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/BondStretch.h:27: warning: argument 'end1Params' of command @param is not found in the argument list of ForceFields::MMFF::BondStretchContrib::BondStretchContrib(ForceField *owner, const unsigned int idx1, const unsigned int idx2, const MMFFBond *mmffBondParams)
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/BondStretch.h:27: warning: argument 'end2Params' of command @param is not found in the argument list of ForceFields::MMFF::BondStretchContrib::BondStretchContrib(ForceField *owner, const unsigned int idx1, const unsigned int idx2, const MMFFBond *mmffBondParams)
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/BondStretch.h:36: warning: The following parameter of ForceFields::MMFF::BondStretchContrib::BondStretchContrib(ForceField *owner, const unsigned int idx1, const unsigned int idx2, const MMFFBond *mmffBondParams) is not documented:
  parameter 'mmffBondParams'
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/Nonbonded.h:59: warning: The following parameters of ForceFields::MMFF::EleContrib::EleContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, double chargeTerm, std::uint8_t dielModel, bool is1_4) are not documented:
  parameter 'chargeTerm'
  parameter 'dielModel'
  parameter 'is1_4'
mpound BitVect...
Generating docs for compound Data3Ddescriptors...
Generating docs for compound DatastructsException...
Generating docs for compound ExplicitBitVect...
Generating docs for compound IndexErrorException...
Generating docs for compound KeyErrorException...
Generating docs for compound MolData3Ddescriptors...
Generating docs for compound PySequenceHolder...
Generating docs for compound SparseBitVect...
Generating docs for compound ValueErrorException...
Generating namespace index...
Generating docs for namespace BFGSOpt
Generating docs for namespace boost
Generating docs for namespace boost::logging
Generating docs for compound boost::logging::rdLogger...
Generating docs for namespace boost_adaptbx
Generating docs for namespace boost_adaptbx::python
Generating docs for compound boost_adaptbx::python::ostream...
Generating docs for compound boost_adaptbx::python::streambuf...
Generating docs for nested compound boost_adaptbx::python::streambuf::istream...
Generating docs for nested compound boost_adaptbx::python::streambuf::ostream...
Generating docs for compound boost_adaptbx::python::streambuf_capsule...
Generating docs for namespace ChemicalFeatures
Generating docs for compound ChemicalFeatures::ChemicalFeature...
Generating docs for compound ChemicalFeatures::FreeChemicalFeature...
Generating docs for namespace conrec
Generating docs for compound conrec::ConrecSegment...
Generating docs for namespace DistGeom
Generating docs for compound DistGeom::BoundsMatrix...
Generating docs for compound DistGeom::ChiralSet...
Generating docs for compound DistGeom::ChiralViolationContrib...
Generating docs for compound DistGeom::DistViolationContrib...
Generating docs for compound DistGeom::FourthDimContrib...
Generating docs for namespace ForceFields
Generating docs for compound ForceFields::ForceField...
Generating docs for compound ForceFields::ForceFieldContrib...
Generating docs for namespace ForceFields::CrystalFF
Generating docs for compound ForceFields::CrystalFF::CrystalFFDetails...
Generating docs for compound ForceFields::CrystalFF::TorsionAngleContribM6...
Generating docs for namespace ForceFields::MMFF
Generating docs for compound ForceFields::MMFF::AngleBendContrib...
Generating docs for compound ForceFields::MMFF::AngleConstraintContrib...
Generating docs for compound ForceFields::MMFF::BondStretchContrib...
Generating docs for compound ForceFields::MMFF::DistanceConstraintContrib...
Generating docs for compound ForceFields::MMFF::EleContrib...
Generating docs for compound ForceFields::MMFF::MMFFAngle...
Generating docs for compound ForceFields::MMFF::MMFFAngleCollection...
Generating docs for compound ForceFields::MMFF::MMFFAromCollection...
Generating docs for compound ForceFields::MMFF::MMFFBndkCollection...
Generating docs for compound ForceFields::MMFF::MMFFBond...
Generating docs for compound ForceFields::MMFF::MMFFBondCollection...
Generating docs for compound ForceFields::MMFF::MMFFChg...
Generating docs for compound ForceFields::MMFF::MMFFChgCollection...
Generating docs for compound ForceFields::MMFF::MMFFCovRadPauEle...
Generating docs for compound ForceFields::MMFF::MMFFCovRadPauEleCollection...
Generating docs for compound ForceFields::MMFF::MMFFDef...
Generating docs for compound ForceFields::MMFF::MMFFDefCollection...
Generating docs for compound ForceFields::MMFF::MMFFDfsbCollection...
Generating docs for compound ForceFields::MMFF::MMFFHerschbachLaurie...
Generating docs for compound ForceFields::MMFF::MMFFHerschbachLaurieCollection...
Generating docs for compound ForceFields::MMFF::MMFFOop...
Generating docs for compound ForceFields::MMFF::MMFFOopCollection...
Generating docs for compound ForceFields::MMFF::MMFFPBCI...
Generating docs for compound ForceFields::MMFF::MMFFPBCICollection...
Generating docs for compound ForceFields::MMFF::MMFFProp...
Generating docs for compound ForceFields::MMFF::MMFFPropCollection...
Generating docs for compound ForceFields::MMFF::MMFFStbn...
Generating docs for compound ForceFields::MMFF::MMFFStbnCollection...
Generating docs for compound ForceFields::M/<<PKGBUILDDIR>>/Code/ForceField/MMFF/PositionConstraint.h:28: warning: argument 'minDispl' of command @param is not found in the argument list of ForceFields::MMFF::PositionConstraintContrib::PositionConstraintContrib(ForceField *owner, unsigned int idx, double maxDispl, double forceConst)
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/StretchBend.h:31: warning: argument 'angleType' of command @param is not found in the argument list of ForceFields::MMFF::StretchBendContrib::StretchBendContrib(ForceField *owner, const unsigned int idx1, const unsigned int idx2, const unsigned int idx3, const MMFFStbn *mmffStbnParams, const MMFFAngle *mmffAngleParams, const MMFFBond *mmffBondParams1, const MMFFBond *mmffBondParams2)
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/StretchBend.h:41: warning: The following parameters of ForceFields::MMFF::StretchBendContrib::StretchBendContrib(ForceField *owner, const unsigned int idx1, const unsigned int idx2, const unsigned int idx3, const MMFFStbn *mmffStbnParams, const MMFFAngle *mmffAngleParams, const MMFFBond *mmffBondParams1, const MMFFBond *mmffBondParams2) are not documented:
  parameter 'mmffStbnParams'
  parameter 'mmffAngleParams'
  parameter 'mmffBondParams1'
  parameter 'mmffBondParams2'
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/TorsionAngle.h:34: warning: argument 'torsionType' of command @param is not found in the argument list of ForceFields::MMFF::TorsionAngleContrib::TorsionAngleContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, unsigned int idx4, const MMFFTor *mmffTorParams)
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/TorsionAngle.h:46: warning: The following parameter of ForceFields::MMFF::TorsionAngleContrib::TorsionAngleContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, unsigned int idx4, const MMFFTor *mmffTorParams) is not documented:
  parameter 'mmffTorParams'
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/Nonbonded.h:35: warning: The following parameter of ForceFields::MMFF::VdWContrib::VdWContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, const MMFFVdWRijstarEps *mmffVdWConstants) is not documented:
  parameter 'mmffVdWConstants'
/<<PKGBUILDDIR>>/Code/ForceField/UFF/AngleConstraint.h:27: warning: argument 'minAngle' of command @param is not found in the argument list of ForceFields::UFF::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst)
/<<PKGBUILDDIR>>/Code/ForceField/UFF/AngleConstraint.h:27: warning: argument 'maxAngle' of command @param is not found in the argument list of ForceFields::UFF::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst)
/<<PKGBUILDDIR>>/Code/ForceField/UFF/AngleConstraint.h:37: warning: The following parameters of ForceFields::UFF::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst) are not documented:
  parameter 'minAngleDeg'
  parameter 'maxAngleDeg'
/<<PKGBUILDDIR>>/Code/ForceField/UFF/Inversion.h:39: warning: The following parameter of ForceFields::UFF::InversionContrib::InversionContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, unsigned int idx4, int at2AtomicNum, bool isCBoundToO, double oobForceScalingFactor=1.0) is not documented:
  parameter 'oobForceScalingFactor'
/<<PKGBUILDDIR>>/Code/ForceField/UFF/PositionConstraint.h:28: warning: argument 'minDispl' of command @param is not found in the argument list of ForceFields::UFF::PositionConstraintContrib::PositionConstraintContrib(ForceField *owner, unsigned int idx, double maxDispl, double forceConst)
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.h:73: warning: The following parameter of RDDepict::compute2DCoords(RDKit::ROMol &mol, const RDGeom::INT_POINT2D_MAP *coordMap=0, bool canonOrient=false, bool clearConfs=true, unsigned int nFlipsPerSample=0, unsigned int nSamples=0, int sampleSeed=0, bool permuteDeg4Nodes=false, bool forceRDKit=false) is not documented:
  parameter 'forceRDKit'
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.h:128: warning: The following parameter of RDDepict::compute2DCoordsMimicDistMat(RDKit::ROMol &mol, const DOUBLE_SMART_PTR *dmat=0, bool canonOrient=true, bool clearConfs=true, double weightDistMat=0.5, unsigned int nFlipsPerSample=3, unsigned int nSamples=100, int sampleSeed=25, bool permuteDeg4Nodes=true, bool forceRDKit=false) is not documented:
  parameter 'forceRDKit'
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.h:160: warning: The following parameter of RDDepict::generateDepictionMatching2DStructure(RDKit::ROMol &mol, const RDKit::ROMol &reference, int confId=-1, RDKit::ROMol *referencePattern=static_cast< RDKit::ROMol * >(0), bool acceptFailure=false, bool forceRDKit=false) is not documented:
  parameter 'forceRDKit'
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.h:167: warning: argument 'refPattern' of command @param is not found in the argument list of RDDepict::generateDepictionMatching3DStructure(RDKit::ROMol &mol, const RDKit::ROMol &reference, int confId=-1, RDKit::ROMol *referencePattern=0, bool acceptFailure=false, bool forceRDKit=false)
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.h:187: warning: The following parameters of RDDepict::generateDepictionMatching3DStructure(RDKit::ROMol &mol, const RDKit::ROMol &reference, int confId=-1, RDKit::ROMol *referencePattern=0, bool acceptFailure=false, bool forceRDKit=false) are not documented:
  parameter 'referencePattern'
  parameter 'forceRDKit'
MFF::MMFFTor...
Generating docs for compound ForceFields::MMFF::MMFFTorCollection...
Generating docs for compound ForceFields::MMFF::MMFFVdW...
Generating docs for compound ForceFields::MMFF::MMFFVdWCollection...
Generating docs for compound ForceFields::MMFF::MMFFVdWRijstarEps...
Generating docs for compound ForceFields::MMFF::OopBendContrib...
Generating docs for compound ForceFields::MMFF::PositionConstraintContrib...
Generating docs for compound ForceFields::MMFF::StretchBendContrib...
Generating docs for compound ForceFields::MMFF::TorsionAngleContrib...
Generating docs for compound ForceFields::MMFF::TorsionConstraintContrib...
Generating docs for compound ForceFields::MMFF::VdWContrib...
Generating docs for namespace ForceFields::MMFF::Utils
Generating docs for namespace ForceFields::UFF
Generating docs for compound ForceFields::UFF::AngleBendContrib...
Generating docs for compound ForceFields::UFF::AngleConstraintContrib...
Generating docs for compound ForceFields::UFF::AtomicParams...
Generating docs for compound ForceFields::UFF::BondStretchContrib...
Generating docs for compound ForceFields::UFF::DistanceConstraintContrib...
Generating docs for compound ForceFields::UFF::InversionContrib...
Generating docs for compound ForceFields::UFF::ParamCollection...
Generating docs for compound ForceFields::UFF::PositionConstraintContrib...
Generating docs for compound ForceFields::UFF::TorsionAngleContrib...
Generating docs for compound ForceFields::UFF::TorsionConstraintContrib...
Generating docs for compound ForceFields::UFF::UFFAngle...
Generating docs for compound ForceFields::UFF::UFFBond...
Generating docs for compound ForceFields::UFF::UFFInv...
Generating docs for compound ForceFields::UFF::UFFTor...
Generating docs for compound ForceFields::UFF::UFFVdW...
Generating docs for compound ForceFields::UFF::vdWContrib...
Generating docs for namespace ForceFields::UFF::Params
Generating docs for namespace ForceFields::UFF::Utils
Generating docs for namespace Invar
Generating docs for compound Invar::Invariant...
Generating docs for namespace MolTransforms
Generating docs for namespace Queries
Generating docs for compound Queries::AndQuery...
Generating docs for compound Queries::EqualityQuery...
Generating docs for compound Queries::GreaterEqualQuery...
Generating docs for compound Queries::GreaterQuery...
Generating docs for compound Queries::Int2Type...
Generating docs for compound Queries::LessEqualQuery...
Generating docs for compound Queries::LessQuery...
Generating docs for compound Queries::OrQuery...
Generating docs for compound Queries::Query...
Generating docs for compound Queries::RangeQuery...
Generating docs for compound Queries::SetQuery...
Generating docs for compound Queries::XOrQuery...
Generating docs for namespace Rankers
Generating docs for compound Rankers::argless...
Generating docs for compound Rankers::pairGreater...
Generating docs for compound Rankers::pairLess...
Generating docs for namespace RDCatalog
Generating docs for compound RDCatalog::Catalog...
Generating docs for compound RDCatalog::CatalogEntry...
Generating docs for compound RDCatalog::CatalogParams...
Generating docs for compound RDCatalog::HierarchCatalog...
Generating docs for nested compound RDCatalog::HierarchCatalog::vertex_entry_t...
Generating docs for namespace RDDataManip
Generating docs for compound RDDataManip::MetricMatrixCalc...
Generating docs for namespace RDDepict
Generating docs for compound RDDepict::DepictException...
Generating docs for compound RDDepict::EmbeddedAtom...
Generating docs for compound RDDepict::EmbeddedFrag...
Generating docs for compound RDDepict::gtIIPair...
Generating docs for namespace RDFeatures
Generating docs for compound RDFeatures::ExplicitFeature...
Generating docs for compound RDFeatures::ImplicitFeature...
Generating docs for namespace RDGeom
Generating docs for compound RDGeom::Grid3D...
Generating docs for compound RDGeom::GridException...
Generating docs for compound RDGeom::Point...
Generating docs for compound RDGeom::Point2D...
Generating docs for compound RDGeom::Point3D...
Ge/<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:500: warning: Found unknown command '\overloadquery'
/<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:509: warning: Found unknown command '\overloadquery'
/<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.h:197: warning: The following parameter of RDKit::addSubstanceGroup(ROMol &mol, SubstanceGroup sgroup) is not documented:
  parameter 'mol'
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SequenceParsers.h:104: warning: argument 'seq' of command @param is not found in the argument list of RDKit::HELMToMol(const char *helm, bool sanitize=true)
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SequenceParsers.h:110: warning: The following parameter of RDKit::HELMToMol(const char *helm, bool sanitize=true) is not documented:
  parameter 'helm'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.h:105: warning: The following parameter of RDKit::LayeredFingerprintMol(const ROMol &mol, unsigned int layerFlags=0xFFFFFFFF, unsigned int minPath=1, unsigned int maxPath=7, unsigned int fpSize=2048, std::vector< unsigned int > *atomCounts=0, ExplicitBitVect *setOnlyBits=0, bool branchedPaths=true, const std::vector< std::uint32_t > *fromAtoms=0) is not documented:
  parameter 'fromAtoms'
/<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:500: warning: Found unknown command '\overloadquery'
/<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:509: warning: Found unknown command '\overloadquery'
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:60: warning: argument 'line' from the argument list of RDKit::MolDataStreamToMol has multiple @param documentation sections
/<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesWrite.h:126: warning: The following parameter of RDKit::MolToCXSmiles(const ROMol &mol, bool doIsomericSmiles=true, bool doKekule=false, int rootedAtAtom=-1, bool canonical=true, bool allBondsExplicit=false, bool allHsExplicit=false, bool doRandom=false) is not documented:
  parameter 'doRandom'
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:286: warning: argument 'fName' of command @param is not found in the argument list of RDKit::MolToPDBFile(const ROMol &mol, const std::string &fname, int confId=-1, unsigned int flavor=0)
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:298: warning: The following parameter of RDKit::MolToPDBFile(const ROMol &mol, const std::string &fname, int confId=-1, unsigned int flavor=0) is not documented:
  parameter 'fname'
/<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesWrite.h:75: warning: The following parameter of RDKit::MolToSmiles(const ROMol &mol, bool doIsomericSmiles=true, bool doKekule=false, int rootedAtAtom=-1, bool canonical=true, bool allBondsExplicit=false, bool allHsExplicit=false, bool doRandom=false) is not documented:
  parameter 'doRandom'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.h:24: warning: argument 'useBondOrders' of command @param is not found in the argument list of RDKit::RDKFingerprintMol(const ROMol &mol, unsigned int minPath=1, unsigned int maxPath=7, unsigned int fpSize=2048, unsigned int nBitsPerHash=2, bool useHs=true, double tgtDensity=0.0, unsigned int minSize=128, bool branchedPaths=true, bool useBondOrder=true, std::vector< std::uint32_t > *atomInvariants=0, const std::vector< std::uint32_t > *fromAtoms=0, std::vector< std::vector< std::uint32_t >> *atomBits=0, std::map< std::uint32_t, std::vector< std::vector< int >>> *bitInfo=0)
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.h:53: warning: The following parameters of RDKit::RDKFingerprintMol(const ROMol &mol, unsigned int minPath=1, unsigned int maxPath=7, unsigned int fpSize=2048, unsigned int nBitsPerHash=2, bool useHs=true, double tgtDensity=0.0, unsigned int minSize=128, bool branchedPaths=true, bool useBondOrder=true, std::vector< std::uint32_t > *atomInvariants=0, const std::vector< std::uint32_t > *fromAtoms=0, std::vector< std::vector< std::uint32_t >> *atomBits=0, std::map< std::uint32_t, std::vector< std::vector< int >>> *bitInfo=0) are not documented:
  parameter 'useBondOrder'
  parameter 'bitInfo'
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionRunner.h:97: warning: The following parameter of RDKit::reduceProductToSideChains(const ROMOL_SPTR &product, bool addDummyAtoms=true) is not documented:
  parameter 'product'
/<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/ChemTransforms.h:113: warning: argument 'useChirality' of command @param is not found in the argument list of RDKit::replaceCore(const ROMol &mol, const ROMol &core, const MatchVectType &matchVect, bool replaceDummies=true, bool labelByIndex=false, bool requireDummyMatch=false)
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionRunner.h:63: warning: argument 'reactantTemplateIdx' of command @param is not found in the argument list of RDKit::run_Reactant(const ChemicalReaction &rxn, const ROMOL_SPTR &reactant, unsigned int reactantIdx)
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionRunner.h:77: warning: The following parameters of RDKit::run_Reactant(const ChemicalReaction &rxn, const ROMOL_SPTR &reactant, unsigned int reactantIdx) are not documented:
  parameter 'rxn'
  parameter 'reactantIdx'
/<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.h:55: warning: argument 'matchParams' of command @param is not found in the argument list of RDKit::SubstructMatch(const ROMol &mol, const ROMol &query, const SubstructMatchParameters &params=SubstructMatchParameters())
/<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.h:63: warning: The following parameter of RDKit::SubstructMatch(const ROMol &mol, const ROMol &query, const SubstructMatchParameters &params=SubstructMatchParameters()) is not documented:
  parameter 'params'
/<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.h:68: warning: argument 'matchParams' of command @param is not found in the argument list of RDKit::SubstructMatch(ResonanceMolSupplier &resMolSuppl, const ROMol &query, const SubstructMatchParameters &params=SubstructMatchParameters())
/<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.h:76: warning: The following parameter of RDKit::SubstructMatch(ResonanceMolSupplier &resMolSuppl, const ROMol &query, const SubstructMatchParameters &params=SubstructMatchParameters()) is not documented:
  parameter 'params'
/<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.h:145: warning: The following parameter of RDKit::SubstructMatch(T1 &mol, const T2 &query, std::vector< MatchVectType > &matchVect, bool uniquify=true, bool recursionPossible=true, bool useChirality=false, bool useQueryQueryMatches=false, unsigned int maxMatches=1000, int numThreads=1) is not documented:
  parameter 'numThreads'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintGenerator.h:109: warning: The following parameter of RDKit::AtomEnvironment::getBitId(FingerprintArguments< OutputType > *arguments, const std::vector< std::uint32_t > *atomInvariants, const std::vector< std::uint32_t > *bondInvariants, const AdditionalOutput *AdditionalOutput, const bool hashResults=false) const=0 is not documented:
  parameter 'AdditionalOutput'
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h:206: warning: argument 'maxProducts' of command @param is not found in the argument list of RDKit::ChemicalReaction::runReactants(const MOL_SPTR_VECT reactants, unsigned int numProducts=1000) const
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h:222: warning: The following parameter of RDKit::ChemicalReaction::runReactants(const MOL_SPTR_VECT reactants, unsigned int numProducts=1000) const is not documented:
  parameter 'numProducts'
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h:415: warning: argument 'matches' of command @param is not found in the argument list of RDKit::ExclusionList::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const inherited from member getMatches at line 98 in file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h:415: warning: The following parameter of RDKit::ExclusionList::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const is not documented:
  parameter 'matchVect'
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h:98: warning: argument 'matches' of command @param is not found in the argument list of RDKit::FilterMatcherBase::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const=0
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h:105: warning: The following parameter of RDKit::FilterMatcherBase::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const=0 is not documented:
  parameter 'matchVect'
nerating docs for compound RDGeom::PointND...
Generating docs for compound RDGeom::Transform2D...
Generating docs for compound RDGeom::Transform3D...
Generating docs for compound RDGeom::UniformGrid3D...
Generating docs for namespace RDInfoTheory
Generating docs for compound RDInfoTheory::BitCorrMatGenerator...
Generating docs for compound RDInfoTheory::InfoBitRanker...
Generating docs for namespace RDKit
Generating docs for compound RDKit::AdditionalOutput...
Generating docs for compound RDKit::AromaticAtomIterator_...
Generating docs for compound RDKit::Atom...
Generating docs for compound RDKit::AtomEnvironment...
Generating docs for compound RDKit::AtomEnvironmentGenerator...
Generating docs for compound RDKit::atomicData...
Generating docs for compound RDKit::AtomInvariantsGenerator...
Generating docs for compound RDKit::AtomIterator_...
Generating docs for compound RDKit::AtomKekulizeException...
Generating docs for compound RDKit::AtomMonomerInfo...
Generating docs for compound RDKit::AtomPDBResidueInfo...
Generating docs for compound RDKit::AtomRingQuery...
Generating docs for compound RDKit::AtomSanitizeException...
Generating docs for compound RDKit::AtomValenceException...
Generating docs for compound RDKit::BadFileException...
Generating docs for compound RDKit::Bond...
Generating docs for compound RDKit::BondInvariantsGenerator...
Generating docs for compound RDKit::BondIterator_...
Generating docs for compound RDKit::CachedMolHolder...
Generating docs for compound RDKit::CachedSmilesMolHolder...
Generating docs for compound RDKit::CachedTrustedSmilesMolHolder...
Generating docs for compound RDKit::CartesianProductStrategy...
Generating docs for compound RDKit::charptr_functor...
Generating docs for compound RDKit::ChemicalReaction...
Generating docs for compound RDKit::ChemicalReactionException...
Generating docs for compound RDKit::ChemicalReactionParserException...
Generating docs for compound RDKit::Conformer...
Generating docs for compound RDKit::ConformerException...
Generating docs for compound RDKit::ConstBondIterator_...
Generating docs for compound RDKit::CustomPropHandler...
Generating docs for compound RDKit::CXXAtomIterator...
Generating docs for nested compound RDKit::CXXAtomIterator::CXXAtomIter...
Generating docs for compound RDKit::CXXBondIterator...
Generating docs for nested compound RDKit::CXXBondIterator::CXXBondIter...
Generating docs for compound RDKit::DataStructsExplicitBitVecPropHandler...
Generating docs for compound RDKit::Dict...
Generating docs for nested compound RDKit::Dict::Pair...
Generating docs for compound RDKit::DiscreteDistMat...
Generating docs for compound RDKit::DiscreteValueVect...
Generating docs for compound RDKit::DrawColour...
Generating docs for compound RDKit::EnumerateLibrary...
Generating docs for compound RDKit::EnumerateLibraryBase...
Generating docs for compound RDKit::EnumerationParams...
Generating docs for compound RDKit::EnumerationStrategyBase...
Generating docs for compound RDKit::EnumerationStrategyException...
Generating docs for compound RDKit::EvenSamplePairsStrategy...
Generating docs for compound RDKit::ExclusionList...
Generating docs for compound RDKit::FeatureFileParseException...
Generating docs for compound RDKit::FileParseException...
Generating docs for compound RDKit::FilterCatalog...
Generating docs for compound RDKit::FilterCatalogEntry...
Generating docs for compound RDKit::FilterCatalogParams...
Generating docs for compound RDKit::FilterData_t...
Generating docs for compound RDKit::FilterHierarchyMatcher...
Generating docs for compound RDKit::FilterMatch...
Generating docs for compound RDKit::FilterMatcherBase...
Generating docs for compound RDKit::FilterProperty_t...
Generating docs for compound RDKit::FingerprintArguments...
Generating docs for compound RDKit::FingerprintGenerator...
Generating docs for compound RDKit::ForwardSDMolSupplier...
Generating docs for compound RDKit::FPBReader...
Generating docs for compound RDKit::FPHolderBase...
Generating docs for compound RDKit::FragCatalogEntry...
Generating docs for compound RDKi/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:222: warning: argument 'highlight_atoms' from the argument list of RDKit::MolDraw2D::drawMolecule has multiple @param documentation sections
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:222: warning: The following parameter of RDKit::MolDraw2D::drawMolecule(const ROMol &mol, const std::string &legend, const std::vector< int > *highlight_atoms, const std::vector< int > *highlight_bonds, const std::map< int, DrawColour > *highlight_atom_map=nullptr, const std::map< int, DrawColour > *highlight_bond_map=nullptr, const std::map< int, double > *highlight_radii=nullptr, int confId=-1) is not documented:
  parameter 'highlight_bonds'
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:252: warning: argument 'highlight_atom_map' of command @param is not found in the argument list of RDKit::MolDraw2D::drawMolecules(const std::vector< ROMol * > &mols, const std::vector< std::string > *legends=nullptr, const std::vector< std::vector< int >> *highlight_atoms=nullptr, const std::vector< std::vector< int >> *highlight_bonds=nullptr, const std::vector< std::map< int, DrawColour >> *highlight_atom_maps=nullptr, const std::vector< std::map< int, DrawColour >> *highlight_bond_maps=nullptr, const std::vector< std::map< int, double >> *highlight_radii=nullptr, const std::vector< int > *confIds=nullptr)
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:252: warning: argument 'highlight_bond_map' of command @param is not found in the argument list of RDKit::MolDraw2D::drawMolecules(const std::vector< ROMol * > &mols, const std::vector< std::string > *legends=nullptr, const std::vector< std::vector< int >> *highlight_atoms=nullptr, const std::vector< std::vector< int >> *highlight_bonds=nullptr, const std::vector< std::map< int, DrawColour >> *highlight_atom_maps=nullptr, const std::vector< std::map< int, DrawColour >> *highlight_bond_maps=nullptr, const std::vector< std::map< int, double >> *highlight_radii=nullptr, const std::vector< int > *confIds=nullptr)
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:252: warning: argument 'confId' of command @param is not found in the argument list of RDKit::MolDraw2D::drawMolecules(const std::vector< ROMol * > &mols, const std::vector< std::string > *legends=nullptr, const std::vector< std::vector< int >> *highlight_atoms=nullptr, const std::vector< std::vector< int >> *highlight_bonds=nullptr, const std::vector< std::map< int, DrawColour >> *highlight_atom_maps=nullptr, const std::vector< std::map< int, DrawColour >> *highlight_bond_maps=nullptr, const std::vector< std::map< int, double >> *highlight_radii=nullptr, const std::vector< int > *confIds=nullptr)
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:277: warning: argument 'highlight_atoms' from the argument list of RDKit::MolDraw2D::drawMolecules has multiple @param documentation sections
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:277: warning: The following parameters of RDKit::MolDraw2D::drawMolecules(const std::vector< ROMol * > &mols, const std::vector< std::string > *legends=nullptr, const std::vector< std::vector< int >> *highlight_atoms=nullptr, const std::vector< std::vector< int >> *highlight_bonds=nullptr, const std::vector< std::map< int, DrawColour >> *highlight_atom_maps=nullptr, const std::vector< std::map< int, DrawColour >> *highlight_bond_maps=nullptr, const std::vector< std::map< int, double >> *highlight_radii=nullptr, const std::vector< int > *confIds=nullptr) are not documented:
  parameter 'highlight_bonds'
  parameter 'highlight_atom_maps'
  parameter 'highlight_bond_maps'
  parameter 'confIds'
/<<PKGBUILDDIR>>/Code/GraphMol/Resonance.h:55: warning: argument 'numThreads' of command @param is not found in the argument list of RDKit::ResonanceMolSupplier::ResonanceMolSupplier(ROMol &mol, unsigned int flags=0, unsigned int maxStructs=1000)
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h:322: warning: argument 'matches' of command @param is not found in the argument list of RDKit::SmartsMatcher::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const inherited from member getMatches at line 98 in file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h:322: warning: The following parameter of RDKit::SmartsMatcher::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const is not documented:
  parameter 'matchVect'
t::FragCatGenerator...
Generating docs for compound RDKit::FragCatParams...
Generating docs for compound RDKit::FragFPGenerator...
Generating docs for compound RDKit::GasteigerParams...
Generating docs for compound RDKit::HasPropQuery...
Generating docs for compound RDKit::HasPropWithValueQuery...
Generating docs for compound RDKit::HasPropWithValueQuery< TargetPtr, ExplicitBitVect >...
Generating docs for compound RDKit::HasPropWithValueQuery< TargetPtr, std::string >...
Generating docs for compound RDKit::HeteroatomIterator_...
Generating docs for compound RDKit::KekulizeException...
Generating docs for compound RDKit::larger_of...
Generating docs for compound RDKit::ltDouble...
Generating docs for compound RDKit::MatchingAtomIterator_...
Generating docs for compound RDKit::MCSAtomCompareParameters...
Generating docs for compound RDKit::MCSBondCompareParameters...
Generating docs for compound RDKit::MCSParameters...
Generating docs for compound RDKit::MCSProgressData...
Generating docs for compound RDKit::MCSResult...
Generating docs for compound RDKit::MolBundle...
Generating docs for compound RDKit::MolCatalogEntry...
Generating docs for compound RDKit::MolCatalogParams...
Generating docs for compound RDKit::MolChemicalFeature...
Generating docs for compound RDKit::MolChemicalFeatureDef...
Generating docs for compound RDKit::MolChemicalFeatureFactory...
Generating docs for compound RDKit::MolDraw2D...
Generating docs for compound RDKit::MolDraw2DCairo...
Generating docs for compound RDKit::MolDraw2DQt...
Generating docs for compound RDKit::MolDraw2DSVG...
Generating docs for compound RDKit::MolDraw2Dwx...
Generating docs for compound RDKit::MolDrawOptions...
Generating docs for compound RDKit::MolFileUnhandledFeatureException...
Generating docs for compound RDKit::MolHolder...
Generating docs for compound RDKit::MolHolderBase...
Generating docs for compound RDKit::MolPickler...
Generating docs for compound RDKit::MolPicklerException...
Generating docs for compound RDKit::MolSanitizeException...
Generating docs for compound RDKit::MolSupplier...
Generating docs for compound RDKit::MolWriter...
Generating docs for compound RDKit::MultiFPBReader...
Generating docs for compound RDKit::MultiMolDraw2D...
Generating docs for compound RDKit::PatternHolder...
Generating docs for compound RDKit::PDBMolSupplier...
Generating docs for compound RDKit::PDBWriter...
Generating docs for compound RDKit::PeriodicTable...
Generating docs for compound RDKit::QueryAtom...
Generating docs for compound RDKit::QueryAtomIterator_...
Generating docs for compound RDKit::QueryBond...
Generating docs for compound RDKit::RandomSampleAllBBsStrategy...
Generating docs for compound RDKit::RandomSampleStrategy...
Generating docs for compound RDKit::RDAny...
Generating docs for compound RDKit::RDProps...
Generating docs for compound RDKit::RDValue...
Generating docs for compound RDKit::ReactionFingerprintParams...
Generating docs for compound RDKit::ReactionPickler...
Generating docs for compound RDKit::ReactionPicklerException...
Generating docs for compound RDKit::RecursiveStructureQuery...
Generating docs for compound RDKit::ResonanceMolSupplier...
Generating docs for compound RDKit::RGroupDecomposition...
Generating docs for compound RDKit::RGroupDecompositionParameters...
Generating docs for compound RDKit::RingInfo...
Generating docs for compound RDKit::ROMol...
Generating docs for compound RDKit::RWMol...
Generating docs for compound RDKit::RxnSanitizeException...
Generating docs for compound RDKit::SDMolSupplier...
Generating docs for compound RDKit::SDWriter...
Generating docs for compound RDKit::SLNParseException...
Generating docs for compound RDKit::SmartsMatcher...
Generating docs for compound RDKit::SmilesMolSupplier...
Generating docs for compound RDKit::SmilesParseException...
Generating docs for compound RDKit::SmilesParserParams...
Generating docs for compound RDKit::SmilesWriter...
Generating docs for compound RDKit::Snapshot...
Generating docs for compound RDKit::SparseIntVect...
Generating docs for compound RDKit::StereoGroup...
G/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairGenerator.h:103: warning: The following parameter of RDKit::AtomPair::AtomPairAtomEnv::getBitId(FingerprintArguments< OutputType > *arguments, const std::vector< std::uint32_t > *atomInvariants, const std::vector< std::uint32_t > *bondInvariants, const AdditionalOutput *AdditionalOutput, const bool hashResults=false) const is not documented:
  parameter 'AdditionalOutput'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairs.h:121: warning: The following parameter of RDKit::AtomPairs::getHashedAtomPairFingerprint(const ROMol &mol, unsigned int nBits=2048, unsigned int minLength=1, unsigned int maxLength=maxPathLen - 1, const std::vector< std::uint32_t > *fromAtoms=0, const std::vector< std::uint32_t > *ignoreAtoms=0, const std::vector< std::uint32_t > *atomInvariants=0, bool includeChirality=false, bool use2D=true, int confId=-1) is not documented:
  parameter 'confId'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintUtil.h:77: warning: The following parameter of RDKit::AtomPairs::getTopologicalTorsionCode(const std::vector< std::uint32_t > &atomCodes, bool includeChirality=false) is not documented:
  parameter 'includeChirality'
/<<PKGBUILDDIR>>/Code/GraphMol/Canon.h:114: warning: The following parameters of RDKit::Canon::canonicalizeFragment(ROMol &mol, int atomIdx, std::vector< AtomColors > &colors, const std::vector< unsigned int > &ranks, MolStack &molStack, const boost::dynamic_bitset<> *bondsInPlay=0, const std::vector< std::string > *bondSymbols=0, bool doIsomericSmiles=false, bool doRandom=false) are not documented:
  parameter 'bondsInPlay'
  parameter 'bondSymbols'
  parameter 'doIsomericSmiles'
  parameter 'doRandom'
/<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Lipinski.h:44: warning: argument 'strict' of command @param is not found in the argument list of RDKit::Descriptors::calcNumRotatableBonds(const ROMol &mol, NumRotatableBondsOptions useStrictDefinition=Default)
/<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Lipinski.h:52: warning: The following parameter of RDKit::Descriptors::calcNumRotatableBonds(const ROMol &mol, NumRotatableBondsOptions useStrictDefinition=Default) is not documented:
  parameter 'useStrictDefinition'
/<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/USRDescriptor.h:81: warning: The following parameter of RDKit::Descriptors::USRCAT(const ROMol &mol, std::vector< double > &descriptor, std::vector< std::vector< unsigned int >> &atomIds, int confId=-1) is not documented:
  parameter 'atomIds'
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h:86: warning: argument 'matches' of command @param is not found in the argument list of RDKit::FilterMatchOps::And::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const inherited from member getMatches at line 98 in file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h:86: warning: The following parameter of RDKit::FilterMatchOps::And::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const is not documented:
  parameter 'matchVect'
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h:204: warning: argument 'matches' of command @param is not found in the argument list of RDKit::FilterMatchOps::Not::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const inherited from member getMatches at line 98 in file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h:204: warning: The following parameter of RDKit::FilterMatchOps::Not::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const is not documented:
  parameter 'matchVect'
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h:148: warning: argument 'matches' of command @param is not found in the argument list of RDKit::FilterMatchOps::Or::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const inherited from member getMatches at line 98 in file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h:148: warning: The following parameter of RDKit::FilterMatchOps::Or::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const is not documented:
  parameter 'matchVect'
enerating docs for compound RDKit::SubstanceGroup...
Generating docs for nested compound RDKit::SubstanceGroup::AttachPoint...
Generating docs for nested compound RDKit::SubstanceGroup::CState...
Generating docs for compound RDKit::SubstanceGroupException...
Generating docs for compound RDKit::SubstructLibrary...
Generating docs for compound RDKit::SubstructMatchParameters...
Generating docs for compound RDKit::TDTMolSupplier...
Generating docs for compound RDKit::TDTWriter...
Generating docs for compound RDKit::Trajectory...
Generating docs for compound RDKit::UnimplementedFPException...
Generating docs for namespace RDKit::AtomPair
Generating docs for compound RDKit::AtomPair::AtomPairArguments...
Generating docs for compound RDKit::AtomPair::AtomPairAtomEnv...
Generating docs for compound RDKit::AtomPair::AtomPairAtomInvGenerator...
Generating docs for compound RDKit::AtomPair::AtomPairEnvGenerator...
Generating docs for namespace RDKit::AtomPairs
Generating docs for namespace RDKit::Canon
Generating docs for compound RDKit::Canon::AtomCompareFunctor...
Generating docs for compound RDKit::Canon::bondholder...
Generating docs for compound RDKit::Canon::canon_atom...
Generating docs for compound RDKit::Canon::ChiralAtomCompareFunctor...
Generating docs for compound RDKit::Canon::MolStackElem...
Generating docs for compound RDKit::Canon::MolStackUnion...
Generating docs for compound RDKit::Canon::SpecialChiralityAtomCompareFunctor...
Generating docs for compound RDKit::Canon::SpecialSymmetryAtomCompareFunctor...
Generating docs for namespace RDKit::common_properties
Generating docs for namespace RDKit::constants
Generating docs for namespace RDKit::Descriptors
Generating docs for compound RDKit::Descriptors::CrippenParamCollection...
Generating docs for compound RDKit::Descriptors::CrippenParams...
Generating docs for compound RDKit::Descriptors::Properties...
Generating docs for compound RDKit::Descriptors::PropertyFunctor...
Generating docs for namespace RDKit::Descriptors::detail
Generating docs for namespace RDKit::detail
Generating docs for namespace RDKit::DGeomHelpers
Generating docs for compound RDKit::DGeomHelpers::EmbedParameters...
Generating docs for namespace RDKit::DTags
Generating docs for namespace RDKit::EnumerationStrategyPickler
Generating docs for namespace RDKit::EnumerationTypes
Generating docs for namespace RDKit::FileParserUtils
Generating docs for namespace RDKit::FilterMatchOps
Generating docs for compound RDKit::FilterMatchOps::And...
Generating docs for compound RDKit::FilterMatchOps::Not...
Generating docs for compound RDKit::FilterMatchOps::Or...
Generating docs for namespace RDKit::FMCS
Generating docs for compound RDKit::FMCS::Composition2N...
Generating docs for compound RDKit::FMCS::DuplicatedSeedCache...
Generating docs for nested compound RDKit::FMCS::DuplicatedSeedCache::TKey...
Generating docs for compound RDKit::FMCS::ExecStatistics...
Generating docs for compound RDKit::FMCS::Graph...
Generating docs for compound RDKit::FMCS::MaximumCommonSubgraph...
Generating docs for compound RDKit::FMCS::MolFragment...
Generating docs for compound RDKit::FMCS::NewBond...
Generating docs for compound RDKit::FMCS::RingMatchTableSet...
Generating docs for compound RDKit::FMCS::Seed...
Generating docs for compound RDKit::FMCS::SeedSet...
Generating docs for compound RDKit::FMCS::SubstructureCache...
Generating docs for nested compound RDKit::FMCS::SubstructureCache::HashKey...
Generating docs for nested compound RDKit::FMCS::SubstructureCache::KeyNumericMetrics...
Generating docs for compound RDKit::FMCS::Target...
Generating docs for compound RDKit::FMCS::TargetMatch...
Generating docs for compound RDKit::FMCS::TArray2D...
Generating docs for namespace RDKit::ForceFieldsHelper
Generating docs for namespace RDKit::ForceFieldsHelper::detail
Generating docs for namespace RDKit::Local
Generating docs for namespace RDKit::MACCSFingerprints
Generating docs for namespace RDKit::MMFF
Generating docs for compound RDKit::MMFF::MMFFAtomProperties...
Generating docs for compound RDKit::MMFF::MMFFMolProperties/<<PKGBUILDDIR>>/Code/GraphMol/MMPA/MMPA.h:36: warning: The following parameter of RDKit::MMPA::fragmentMol(const ROMol &mol, std::vector< std::pair< ROMOL_SPTR, ROMOL_SPTR >> &result, unsigned int maxCuts=3, unsigned int maxCutBonds=20, const std::string &pattern="[#6+0;!$(*=,#[!#6])]!@!=!#[*]") is not documented:
  parameter 'pattern'
/<<PKGBUILDDIR>>/Code/GraphMol/MMPA/MMPA.h:57: warning: The following parameter of RDKit::MMPA::fragmentMol(const ROMol &mol, std::vector< std::pair< ROMOL_SPTR, ROMOL_SPTR >> &result, unsigned int minCuts, unsigned int maxCuts, unsigned int maxCutBonds, const std::string &pattern="[#6+0;!$(*=,#[!#6])]!@!=!#[*]") is not documented:
  parameter 'pattern'
/<<PKGBUILDDIR>>/Code/GraphMol/MolOps.h:673: warning: The following parameter of RDKit::MolOps::getAdjacencyMatrix(const ROMol &mol, bool useBO=false, int emptyVal=0, bool force=false, const char *propNamePrefix=0, const boost::dynamic_bitset<> *bondsToUse=0) is not documented:
  parameter 'bondsToUse'
/<<PKGBUILDDIR>>/Code/GraphMol/MolOps.h:260: warning: The following parameter of RDKit::MolOps::mergeQueryHs(const ROMol &mol, bool mergeUnmappedOnly=false) is not documented:
  parameter 'mergeUnmappedOnly'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.h:188: warning: argument 'OutputType' of command @param is not found in the argument list of RDKit::MorganFingerprint::getMorganGenerator(const unsigned int radius, const bool countSimulation=false, const bool includeChirality=false, const bool useBondTypes=true, const bool onlyNonzeroInvariants=false, AtomInvariantsGenerator *atomInvariantsGenerator=nullptr, BondInvariantsGenerator *bondInvariantsGenerator=nullptr, const std::uint32_t fpSize=2048, const std::vector< std::uint32_t > countBounds={1, 2, 4, 8}, const bool ownsAtomInvGen=false, const bool ownsBondInvGen=false)
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.h:188: warning: argument 'radiu' of command @param is not found in the argument list of RDKit::MorganFingerprint::getMorganGenerator(const unsigned int radius, const bool countSimulation=false, const bool includeChirality=false, const bool useBondTypes=true, const bool onlyNonzeroInvariants=false, AtomInvariantsGenerator *atomInvariantsGenerator=nullptr, BondInvariantsGenerator *bondInvariantsGenerator=nullptr, const std::uint32_t fpSize=2048, const std::vector< std::uint32_t > countBounds={1, 2, 4, 8}, const bool ownsAtomInvGen=false, const bool ownsBondInvGen=false)
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.h:228: warning: argument 'countSimulation' from the argument list of RDKit::MorganFingerprint::getMorganGenerator has multiple @param documentation sections
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.h:228: warning: argument 'includeChirality' from the argument list of RDKit::MorganFingerprint::getMorganGenerator has multiple @param documentation sections
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.h:228: warning: argument 'onlyNonzeroInvariants' from the argument list of RDKit::MorganFingerprint::getMorganGenerator has multiple @param documentation sections
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.h:228: warning: The following parameter of RDKit::MorganFingerprint::getMorganGenerator(const unsigned int radius, const bool countSimulation=false, const bool includeChirality=false, const bool useBondTypes=true, const bool onlyNonzeroInvariants=false, AtomInvariantsGenerator *atomInvariantsGenerator=nullptr, BondInvariantsGenerator *bondInvariantsGenerator=nullptr, const std::uint32_t fpSize=2048, const std::vector< std::uint32_t > countBounds={1, 2, 4, 8}, const bool ownsAtomInvGen=false, const bool ownsBondInvGen=false) is not documented:
  parameter 'radius'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.h:151: warning: The following parameter of RDKit::MorganFingerprint::MorganAtomEnv::getBitId(FingerprintArguments< OutputType > *arguments, const std::vector< std::uint32_t > *atomInvariants, const std::vector< std::uint32_t > *bondInvariants, const AdditionalOutput *AdditionalOutput, const bool hashResults=false) const is not documented:
  parameter 'AdditionalOutput'
...
Generating docs for namespace RDKit::MMFF::DefaultParameters
Generating docs for namespace RDKit::MMFF::Tools
Generating docs for compound RDKit::MMFF::Tools::DefaultTorsionBondSmarts...
Generating docs for namespace RDKit::MMPA
Generating docs for namespace RDKit::MolAlign
Generating docs for compound RDKit::MolAlign::LAP...
Generating docs for compound RDKit::MolAlign::MolAlignException...
Generating docs for compound RDKit::MolAlign::MolHistogram...
Generating docs for compound RDKit::MolAlign::O3A...
Generating docs for compound RDKit::MolAlign::O3AConstraint...
Generating docs for compound RDKit::MolAlign::O3AConstraintVect...
Generating docs for compound RDKit::MolAlign::O3AFuncData...
Generating docs for compound RDKit::MolAlign::SDM...
Generating docs for namespace RDKit::MolDraw2D_detail
Generating docs for namespace RDKit::MolDraw2DUtils
Generating docs for compound RDKit::MolDraw2DUtils::ContourParams...
Generating docs for namespace RDKit::MolFragmenter
Generating docs for compound RDKit::MolFragmenter::FragmenterBondType...
Generating docs for namespace RDKit::MolHash
Generating docs for compound RDKit::MolHash::HashSet...
Generating docs for namespace RDKit::MolInterchange
Generating docs for compound RDKit::MolInterchange::JSONParseParameters...
Generating docs for namespace RDKit::MolOps
Generating docs for compound RDKit::MolOps::AdjustQueryParameters...
Generating docs for namespace RDKit::MolShapes
Generating docs for namespace RDKit::MolStandardize
Generating docs for compound RDKit::MolStandardize::AcidBaseCatalogEntry...
Generating docs for compound RDKit::MolStandardize::AcidBaseCatalogParams...
Generating docs for compound RDKit::MolStandardize::AllowedAtomsValidation...
Generating docs for compound RDKit::MolStandardize::ChargeCorrection...
Generating docs for compound RDKit::MolStandardize::CleanupParameters...
Generating docs for compound RDKit::MolStandardize::DisallowedAtomsValidation...
Generating docs for compound RDKit::MolStandardize::FragmentCatalogEntry...
Generating docs for compound RDKit::MolStandardize::FragmentCatalogParams...
Generating docs for compound RDKit::MolStandardize::FragmentRemover...
Generating docs for compound RDKit::MolStandardize::FragmentValidation...
Generating docs for compound RDKit::MolStandardize::IsotopeValidation...
Generating docs for compound RDKit::MolStandardize::LargestFragmentChooser...
Generating docs for nested compound RDKit::MolStandardize::LargestFragmentChooser::Largest...
Generating docs for compound RDKit::MolStandardize::MetalDisconnector...
Generating docs for compound RDKit::MolStandardize::MolVSValidation...
Generating docs for compound RDKit::MolStandardize::MolVSValidations...
Generating docs for compound RDKit::MolStandardize::NeutralValidation...
Generating docs for compound RDKit::MolStandardize::NoAtomValidation...
Generating docs for compound RDKit::MolStandardize::Normalizer...
Generating docs for nested compound RDKit::MolStandardize::Normalizer::Product...
Generating docs for compound RDKit::MolStandardize::RDKitValidation...
Generating docs for compound RDKit::MolStandardize::Reionizer...
Generating docs for compound RDKit::MolStandardize::TautomerCanonicalizer...
Generating docs for compound RDKit::MolStandardize::TautomerCatalogEntry...
Generating docs for compound RDKit::MolStandardize::TautomerCatalogParams...
Generating docs for compound RDKit::MolStandardize::TautomerEnumerator...
Generating docs for compound RDKit::MolStandardize::TautomerTransform...
Generating docs for compound RDKit::MolStandardize::TransformCatalogEntry...
Generating docs for compound RDKit::MolStandardize::TransformCatalogParams...
Generating docs for compound RDKit::MolStandardize::Uncharger...
Generating docs for compound RDKit::MolStandardize::ValidationErrorInfo...
Generating docs for compound RDKit::MolStandardize::ValidationMethod...
Generating docs for namespace RDKit::MorganFingerprint
Generating docs for compound RDKit::MorganFingerprint::MorganArguments...
Generating docs for compound RDKit::MorganFingerprint::MorganAtomEnv...
Generatin/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganFingerprints.h:152: warning: The following parameter of RDKit::MorganFingerprints::getHashedFingerprint(const ROMol &mol, unsigned int radius, unsigned int nBits=2048, std::vector< std::uint32_t > *invariants=0, const std::vector< std::uint32_t > *fromAtoms=0, bool useChirality=false, bool useBondTypes=true, bool onlyNonzeroInvariants=false, BitInfoMap *atomsSettingBits=0) is not documented:
  parameter 'nBits'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/RDKitFPGenerator.h:76: warning: The following parameter of RDKit::RDKitFP::RDKitFPAtomEnv::getBitId(FingerprintArguments< OutputType > *arguments, const std::vector< std::uint32_t > *atomInvariants, const std::vector< std::uint32_t > *bondInvariants, const AdditionalOutput *AdditionalOutput, bool hashResults=false) const is not documented:
  parameter 'AdditionalOutput'
/<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs/ReducedGraphs.h:34: warning: The following parameter of RDKit::ReducedGraphs::generateMolExtendedReducedGraph(const ROMol &mol, std::vector< boost::dynamic_bitset<>> *atomTypes=0) is not documented:
  parameter 'atomTypes'
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/SanitizeRxn.h:125: warning: argument 'operationThatFailed' of command @param is not found in the argument list of RDKit::RxnOps::sanitizeRxn(ChemicalReaction &rxn, unsigned int &operationsThatFailed, unsigned int sanitizeOps=SANITIZE_ALL, const MolOps::AdjustQueryParameters &params=DefaultRxnAdjustParams())
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/SanitizeRxn.h:156: warning: The following parameters of RDKit::RxnOps::sanitizeRxn(ChemicalReaction &rxn, unsigned int &operationsThatFailed, unsigned int sanitizeOps=SANITIZE_ALL, const MolOps::AdjustQueryParameters &params=DefaultRxnAdjustParams()) are not documented:
  parameter 'operationsThatFailed'
  parameter 'params'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:86: warning: argument 'useCountSimulation' of command @param is not found in the argument list of RDKit::TopologicalTorsion::getTopologicalTorsionGenerator(const bool includeChirality=false, const uint32_t torsionAtomCount=4, AtomInvariantsGenerator *atomInvariantsGenerator=nullptr, const bool countSimulation=true, const std::vector< std::uint32_t > countBounds={1, 2, 4, 8}, const std::uint32_t fpSize=2048, const bool ownsAtomInvGen=false)
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:109: warning: The following parameter of RDKit::TopologicalTorsion::getTopologicalTorsionGenerator(const bool includeChirality=false, const uint32_t torsionAtomCount=4, AtomInvariantsGenerator *atomInvariantsGenerator=nullptr, const bool countSimulation=true, const std::vector< std::uint32_t > countBounds={1, 2, 4, 8}, const std::uint32_t fpSize=2048, const bool ownsAtomInvGen=false) is not documented:
  parameter 'countSimulation'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:32: warning: argument 'useCountSimulation' of command @param is not found in the argument list of RDKit::TopologicalTorsion::TopologicalTorsionArguments< OutputType >::TopologicalTorsionArguments(const bool includeChirality, const uint32_t torsionAtomCount, const bool countSimulation, const std::vector< std::uint32_t > countBounds, const std::uint32_t fpSize)
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:44: warning: The following parameter of RDKit::TopologicalTorsion::TopologicalTorsionArguments::TopologicalTorsionArguments(const bool includeChirality, const uint32_t torsionAtomCount, const bool countSimulation, const std::vector< std::uint32_t > countBounds, const std::uint32_t fpSize) is not documented:
  parameter 'countSimulation'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:57: warning: The following parameter of RDKit::TopologicalTorsion::TopologicalTorsionAtomEnv::getBitId(FingerprintArguments< OutputType > *arguments, const std::vector< std::uint32_t > *atomInvariants, const std::vector< std::uint32_t > *bondInvariants, const AdditionalOutput *AdditionalOutput, const bool hashResults=false) const is not documented:
  parameter 'AdditionalOutput'
/<<PKGBUILDDIR>>/Code/SimDivPickers/HierarchicalClusterPicker.h:80: warning: The following parameter of RDPickers::HierarchicalClusterPicker::pick(const double *distMat, unsigned int poolSize, unsigned int pickSize) const is not documented:
  parameter 'distMat'
/<<PKGBUILDDIR>>/Code/SimDivPickers/LeaderPicker.h:46: warning: argument 'firstPicks' of command @param is not found in the argument list of RDPickers::LeaderPicker::lazyPick(T &func, unsigned int poolSize, unsigned int pickSize) const
/<<PKGBUILDDIR>>/Code/SimDivPickers/LeaderPicker.h:46: warning: argument 'seed' of command @param is not found in the argument list of RDPickers::LeaderPicker::lazyPick(T &func, unsigned int poolSize, unsigned int pickSize) const
/<<PKGBUILDDIR>>/Code/SimDivPickers/LeaderPicker.h:98: warning: The following parameters of RDPickers::LeaderPicker::pick(const double *distMat, unsigned int poolSize, unsigned int pickSize, const RDKit::INT_VECT &firstPicks, double threshold, int nthreads) const are not documented:
  parameter 'threshold'
  parameter 'nthreads'
/<<PKGBUILDDIR>>/Code/SimDivPickers/MaxMinPicker.h:42: warning: argument 'firstPicks' of command @param is not found in the argument list of RDPickers::MaxMinPicker::lazyPick(T &func, unsigned int poolSize, unsigned int pickSize) const
/<<PKGBUILDDIR>>/Code/SimDivPickers/MaxMinPicker.h:42: warning: argument 'seed' of command @param is not found in the argument list of RDPickers::MaxMinPicker::lazyPick(T &func, unsigned int poolSize, unsigned int pickSize) const
g docs for compound RDKit::MorganFingerprint::MorganAtomInvGenerator...
Generating docs for compound RDKit::MorganFingerprint::MorganBondInvGenerator...
Generating docs for compound RDKit::MorganFingerprint::MorganEnvGenerator...
Generating docs for compound RDKit::MorganFingerprint::MorganFeatureAtomInvGenerator...
Generating docs for namespace RDKit::MorganFingerprints
Generating docs for compound RDKit::MorganFingerprints::ss_matcher...
Generating docs for namespace RDKit::PicklerOps
Generating docs for namespace RDKit::RDKitFP
Generating docs for compound RDKit::RDKitFP::RDKitFPArguments...
Generating docs for compound RDKit::RDKitFP::RDKitFPAtomEnv...
Generating docs for compound RDKit::RDKitFP::RDKitFPAtomInvGenerator...
Generating docs for compound RDKit::RDKitFP::RDKitFPEnvGenerator...
Generating docs for namespace RDKit::RDKitFPUtils
Generating docs for namespace RDKit::RDTypeTag
Generating docs for namespace RDKit::RDTypeTag::detail
Generating docs for compound RDKit::RDTypeTag::detail::Value...
Generating docs for namespace RDKit::ReactionRunnerUtils
Generating docs for namespace RDKit::ReducedGraphs
Generating docs for namespace RDKit::RxnOps
Generating docs for namespace RDKit::SGroupParsing
Generating docs for namespace RDKit::SGroupWriting
Generating docs for namespace RDKit::SLNParse
Generating docs for compound RDKit::SLNParse::AttribType...
Generating docs for namespace RDKit::SmartsWrite
Generating docs for namespace RDKit::SmilesWrite
Generating docs for namespace RDKit::StructureCheck
Generating docs for compound RDKit::StructureCheck::AugmentedAtom...
Generating docs for compound RDKit::StructureCheck::ChargeFix...
Generating docs for compound RDKit::StructureCheck::IncEntry...
Generating docs for compound RDKit::StructureCheck::Ligand...
Generating docs for compound RDKit::StructureCheck::Neighbourhood...
Generating docs for compound RDKit::StructureCheck::PathEntry...
Generating docs for compound RDKit::StructureCheck::StructChecker...
Generating docs for compound RDKit::StructureCheck::StructCheckerOptions...
Generating docs for compound RDKit::StructureCheck::StructCheckTautomer...
Generating docs for namespace RDKit::Subgraphs
Generating docs for namespace RDKit::SubstanceGroupChecks
Generating docs for namespace RDKit::TopologicalTorsion
Generating docs for compound RDKit::TopologicalTorsion::TopologicalTorsionArguments...
Generating docs for compound RDKit::TopologicalTorsion::TopologicalTorsionAtomEnv...
Generating docs for compound RDKit::TopologicalTorsion::TopologicalTorsionEnvGenerator...
Generating docs for namespace RDKit::UFF
Generating docs for namespace RDKit::UFF::Tools
Generating docs for compound RDKit::UFF::Tools::DefaultTorsionBondSmarts...
Generating docs for namespace RDKit::Utils
Generating docs for compound RDKit::Utils::LocaleSwitcher...
Generating docs for namespace RDKit::Utils::detail
Generating docs for namespace RDLog
Generating docs for namespace RDNumeric
Generating docs for compound RDNumeric::Matrix...
Generating docs for compound RDNumeric::SquareMatrix...
Generating docs for compound RDNumeric::SymmMatrix...
Generating docs for compound RDNumeric::Vector...
Generating docs for namespace RDNumeric::Alignments
Generating docs for namespace RDNumeric::EigenSolvers
Generating docs for namespace RDPickers
Generating docs for compound RDPickers::DistPicker...
Generating docs for compound RDPickers::HierarchicalClusterPicker...
Generating docs for compound RDPickers::LeaderPicker...
Generating docs for compound RDPickers::LeaderPickerState...
Generating docs for compound RDPickers::MaxMinPicker...
Generating docs for compound RDPickers::MaxMinPickInfo...
Generating docs for namespace RingUtils
Generating docs for namespace SmilesParseOps
Generating graph info page...
Generating directory documentation...
Generating index page...
Generating page index...
Generating module index...
Generating namespace index...
Generating namespace member index...
Generating annotated compound index...
Generating alphabetical compound index...
Generating hierarchical class index...
Generating member index...
Generating file index...
Generating file member index...
Generating example index...
finalizing index lists...
writing tag file...
Running plantuml with JAVA...
lookup cache used 16850/65536 hits=136714 misses=18293
finished...
(cd /<<PKGBUILDDIR>>/Docs/Book; RDBASE=/<<PKGBUILDDIR>> /usr/bin/make html)
make[2]: Entering directory '/<<PKGBUILDDIR>>/Docs/Book'
mkdir -p _build/html/cppapi
cp -r /<<PKGBUILDDIR>>/Code/docs/*  _build/html/cppapi
sphinx-build -b html -d _build/doctrees   . _build/html
Running Sphinx v2.4.3
WARNING: html_static_path entry '_static' does not exist
building [mo]: targets for 0 po files that are out of date
building [html]: targets for 305 source files that are out of date
updating environment: [new config] 305 added, 0 changed, 0 removed
reading sources... [  0%] BackwardsIncompatibleChanges
reading sources... [  0%] Cartridge
reading sources... [  0%] Cookbook
reading sources... [  1%] GettingStartedInPython
reading sources... [  1%] Install
reading sources... [  1%] Overview
reading sources... [  2%] RDKit_Book
reading sources... [  2%] api-docs
reading sources... [  2%] index
reading sources... [  3%] source/modules
reading sources... [  3%] source/rdkit
reading sources... [  3%] source/rdkit.Avalon
reading sources... [  4%] source/rdkit.Avalon.pyAvalonTools
reading sources... [  4%] source/rdkit.Chem
reading sources... [  4%] source/rdkit.Chem.AllChem
reading sources... [  5%] source/rdkit.Chem.AtomPairs
reading sources... [  5%] source/rdkit.Chem.AtomPairs.Pairs
reading sources... [  5%] source/rdkit.Chem.AtomPairs.Sheridan
reading sources... [  6%] source/rdkit.Chem.AtomPairs.Torsions
reading sources... [  6%] source/rdkit.Chem.AtomPairs.Utils
reading sources... [  6%] source/rdkit.Chem.BRICS
reading sources... [  7%] source/rdkit.Chem.BuildFragmentCatalog
reading sources... [  7%] source/rdkit.Chem.ChemUtils
reading sources... [  7%] source/rdkit.Chem.ChemUtils.AlignDepict
reading sources... [  8%] source/rdkit.Chem.ChemUtils.BulkTester
reading sources... [  8%] source/rdkit.Chem.ChemUtils.DescriptorUtilities
reading sources... [  8%] source/rdkit.Chem.ChemUtils.SDFToCSV
reading sources... [  9%] source/rdkit.Chem.ChemUtils.TemplateExpand
reading sources... [  9%] source/rdkit.Chem.ChemicalFeatures
reading sources... [  9%] source/rdkit.Chem.ChemicalForceFields
reading sources... [ 10%] source/rdkit.Chem.Crippen
reading sources... [ 10%] source/rdkit.Chem.DSViewer
reading sources... [ 10%] source/rdkit.Chem.Descriptors
reading sources... [ 11%] source/rdkit.Chem.Descriptors3D
reading sources... [ 11%] source/rdkit.Chem.Draw
reading sources... [ 11%] source/rdkit.Chem.Draw.IPythonConsole
reading sources... [ 12%] source/rdkit.Chem.Draw.MolDrawing
reading sources... [ 12%] source/rdkit.Chem.Draw.SimilarityMaps
reading sources... [ 12%] source/rdkit.Chem.Draw.aggCanvas
reading sources... [ 13%] source/rdkit.Chem.Draw.cairoCanvas
reading sources... [ 13%] source/rdkit.Chem.Draw.canvasbase
reading sources... [ 13%] source/rdkit.Chem.Draw.mplCanvas
reading sources... [ 14%] source/rdkit.Chem.Draw.qtCanvas
reading sources... [ 14%] source/rdkit.Chem.Draw.rdMolDraw2D
reading sources... [ 14%] source/rdkit.Chem.EState
reading sources... [ 15%] source/rdkit.Chem.EState.AtomTypes
reading sources... [ 15%] source/rdkit.Chem.EState.EState
reading sources... [ 15%] source/rdkit.Chem.EState.EState_VSA
reading sources... [ 16%] source/rdkit.Chem.EState.Fingerprinter
reading sources... [ 16%] source/rdkit.Chem.EnumerateHeterocycles
reading sources... [ 16%] source/rdkit.Chem.EnumerateStereoisomers
reading sources... [ 17%] source/rdkit.Chem.FastSDMolSupplier
reading sources... [ 17%] source/rdkit.Chem.FeatFinderCLI
reading sources... [ 17%] source/rdkit.Chem.FeatMaps
reading sources... [ 18%] source/rdkit.Chem.FeatMaps.FeatMapParser
reading sources... [ 18%] source/rdkit.Chem.FeatMaps.FeatMapPoint
reading sources... [ 18%] source/rdkit.Chem.FeatMaps.FeatMapUtils
reading sources... [ 19%] source/rdkit.Chem.FeatMaps.FeatMaps
reading sources... [ 19%] source/rdkit.Chem.Features
reading sources... [ 19%] source/rdkit.Chem.Features.FeatDirUtilsRD
reading sources... [ 20%] source/rdkit.Chem.Features.ShowFeats
reading sources... [ 20%] source/rdkit.Chem.FilterCatalog
reading sources... [ 20%] source/rdkit.Chem.Fingerprints
reading sources... [ 20%] source/rdkit.Chem.Fingerprints.ClusterMols
reading sources... [ 21%] source/rdkit.Chem.Fingerprints.DbFpSupplier
reading sources... [ 21%] source/rdkit.Chem.Fingerprints.FingerprintMols
reading sources... [ 21%] source/rdkit.Chem.Fingerprints.MolSimilarity
reading sources... [ 22%] source/rdkit.Chem.Fingerprints.SimilarityScreener
reading sources... [ 22%] source/rdkit.Chem.Fraggle
reading sources... [ 22%] source/rdkit.Chem.Fraggle.FraggleSim
reading sources... [ 23%] source/rdkit.Chem.FragmentCatalog
reading sources... [ 23%] source/rdkit.Chem.FragmentMatcher
reading sources... [ 23%] source/rdkit.Chem.Fragments
reading sources... [ 24%] source/rdkit.Chem.FunctionalGroups
reading sources... [ 24%] source/rdkit.Chem.GraphDescriptors
reading sources... [ 24%] source/rdkit.Chem.Graphs
reading sources... [ 25%] source/rdkit.Chem.Lipinski
reading sources... [ 25%] source/rdkit.Chem.MACCSkeys
reading sources... [ 25%] source/rdkit.Chem.MCS
reading sources... [ 26%] source/rdkit.Chem.MolCatalog
reading sources... [ 26%] source/rdkit.Chem.MolDb
reading sources... [ 26%] source/rdkit.Chem.MolDb.FingerprintUtils
reading sources... [ 27%] source/rdkit.Chem.MolDb.Loader
reading sources... [ 27%] source/rdkit.Chem.MolDb.Loader_orig
reading sources... [ 27%] source/rdkit.Chem.MolDb.Loader_sa
reading sources... [ 28%] source/rdkit.Chem.MolKey
reading sources... [ 28%] source/rdkit.Chem.MolKey.InchiInfo
reading sources... [ 28%] source/rdkit.Chem.MolKey.MolKey
reading sources... [ 29%] source/rdkit.Chem.MolStandardize
reading sources... [ 29%] source/rdkit.Chem.MolStandardize.rdMolStandardize
reading sources... [ 29%] source/rdkit.Chem.MolSurf
reading sources... [ 30%] source/rdkit.Chem.PandasTools
reading sources... [ 30%] source/rdkit.Chem.PeriodicTable
reading sources... [ 30%] source/rdkit.Chem.Pharm2D
reading sources... [ 31%] source/rdkit.Chem.Pharm2D.Generate
reading sources... [ 31%] source/rdkit.Chem.Pharm2D.Gobbi_Pharm2D
reading sources... [ 31%] source/rdkit.Chem.Pharm2D.LazyGenerator
reading sources... [ 32%] source/rdkit.Chem.Pharm2D.Matcher
reading sources... [ 32%] source/rdkit.Chem.Pharm2D.SigFactory
reading sources... [ 32%] source/rdkit.Chem.Pharm2D.Utils
reading sources... [ 33%] source/rdkit.Chem.Pharm3D
reading sources... [ 33%] source/rdkit.Chem.Pharm3D.EmbedLib
reading sources... [ 33%] source/rdkit.Chem.Pharm3D.ExcludedVolume
reading sources... [ 34%] source/rdkit.Chem.Pharm3D.Pharmacophore
reading sources... [ 34%] source/rdkit.Chem.PropertyMol
reading sources... [ 34%] source/rdkit.Chem.PyMol
reading sources... [ 35%] source/rdkit.Chem.QED
reading sources... [ 35%] source/rdkit.Chem.Randomize
reading sources... [ 35%] source/rdkit.Chem.Recap
reading sources... [ 36%] source/rdkit.Chem.ReducedGraphs
reading sources... [ 36%] source/rdkit.Chem.SATIS
reading sources... [ 36%] source/rdkit.Chem.SaltRemover
reading sources... [ 37%] source/rdkit.Chem.Scaffolds
reading sources... [ 37%] source/rdkit.Chem.Scaffolds.MurckoScaffold
reading sources... [ 37%] source/rdkit.Chem.Scaffolds.ScaffoldTree
reading sources... [ 38%] source/rdkit.Chem.ShowMols
reading sources... [ 38%] source/rdkit.Chem.SimpleEnum
reading sources... [ 38%] source/rdkit.Chem.SimpleEnum.Enumerator
reading sources... [ 39%] source/rdkit.Chem.Subshape
reading sources... [ 39%] source/rdkit.Chem.Subshape.BuilderUtils
reading sources... [ 39%] source/rdkit.Chem.Subshape.SubshapeAligner
reading sources... [ 40%] source/rdkit.Chem.Subshape.SubshapeBuilder
reading sources... [ 40%] source/rdkit.Chem.Subshape.SubshapeObjects
reading sources... [ 40%] source/rdkit.Chem.Subshape.testCombined
reading sources... [ 40%] source/rdkit.Chem.Suppliers
reading sources... [ 41%] source/rdkit.Chem.Suppliers.DbMolSupplier
reading sources... [ 41%] source/rdkit.Chem.Suppliers.MolSupplier
reading sources... [ 41%] source/rdkit.Chem.TemplateAlign
reading sources... [ 42%] source/rdkit.Chem.TorsionFingerprints
reading sources... [ 42%] source/rdkit.Chem.fmcs
reading sources... [ 42%] source/rdkit.Chem.fmcs.fmcs
reading sources... [ 43%] source/rdkit.Chem.inchi
reading sources... [ 43%] source/rdkit.Chem.rdChemReactions
reading sources... [ 43%] source/rdkit.Chem.rdChemicalFeatures
reading sources... [ 44%] source/rdkit.Chem.rdCoordGen
reading sources... [ 44%] source/rdkit.Chem.rdDepictor
reading sources... [ 44%] source/rdkit.Chem.rdDistGeom
reading sources... [ 45%] source/rdkit.Chem.rdFMCS
reading sources... [ 45%] source/rdkit.Chem.rdFingerprintGenerator
reading sources... [ 45%] source/rdkit.Chem.rdForceFieldHelpers
reading sources... [ 46%] source/rdkit.Chem.rdFreeSASA
reading sources... [ 46%] source/rdkit.Chem.rdMMPA
reading sources... [ 46%] source/rdkit.Chem.rdMolAlign
reading sources... [ 47%] source/rdkit.Chem.rdMolCatalog
reading sources... [ 47%] source/rdkit.Chem.rdMolChemicalFeatures
reading sources... [ 47%] source/rdkit.Chem.rdMolDescriptors
reading sources... [ 48%] source/rdkit.Chem.rdMolHash
reading sources... [ 48%] source/rdkit.Chem.rdMolInterchange
reading sources... [ 48%] source/rdkit.Chem.rdMolTransforms
reading sources... [ 49%] source/rdkit.Chem.rdPartialCharges
reading sources... [ 49%] source/rdkit.Chem.rdRGroupDecomposition
reading sources... [ 49%] source/rdkit.Chem.rdReducedGraphs
reading sources... [ 50%] source/rdkit.Chem.rdSLNParse
reading sources... [ 50%] source/rdkit.Chem.rdShapeHelpers
reading sources... [ 50%] source/rdkit.Chem.rdStructChecker
reading sources... [ 51%] source/rdkit.Chem.rdSubstructLibrary
reading sources... [ 51%] source/rdkit.Chem.rdchem
reading sources... [ 51%] source/rdkit.Chem.rdfiltercatalog
reading sources... [ 52%] source/rdkit.Chem.rdfragcatalog
reading sources... [ 52%] source/rdkit.Chem.rdinchi
reading sources... [ 52%] source/rdkit.Chem.rdmolfiles
reading sources... [ 53%] source/rdkit.Chem.rdmolops
reading sources... [ 53%] source/rdkit.Chem.rdqueries
reading sources... [ 53%] source/rdkit.Chem.rdtrajectory
reading sources... [ 54%] source/rdkit.DataManip
reading sources... [ 54%] source/rdkit.DataManip.Metric
reading sources... [ 54%] source/rdkit.DataManip.Metric.rdMetricMatrixCalc
reading sources... [ 55%] source/rdkit.DataStructs
reading sources... [ 55%] source/rdkit.DataStructs.BitEnsemble
reading sources... [ 55%] source/rdkit.DataStructs.BitEnsembleDb
reading sources... [ 56%] source/rdkit.DataStructs.BitUtils
reading sources... [ 56%] source/rdkit.DataStructs.HierarchyVis
reading sources... [ 56%] source/rdkit.DataStructs.LazySignature
reading sources... [ 57%] source/rdkit.DataStructs.TopNContainer
reading sources... [ 57%] source/rdkit.DataStructs.VectCollection
reading sources... [ 57%] source/rdkit.DataStructs.cDataStructs
reading sources... [ 58%] source/rdkit.Dbase
reading sources... [ 58%] source/rdkit.Dbase.DbConnection
reading sources... [ 58%] source/rdkit.Dbase.DbInfo
reading sources... [ 59%] source/rdkit.Dbase.DbModule
reading sources... [ 59%] source/rdkit.Dbase.DbReport
reading sources... [ 59%] source/rdkit.Dbase.DbResultSet
reading sources... [ 60%] source/rdkit.Dbase.DbUtils
reading sources... [ 60%] source/rdkit.Dbase.StorageUtils
reading sources... [ 60%] source/rdkit.DistanceGeometry
reading sources... [ 60%] source/rdkit.DistanceGeometry.DistGeom
reading sources... [ 61%] source/rdkit.ForceField
reading sources... [ 61%] source/rdkit.ForceField.rdForceField
reading sources... [ 61%] source/rdkit.Geometry
reading sources... [ 62%] source/rdkit.Geometry.rdGeometry
reading sources... [ 62%] source/rdkit.ML
reading sources... [ 62%] source/rdkit.ML.AnalyzeComposite
reading sources... [ 63%] source/rdkit.ML.BuildComposite
reading sources... [ 63%] source/rdkit.ML.Cluster
reading sources... [ 63%] source/rdkit.ML.Cluster.Butina
reading sources... [ 64%] source/rdkit.ML.Cluster.ClusterUtils
reading sources... [ 64%] source/rdkit.ML.Cluster.ClusterVis
reading sources... [ 64%] source/rdkit.ML.Cluster.Clustering
reading sources... [ 65%] source/rdkit.ML.Cluster.Clusters
reading sources... [ 65%] source/rdkit.ML.Cluster.Murtagh
reading sources... [ 65%] source/rdkit.ML.Cluster.Resemblance
reading sources... [ 66%] source/rdkit.ML.Cluster.Standardize
reading sources... [ 66%] source/rdkit.ML.Composite
reading sources... [ 66%] source/rdkit.ML.Composite.AdjustComposite
reading sources... [ 67%] source/rdkit.ML.Composite.BayesComposite
reading sources... [ 67%] source/rdkit.ML.Composite.Composite
reading sources... [ 67%] source/rdkit.ML.CompositeRun
reading sources... [ 68%] source/rdkit.ML.Data
reading sources... [ 68%] source/rdkit.ML.Data.DataUtils
reading sources... [ 68%] source/rdkit.ML.Data.FindQuantBounds
reading sources... [ 69%] source/rdkit.ML.Data.MLData
reading sources... [ 69%] source/rdkit.ML.Data.Quantize
reading sources... [ 69%] source/rdkit.ML.Data.SplitData
reading sources... [ 70%] source/rdkit.ML.Data.Stats
reading sources... [ 70%] source/rdkit.ML.Data.Transforms
reading sources... [ 70%] source/rdkit.ML.DecTree
reading sources... [ 71%] source/rdkit.ML.DecTree.BuildQuantTree
reading sources... [ 71%] source/rdkit.ML.DecTree.BuildSigTree
reading sources... [ 71%] source/rdkit.ML.DecTree.CrossValidate
reading sources... [ 72%] source/rdkit.ML.DecTree.DecTree
reading sources... [ 72%] source/rdkit.ML.DecTree.Forest
reading sources... [ 72%] source/rdkit.ML.DecTree.ID3
reading sources... [ 73%] source/rdkit.ML.DecTree.PruneTree
reading sources... [ 73%] source/rdkit.ML.DecTree.QuantTree
reading sources... [ 73%] source/rdkit.ML.DecTree.SigTree
reading sources... [ 74%] source/rdkit.ML.DecTree.Tree
reading sources... [ 74%] source/rdkit.ML.DecTree.TreeUtils
reading sources... [ 74%] source/rdkit.ML.DecTree.TreeVis
reading sources... [ 75%] source/rdkit.ML.DecTree.randomtest
reading sources... [ 75%] source/rdkit.ML.Descriptors
reading sources... [ 75%] source/rdkit.ML.Descriptors.CompoundDescriptors
reading sources... [ 76%] source/rdkit.ML.Descriptors.Descriptors
reading sources... [ 76%] source/rdkit.ML.Descriptors.MoleculeDescriptors
reading sources... [ 76%] source/rdkit.ML.Descriptors.Parser
reading sources... [ 77%] source/rdkit.ML.EnrichPlot
reading sources... [ 77%] source/rdkit.ML.GrowComposite
reading sources... [ 77%] source/rdkit.ML.InfoTheory
reading sources... [ 78%] source/rdkit.ML.InfoTheory.BitClusterer
reading sources... [ 78%] source/rdkit.ML.InfoTheory.BitRank
reading sources... [ 78%] source/rdkit.ML.InfoTheory.entropy
reading sources... [ 79%] source/rdkit.ML.InfoTheory.rdInfoTheory
reading sources... [ 79%] source/rdkit.ML.KNN
reading sources... [ 79%] source/rdkit.ML.KNN.CrossValidate
reading sources... [ 80%] source/rdkit.ML.KNN.DistFunctions
reading sources... [ 80%] source/rdkit.ML.KNN.KNNClassificationModel
reading sources... [ 80%] source/rdkit.ML.KNN.KNNModel
reading sources... [ 80%] source/rdkit.ML.KNN.KNNRegressionModel
reading sources... [ 81%] source/rdkit.ML.MLUtils
reading sources... [ 81%] source/rdkit.ML.MLUtils.VoteImg
reading sources... [ 81%] source/rdkit.ML.MatOps
reading sources... [ 82%] source/rdkit.ML.ModelPackage
reading sources... [ 82%] source/rdkit.ML.ModelPackage.PackageUtils
reading sources... [ 82%] source/rdkit.ML.ModelPackage.Packager
reading sources... [ 83%] source/rdkit.ML.NaiveBayes
reading sources... [ 83%] source/rdkit.ML.NaiveBayes.ClassificationModel
reading sources... [ 83%] source/rdkit.ML.NaiveBayes.CrossValidate
reading sources... [ 84%] source/rdkit.ML.Neural
reading sources... [ 84%] source/rdkit.ML.Neural.ActFuncs
reading sources... [ 84%] source/rdkit.ML.Neural.CrossValidate
reading sources... [ 85%] source/rdkit.ML.Neural.NetNode
reading sources... [ 85%] source/rdkit.ML.Neural.Network
reading sources... [ 85%] source/rdkit.ML.Neural.Trainers
reading sources... [ 86%] source/rdkit.ML.SLT
reading sources... [ 86%] source/rdkit.ML.SLT.Risk
reading sources... [ 86%] source/rdkit.ML.Scoring
reading sources... [ 87%] source/rdkit.ML.Scoring.Scoring
reading sources... [ 87%] source/rdkit.ML.ScreenComposite
reading sources... [ 87%] source/rdkit.ML.files
reading sources... [ 88%] source/rdkit.Numerics
reading sources... [ 88%] source/rdkit.Numerics.rdAlignment
reading sources... [ 88%] source/rdkit.RDConfig
reading sources... [ 89%] source/rdkit.RDLogger
reading sources... [ 89%] source/rdkit.RDPaths
reading sources... [ 89%] source/rdkit.RDRandom
reading sources... [ 90%] source/rdkit.SimDivFilters
reading sources... [ 90%] source/rdkit.SimDivFilters.SimilarityPickers
reading sources... [ 90%] source/rdkit.SimDivFilters.rdSimDivPickers
reading sources... [ 91%] source/rdkit.TestRunner
reading sources... [ 91%] source/rdkit.VLib
reading sources... [ 91%] source/rdkit.VLib.Filter
reading sources... [ 92%] source/rdkit.VLib.Node
reading sources... [ 92%] source/rdkit.VLib.NodeLib
reading sources... [ 92%] source/rdkit.VLib.NodeLib.DbMolSupply
reading sources... [ 93%] source/rdkit.VLib.NodeLib.DbPickleSupplier
reading sources... [ 93%] source/rdkit.VLib.NodeLib.SDSupply
reading sources... [ 93%] source/rdkit.VLib.NodeLib.SmartsMolFilter
reading sources... [ 94%] source/rdkit.VLib.NodeLib.SmartsRemover
reading sources... [ 94%] source/rdkit.VLib.NodeLib.SmilesDupeFilter
reading sources... [ 94%] source/rdkit.VLib.NodeLib.SmilesOutput
reading sources... [ 95%] source/rdkit.VLib.NodeLib.SmilesSupply
reading sources... [ 95%] source/rdkit.VLib.NodeLib.demo
reading sources... [ 95%] source/rdkit.VLib.Output
reading sources... [ 96%] source/rdkit.VLib.Supply
reading sources... [ 96%] source/rdkit.VLib.Transform
reading sources... [ 96%] source/rdkit.rdBase
reading sources... [ 97%] source/rdkit.six
reading sources... [ 97%] source/rdkit.utils
reading sources... [ 97%] source/rdkit.utils.cactvs
reading sources... [ 98%] source/rdkit.utils.chemdraw
reading sources... [ 98%] source/rdkit.utils.chemdraw_qax
reading sources... [ 98%] source/rdkit.utils.chemutils
reading sources... [ 99%] source/rdkit.utils.comhack
reading sources... [ 99%] source/rdkit.utils.fileutils
reading sources... [ 99%] source/rdkit.utils.listutils
reading sources... [100%] source/rdkit.utils.spiral

/usr/lib/python3/dist-packages/sphinx/util/compat.py:30: RemovedInSphinx30Warning: The config variable "source_parsers" is deprecated. Please update your extension for the parser and remove the setting.
  warnings.warn('The config variable "source_parsers" is deprecated. '
/usr/lib/python3/dist-packages/sphinx/util/compat.py:36: RemovedInSphinx30Warning: app.add_source_parser() does not support suffix argument. Use app.add_source_suffix() instead.
  app.add_source_parser(suffix, parser)
/usr/lib/python3/dist-packages/recommonmark/parser.py:280: UserWarning: Unsupported inline type Hardbreak
  warn("Unsupported inline type " + inline.t)
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInPython.rst:2817: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/RDKit_Book.rst:208: WARNING: Title underline too short.

Ring closures
------------
/<<PKGBUILDDIR>>/Docs/Book/RDKit_Book.rst:208: WARNING: Title underline too short.

Ring closures
------------
WARNING: autodoc: failed to import module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Avalon' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Avalon.pyAvalonTools' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AllChem' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs.Pairs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs.Sheridan' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs.Torsions' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs.Utils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.BRICS' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.BuildFragmentCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils.AlignDepict' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils.BulkTester' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils.DescriptorUtilities' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils.SDFToCSV' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils.TemplateExpand' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemicalFeatures' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemicalForceFields' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Crippen' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.DSViewer' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Descriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Descriptors3D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.IPythonConsole' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.MolDrawing' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.SimilarityMaps' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.aggCanvas' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.cairoCanvas' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.canvasbase' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.mplCanvas' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.qtCanvas' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.rdMolDraw2D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState.AtomTypes' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState.EState' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState.EState_VSA' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState.Fingerprinter' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EnumerateHeterocycles' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EnumerateStereoisomers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FastSDMolSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatFinderCLI' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps.FeatMapParser' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps.FeatMapPoint' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps.FeatMapUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps.FeatMaps' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Features' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Features.FeatDirUtilsRD' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Features.ShowFeats' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FilterCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.ClusterMols' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.DbFpSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.FingerprintMols' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.MolSimilarity' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.SimilarityScreener' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fraggle' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fraggle.FraggleSim' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FragmentCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FragmentMatcher' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fragments' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FunctionalGroups' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.GraphDescriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Graphs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Lipinski' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MACCSkeys' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MCS' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb.FingerprintUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb.Loader' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb.Loader_orig' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb.Loader_sa' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolKey' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolKey.InchiInfo' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolKey.MolKey' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolStandardize.rdMolStandardize' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolSurf' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.PandasTools' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.PeriodicTable' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.Generate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.Gobbi_Pharm2D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.LazyGenerator' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.Matcher' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.SigFactory' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.Utils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm3D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm3D.EmbedLib' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm3D.ExcludedVolume' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm3D.Pharmacophore' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.PropertyMol' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.PyMol' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.QED' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Randomize' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Recap' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ReducedGraphs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.SATIS' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.SaltRemover' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Scaffolds' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Scaffolds.MurckoScaffold' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Scaffolds.ScaffoldTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ShowMols' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.SimpleEnum' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.SimpleEnum.Enumerator' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape.BuilderUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape.SubshapeAligner' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape.SubshapeBuilder' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape.SubshapeObjects' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape.testCombined' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Suppliers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Suppliers.DbMolSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Suppliers.MolSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.TemplateAlign' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.TorsionFingerprints' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.fmcs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.fmcs.fmcs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.inchi' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdChemReactions' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdChemicalFeatures.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdChemicalFeatures module
=================================
WARNING: autodoc: failed to import module 'Chem.rdChemicalFeatures' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdCoordGen' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdDepictor' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdDistGeom' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdFMCS' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdFingerprintGenerator' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdForceFieldHelpers.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdForceFieldHelpers module
=================================
WARNING: autodoc: failed to import module 'Chem.rdForceFieldHelpers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdFreeSASA' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMMPA' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMolAlign' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMolCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdMolChemicalFeatures.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdMolChemicalFeatures module
=================================
WARNING: autodoc: failed to import module 'Chem.rdMolChemicalFeatures' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdMolDescriptors.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdMolDescriptors module
=================================
WARNING: autodoc: failed to import module 'Chem.rdMolDescriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMolHash' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdMolInterchange.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdMolInterchange module
=================================
WARNING: autodoc: failed to import module 'Chem.rdMolInterchange' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMolTransforms' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdPartialCharges.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdPartialCharges module
=================================
WARNING: autodoc: failed to import module 'Chem.rdPartialCharges' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdRGroupDecomposition.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdRGroupDecomposition module
=================================
WARNING: autodoc: failed to import module 'Chem.rdRGroupDecomposition' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdReducedGraphs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdSLNParse' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdShapeHelpers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdStructChecker' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdSubstructLibrary.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdSubstructLibrary module
=================================
WARNING: autodoc: failed to import module 'Chem.rdSubstructLibrary' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdchem' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdfiltercatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdfragcatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdinchi' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdmolfiles' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdmolops' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdqueries' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdtrajectory' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataManip' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataManip.Metric' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataManip.Metric.rdMetricMatrixCalc' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.BitEnsemble' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.BitEnsembleDb' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.BitUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.HierarchyVis' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.LazySignature' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.TopNContainer' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.VectCollection' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.cDataStructs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbConnection' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbInfo' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbModule' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbReport' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbResultSet' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.StorageUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DistanceGeometry' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DistanceGeometry.DistGeom' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ForceField.rst:5: WARNING: Block quote ends without a blank line; unexpected unindent.
WARNING: autodoc: failed to import module 'ForceField' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ForceField.rdForceField' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Geometry' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Geometry.rdGeometry' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.AnalyzeComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.BuildComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Butina' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.ClusterUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.ClusterVis' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Clustering' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Clusters' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Murtagh' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Resemblance' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Standardize' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Composite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Composite.AdjustComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Composite.BayesComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Composite.Composite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.CompositeRun' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.DataUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.FindQuantBounds' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.MLData' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.Quantize' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.SplitData' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.Stats' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.Transforms' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.BuildQuantTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.BuildSigTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.CrossValidate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.DecTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.Forest' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.ID3' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.PruneTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.QuantTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.SigTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.Tree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.TreeUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.TreeVis' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.randomtest' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors.CompoundDescriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors.Descriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors.MoleculeDescriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors.Parser' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.EnrichPlot' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.GrowComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.InfoTheory' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.InfoTheory.BitClusterer' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.InfoTheory.BitRank' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.InfoTheory.entropy' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.InfoTheory.rdInfoTheory.rst:2: WARNING: Title underline too short.

rdkit.ML.InfoTheory.rdInfoTheory module
======================================
WARNING: autodoc: failed to import module 'ML.InfoTheory.rdInfoTheory' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.CrossValidate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.DistFunctions' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.KNNClassificationModel' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.KNNModel' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.KNNRegressionModel' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.MLUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.MLUtils.VoteImg' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.MatOps' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.ModelPackage' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.ModelPackage.PackageUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.ModelPackage.Packager' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.NaiveBayes' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.NaiveBayes.ClassificationModel' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.NaiveBayes.CrossValidate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.ActFuncs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.CrossValidate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.NetNode' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.Network' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.Trainers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.SLT' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.SLT.Risk' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Scoring' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Scoring.Scoring' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.ScreenComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.files' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Numerics' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Numerics.rdAlignment' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'RDConfig' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'RDLogger' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'RDPaths' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'RDRandom' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'SimDivFilters' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'SimDivFilters.SimilarityPickers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'SimDivFilters.rdSimDivPickers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'TestRunner' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.Filter' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.Node' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.DbMolSupply' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.DbPickleSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.SDSupply' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.SmartsMolFilter' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.SmartsRemover' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.SmilesDupeFilter' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.SmilesOutput' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.SmilesSupply' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.demo' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.Output' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.Supply' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.Transform' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdBase' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'six' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.cactvs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.chemdraw' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.chemdraw_qax' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.chemutils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.comhack' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.fileutils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.listutils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.spiral' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
looking for now-outdated files... none found
pickling environment... done
checking consistency... /<<PKGBUILDDIR>>/Docs/Book/source/modules.rst: WARNING: document isn't included in any toctree
done
preparing documents... done
writing output... [  0%] BackwardsIncompatibleChanges
writing output... [  0%] Cartridge
writing output... [  0%] Cookbook
writing output... [  1%] GettingStartedInPython
writing output... [  1%] Install
writing output... [  1%] Overview
writing output... [  2%] RDKit_Book
writing output... [  2%] api-docs
writing output... [  2%] index
writing output... [  3%] source/modules
writing output... [  3%] source/rdkit
writing output... [  3%] source/rdkit.Avalon
writing output... [  4%] source/rdkit.Avalon.pyAvalonTools
writing output... [  4%] source/rdkit.Chem
writing output... [  4%] source/rdkit.Chem.AllChem
writing output... [  5%] source/rdkit.Chem.AtomPairs
writing output... [  5%] source/rdkit.Chem.AtomPairs.Pairs
writing output... [  5%] source/rdkit.Chem.AtomPairs.Sheridan
writing output... [  6%] source/rdkit.Chem.AtomPairs.Torsions
writing output... [  6%] source/rdkit.Chem.AtomPairs.Utils
writing output... [  6%] source/rdkit.Chem.BRICS
writing output... [  7%] source/rdkit.Chem.BuildFragmentCatalog
writing output... [  7%] source/rdkit.Chem.ChemUtils
writing output... [  7%] source/rdkit.Chem.ChemUtils.AlignDepict
writing output... [  8%] source/rdkit.Chem.ChemUtils.BulkTester
writing output... [  8%] source/rdkit.Chem.ChemUtils.DescriptorUtilities
writing output... [  8%] source/rdkit.Chem.ChemUtils.SDFToCSV
writing output... [  9%] source/rdkit.Chem.ChemUtils.TemplateExpand
writing output... [  9%] source/rdkit.Chem.ChemicalFeatures
writing output... [  9%] source/rdkit.Chem.ChemicalForceFields
writing output... [ 10%] source/rdkit.Chem.Crippen
writing output... [ 10%] source/rdkit.Chem.DSViewer
writing output... [ 10%] source/rdkit.Chem.Descriptors
writing output... [ 11%] source/rdkit.Chem.Descriptors3D
writing output... [ 11%] source/rdkit.Chem.Draw
writing output... [ 11%] source/rdkit.Chem.Draw.IPythonConsole
writing output... [ 12%] source/rdkit.Chem.Draw.MolDrawing
writing output... [ 12%] source/rdkit.Chem.Draw.SimilarityMaps
writing output... [ 12%] source/rdkit.Chem.Draw.aggCanvas
writing output... [ 13%] source/rdkit.Chem.Draw.cairoCanvas
writing output... [ 13%] source/rdkit.Chem.Draw.canvasbase
writing output... [ 13%] source/rdkit.Chem.Draw.mplCanvas
writing output... [ 14%] source/rdkit.Chem.Draw.qtCanvas
writing output... [ 14%] source/rdkit.Chem.Draw.rdMolDraw2D
writing output... [ 14%] source/rdkit.Chem.EState
writing output... [ 15%] source/rdkit.Chem.EState.AtomTypes
writing output... [ 15%] source/rdkit.Chem.EState.EState
writing output... [ 15%] source/rdkit.Chem.EState.EState_VSA
writing output... [ 16%] source/rdkit.Chem.EState.Fingerprinter
writing output... [ 16%] source/rdkit.Chem.EnumerateHeterocycles
writing output... [ 16%] source/rdkit.Chem.EnumerateStereoisomers
writing output... [ 17%] source/rdkit.Chem.FastSDMolSupplier
writing output... [ 17%] source/rdkit.Chem.FeatFinderCLI
writing output... [ 17%] source/rdkit.Chem.FeatMaps
writing output... [ 18%] source/rdkit.Chem.FeatMaps.FeatMapParser
writing output... [ 18%] source/rdkit.Chem.FeatMaps.FeatMapPoint
writing output... [ 18%] source/rdkit.Chem.FeatMaps.FeatMapUtils
writing output... [ 19%] source/rdkit.Chem.FeatMaps.FeatMaps
writing output... [ 19%] source/rdkit.Chem.Features
writing output... [ 19%] source/rdkit.Chem.Features.FeatDirUtilsRD
writing output... [ 20%] source/rdkit.Chem.Features.ShowFeats
writing output... [ 20%] source/rdkit.Chem.FilterCatalog
writing output... [ 20%] source/rdkit.Chem.Fingerprints
writing output... [ 20%] source/rdkit.Chem.Fingerprints.ClusterMols
writing output... [ 21%] source/rdkit.Chem.Fingerprints.DbFpSupplier
writing output... [ 21%] source/rdkit.Chem.Fingerprints.FingerprintMols
writing output... [ 21%] source/rdkit.Chem.Fingerprints.MolSimilarity
writing output... [ 22%] source/rdkit.Chem.Fingerprints.SimilarityScreener
writing output... [ 22%] source/rdkit.Chem.Fraggle
writing output... [ 22%] source/rdkit.Chem.Fraggle.FraggleSim
writing output... [ 23%] source/rdkit.Chem.FragmentCatalog
writing output... [ 23%] source/rdkit.Chem.FragmentMatcher
writing output... [ 23%] source/rdkit.Chem.Fragments
writing output... [ 24%] source/rdkit.Chem.FunctionalGroups
writing output... [ 24%] source/rdkit.Chem.GraphDescriptors
writing output... [ 24%] source/rdkit.Chem.Graphs
writing output... [ 25%] source/rdkit.Chem.Lipinski
writing output... [ 25%] source/rdkit.Chem.MACCSkeys
writing output... [ 25%] source/rdkit.Chem.MCS
writing output... [ 26%] source/rdkit.Chem.MolCatalog
writing output... [ 26%] source/rdkit.Chem.MolDb
writing output... [ 26%] source/rdkit.Chem.MolDb.FingerprintUtils
writing output... [ 27%] source/rdkit.Chem.MolDb.Loader
writing output... [ 27%] source/rdkit.Chem.MolDb.Loader_orig
writing output... [ 27%] source/rdkit.Chem.MolDb.Loader_sa
writing output... [ 28%] source/rdkit.Chem.MolKey
writing output... [ 28%] source/rdkit.Chem.MolKey.InchiInfo
writing output... [ 28%] source/rdkit.Chem.MolKey.MolKey
writing output... [ 29%] source/rdkit.Chem.MolStandardize
writing output... [ 29%] source/rdkit.Chem.MolStandardize.rdMolStandardize
writing output... [ 29%] source/rdkit.Chem.MolSurf
writing output... [ 30%] source/rdkit.Chem.PandasTools
writing output... [ 30%] source/rdkit.Chem.PeriodicTable
writing output... [ 30%] source/rdkit.Chem.Pharm2D
writing output... [ 31%] source/rdkit.Chem.Pharm2D.Generate
writing output... [ 31%] source/rdkit.Chem.Pharm2D.Gobbi_Pharm2D
writing output... [ 31%] source/rdkit.Chem.Pharm2D.LazyGenerator
writing output... [ 32%] source/rdkit.Chem.Pharm2D.Matcher
writing output... [ 32%] source/rdkit.Chem.Pharm2D.SigFactory
writing output... [ 32%] source/rdkit.Chem.Pharm2D.Utils
writing output... [ 33%] source/rdkit.Chem.Pharm3D
writing output... [ 33%] source/rdkit.Chem.Pharm3D.EmbedLib
writing output... [ 33%] source/rdkit.Chem.Pharm3D.ExcludedVolume
writing output... [ 34%] source/rdkit.Chem.Pharm3D.Pharmacophore
writing output... [ 34%] source/rdkit.Chem.PropertyMol
writing output... [ 34%] source/rdkit.Chem.PyMol
writing output... [ 35%] source/rdkit.Chem.QED
writing output... [ 35%] source/rdkit.Chem.Randomize
writing output... [ 35%] source/rdkit.Chem.Recap
writing output... [ 36%] source/rdkit.Chem.ReducedGraphs
writing output... [ 36%] source/rdkit.Chem.SATIS
writing output... [ 36%] source/rdkit.Chem.SaltRemover
writing output... [ 37%] source/rdkit.Chem.Scaffolds
writing output... [ 37%] source/rdkit.Chem.Scaffolds.MurckoScaffold
writing output... [ 37%] source/rdkit.Chem.Scaffolds.ScaffoldTree
writing output... [ 38%] source/rdkit.Chem.ShowMols
writing output... [ 38%] source/rdkit.Chem.SimpleEnum
writing output... [ 38%] source/rdkit.Chem.SimpleEnum.Enumerator
writing output... [ 39%] source/rdkit.Chem.Subshape
writing output... [ 39%] source/rdkit.Chem.Subshape.BuilderUtils
writing output... [ 39%] source/rdkit.Chem.Subshape.SubshapeAligner
writing output... [ 40%] source/rdkit.Chem.Subshape.SubshapeBuilder
writing output... [ 40%] source/rdkit.Chem.Subshape.SubshapeObjects
writing output... [ 40%] source/rdkit.Chem.Subshape.testCombined
writing output... [ 40%] source/rdkit.Chem.Suppliers
writing output... [ 41%] source/rdkit.Chem.Suppliers.DbMolSupplier
writing output... [ 41%] source/rdkit.Chem.Suppliers.MolSupplier
writing output... [ 41%] source/rdkit.Chem.TemplateAlign
writing output... [ 42%] source/rdkit.Chem.TorsionFingerprints
writing output... [ 42%] source/rdkit.Chem.fmcs
writing output... [ 42%] source/rdkit.Chem.fmcs.fmcs
writing output... [ 43%] source/rdkit.Chem.inchi
writing output... [ 43%] source/rdkit.Chem.rdChemReactions
writing output... [ 43%] source/rdkit.Chem.rdChemicalFeatures
writing output... [ 44%] source/rdkit.Chem.rdCoordGen
writing output... [ 44%] source/rdkit.Chem.rdDepictor
writing output... [ 44%] source/rdkit.Chem.rdDistGeom
writing output... [ 45%] source/rdkit.Chem.rdFMCS
writing output... [ 45%] source/rdkit.Chem.rdFingerprintGenerator
writing output... [ 45%] source/rdkit.Chem.rdForceFieldHelpers
writing output... [ 46%] source/rdkit.Chem.rdFreeSASA
writing output... [ 46%] source/rdkit.Chem.rdMMPA
writing output... [ 46%] source/rdkit.Chem.rdMolAlign
writing output... [ 47%] source/rdkit.Chem.rdMolCatalog
writing output... [ 47%] source/rdkit.Chem.rdMolChemicalFeatures
writing output... [ 47%] source/rdkit.Chem.rdMolDescriptors
writing output... [ 48%] source/rdkit.Chem.rdMolHash
writing output... [ 48%] source/rdkit.Chem.rdMolInterchange
writing output... [ 48%] source/rdkit.Chem.rdMolTransforms
writing output... [ 49%] source/rdkit.Chem.rdPartialCharges
writing output... [ 49%] source/rdkit.Chem.rdRGroupDecomposition
writing output... [ 49%] source/rdkit.Chem.rdReducedGraphs
writing output... [ 50%] source/rdkit.Chem.rdSLNParse
writing output... [ 50%] source/rdkit.Chem.rdShapeHelpers
writing output... [ 50%] source/rdkit.Chem.rdStructChecker
writing output... [ 51%] source/rdkit.Chem.rdSubstructLibrary
writing output... [ 51%] source/rdkit.Chem.rdchem
writing output... [ 51%] source/rdkit.Chem.rdfiltercatalog
writing output... [ 52%] source/rdkit.Chem.rdfragcatalog
writing output... [ 52%] source/rdkit.Chem.rdinchi
writing output... [ 52%] source/rdkit.Chem.rdmolfiles
writing output... [ 53%] source/rdkit.Chem.rdmolops
writing output... [ 53%] source/rdkit.Chem.rdqueries
writing output... [ 53%] source/rdkit.Chem.rdtrajectory
writing output... [ 54%] source/rdkit.DataManip
writing output... [ 54%] source/rdkit.DataManip.Metric
writing output... [ 54%] source/rdkit.DataManip.Metric.rdMetricMatrixCalc
writing output... [ 55%] source/rdkit.DataStructs
writing output... [ 55%] source/rdkit.DataStructs.BitEnsemble
writing output... [ 55%] source/rdkit.DataStructs.BitEnsembleDb
writing output... [ 56%] source/rdkit.DataStructs.BitUtils
writing output... [ 56%] source/rdkit.DataStructs.HierarchyVis
writing output... [ 56%] source/rdkit.DataStructs.LazySignature
writing output... [ 57%] source/rdkit.DataStructs.TopNContainer
writing output... [ 57%] source/rdkit.DataStructs.VectCollection
writing output... [ 57%] source/rdkit.DataStructs.cDataStructs
writing output... [ 58%] source/rdkit.Dbase
writing output... [ 58%] source/rdkit.Dbase.DbConnection
writing output... [ 58%] source/rdkit.Dbase.DbInfo
writing output... [ 59%] source/rdkit.Dbase.DbModule
writing output... [ 59%] source/rdkit.Dbase.DbReport
writing output... [ 59%] source/rdkit.Dbase.DbResultSet
writing output... [ 60%] source/rdkit.Dbase.DbUtils
writing output... [ 60%] source/rdkit.Dbase.StorageUtils
writing output... [ 60%] source/rdkit.DistanceGeometry
writing output... [ 60%] source/rdkit.DistanceGeometry.DistGeom
writing output... [ 61%] source/rdkit.ForceField
writing output... [ 61%] source/rdkit.ForceField.rdForceField
writing output... [ 61%] source/rdkit.Geometry
writing output... [ 62%] source/rdkit.Geometry.rdGeometry
writing output... [ 62%] source/rdkit.ML
writing output... [ 62%] source/rdkit.ML.AnalyzeComposite
writing output... [ 63%] source/rdkit.ML.BuildComposite
writing output... [ 63%] source/rdkit.ML.Cluster
writing output... [ 63%] source/rdkit.ML.Cluster.Butina
writing output... [ 64%] source/rdkit.ML.Cluster.ClusterUtils
writing output... [ 64%] source/rdkit.ML.Cluster.ClusterVis
writing output... [ 64%] source/rdkit.ML.Cluster.Clustering
writing output... [ 65%] source/rdkit.ML.Cluster.Clusters
writing output... [ 65%] source/rdkit.ML.Cluster.Murtagh
writing output... [ 65%] source/rdkit.ML.Cluster.Resemblance
writing output... [ 66%] source/rdkit.ML.Cluster.Standardize
writing output... [ 66%] source/rdkit.ML.Composite
writing output... [ 66%] source/rdkit.ML.Composite.AdjustComposite
writing output... [ 67%] source/rdkit.ML.Composite.BayesComposite
writing output... [ 67%] source/rdkit.ML.Composite.Composite
writing output... [ 67%] source/rdkit.ML.CompositeRun
writing output... [ 68%] source/rdkit.ML.Data
writing output... [ 68%] source/rdkit.ML.Data.DataUtils
writing output... [ 68%] source/rdkit.ML.Data.FindQuantBounds
writing output... [ 69%] source/rdkit.ML.Data.MLData
writing output... [ 69%] source/rdkit.ML.Data.Quantize
writing output... [ 69%] source/rdkit.ML.Data.SplitData
writing output... [ 70%] source/rdkit.ML.Data.Stats
writing output... [ 70%] source/rdkit.ML.Data.Transforms
writing output... [ 70%] source/rdkit.ML.DecTree
writing output... [ 71%] source/rdkit.ML.DecTree.BuildQuantTree
writing output... [ 71%] source/rdkit.ML.DecTree.BuildSigTree
writing output... [ 71%] source/rdkit.ML.DecTree.CrossValidate
writing output... [ 72%] source/rdkit.ML.DecTree.DecTree
writing output... [ 72%] source/rdkit.ML.DecTree.Forest
writing output... [ 72%] source/rdkit.ML.DecTree.ID3
writing output... [ 73%] source/rdkit.ML.DecTree.PruneTree
writing output... [ 73%] source/rdkit.ML.DecTree.QuantTree
writing output... [ 73%] source/rdkit.ML.DecTree.SigTree
writing output... [ 74%] source/rdkit.ML.DecTree.Tree
writing output... [ 74%] source/rdkit.ML.DecTree.TreeUtils
writing output... [ 74%] source/rdkit.ML.DecTree.TreeVis
writing output... [ 75%] source/rdkit.ML.DecTree.randomtest
writing output... [ 75%] source/rdkit.ML.Descriptors
writing output... [ 75%] source/rdkit.ML.Descriptors.CompoundDescriptors
writing output... [ 76%] source/rdkit.ML.Descriptors.Descriptors
writing output... [ 76%] source/rdkit.ML.Descriptors.MoleculeDescriptors
writing output... [ 76%] source/rdkit.ML.Descriptors.Parser
writing output... [ 77%] source/rdkit.ML.EnrichPlot
writing output... [ 77%] source/rdkit.ML.GrowComposite
writing output... [ 77%] source/rdkit.ML.InfoTheory
writing output... [ 78%] source/rdkit.ML.InfoTheory.BitClusterer
writing output... [ 78%] source/rdkit.ML.InfoTheory.BitRank
writing output... [ 78%] source/rdkit.ML.InfoTheory.entropy
writing output... [ 79%] source/rdkit.ML.InfoTheory.rdInfoTheory
writing output... [ 79%] source/rdkit.ML.KNN
writing output... [ 79%] source/rdkit.ML.KNN.CrossValidate
writing output... [ 80%] source/rdkit.ML.KNN.DistFunctions
writing output... [ 80%] source/rdkit.ML.KNN.KNNClassificationModel
writing output... [ 80%] source/rdkit.ML.KNN.KNNModel
writing output... [ 80%] source/rdkit.ML.KNN.KNNRegressionModel
writing output... [ 81%] source/rdkit.ML.MLUtils
writing output... [ 81%] source/rdkit.ML.MLUtils.VoteImg
writing output... [ 81%] source/rdkit.ML.MatOps
writing output... [ 82%] source/rdkit.ML.ModelPackage
writing output... [ 82%] source/rdkit.ML.ModelPackage.PackageUtils
writing output... [ 82%] source/rdkit.ML.ModelPackage.Packager
writing output... [ 83%] source/rdkit.ML.NaiveBayes
writing output... [ 83%] source/rdkit.ML.NaiveBayes.ClassificationModel
writing output... [ 83%] source/rdkit.ML.NaiveBayes.CrossValidate
writing output... [ 84%] source/rdkit.ML.Neural
writing output... [ 84%] source/rdkit.ML.Neural.ActFuncs
writing output... [ 84%] source/rdkit.ML.Neural.CrossValidate
writing output... [ 85%] source/rdkit.ML.Neural.NetNode
writing output... [ 85%] source/rdkit.ML.Neural.Network
writing output... [ 85%] source/rdkit.ML.Neural.Trainers
writing output... [ 86%] source/rdkit.ML.SLT
writing output... [ 86%] source/rdkit.ML.SLT.Risk
writing output... [ 86%] source/rdkit.ML.Scoring
writing output... [ 87%] source/rdkit.ML.Scoring.Scoring
writing output... [ 87%] source/rdkit.ML.ScreenComposite
writing output... [ 87%] source/rdkit.ML.files
writing output... [ 88%] source/rdkit.Numerics
writing output... [ 88%] source/rdkit.Numerics.rdAlignment
writing output... [ 88%] source/rdkit.RDConfig
writing output... [ 89%] source/rdkit.RDLogger
writing output... [ 89%] source/rdkit.RDPaths
writing output... [ 89%] source/rdkit.RDRandom
writing output... [ 90%] source/rdkit.SimDivFilters
writing output... [ 90%] source/rdkit.SimDivFilters.SimilarityPickers
writing output... [ 90%] source/rdkit.SimDivFilters.rdSimDivPickers
writing output... [ 91%] source/rdkit.TestRunner
writing output... [ 91%] source/rdkit.VLib
writing output... [ 91%] source/rdkit.VLib.Filter
writing output... [ 92%] source/rdkit.VLib.Node
writing output... [ 92%] source/rdkit.VLib.NodeLib
writing output... [ 92%] source/rdkit.VLib.NodeLib.DbMolSupply
writing output... [ 93%] source/rdkit.VLib.NodeLib.DbPickleSupplier
writing output... [ 93%] source/rdkit.VLib.NodeLib.SDSupply
writing output... [ 93%] source/rdkit.VLib.NodeLib.SmartsMolFilter
writing output... [ 94%] source/rdkit.VLib.NodeLib.SmartsRemover
writing output... [ 94%] source/rdkit.VLib.NodeLib.SmilesDupeFilter
writing output... [ 94%] source/rdkit.VLib.NodeLib.SmilesOutput
writing output... [ 95%] source/rdkit.VLib.NodeLib.SmilesSupply
writing output... [ 95%] source/rdkit.VLib.NodeLib.demo
writing output... [ 95%] source/rdkit.VLib.Output
writing output... [ 96%] source/rdkit.VLib.Supply
writing output... [ 96%] source/rdkit.VLib.Transform
writing output... [ 96%] source/rdkit.rdBase
writing output... [ 97%] source/rdkit.six
writing output... [ 97%] source/rdkit.utils
writing output... [ 97%] source/rdkit.utils.cactvs
writing output... [ 98%] source/rdkit.utils.chemdraw
writing output... [ 98%] source/rdkit.utils.chemdraw_qax
writing output... [ 98%] source/rdkit.utils.chemutils
writing output... [ 99%] source/rdkit.utils.comhack
writing output... [ 99%] source/rdkit.utils.fileutils
writing output... [ 99%] source/rdkit.utils.listutils
writing output... [100%] source/rdkit.utils.spiral

/<<PKGBUILDDIR>>/Docs/Book/Install.md: WARNING: Pygments lexer name 'shellsession' is not known
/<<PKGBUILDDIR>>/Docs/Book/Install.md: WARNING: Pygments lexer name 'shellsession' is not known
/<<PKGBUILDDIR>>/Docs/Book/Install.md: WARNING: Pygments lexer name 'shellsession' is not known
/<<PKGBUILDDIR>>/Docs/Book/Install.md: WARNING: Pygments lexer name 'shellsession' is not known
/<<PKGBUILDDIR>>/Docs/Book/Install.md: WARNING: Pygments lexer name 'shellsession' is not known
/<<PKGBUILDDIR>>/Docs/Book/Install.md: WARNING: Pygments lexer name 'shellsession' is not known
generating indices...  genindexdone
writing additional pages...  searchdone
copying images... [  2%] images/indole1.png
copying images... [  5%] images/similarity_map_rf.png
copying images... [  7%] images/picture_1.png
copying images... [ 10%] images/picture_0.png
copying images... [ 12%] images/picture_3.png
copying images... [ 15%] images/picture_2.png
copying images... [ 17%] images/picture_4.png
copying images... [ 20%] images/cdk2_mol1.png
copying images... [ 22%] images/cdk2_mol2.png
copying images... [ 25%] images/cdk2_molgrid.png
copying images... [ 27%] images/cdk2_molgrid_aligned.png
copying images... [ 30%] images/mfp2_bit872.svg
copying images... [ 32%] images/rdk_bit1553.svg
copying images... [ 35%] images/rdk_bit1553_2.svg
copying images... [ 37%] images/similarity_map_fp1.png
copying images... [ 40%] images/similarity_map_fp2.png
copying images... [ 42%] images/similarity_map_fp3.png
copying images... [ 45%] images/similarity_map_charges.png
copying images... [ 47%] images/similarity_map_crippen.png
copying images... [ 50%] images/picture_6.png
copying images... [ 52%] images/picture_5.png
copying images... [ 55%] images/picture_9.png
copying images... [ 57%] images/picture_8.png
copying images... [ 60%] images/picture_7.png
copying images... [ 62%] images/picture_10.png
copying images... [ 65%] images/picture_12.png
copying images... [ 67%] images/picture_11.png
copying images... [ 70%] images/picture_10.jpg
copying images... [ 72%] ../Code/images/enhanced_stereo_and1_and2_base.png
copying images... [ 75%] ../Code/images/enhanced_stereo_and1_and2_expand.png
copying images... [ 77%] ../Code/images/enhanced_stereo_and1_cis_base.png
copying images... [ 80%] ../Code/images/enhanced_stereo_and1_cis_expand.png
copying images... [ 82%] ../Code/images/enhanced_stereo_and1_trans_base.png
copying images... [ 85%] ../Code/images/enhanced_stereo_and1_trans_expand.png
copying images... [ 87%] ../Code/images/enhanced_stereo_or1_or2_base.png
copying images... [ 90%] ../Code/images/enhanced_stereo_or1_cis_base.png
copying images... [ 92%] ../Code/images/enhanced_stereo_or1_trans_base.png
copying images... [ 95%] ../Code/images/enhanced_stereo_abs_and_base.png
copying images... [ 97%] ../Code/images/enhanced_stereo_abs_and_expand.png
copying images... [100%] ../Code/images/enhanced_stereo_abs_or_base.png

copying static files... ... done
copying extra files... done
dumping search index in English (code: en)... done
dumping object inventory... done
build succeeded, 315 warnings.

The HTML pages are in _build/html.

Build finished. The HTML pages are in _build/html.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/Docs/Book'
(cd /<<PKGBUILDDIR>>/Docs/Book; RDBASE=/<<PKGBUILDDIR>> /usr/bin/make latexpdf)
make[2]: Entering directory '/<<PKGBUILDDIR>>/Docs/Book'
mkdir -p _build/html/cppapi
cp -r /<<PKGBUILDDIR>>/Code/docs/*  _build/html/cppapi
sphinx-build -b latex -d _build/doctrees   . _build/latex
Running Sphinx v2.4.3
making output directory... done
WARNING: html_static_path entry '_static' does not exist
loading pickled environment... done
building [mo]: targets for 0 po files that are out of date
building [latex]: all documents
updating environment: [config changed ('source_parsers')] 305 added, 0 changed, 0 removed
reading sources... [  0%] BackwardsIncompatibleChanges
reading sources... [  0%] Cartridge
reading sources... [  0%] Cookbook
reading sources... [  1%] GettingStartedInPython
reading sources... [  1%] Install
reading sources... [  1%] Overview
reading sources... [  2%] RDKit_Book
reading sources... [  2%] api-docs
reading sources... [  2%] index
reading sources... [  3%] source/modules
reading sources... [  3%] source/rdkit
reading sources... [  3%] source/rdkit.Avalon
reading sources... [  4%] source/rdkit.Avalon.pyAvalonTools
reading sources... [  4%] source/rdkit.Chem
reading sources... [  4%] source/rdkit.Chem.AllChem
reading sources... [  5%] source/rdkit.Chem.AtomPairs
reading sources... [  5%] source/rdkit.Chem.AtomPairs.Pairs
reading sources... [  5%] source/rdkit.Chem.AtomPairs.Sheridan
reading sources... [  6%] source/rdkit.Chem.AtomPairs.Torsions
reading sources... [  6%] source/rdkit.Chem.AtomPairs.Utils
reading sources... [  6%] source/rdkit.Chem.BRICS
reading sources... [  7%] source/rdkit.Chem.BuildFragmentCatalog
reading sources... [  7%] source/rdkit.Chem.ChemUtils
reading sources... [  7%] source/rdkit.Chem.ChemUtils.AlignDepict
reading sources... [  8%] source/rdkit.Chem.ChemUtils.BulkTester
reading sources... [  8%] source/rdkit.Chem.ChemUtils.DescriptorUtilities
reading sources... [  8%] source/rdkit.Chem.ChemUtils.SDFToCSV
reading sources... [  9%] source/rdkit.Chem.ChemUtils.TemplateExpand
reading sources... [  9%] source/rdkit.Chem.ChemicalFeatures
reading sources... [  9%] source/rdkit.Chem.ChemicalForceFields
reading sources... [ 10%] source/rdkit.Chem.Crippen
reading sources... [ 10%] source/rdkit.Chem.DSViewer
reading sources... [ 10%] source/rdkit.Chem.Descriptors
reading sources... [ 11%] source/rdkit.Chem.Descriptors3D
reading sources... [ 11%] source/rdkit.Chem.Draw
reading sources... [ 11%] source/rdkit.Chem.Draw.IPythonConsole
reading sources... [ 12%] source/rdkit.Chem.Draw.MolDrawing
reading sources... [ 12%] source/rdkit.Chem.Draw.SimilarityMaps
reading sources... [ 12%] source/rdkit.Chem.Draw.aggCanvas
reading sources... [ 13%] source/rdkit.Chem.Draw.cairoCanvas
reading sources... [ 13%] source/rdkit.Chem.Draw.canvasbase
reading sources... [ 13%] source/rdkit.Chem.Draw.mplCanvas
reading sources... [ 14%] source/rdkit.Chem.Draw.qtCanvas
reading sources... [ 14%] source/rdkit.Chem.Draw.rdMolDraw2D
reading sources... [ 14%] source/rdkit.Chem.EState
reading sources... [ 15%] source/rdkit.Chem.EState.AtomTypes
reading sources... [ 15%] source/rdkit.Chem.EState.EState
reading sources... [ 15%] source/rdkit.Chem.EState.EState_VSA
reading sources... [ 16%] source/rdkit.Chem.EState.Fingerprinter
reading sources... [ 16%] source/rdkit.Chem.EnumerateHeterocycles
reading sources... [ 16%] source/rdkit.Chem.EnumerateStereoisomers
reading sources... [ 17%] source/rdkit.Chem.FastSDMolSupplier
reading sources... [ 17%] source/rdkit.Chem.FeatFinderCLI
reading sources... [ 17%] source/rdkit.Chem.FeatMaps
reading sources... [ 18%] source/rdkit.Chem.FeatMaps.FeatMapParser
reading sources... [ 18%] source/rdkit.Chem.FeatMaps.FeatMapPoint
reading sources... [ 18%] source/rdkit.Chem.FeatMaps.FeatMapUtils
reading sources... [ 19%] source/rdkit.Chem.FeatMaps.FeatMaps
reading sources... [ 19%] source/rdkit.Chem.Features
reading sources... [ 19%] source/rdkit.Chem.Features.FeatDirUtilsRD
reading sources... [ 20%] source/rdkit.Chem.Features.ShowFeats
reading sources... [ 20%] source/rdkit.Chem.FilterCatalog
reading sources... [ 20%] source/rdkit.Chem.Fingerprints
reading sources... [ 20%] source/rdkit.Chem.Fingerprints.ClusterMols
reading sources... [ 21%] source/rdkit.Chem.Fingerprints.DbFpSupplier
reading sources... [ 21%] source/rdkit.Chem.Fingerprints.FingerprintMols
reading sources... [ 21%] source/rdkit.Chem.Fingerprints.MolSimilarity
reading sources... [ 22%] source/rdkit.Chem.Fingerprints.SimilarityScreener
reading sources... [ 22%] source/rdkit.Chem.Fraggle
reading sources... [ 22%] source/rdkit.Chem.Fraggle.FraggleSim
reading sources... [ 23%] source/rdkit.Chem.FragmentCatalog
reading sources... [ 23%] source/rdkit.Chem.FragmentMatcher
reading sources... [ 23%] source/rdkit.Chem.Fragments
reading sources... [ 24%] source/rdkit.Chem.FunctionalGroups
reading sources... [ 24%] source/rdkit.Chem.GraphDescriptors
reading sources... [ 24%] source/rdkit.Chem.Graphs
reading sources... [ 25%] source/rdkit.Chem.Lipinski
reading sources... [ 25%] source/rdkit.Chem.MACCSkeys
reading sources... [ 25%] source/rdkit.Chem.MCS
reading sources... [ 26%] source/rdkit.Chem.MolCatalog
reading sources... [ 26%] source/rdkit.Chem.MolDb
reading sources... [ 26%] source/rdkit.Chem.MolDb.FingerprintUtils
reading sources... [ 27%] source/rdkit.Chem.MolDb.Loader
reading sources... [ 27%] source/rdkit.Chem.MolDb.Loader_orig
reading sources... [ 27%] source/rdkit.Chem.MolDb.Loader_sa
reading sources... [ 28%] source/rdkit.Chem.MolKey
reading sources... [ 28%] source/rdkit.Chem.MolKey.InchiInfo
reading sources... [ 28%] source/rdkit.Chem.MolKey.MolKey
reading sources... [ 29%] source/rdkit.Chem.MolStandardize
reading sources... [ 29%] source/rdkit.Chem.MolStandardize.rdMolStandardize
reading sources... [ 29%] source/rdkit.Chem.MolSurf
reading sources... [ 30%] source/rdkit.Chem.PandasTools
reading sources... [ 30%] source/rdkit.Chem.PeriodicTable
reading sources... [ 30%] source/rdkit.Chem.Pharm2D
reading sources... [ 31%] source/rdkit.Chem.Pharm2D.Generate
reading sources... [ 31%] source/rdkit.Chem.Pharm2D.Gobbi_Pharm2D
reading sources... [ 31%] source/rdkit.Chem.Pharm2D.LazyGenerator
reading sources... [ 32%] source/rdkit.Chem.Pharm2D.Matcher
reading sources... [ 32%] source/rdkit.Chem.Pharm2D.SigFactory
reading sources... [ 32%] source/rdkit.Chem.Pharm2D.Utils
reading sources... [ 33%] source/rdkit.Chem.Pharm3D
reading sources... [ 33%] source/rdkit.Chem.Pharm3D.EmbedLib
reading sources... [ 33%] source/rdkit.Chem.Pharm3D.ExcludedVolume
reading sources... [ 34%] source/rdkit.Chem.Pharm3D.Pharmacophore
reading sources... [ 34%] source/rdkit.Chem.PropertyMol
reading sources... [ 34%] source/rdkit.Chem.PyMol
reading sources... [ 35%] source/rdkit.Chem.QED
reading sources... [ 35%] source/rdkit.Chem.Randomize
reading sources... [ 35%] source/rdkit.Chem.Recap
reading sources... [ 36%] source/rdkit.Chem.ReducedGraphs
reading sources... [ 36%] source/rdkit.Chem.SATIS
reading sources... [ 36%] source/rdkit.Chem.SaltRemover
reading sources... [ 37%] source/rdkit.Chem.Scaffolds
reading sources... [ 37%] source/rdkit.Chem.Scaffolds.MurckoScaffold
reading sources... [ 37%] source/rdkit.Chem.Scaffolds.ScaffoldTree
reading sources... [ 38%] source/rdkit.Chem.ShowMols
reading sources... [ 38%] source/rdkit.Chem.SimpleEnum
reading sources... [ 38%] source/rdkit.Chem.SimpleEnum.Enumerator
reading sources... [ 39%] source/rdkit.Chem.Subshape
reading sources... [ 39%] source/rdkit.Chem.Subshape.BuilderUtils
reading sources... [ 39%] source/rdkit.Chem.Subshape.SubshapeAligner
reading sources... [ 40%] source/rdkit.Chem.Subshape.SubshapeBuilder
reading sources... [ 40%] source/rdkit.Chem.Subshape.SubshapeObjects
reading sources... [ 40%] source/rdkit.Chem.Subshape.testCombined
reading sources... [ 40%] source/rdkit.Chem.Suppliers
reading sources... [ 41%] source/rdkit.Chem.Suppliers.DbMolSupplier
reading sources... [ 41%] source/rdkit.Chem.Suppliers.MolSupplier
reading sources... [ 41%] source/rdkit.Chem.TemplateAlign
reading sources... [ 42%] source/rdkit.Chem.TorsionFingerprints
reading sources... [ 42%] source/rdkit.Chem.fmcs
reading sources... [ 42%] source/rdkit.Chem.fmcs.fmcs
reading sources... [ 43%] source/rdkit.Chem.inchi
reading sources... [ 43%] source/rdkit.Chem.rdChemReactions
reading sources... [ 43%] source/rdkit.Chem.rdChemicalFeatures
reading sources... [ 44%] source/rdkit.Chem.rdCoordGen
reading sources... [ 44%] source/rdkit.Chem.rdDepictor
reading sources... [ 44%] source/rdkit.Chem.rdDistGeom
reading sources... [ 45%] source/rdkit.Chem.rdFMCS
reading sources... [ 45%] source/rdkit.Chem.rdFingerprintGenerator
reading sources... [ 45%] source/rdkit.Chem.rdForceFieldHelpers
reading sources... [ 46%] source/rdkit.Chem.rdFreeSASA
reading sources... [ 46%] source/rdkit.Chem.rdMMPA
reading sources... [ 46%] source/rdkit.Chem.rdMolAlign
reading sources... [ 47%] source/rdkit.Chem.rdMolCatalog
reading sources... [ 47%] source/rdkit.Chem.rdMolChemicalFeatures
reading sources... [ 47%] source/rdkit.Chem.rdMolDescriptors
reading sources... [ 48%] source/rdkit.Chem.rdMolHash
reading sources... [ 48%] source/rdkit.Chem.rdMolInterchange
reading sources... [ 48%] source/rdkit.Chem.rdMolTransforms
reading sources... [ 49%] source/rdkit.Chem.rdPartialCharges
reading sources... [ 49%] source/rdkit.Chem.rdRGroupDecomposition
reading sources... [ 49%] source/rdkit.Chem.rdReducedGraphs
reading sources... [ 50%] source/rdkit.Chem.rdSLNParse
reading sources... [ 50%] source/rdkit.Chem.rdShapeHelpers
reading sources... [ 50%] source/rdkit.Chem.rdStructChecker
reading sources... [ 51%] source/rdkit.Chem.rdSubstructLibrary
reading sources... [ 51%] source/rdkit.Chem.rdchem
reading sources... [ 51%] source/rdkit.Chem.rdfiltercatalog
reading sources... [ 52%] source/rdkit.Chem.rdfragcatalog
reading sources... [ 52%] source/rdkit.Chem.rdinchi
reading sources... [ 52%] source/rdkit.Chem.rdmolfiles
reading sources... [ 53%] source/rdkit.Chem.rdmolops
reading sources... [ 53%] source/rdkit.Chem.rdqueries
reading sources... [ 53%] source/rdkit.Chem.rdtrajectory
reading sources... [ 54%] source/rdkit.DataManip
reading sources... [ 54%] source/rdkit.DataManip.Metric
reading sources... [ 54%] source/rdkit.DataManip.Metric.rdMetricMatrixCalc
reading sources... [ 55%] source/rdkit.DataStructs
reading sources... [ 55%] source/rdkit.DataStructs.BitEnsemble
reading sources... [ 55%] source/rdkit.DataStructs.BitEnsembleDb
reading sources... [ 56%] source/rdkit.DataStructs.BitUtils
reading sources... [ 56%] source/rdkit.DataStructs.HierarchyVis
reading sources... [ 56%] source/rdkit.DataStructs.LazySignature
reading sources... [ 57%] source/rdkit.DataStructs.TopNContainer
reading sources... [ 57%] source/rdkit.DataStructs.VectCollection
reading sources... [ 57%] source/rdkit.DataStructs.cDataStructs
reading sources... [ 58%] source/rdkit.Dbase
reading sources... [ 58%] source/rdkit.Dbase.DbConnection
reading sources... [ 58%] source/rdkit.Dbase.DbInfo
reading sources... [ 59%] source/rdkit.Dbase.DbModule
reading sources... [ 59%] source/rdkit.Dbase.DbReport
reading sources... [ 59%] source/rdkit.Dbase.DbResultSet
reading sources... [ 60%] source/rdkit.Dbase.DbUtils
reading sources... [ 60%] source/rdkit.Dbase.StorageUtils
reading sources... [ 60%] source/rdkit.DistanceGeometry
reading sources... [ 60%] source/rdkit.DistanceGeometry.DistGeom
reading sources... [ 61%] source/rdkit.ForceField
reading sources... [ 61%] source/rdkit.ForceField.rdForceField
reading sources... [ 61%] source/rdkit.Geometry
reading sources... [ 62%] source/rdkit.Geometry.rdGeometry
reading sources... [ 62%] source/rdkit.ML
reading sources... [ 62%] source/rdkit.ML.AnalyzeComposite
reading sources... [ 63%] source/rdkit.ML.BuildComposite
reading sources... [ 63%] source/rdkit.ML.Cluster
reading sources... [ 63%] source/rdkit.ML.Cluster.Butina
reading sources... [ 64%] source/rdkit.ML.Cluster.ClusterUtils
reading sources... [ 64%] source/rdkit.ML.Cluster.ClusterVis
reading sources... [ 64%] source/rdkit.ML.Cluster.Clustering
reading sources... [ 65%] source/rdkit.ML.Cluster.Clusters
reading sources... [ 65%] source/rdkit.ML.Cluster.Murtagh
reading sources... [ 65%] source/rdkit.ML.Cluster.Resemblance
reading sources... [ 66%] source/rdkit.ML.Cluster.Standardize
reading sources... [ 66%] source/rdkit.ML.Composite
reading sources... [ 66%] source/rdkit.ML.Composite.AdjustComposite
reading sources... [ 67%] source/rdkit.ML.Composite.BayesComposite
reading sources... [ 67%] source/rdkit.ML.Composite.Composite
reading sources... [ 67%] source/rdkit.ML.CompositeRun
reading sources... [ 68%] source/rdkit.ML.Data
reading sources... [ 68%] source/rdkit.ML.Data.DataUtils
reading sources... [ 68%] source/rdkit.ML.Data.FindQuantBounds
reading sources... [ 69%] source/rdkit.ML.Data.MLData
reading sources... [ 69%] source/rdkit.ML.Data.Quantize
reading sources... [ 69%] source/rdkit.ML.Data.SplitData
reading sources... [ 70%] source/rdkit.ML.Data.Stats
reading sources... [ 70%] source/rdkit.ML.Data.Transforms
reading sources... [ 70%] source/rdkit.ML.DecTree
reading sources... [ 71%] source/rdkit.ML.DecTree.BuildQuantTree
reading sources... [ 71%] source/rdkit.ML.DecTree.BuildSigTree
reading sources... [ 71%] source/rdkit.ML.DecTree.CrossValidate
reading sources... [ 72%] source/rdkit.ML.DecTree.DecTree
reading sources... [ 72%] source/rdkit.ML.DecTree.Forest
reading sources... [ 72%] source/rdkit.ML.DecTree.ID3
reading sources... [ 73%] source/rdkit.ML.DecTree.PruneTree
reading sources... [ 73%] source/rdkit.ML.DecTree.QuantTree
reading sources... [ 73%] source/rdkit.ML.DecTree.SigTree
reading sources... [ 74%] source/rdkit.ML.DecTree.Tree
reading sources... [ 74%] source/rdkit.ML.DecTree.TreeUtils
reading sources... [ 74%] source/rdkit.ML.DecTree.TreeVis
reading sources... [ 75%] source/rdkit.ML.DecTree.randomtest
reading sources... [ 75%] source/rdkit.ML.Descriptors
reading sources... [ 75%] source/rdkit.ML.Descriptors.CompoundDescriptors
reading sources... [ 76%] source/rdkit.ML.Descriptors.Descriptors
reading sources... [ 76%] source/rdkit.ML.Descriptors.MoleculeDescriptors
reading sources... [ 76%] source/rdkit.ML.Descriptors.Parser
reading sources... [ 77%] source/rdkit.ML.EnrichPlot
reading sources... [ 77%] source/rdkit.ML.GrowComposite
reading sources... [ 77%] source/rdkit.ML.InfoTheory
reading sources... [ 78%] source/rdkit.ML.InfoTheory.BitClusterer
reading sources... [ 78%] source/rdkit.ML.InfoTheory.BitRank
reading sources... [ 78%] source/rdkit.ML.InfoTheory.entropy
reading sources... [ 79%] source/rdkit.ML.InfoTheory.rdInfoTheory
reading sources... [ 79%] source/rdkit.ML.KNN
reading sources... [ 79%] source/rdkit.ML.KNN.CrossValidate
reading sources... [ 80%] source/rdkit.ML.KNN.DistFunctions
reading sources... [ 80%] source/rdkit.ML.KNN.KNNClassificationModel
reading sources... [ 80%] source/rdkit.ML.KNN.KNNModel
reading sources... [ 80%] source/rdkit.ML.KNN.KNNRegressionModel
reading sources... [ 81%] source/rdkit.ML.MLUtils
reading sources... [ 81%] source/rdkit.ML.MLUtils.VoteImg
reading sources... [ 81%] source/rdkit.ML.MatOps
reading sources... [ 82%] source/rdkit.ML.ModelPackage
reading sources... [ 82%] source/rdkit.ML.ModelPackage.PackageUtils
reading sources... [ 82%] source/rdkit.ML.ModelPackage.Packager
reading sources... [ 83%] source/rdkit.ML.NaiveBayes
reading sources... [ 83%] source/rdkit.ML.NaiveBayes.ClassificationModel
reading sources... [ 83%] source/rdkit.ML.NaiveBayes.CrossValidate
reading sources... [ 84%] source/rdkit.ML.Neural
reading sources... [ 84%] source/rdkit.ML.Neural.ActFuncs
reading sources... [ 84%] source/rdkit.ML.Neural.CrossValidate
reading sources... [ 85%] source/rdkit.ML.Neural.NetNode
reading sources... [ 85%] source/rdkit.ML.Neural.Network
reading sources... [ 85%] source/rdkit.ML.Neural.Trainers
reading sources... [ 86%] source/rdkit.ML.SLT
reading sources... [ 86%] source/rdkit.ML.SLT.Risk
reading sources... [ 86%] source/rdkit.ML.Scoring
reading sources... [ 87%] source/rdkit.ML.Scoring.Scoring
reading sources... [ 87%] source/rdkit.ML.ScreenComposite
reading sources... [ 87%] source/rdkit.ML.files
reading sources... [ 88%] source/rdkit.Numerics
reading sources... [ 88%] source/rdkit.Numerics.rdAlignment
reading sources... [ 88%] source/rdkit.RDConfig
reading sources... [ 89%] source/rdkit.RDLogger
reading sources... [ 89%] source/rdkit.RDPaths
reading sources... [ 89%] source/rdkit.RDRandom
reading sources... [ 90%] source/rdkit.SimDivFilters
reading sources... [ 90%] source/rdkit.SimDivFilters.SimilarityPickers
reading sources... [ 90%] source/rdkit.SimDivFilters.rdSimDivPickers
reading sources... [ 91%] source/rdkit.TestRunner
reading sources... [ 91%] source/rdkit.VLib
reading sources... [ 91%] source/rdkit.VLib.Filter
reading sources... [ 92%] source/rdkit.VLib.Node
reading sources... [ 92%] source/rdkit.VLib.NodeLib
reading sources... [ 92%] source/rdkit.VLib.NodeLib.DbMolSupply
reading sources... [ 93%] source/rdkit.VLib.NodeLib.DbPickleSupplier
reading sources... [ 93%] source/rdkit.VLib.NodeLib.SDSupply
reading sources... [ 93%] source/rdkit.VLib.NodeLib.SmartsMolFilter
reading sources... [ 94%] source/rdkit.VLib.NodeLib.SmartsRemover
reading sources... [ 94%] source/rdkit.VLib.NodeLib.SmilesDupeFilter
reading sources... [ 94%] source/rdkit.VLib.NodeLib.SmilesOutput
reading sources... [ 95%] source/rdkit.VLib.NodeLib.SmilesSupply
reading sources... [ 95%] source/rdkit.VLib.NodeLib.demo
reading sources... [ 95%] source/rdkit.VLib.Output
reading sources... [ 96%] source/rdkit.VLib.Supply
reading sources... [ 96%] source/rdkit.VLib.Transform
reading sources... [ 96%] source/rdkit.rdBase
reading sources... [ 97%] source/rdkit.six
reading sources... [ 97%] source/rdkit.utils
reading sources... [ 97%] source/rdkit.utils.cactvs
reading sources... [ 98%] source/rdkit.utils.chemdraw
reading sources... [ 98%] source/rdkit.utils.chemdraw_qax
reading sources... [ 98%] source/rdkit.utils.chemutils
reading sources... [ 99%] source/rdkit.utils.comhack
reading sources... [ 99%] source/rdkit.utils.fileutils
reading sources... [ 99%] source/rdkit.utils.listutils
reading sources... [100%] source/rdkit.utils.spiral

/usr/lib/python3/dist-packages/sphinx/util/compat.py:30: RemovedInSphinx30Warning: The config variable "source_parsers" is deprecated. Please update your extension for the parser and remove the setting.
  warnings.warn('The config variable "source_parsers" is deprecated. '
/usr/lib/python3/dist-packages/sphinx/util/compat.py:36: RemovedInSphinx30Warning: app.add_source_parser() does not support suffix argument. Use app.add_source_suffix() instead.
  app.add_source_parser(suffix, parser)
/usr/lib/python3/dist-packages/recommonmark/parser.py:280: UserWarning: Unsupported inline type Hardbreak
  warn("Unsupported inline type " + inline.t)
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInPython.rst:2817: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/RDKit_Book.rst:208: WARNING: Title underline too short.

Ring closures
------------
/<<PKGBUILDDIR>>/Docs/Book/RDKit_Book.rst:208: WARNING: Title underline too short.

Ring closures
------------
WARNING: autodoc: failed to import module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Avalon' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Avalon.pyAvalonTools' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AllChem' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs.Pairs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs.Sheridan' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs.Torsions' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs.Utils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.BRICS' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.BuildFragmentCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils.AlignDepict' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils.BulkTester' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils.DescriptorUtilities' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils.SDFToCSV' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils.TemplateExpand' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemicalFeatures' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemicalForceFields' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Crippen' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.DSViewer' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Descriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Descriptors3D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.IPythonConsole' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.MolDrawing' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.SimilarityMaps' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.aggCanvas' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.cairoCanvas' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.canvasbase' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.mplCanvas' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.qtCanvas' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.rdMolDraw2D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState.AtomTypes' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState.EState' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState.EState_VSA' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState.Fingerprinter' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EnumerateHeterocycles' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EnumerateStereoisomers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FastSDMolSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatFinderCLI' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps.FeatMapParser' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps.FeatMapPoint' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps.FeatMapUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps.FeatMaps' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Features' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Features.FeatDirUtilsRD' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Features.ShowFeats' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FilterCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.ClusterMols' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.DbFpSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.FingerprintMols' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.MolSimilarity' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.SimilarityScreener' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fraggle' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fraggle.FraggleSim' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FragmentCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FragmentMatcher' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fragments' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FunctionalGroups' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.GraphDescriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Graphs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Lipinski' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MACCSkeys' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MCS' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb.FingerprintUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb.Loader' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb.Loader_orig' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb.Loader_sa' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolKey' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolKey.InchiInfo' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolKey.MolKey' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolStandardize.rdMolStandardize' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolSurf' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.PandasTools' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.PeriodicTable' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.Generate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.Gobbi_Pharm2D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.LazyGenerator' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.Matcher' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.SigFactory' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.Utils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm3D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm3D.EmbedLib' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm3D.ExcludedVolume' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm3D.Pharmacophore' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.PropertyMol' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.PyMol' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.QED' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Randomize' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Recap' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ReducedGraphs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.SATIS' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.SaltRemover' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Scaffolds' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Scaffolds.MurckoScaffold' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Scaffolds.ScaffoldTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ShowMols' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.SimpleEnum' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.SimpleEnum.Enumerator' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape.BuilderUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape.SubshapeAligner' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape.SubshapeBuilder' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape.SubshapeObjects' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape.testCombined' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Suppliers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Suppliers.DbMolSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Suppliers.MolSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.TemplateAlign' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.TorsionFingerprints' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.fmcs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.fmcs.fmcs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.inchi' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdChemReactions' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdChemicalFeatures.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdChemicalFeatures module
=================================
WARNING: autodoc: failed to import module 'Chem.rdChemicalFeatures' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdCoordGen' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdDepictor' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdDistGeom' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdFMCS' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdFingerprintGenerator' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdForceFieldHelpers.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdForceFieldHelpers module
=================================
WARNING: autodoc: failed to import module 'Chem.rdForceFieldHelpers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdFreeSASA' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMMPA' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMolAlign' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMolCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdMolChemicalFeatures.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdMolChemicalFeatures module
=================================
WARNING: autodoc: failed to import module 'Chem.rdMolChemicalFeatures' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdMolDescriptors.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdMolDescriptors module
=================================
WARNING: autodoc: failed to import module 'Chem.rdMolDescriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMolHash' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdMolInterchange.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdMolInterchange module
=================================
WARNING: autodoc: failed to import module 'Chem.rdMolInterchange' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMolTransforms' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdPartialCharges.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdPartialCharges module
=================================
WARNING: autodoc: failed to import module 'Chem.rdPartialCharges' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdRGroupDecomposition.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdRGroupDecomposition module
=================================
WARNING: autodoc: failed to import module 'Chem.rdRGroupDecomposition' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdReducedGraphs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdSLNParse' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdShapeHelpers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdStructChecker' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdSubstructLibrary.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdSubstructLibrary module
=================================
WARNING: autodoc: failed to import module 'Chem.rdSubstructLibrary' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdchem' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdfiltercatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdfragcatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdinchi' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdmolfiles' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdmolops' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdqueries' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdtrajectory' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataManip' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataManip.Metric' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataManip.Metric.rdMetricMatrixCalc' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.BitEnsemble' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.BitEnsembleDb' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.BitUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.HierarchyVis' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.LazySignature' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.TopNContainer' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.VectCollection' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.cDataStructs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbConnection' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbInfo' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbModule' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbReport' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbResultSet' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.StorageUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DistanceGeometry' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DistanceGeometry.DistGeom' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ForceField.rst:5: WARNING: Block quote ends without a blank line; unexpected unindent.
WARNING: autodoc: failed to import module 'ForceField' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ForceField.rdForceField' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Geometry' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Geometry.rdGeometry' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.AnalyzeComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.BuildComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Butina' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.ClusterUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.ClusterVis' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Clustering' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Clusters' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Murtagh' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Resemblance' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Standardize' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Composite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Composite.AdjustComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Composite.BayesComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Composite.Composite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.CompositeRun' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.DataUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.FindQuantBounds' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.MLData' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.Quantize' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.SplitData' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.Stats' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.Transforms' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.BuildQuantTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.BuildSigTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.CrossValidate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.DecTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.Forest' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.ID3' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.PruneTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.QuantTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.SigTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.Tree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.TreeUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.TreeVis' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.randomtest' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors.CompoundDescriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors.Descriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors.MoleculeDescriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors.Parser' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.EnrichPlot' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.GrowComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.InfoTheory' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.InfoTheory.BitClusterer' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.InfoTheory.BitRank' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.InfoTheory.entropy' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.InfoTheory.rdInfoTheory.rst:2: WARNING: Title underline too short.

rdkit.ML.InfoTheory.rdInfoTheory module
======================================
WARNING: autodoc: failed to import module 'ML.InfoTheory.rdInfoTheory' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.CrossValidate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.DistFunctions' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.KNNClassificationModel' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.KNNModel' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.KNNRegressionModel' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.MLUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.MLUtils.VoteImg' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.MatOps' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.ModelPackage' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.ModelPackage.PackageUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.ModelPackage.Packager' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.NaiveBayes' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.NaiveBayes.ClassificationModel' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.NaiveBayes.CrossValidate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.ActFuncs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.CrossValidate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.NetNode' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.Network' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.Trainers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.SLT' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.SLT.Risk' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Scoring' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Scoring.Scoring' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.ScreenComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.files' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Numerics' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Numerics.rdAlignment' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'RDConfig' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'RDLogger' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'RDPaths' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'RDRandom' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'SimDivFilters' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'SimDivFilters.SimilarityPickers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'SimDivFilters.rdSimDivPickers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'TestRunner' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.Filter' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.Node' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.DbMolSupply' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.DbPickleSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.SDSupply' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.SmartsMolFilter' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.SmartsRemover' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.SmilesDupeFilter' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.SmilesOutput' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.SmilesSupply' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.demo' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.Output' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.Supply' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.Transform' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdBase' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'six' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.cactvs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.chemdraw' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.chemdraw_qax' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.chemutils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.comhack' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.fileutils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.listutils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.spiral' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
looking for now-outdated files... none found
pickling environment... done
checking consistency... /<<PKGBUILDDIR>>/Docs/Book/source/modules.rst: WARNING: document isn't included in any toctree
done
processing RDKit.tex... index Overview Install GettingStartedInPython RDKit_Book Cookbook Cartridge BackwardsIncompatibleChanges api-docs source/rdkit source/rdkit.Avalon source/rdkit.Avalon.pyAvalonTools source/rdkit.Chem source/rdkit.Chem.AtomPairs source/rdkit.Chem.AtomPairs.Pairs source/rdkit.Chem.AtomPairs.Sheridan source/rdkit.Chem.AtomPairs.Torsions source/rdkit.Chem.AtomPairs.Utils source/rdkit.Chem.ChemUtils source/rdkit.Chem.ChemUtils.AlignDepict source/rdkit.Chem.ChemUtils.BulkTester source/rdkit.Chem.ChemUtils.DescriptorUtilities source/rdkit.Chem.ChemUtils.SDFToCSV source/rdkit.Chem.ChemUtils.TemplateExpand source/rdkit.Chem.Draw source/rdkit.Chem.Draw.IPythonConsole source/rdkit.Chem.Draw.MolDrawing source/rdkit.Chem.Draw.SimilarityMaps source/rdkit.Chem.Draw.rdMolDraw2D source/rdkit.Chem.Draw.aggCanvas source/rdkit.Chem.Draw.cairoCanvas source/rdkit.Chem.Draw.canvasbase source/rdkit.Chem.Draw.mplCanvas source/rdkit.Chem.Draw.qtCanvas source/rdkit.Chem.EState source/rdkit.Chem.EState.AtomTypes source/rdkit.Chem.EState.EState source/rdkit.Chem.EState.EState_VSA source/rdkit.Chem.EState.Fingerprinter source/rdkit.Chem.FeatMaps source/rdkit.Chem.FeatMaps.FeatMapParser source/rdkit.Chem.FeatMaps.FeatMapPoint source/rdkit.Chem.FeatMaps.FeatMapUtils source/rdkit.Chem.FeatMaps.FeatMaps source/rdkit.Chem.Features source/rdkit.Chem.Features.FeatDirUtilsRD source/rdkit.Chem.Features.ShowFeats source/rdkit.Chem.Fingerprints source/rdkit.Chem.Fingerprints.ClusterMols source/rdkit.Chem.Fingerprints.DbFpSupplier source/rdkit.Chem.Fingerprints.FingerprintMols source/rdkit.Chem.Fingerprints.MolSimilarity source/rdkit.Chem.Fingerprints.SimilarityScreener source/rdkit.Chem.Fraggle source/rdkit.Chem.Fraggle.FraggleSim source/rdkit.Chem.MolDb source/rdkit.Chem.MolDb.FingerprintUtils source/rdkit.Chem.MolDb.Loader source/rdkit.Chem.MolDb.Loader_orig source/rdkit.Chem.MolDb.Loader_sa source/rdkit.Chem.MolKey source/rdkit.Chem.MolKey.InchiInfo source/rdkit.Chem.MolKey.MolKey source/rdkit.Chem.Pharm2D source/rdkit.Chem.Pharm2D.Generate source/rdkit.Chem.Pharm2D.Gobbi_Pharm2D source/rdkit.Chem.Pharm2D.LazyGenerator source/rdkit.Chem.Pharm2D.Matcher source/rdkit.Chem.Pharm2D.SigFactory source/rdkit.Chem.Pharm2D.Utils source/rdkit.Chem.Pharm3D source/rdkit.Chem.Pharm3D.EmbedLib source/rdkit.Chem.Pharm3D.ExcludedVolume source/rdkit.Chem.Pharm3D.Pharmacophore source/rdkit.Chem.Scaffolds source/rdkit.Chem.Scaffolds.MurckoScaffold source/rdkit.Chem.Scaffolds.ScaffoldTree source/rdkit.Chem.SimpleEnum source/rdkit.Chem.SimpleEnum.Enumerator source/rdkit.Chem.Subshape source/rdkit.Chem.Subshape.BuilderUtils source/rdkit.Chem.Subshape.SubshapeAligner source/rdkit.Chem.Subshape.SubshapeBuilder source/rdkit.Chem.Subshape.SubshapeObjects source/rdkit.Chem.Subshape.testCombined source/rdkit.Chem.Suppliers source/rdkit.Chem.Suppliers.DbMolSupplier source/rdkit.Chem.Suppliers.MolSupplier source/rdkit.Chem.fmcs source/rdkit.Chem.fmcs.fmcs source/rdkit.Chem.AllChem source/rdkit.Chem.BRICS source/rdkit.Chem.BuildFragmentCatalog source/rdkit.Chem.ChemicalFeatures source/rdkit.Chem.ChemicalForceFields source/rdkit.Chem.Crippen source/rdkit.Chem.DSViewer source/rdkit.Chem.Descriptors source/rdkit.Chem.Descriptors3D source/rdkit.Chem.EnumerateHeterocycles source/rdkit.Chem.EnumerateStereoisomers source/rdkit.Chem.FastSDMolSupplier source/rdkit.Chem.FeatFinderCLI source/rdkit.Chem.FilterCatalog source/rdkit.Chem.FragmentCatalog source/rdkit.Chem.FragmentMatcher source/rdkit.Chem.Fragments source/rdkit.Chem.FunctionalGroups source/rdkit.Chem.GraphDescriptors source/rdkit.Chem.Graphs source/rdkit.Chem.Lipinski source/rdkit.Chem.MACCSkeys source/rdkit.Chem.MCS source/rdkit.Chem.MolCatalog source/rdkit.Chem.MolStandardize source/rdkit.Chem.MolStandardize.rdMolStandardize source/rdkit.Chem.MolSurf source/rdkit.Chem.PandasTools source/rdkit.Chem.PeriodicTable source/rdkit.Chem.PropertyMol source/rdkit.Chem.PyMol source/rdkit.Chem.QED source/rdkit.Chem.Randomize source/rdkit.Chem.Recap source/rdkit.Chem.ReducedGraphs source/rdkit.Chem.SATIS source/rdkit.Chem.SaltRemover source/rdkit.Chem.ShowMols source/rdkit.Chem.TemplateAlign source/rdkit.Chem.TorsionFingerprints source/rdkit.Chem.inchi source/rdkit.Chem.rdchem source/rdkit.Chem.rdDistGeom source/rdkit.Chem.rdqueries source/rdkit.Chem.rdFMCS source/rdkit.Chem.rdMolAlign source/rdkit.Chem.rdMolHash source/rdkit.Chem.rdReducedGraphs source/rdkit.Chem.rdtrajectory source/rdkit.Chem.rdMolTransforms source/rdkit.Chem.rdmolfiles source/rdkit.Chem.rdPartialCharges source/rdkit.Chem.rdMolCatalog source/rdkit.Chem.rdCoordGen source/rdkit.Chem.rdMolChemicalFeatures source/rdkit.Chem.rdMMPA source/rdkit.Chem.rdRGroupDecomposition source/rdkit.Chem.rdForceFieldHelpers source/rdkit.Chem.rdDepictor source/rdkit.Chem.rdChemicalFeatures source/rdkit.Chem.rdmolops source/rdkit.Chem.rdFreeSASA source/rdkit.Chem.rdMolInterchange source/rdkit.Chem.rdShapeHelpers source/rdkit.Chem.rdinchi source/rdkit.Chem.rdChemReactions source/rdkit.Chem.rdSubstructLibrary source/rdkit.Chem.rdfiltercatalog source/rdkit.Chem.rdfragcatalog source/rdkit.Chem.rdStructChecker source/rdkit.Chem.rdMolDescriptors source/rdkit.Chem.rdFingerprintGenerator source/rdkit.Chem.rdSLNParse source/rdkit.DataManip source/rdkit.DataManip.Metric source/rdkit.DataManip.Metric.rdMetricMatrixCalc source/rdkit.DataStructs source/rdkit.DataStructs.BitEnsemble source/rdkit.DataStructs.BitEnsembleDb source/rdkit.DataStructs.BitUtils source/rdkit.DataStructs.HierarchyVis source/rdkit.DataStructs.LazySignature source/rdkit.DataStructs.TopNContainer source/rdkit.DataStructs.VectCollection source/rdkit.DataStructs.cDataStructs source/rdkit.Dbase source/rdkit.Dbase.DbConnection source/rdkit.Dbase.DbInfo source/rdkit.Dbase.DbModule source/rdkit.Dbase.DbReport source/rdkit.Dbase.DbResultSet source/rdkit.Dbase.DbUtils source/rdkit.Dbase.StorageUtils source/rdkit.DistanceGeometry source/rdkit.DistanceGeometry.DistGeom source/rdkit.ForceField source/rdkit.ForceField.rdForceField source/rdkit.Geometry source/rdkit.Geometry.rdGeometry source/rdkit.ML source/rdkit.ML.Cluster source/rdkit.ML.Cluster.Butina source/rdkit.ML.Cluster.ClusterUtils source/rdkit.ML.Cluster.ClusterVis source/rdkit.ML.Cluster.Clusters source/rdkit.ML.Cluster.Murtagh source/rdkit.ML.Cluster.Resemblance source/rdkit.ML.Cluster.Standardize source/rdkit.ML.Cluster.Clustering source/rdkit.ML.Composite source/rdkit.ML.Composite.AdjustComposite source/rdkit.ML.Composite.BayesComposite source/rdkit.ML.Composite.Composite source/rdkit.ML.Data source/rdkit.ML.Data.DataUtils source/rdkit.ML.Data.FindQuantBounds source/rdkit.ML.Data.MLData source/rdkit.ML.Data.Quantize source/rdkit.ML.Data.SplitData source/rdkit.ML.Data.Stats source/rdkit.ML.Data.Transforms source/rdkit.ML.DecTree source/rdkit.ML.DecTree.BuildQuantTree source/rdkit.ML.DecTree.BuildSigTree source/rdkit.ML.DecTree.CrossValidate source/rdkit.ML.DecTree.DecTree source/rdkit.ML.DecTree.Forest source/rdkit.ML.DecTree.ID3 source/rdkit.ML.DecTree.PruneTree source/rdkit.ML.DecTree.QuantTree source/rdkit.ML.DecTree.SigTree source/rdkit.ML.DecTree.Tree source/rdkit.ML.DecTree.TreeUtils source/rdkit.ML.DecTree.TreeVis source/rdkit.ML.DecTree.randomtest source/rdkit.ML.Descriptors source/rdkit.ML.Descriptors.CompoundDescriptors source/rdkit.ML.Descriptors.Descriptors source/rdkit.ML.Descriptors.MoleculeDescriptors source/rdkit.ML.Descriptors.Parser source/rdkit.ML.InfoTheory source/rdkit.ML.InfoTheory.BitClusterer source/rdkit.ML.InfoTheory.BitRank source/rdkit.ML.InfoTheory.entropy source/rdkit.ML.InfoTheory.rdInfoTheory source/rdkit.ML.KNN source/rdkit.ML.KNN.CrossValidate source/rdkit.ML.KNN.DistFunctions source/rdkit.ML.KNN.KNNClassificationModel source/rdkit.ML.KNN.KNNModel source/rdkit.ML.KNN.KNNRegressionModel source/rdkit.ML.MLUtils source/rdkit.ML.MLUtils.VoteImg source/rdkit.ML.ModelPackage source/rdkit.ML.ModelPackage.PackageUtils source/rdkit.ML.ModelPackage.Packager source/rdkit.ML.NaiveBayes source/rdkit.ML.NaiveBayes.ClassificationModel source/rdkit.ML.NaiveBayes.CrossValidate source/rdkit.ML.Neural source/rdkit.ML.Neural.ActFuncs source/rdkit.ML.Neural.CrossValidate source/rdkit.ML.Neural.NetNode source/rdkit.ML.Neural.Network source/rdkit.ML.Neural.Trainers source/rdkit.ML.SLT source/rdkit.ML.SLT.Risk source/rdkit.ML.Scoring source/rdkit.ML.Scoring.Scoring source/rdkit.ML.AnalyzeComposite source/rdkit.ML.BuildComposite source/rdkit.ML.CompositeRun source/rdkit.ML.EnrichPlot source/rdkit.ML.GrowComposite source/rdkit.ML.MatOps source/rdkit.ML.ScreenComposite source/rdkit.ML.files source/rdkit.Numerics source/rdkit.Numerics.rdAlignment source/rdkit.SimDivFilters source/rdkit.SimDivFilters.SimilarityPickers source/rdkit.SimDivFilters.rdSimDivPickers source/rdkit.VLib source/rdkit.VLib.NodeLib source/rdkit.VLib.NodeLib.DbMolSupply source/rdkit.VLib.NodeLib.DbPickleSupplier source/rdkit.VLib.NodeLib.SDSupply source/rdkit.VLib.NodeLib.SmartsMolFilter source/rdkit.VLib.NodeLib.SmartsRemover source/rdkit.VLib.NodeLib.SmilesDupeFilter source/rdkit.VLib.NodeLib.SmilesOutput source/rdkit.VLib.NodeLib.SmilesSupply source/rdkit.VLib.NodeLib.demo source/rdkit.VLib.Filter source/rdkit.VLib.Node source/rdkit.VLib.Output source/rdkit.VLib.Supply source/rdkit.VLib.Transform source/rdkit.utils source/rdkit.utils.cactvs source/rdkit.utils.chemdraw source/rdkit.utils.chemdraw_qax source/rdkit.utils.chemutils source/rdkit.utils.comhack source/rdkit.utils.fileutils source/rdkit.utils.listutils source/rdkit.utils.spiral source/rdkit.rdBase source/rdkit.RDConfig source/rdkit.RDLogger source/rdkit.RDPaths source/rdkit.RDRandom source/rdkit.TestRunner source/rdkit.six 
resolving references...
done
writing... /<<PKGBUILDDIR>>/Docs/Book/Install.md: WARNING: Pygments lexer name 'shellsession' is not known
/<<PKGBUILDDIR>>/Docs/Book/Install.md: WARNING: Pygments lexer name 'shellsession' is not known
/<<PKGBUILDDIR>>/Docs/Book/Install.md: WARNING: Pygments lexer name 'shellsession' is not known
/<<PKGBUILDDIR>>/Docs/Book/Install.md: WARNING: Pygments lexer name 'shellsession' is not known
/<<PKGBUILDDIR>>/Docs/Book/Install.md: WARNING: Pygments lexer name 'shellsession' is not known
/<<PKGBUILDDIR>>/Docs/Book/Install.md: WARNING: Pygments lexer name 'shellsession' is not known
done
copying images... [  2%] images/picture_1.png
copying images... [  5%] images/picture_0.png
copying images... [  7%] images/picture_3.png
copying images... [ 10%] images/picture_2.png
copying images... [ 12%] images/picture_4.png
copying images... [ 15%] images/cdk2_mol1.png
copying images... [ 17%] images/cdk2_mol2.png
copying images... [ 20%] images/cdk2_molgrid.png
copying images... [ 22%] images/cdk2_molgrid_aligned.png
copying images... [ 25%] images/mfp2_bit872.svg
copying images... [ 27%] images/rdk_bit1553.svg
copying images... [ 30%] images/rdk_bit1553_2.svg
copying images... [ 32%] images/similarity_map_fp1.png
copying images... [ 35%] images/similarity_map_fp2.png
copying images... [ 37%] images/similarity_map_fp3.png
copying images... [ 40%] images/similarity_map_charges.png
copying images... [ 42%] images/similarity_map_crippen.png
copying images... [ 45%] images/picture_6.png
copying images... [ 47%] images/picture_5.png
copying images... [ 50%] images/picture_9.png
copying images... [ 52%] images/picture_8.png
copying images... [ 55%] images/picture_7.png
copying images... [ 57%] images/picture_10.png
copying images... [ 60%] images/picture_12.png
copying images... [ 62%] images/picture_11.png
copying images... [ 65%] images/picture_10.jpg
copying images... [ 67%] ../Code/images/enhanced_stereo_and1_and2_base.png
copying images... [ 70%] ../Code/images/enhanced_stereo_and1_and2_expand.png
copying images... [ 72%] ../Code/images/enhanced_stereo_and1_cis_base.png
copying images... [ 75%] ../Code/images/enhanced_stereo_and1_cis_expand.png
copying images... [ 77%] ../Code/images/enhanced_stereo_and1_trans_base.png
copying images... [ 80%] ../Code/images/enhanced_stereo_and1_trans_expand.png
copying images... [ 82%] ../Code/images/enhanced_stereo_or1_or2_base.png
copying images... [ 85%] ../Code/images/enhanced_stereo_or1_cis_base.png
copying images... [ 87%] ../Code/images/enhanced_stereo_or1_trans_base.png
copying images... [ 90%] ../Code/images/enhanced_stereo_abs_and_base.png
copying images... [ 92%] ../Code/images/enhanced_stereo_abs_and_expand.png
copying images... [ 95%] ../Code/images/enhanced_stereo_abs_or_base.png
copying images... [ 97%] images/indole1.png
copying images... [100%] images/similarity_map_rf.png

copying TeX support files... copying TeX support files...
done
build succeeded, 315 warnings.

The LaTeX files are in _build/latex.
Run 'make' in that directory to run these through (pdf)latex
(use `make latexpdf' here to do that automatically).
Running LaTeX files through pdflatex...
make -C _build/latex all-pdf
make[3]: Entering directory '/<<PKGBUILDDIR>>/Docs/Book/_build/latex'
latexmk -pdf -dvi- -ps-  'RDKit.tex'
Rc files read:
  /etc/LatexMk
  latexmkrc
Latexmk: This is Latexmk, John Collins, 17 Apr. 2020, version: 4.69a.
Rule 'pdflatex': The following rules & subrules became out-of-date:
      'pdflatex'
------------
Run number 1 of rule 'pdflatex'
------------
------------
Running 'pdflatex   -recorder  "RDKit.tex"'
------------
Latexmk: applying rule 'pdflatex'...
This is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Debian) (preloaded format=pdflatex)
 restricted \write18 enabled.
entering extended mode
(./RDKit.tex
LaTeX2e <2020-02-02> patch level 5
L3 programming layer <2020-04-06> (./sphinxmanual.cls
Document Class: sphinxmanual 2019/12/01 v2.3.0 Document class (Sphinx manual)
(/usr/share/texlive/texmf-dist/tex/latex/base/report.cls
Document Class: report 2019/12/20 v1.4l Standard LaTeX document class
(/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)))
(/usr/share/texlive/texmf-dist/tex/latex/base/inputenc.sty)
(/usr/share/texlive/texmf-dist/tex/latex/cmap/cmap.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty<<t1.cmap>>)
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty
For additional information on amsmath, use the `?' option.
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty))
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty)
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty))
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty))
(/usr/share/texlive/texmf-dist/tex/generic/babel/babel.sty
(/usr/share/texlive/texmf-dist/tex/generic/babel/switch.def)
(/usr/share/texlive/texmf-dist/tex/generic/babel-english/english.ldf
(/usr/share/texlive/texmf-dist/tex/generic/babel/babel.def
(/usr/share/texlive/texmf-dist/tex/generic/babel/txtbabel.def))))
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty)
(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty) (./sphinx.sty
(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def)))
(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty)
(/usr/share/texlive/texmf-dist/tex/latex/titlesec/titlesec.sty)
(/usr/share/texlive/texmf-dist/tex/latex/tabulary/tabulary.sty
(/usr/share/texlive/texmf-dist/tex/latex/tools/array.sty))
(/usr/share/texlive/texmf-dist/tex/latex/tools/longtable.sty)
(/usr/share/texlive/texmf-dist/tex/latex/varwidth/varwidth.sty)
(./sphinxmulticell.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty)
(/usr/share/texlive/texmf-dist/tex/latex/framed/framed.sty)
(/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg))
(/usr/share/texlive/texmf-dist/tex/latex/fancyvrb/fancyvrb.sty)
(./footnotehyper-sphinx.sty)
(/usr/share/texlive/texmf-dist/tex/latex/float/float.sty)
(/usr/share/texlive/texmf-dist/tex/latex/wrapfig/wrapfig.sty)
(/usr/share/texlive/texmf-dist/tex/latex/parskip/parskip.sty
(/usr/share/texlive/texmf-dist/tex/latex/parskip/parskip-2001-04-09.sty))
(/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty)
(/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty)
(/usr/share/texlive/texmf-dist/tex/latex/capt-of/capt-of.sty)
(/usr/share/texlive/texmf-dist/tex/latex/needspace/needspace.sty)
(./sphinxhighlight.sty)
(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty
(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty)))
(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty
(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty
(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty)))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty
(/usr/share/texlive/texmf-dist/tex/latex/pdftexcmds/pdftexcmds.sty
(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty))
(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty)
(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty)
(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty)
(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def)
(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty)
(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def)
(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)
(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty
(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty))
(/usr/share/texlive/texmf-dist/tex/generic/atbegshi/atbegshi.sty))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def
(/usr/share/texlive/texmf-dist/tex/latex/atveryend/atveryend.sty)
(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty
(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty)))
(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty)
(./sphinxmessages.sty)
Writing index file RDKit.idx
(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdfmode.def)
(./RDKit.aux) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1ptm.fd)
(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii
[Loading MPS to PDF converter (version 2006.09.02).]
) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty
(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg))
*geometry* driver: auto-detecting
*geometry* detected driver: pdftex
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty
(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty)
(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty))
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1phv.fd)<<ot1.cmap>><<oml.cmap
>><<oms.cmap>><<omx.cmap>>
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd)
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [1{/var/lib/texmf/fo
nts/map/pdftex/updmap/pdftex.map}] [2] [1] [2]
Chapter 1.
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd)
Underfull \hbox (badness 10000) in paragraph at lines 122--123
[]\T1/ptm/m/n/10 Cheminformatics nodes for KN-IME (dis-tributed from the KN-IME
 com-mu-nity site:
[1]

LaTeX Warning: Hyper reference `Overview:footnote1' on page 2 undefined on inpu
t line 216.

[2] [3] [4]
Chapter 2.
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1pcr.fd) [5] [6]
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd) [7] [8] [9] [10]
Underfull \hbox (badness 10000) in paragraph at lines 742--743
[]\T1/ptm/m/n/10 You can en-able sup-port for the Avalon toolkit by adding the 
ar-gu-ment
[11]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 811.

(/usr/share/texlive/texmf-dist/tex/latex/base/t1cmtt.fd)
(/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmtt.fd)
Underfull \hbox (badness 10000) in paragraph at lines 840--841
[]\T1/ptm/m/n/10 Add \T1/pcr/m/n/10 #define BOOST_PYTHON_NO_PY_SIGNATURES \T1/p
tm/m/n/10 at the top of \T1/pcr/m/n/10 Code/GraphMol/Wrap/
[12] [13] [14]
Underfull \hbox (badness 10000) in paragraph at lines 1023--1024
[]\T1/ptm/m/n/10 Run cmake. Here's an ex-am-ple ba-sic com-mand line for 64bit 
win-dows that will

Underfull \hbox (badness 10000) in paragraph at lines 1023--1024
\T1/ptm/m/n/10 down-load the InChI and Avalon toolkit sources from the InChI Tr
ust and Source-Forge

Underfull \hbox (badness 10000) in paragraph at lines 1023--1024
\T1/ptm/m/n/10 repos-i-to-ries, re-spec-tively, and build the Post-greSQL car-t
ridge for the in-stalled ver-sion

Underfull \hbox (badness 10000) in paragraph at lines 1023--1024
\T1/ptm/m/n/10 of Post-greSQL:\T1/pcr/m/n/10 cmake -DRDK_BUILD_PYTHON_WRAPPERS=
ON -DBOOST_ROOT=C:/

Underfull \hbox (badness 10000) in paragraph at lines 1023--1024
\T1/pcr/m/n/10 boost -DRDK_BUILD_INCHI_SUPPORT=ON -DRDK_BUILD_AVALON_SUPPORT=ON


Underfull \hbox (badness 10000) in paragraph at lines 1023--1024
\T1/pcr/m/n/10 -DRDK_BUILD_PGSQL=ON -DPostgreSQL_ROOT="C:\Program Files\Postgre
SQL\9.5"

Underfull \hbox (badness 10000) in paragraph at lines 1032--1033
[]\T1/pcr/m/n/10 "C:\Program Files\PostgreSQL\9.5\bin\pg_ctl.exe" -N "postgresq
l-9.5"

Underfull \hbox (badness 10000) in paragraph at lines 1038--1039
[]\T1/pcr/m/n/10 "C:\Program Files\PostgreSQL\9.5\bin\pg_ctl.exe" -N "postgresq
l-9.5"
[15] [16]
Chapter 3.
[17]
Underfull \hbox (badness 10000) in paragraph at lines 1135--1136
[]\T1/ptm/m/n/10 displays a mes-sage like: \T1/pcr/m/n/10 [12:18:01] Explicit v
alence for atom # 1 O greater than
[18] [19]

LaTeX Warning: Hyper reference `GettingStartedInPython:chem-vs-allchem' on page
 20 undefined on input line 1314.

[20] [21] [22] [23]

LaTeX Warning: Hyper reference `GettingStartedInPython:the-sssr-problem' on pag
e 24 undefined on input line 1529.

[24] [25]
Underfull \hbox (badness 10000) in paragraph at lines 1662--1664
[]\T1/ptm/m/n/10 Another op-tion for Com-pute2DCoords al-lows you to gen-er-ate
 2D de-pic-tions for molecules that

Underfull \hbox (badness 7649) in paragraph at lines 1662--1664
\T1/ptm/m/n/10 closely mimic 3D con-for-ma-tions. This is avail-able us-ing the
 func-tion \T1/pcr/m/n/10 rdkit.Chem.AllChem.

Underfull \hbox (badness 10000) in paragraph at lines 1682--1687
[]\T1/ptm/m/n/10 More fine-grained con-trol can be ob-tained us-ing the core fu
nc-tion \T1/pcr/m/n/10 rdkit.Chem.rdDepictor.
[26 <./picture_1.png (PNG copy)> <./picture_0.png (PNG copy)> <./picture_3.png 
(PNG copy)> <./picture_2.png> <./picture_4.png>] [27] [28] [29 <./cdk2_mol1.png
> <./cdk2_mol2.png>] [30 <./cdk2_molgrid.png>] [31 <./cdk2_molgrid_aligned.png 
(PNG copy)>] [32]

LaTeX Warning: Hyper reference `GettingStartedInPython:chemical-reactions' on p
age 33 undefined on input line 2074.

[33]

LaTeX Warning: Hyper reference `GettingStartedInPython:chemical-reactions' on p
age 34 undefined on input line 2119.

[34] [35] [36] [37] [38] [39]

LaTeX Warning: Hyper reference `GettingStartedInPython:feature-definitions-used
-in-the-morgan-fingerprints' on page 40 undefined on input line 2550.

[40] [41] [42 <./mfp2_bit872.png> <./rdk_bit1553.png>] [43 <./rdk_bit1553_2.png
>] [44] [45 <./similarity_map_fp1.png>] [46 <./similarity_map_fp2.png>]

LaTeX Warning: Hyper reference `GettingStartedInPython:list-of-available-descri
ptors' on page 47 undefined on input line 2899.

[47 <./similarity_map_fp3.png>] [48] [49 <./similarity_map_charges.png>]

LaTeX Warning: Hyper reference `RDKit_Book::doc' on page 50 undefined on input 
line 2962.

[50 <./similarity_map_crippen.png>] [51] [52] [53] [54] [55] [56]

LaTeX Warning: Hyper reference `RDKit_Book::doc' on page 57 undefined on input 
line 3387.

[57] [58] [59]
Underfull \hbox (badness 6792) in paragraph at lines 3630--3633
[]\T1/ptm/m/n/10 Or we can use the bit rank-ing func-tion-al-ity from the \T1/p
cr/m/n/10 rdkit.ML.InfoTheory.rdInfoTheory.
[60] [61] [62] [63 <./picture_6.png>] [64]
Underfull \hbox (badness 10000) in paragraph at lines 4010--4014
[]|\T1/ptm/m/n/10 Wildman and Crip-pen \T1/ptm/m/it/10 JCICS

Underfull \hbox (badness 10000) in paragraph at lines 4020--4024
[]|\T1/ptm/m/n/10 Wildman and Crip-pen \T1/ptm/m/it/10 JCICS

Overfull \hbox (26.64615pt too wide) in paragraph at lines 4088--4089
[]|\T1/ptm/m/n/10 Num{Aromatic,Saturated,Aliphatic}Rings| 

Overfull \hbox (91.89552pt too wide) in paragraph at lines 4093--4094
[]|\T1/ptm/m/n/10 Num{Aromatic,Saturated,Aliphatic}{Hetero,Carbo}cycles| 

Underfull \hbox (badness 10000) in paragraph at lines 4122--4125
[]|\T1/ptm/m/n/10 Number of bridge-head atoms

Underfull \hbox (badness 10000) in paragraph at lines 4150--4153
\T1/ptm/m/n/10 tions [][]$http : / / www . chemcomp . com /

Underfull \hbox (badness 10000) in paragraph at lines 4159--4163
\T1/ptm/m/n/10 tri-bu-tions [][]$http : / / www . chemcomp .

Underfull \hbox (badness 10000) in paragraph at lines 4169--4173
\T1/ptm/m/n/10 tri-bu-tions [][]$http : / / www . chemcomp .

Underfull \hbox (badness 10000) in paragraph at lines 4205--4208
[]|\T1/ptm/m/n/10 implemented us-ing a set of

Underfull \hbox (badness 10000) in paragraph at lines 4205--4208
\T1/ptm/m/n/10 SMARTS def-i-ni-tions in $(RD-

Overfull \hbox (9.18636pt too wide) in paragraph at lines 4205--4208
\T1/ptm/m/n/10 BASE)/Data/FragmentDescriptors.csv| 

Underfull \hbox (badness 7273) in paragraph at lines 4214--4217
\T1/ptm/m/n/10 and Con-soni ^^PDe-scrip-tors from

Underfull \hbox (badness 10000) in paragraph at lines 4214--4217
\T1/ptm/m/n/10 Chemoin-for-mat-ics [][]$https : / / doi . org /
[65]

Package longtable Warning: Column widths have changed
(longtable)                in table 1 on input line 4221.

[66]
Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 De-scrip-

Overfull \hbox (19.3687pt too wide) in paragraph at lines 4364--4364
\T1/ptm/m/n/10 tor/Descriptor

Overfull \hbox (3.88354pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 Lan-

Overfull \hbox (8.88354pt too wide) in paragraph at lines 4364--4364
\T1/ptm/m/n/10 guage| 

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
\T1/ptm/m/n/10 best fit

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 PMI1,

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
\T1/ptm/m/n/10 PMI2,

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 NPR1,

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 Ra-

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
\T1/ptm/m/n/10 dius of

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 In-er-tial

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
\T1/ptm/m/n/10 shape

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 Ec-cen-

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 As-

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 Sphe-

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
\T1/ptm/m/n/10 roc-ity

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 Au-to-

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 GET-

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 
[67]
Underfull \hbox (badness 10000) in paragraph at lines 4444--4444
[]\T1/ptm/m/n/10 Fin-ger-print

Underfull \hbox (badness 10000) in paragraph at lines 4444--4444
[]\T1/ptm/m/n/10 Lan-

Overfull \hbox (2.77637pt too wide) in paragraph at lines 4444--4444
\T1/ptm/m/n/10 guage| 

Underfull \hbox (badness 10000) in paragraph at lines 4444--4444
[]\T1/ptm/m/n/10 Topo-log-i-cal

Underfull \hbox (badness 10000) in paragraph at lines 4444--4444
[]\T1/ptm/m/n/10 Mor-

Underfull \hbox (badness 10000) in paragraph at lines 4444--4444
[]\T1/ptm/m/n/10 2D Phar-ma-

Overfull \hbox (0.97221pt too wide) in paragraph at lines 4494--4494
[]\T1/ptm/m/n/10 Fea-

Overfull \hbox (8.75237pt too wide) in paragraph at lines 4494--4494
[]\T1/ptm/m/n/10 Donor| 

Underfull \hbox (badness 10000) in paragraph at lines 4494--4494
[]\T1/ptm/m/n/10 Ac-

Underfull \hbox (badness 10000) in paragraph at lines 4494--4494
[]\T1/pcr/m/n/10 [$([O,S;H1;v2;!$(*-*=[O,N,P,S])]),$([O,S;H0;v2]),$([O,S;-]),$(
[N;v3;!

Overfull \hbox (2.08232pt too wide) in paragraph at lines 4494--4494
[]\T1/ptm/m/n/10 Aro-

Overfull \hbox (5.422pt too wide) in paragraph at lines 4494--4494
\T1/ptm/m/n/10 matic| 

Overfull \hbox (5.9722pt too wide) in paragraph at lines 4494--4494
[]\T1/ptm/m/n/10 Halo-

Underfull \hbox (badness 10000) in paragraph at lines 4494--4494
[]\T1/ptm/m/n/10 Ba-

Underfull \hbox (badness 10000) in paragraph at lines 4494--4494
[]\T1/pcr/m/n/10 [#7;+,$([N;H2&+0][$([C,a]);!$([C,a](=O))]),$([N;H1&+0]([$([C,a
]);!

Underfull \hbox (badness 10000) in paragraph at lines 4494--4494
\T1/pcr/m/n/10 $([C,a](=O))])[$([C,a]);!$([C,a](=O))]),$([N;H0&+0]([C;!$(C(=O))
])([C;!

Overfull \hbox (9.86208pt too wide) in paragraph at lines 4494--4494
[]\T1/ptm/m/n/10 Acidic| 
[68 <./picture_5.png (PNG copy)>] [69] [70]
Chapter 4.
[71 <./picture_9.png (PNG copy)>] [72 <./picture_8.png> <./picture_7.png (PNG c
opy)>] [73 <./picture_10.png> <./picture_12.png>] [74 <./picture_11.png>]
[75] [76] [77] [78] [79] [80] [81] [82] [83] [84]

LaTeX Warning: Hyper reference `RDKit_Book:ph4-figure' on page 85 undefined on 
input line 5713.

[85] [86 <./picture_10.jpg>] [87] [88]
Underfull \hbox (badness 10000) in paragraph at lines 6147--6147
[]\T1/ptm/m/n/10 _Chi-ral-i-ty-Pos-si-

Underfull \hbox (badness 10000) in paragraph at lines 6147--6147
[]\T1/ptm/m/n/10 _Re-ac-tion-De-

Underfull \hbox (badness 10000) in paragraph at lines 6147--6147
[]\T1/ptm/m/n/10 mo-lAtomMap-

Underfull \hbox (badness 10000) in paragraph at lines 6147--6147
[]\T1/ptm/m/n/10 molFileIn-ver-

Underfull \hbox (badness 10000) in paragraph at lines 6147--6147
[]\T1/ptm/m/n/10 mol-Rxn-Com-po-
[89] [90]
Underfull \hbox (badness 10000) in paragraph at lines 6286--6290
[]\T1/ptm/m/n/10 By de-fault the \T1/pcr/m/n/10 rdkit.Chem.rdmolfiles.SDMolSupp
lier \T1/ptm/m/n/10 and \T1/pcr/m/n/10 rdkit.Chem.rdmolfiles.

Underfull \hbox (badness 6559) in paragraph at lines 6286--6290
\T1/pcr/m/n/10 ForwardSDMolSupplier \T1/ptm/m/n/10 classes (\T1/pcr/m/n/10 RDKi
t::SDMolSupplier \T1/ptm/m/n/10 and \T1/pcr/m/n/10 RDKit::ForwardMolSupplier
[91]
Underfull \hbox (badness 10000) in paragraph at lines 6335--6338
[]\T1/ptm/m/n/10 If you have atom prop-er-ties that you would like to have writ
-ten to SDF files, you can

Underfull \hbox (badness 10000) in paragraph at lines 6335--6338
\T1/ptm/m/n/10 use the func-tions \T1/pcr/m/n/10 rdkit.Chem.rdmolfiles.CreateAt
omStringPropertyList()\T1/ptm/m/n/10 ,

Underfull \hbox (badness 10000) in paragraph at lines 6335--6338
\T1/pcr/m/n/10 rdkit.Chem.rdmolfiles.CreateAtomIntPropertyList()\T1/ptm/m/n/10 
, \T1/pcr/m/n/10 rdkit.Chem.

Underfull \hbox (badness 10000) in paragraph at lines 6335--6338
\T1/pcr/m/n/10 rdmolfiles.CreateAtomDoublePropertyList()\T1/ptm/m/n/10 , or \T1
/pcr/m/n/10 rdkit.Chem.rdmolfiles.
[92]
Underfull \hbox (badness 10000) in paragraph at lines 6446--6446
[]\T1/phv/m/n/10 Mix-

Underfull \hbox (badness 10000) in paragraph at lines 6446--6446
[]\T1/ptm/m/n/10 mix-

Underfull \hbox (badness 10000) in paragraph at lines 6446--6446
[]\T1/ptm/m/n/10 mix-

Underfull \hbox (badness 10000) in paragraph at lines 6446--6446
[]\T1/ptm/m/n/10 mix-

Underfull \hbox (badness 10000) in paragraph at lines 6446--6446
[]\T1/ptm/m/n/10 mix-
[93] [94 <./enhanced_stereo_and1_and2_base.png> <./enhanced_stereo_and1_and2_ex
pand.png> <./enhanced_stereo_and1_cis_base.png> <./enhanced_stereo_and1_cis_exp
and.png> <./enhanced_stereo_and1_trans_base.png> <./enhanced_stereo_and1_trans_
expand.png> <./enhanced_stereo_or1_or2_base.png> <./enhanced_stereo_or1_cis_bas
e.png> <./enhanced_stereo_or1_trans_base.png> <./enhanced_stereo_abs_and_base.p
ng> <./enhanced_stereo_abs_and_expand.png> <./enhanced_stereo_abs_or_base.png>]

Underfull \hbox (badness 7558) in paragraph at lines 6461--6463
[]\T1/ptm/m/n/10 It is pos-si-ble to enu-mer-ate the el-e-ments of a \T1/pcr/m/
n/10 StereoGroup \T1/ptm/m/n/10 us-ing the func-tion \T1/pcr/m/n/10 rdkit.Chem.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 6475--6476
[]\T1/ptm/m/n/10 Reactions also pre-serve \T1/pcr/m/n/10 StereoGroup\TS1/cmtt/m
/n/10 ``\T1/pcr/m/n/10 s. Product atoms are included in the
[95] [96] [97] [98]
Chapter 5.
[99] [100 <./indole1.png>] [101] [102] [103] [104] [105] [106] [107] [108]
Underfull \hbox (badness 10000) in paragraph at lines 7184--7185
[]\T1/ptm/m/n/10 IPython note-book: [][]$http : / / nbviewer . ipython . org / 
gist / greglandrum / 8351725$[][] [][]$https : / / gist . github . com / gregla
ndrum /
[109 <./similarity_map_rf.png>] [110] [111] [112] [113] [114]
Chapter 6.
[115] [116] [117] [118]
Overfull \hbox (1096.24321pt too wide) in paragraph at lines 7685--7685
[]\T1/pcr/m/n/9 CC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)[C[]@[][]\T1/pcr/b/n/
9 @H[]\T1/pcr/m/n/9 ][]1[]NC([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][
]2[]CCCN2C([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCCN2C([]=[]O)
[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ]([C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 
](C)CC)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CO)NC([]=[]O)[C[]\T1/pcr
/b/n/9 @H[]\T1/pcr/m/n/9 ](C)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ]([C
[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)O)NC([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T
1/pcr/m/n/9 ][]2[]CSSC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](NC1[]=[]O)C([]=[]O)
N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc1cnc[nH][]1[])C([]=[]O)N[C[]\T1/p
cr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc1ccccc1)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1
/pcr/m/n/9 ](CCCNC([]=[]N)N)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 
](Cc1c[nH]c3ccccc13)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CCCNC(
[]=[]N)N)C([]=[]O)N2|  

Overfull \hbox (167.44426pt too wide) in paragraph at lines 7687--7687
[]\T1/pcr/m/n/9 CN1C([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CCCNC([]=[]N)
N)NC([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2ccc(O)cc2)NC([]=[]O)[
C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCCN2C([]=[]O)[C[]\T1/pcr/b/n/9 @
H[]\T1/pcr/m/n/9 ](Cc2ccc3ccccc3c2)NC([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr
/m/n/9 ][]1[]CC([]=[]O)O|  

Overfull \hbox (113.44432pt too wide) in paragraph at lines 7688--7688
[]\T1/pcr/m/n/9 NCCCC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](NC([]=[]O)[C[]\T1/pc
r/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc1ccc(OP([]=[]O)(O)O)cc1)NC([]=[]O)Cc1ccccc1)C([]=
[]O)N1CCC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]1[]C([]=[]O)N[C[]@[][]\T1/pcr/b
/n/9 @H[]\T1/pcr/m/n/9 ](Cc1ccccc1)C(N)[]=[]O|  

Overfull \hbox (675.04369pt too wide) in paragraph at lines 7689--7689
[]\T1/pcr/m/n/9 CCCCCCCCCCCCCCCCNC([]=[]O)CN(CC([]=[]O)NC(C)(C)C([]=[]O)N[C[]@[
][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc1ccccc1)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9
 @H[]\T1/pcr/m/n/9 ](CC(C)C)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 
](Cc1ccccc1)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CCCNC([]=[]N)N
)C([]=[]O)N1CCC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]1[]C([]=[]O)N[C[]@[][]\T1
/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CCCNC([]=[]N)N)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 
@H[]\T1/pcr/m/n/9 ](CC(N)[]=[]O)C(N)[]=[]O)C([]=[]O)c1cccnc1|  

Overfull \hbox (491.4439pt too wide) in paragraph at lines 7690--7690
[]\T1/pcr/m/n/9 CCCCCCCCCCCCCCCCN(CCCCCCCCCCCCCCCC)CCCCCC([]=[]O)NC(C)(C)C([]=[
]O)NC(Cc1ccccc1)C([]=[]O)NC(CC(C)C)C([]=[]O)NC(Cc1ccccc1)C([]=[]O)NC(CCCNC([]=[
]N)N)C([]=[]O)N1CCCC1C([]=[]O)NC(CCCNC([]=[]N)N)C([]=[]O)NC(CC(N)[]=[]O)C(N)[]=
[]O|  

Overfull \hbox (383.44402pt too wide) in paragraph at lines 7691--7691
[]\T1/pcr/m/n/9 CC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)[C[]@[][]\T1/pcr/b/n/
9 @H[]\T1/pcr/m/n/9 ][]1[]NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2cc
ccc2)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)NC([]=[]O)[C[]@[][]
\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCCN2C([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/p
cr/m/n/9 ](Cc2ccccc2)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C(C)C)NC([
]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)NC([]=[]O)[C[]\T1/pcr/b/n/9 
@H[]\T1/pcr/m/n/9 ](CCSC)NC1[]=[]O|  

Overfull \hbox (394.244pt too wide) in paragraph at lines 7692--7692
[]\T1/pcr/m/n/9 CC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)[C[]@[][]\T1/pcr/b/n/
9 @H[]\T1/pcr/m/n/9 ][]1[]NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2cc
ccc2)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)NC([]=[]O)[C[]@[][]
\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCCN2C([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/p
cr/m/n/9 ](Cc2ccccc2)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C(C)C)NC([
]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)NC([]=[]O)[C[]\T1/pcr/b/n/9 
@H[]\T1/pcr/m/n/9 ](CC[S[]+[]](C)[O[]- 

Overfull \hbox (448.24394pt too wide) in paragraph at lines 7693--7693
[]\T1/pcr/m/n/9 CC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)[C[]@[][]\T1/pcr/b/n/
9 @H[]\T1/pcr/m/n/9 ][]1[]NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2c[
nH]c3ccccc23)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2ccccc2)NC([]=[]
O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2ccccc2)NC([]=[]O)[C[]@[][]\T1/pcr/b/
n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCCN2C([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ]
(CCSC)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)NC([]=[]O)[C[]\T1/
pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC[S[]+[]](C)[O[]- 

Overfull \hbox (270.04414pt too wide) in paragraph at lines 7694--7694
[][]\T1/pcr/m/n/9 ])NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C(C)C)NC([]
=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2c[nH]c3ccccc23)NC([]=[]O)[C[]\T1/
pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2ccccc2)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr
/m/n/9 ](Cc2ccccc2)NC([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCC
N2C([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC[S[]+[]](C)[O[]- 
[119]
Overfull \hbox (1096.24321pt too wide) in paragraph at lines 7707--7707
[]\T1/pcr/m/n/9 CC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)[C[]@[][]\T1/pcr/b/n/
9 @H[]\T1/pcr/m/n/9 ][]1[]NC([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][
]2[]CCCN2C([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCCN2C([]=[]O)
[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ]([C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 
](C)CC)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CO)NC([]=[]O)[C[]\T1/pcr
/b/n/9 @H[]\T1/pcr/m/n/9 ](C)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ]([C
[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)O)NC([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T
1/pcr/m/n/9 ][]2[]CSSC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](NC1[]=[]O)C([]=[]O)
N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc1cnc[nH][]1[])C([]=[]O)N[C[]\T1/p
cr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc1ccccc1)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1
/pcr/m/n/9 ](CCCNC([]=[]N)N)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 
](Cc1c[nH]c3ccccc13)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CCCNC(
[]=[]N)N)C([]=[]O)N2|  

Overfull \hbox (167.44426pt too wide) in paragraph at lines 7709--7709
[]\T1/pcr/m/n/9 CN1C([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CCCNC([]=[]N)
N)NC([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2ccc(O)cc2)NC([]=[]O)[
C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCCN2C([]=[]O)[C[]\T1/pcr/b/n/9 @
H[]\T1/pcr/m/n/9 ](Cc2ccc3ccccc3c2)NC([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr
/m/n/9 ][]1[]CC([]=[]O)O|  

Overfull \hbox (113.44432pt too wide) in paragraph at lines 7710--7710
[]\T1/pcr/m/n/9 NCCCC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](NC([]=[]O)[C[]\T1/pc
r/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc1ccc(OP([]=[]O)(O)O)cc1)NC([]=[]O)Cc1ccccc1)C([]=
[]O)N1CCC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]1[]C([]=[]O)N[C[]@[][]\T1/pcr/b
/n/9 @H[]\T1/pcr/m/n/9 ](Cc1ccccc1)C(N)[]=[]O|  

Overfull \hbox (675.04369pt too wide) in paragraph at lines 7711--7711
[]\T1/pcr/m/n/9 CCCCCCCCCCCCCCCCNC([]=[]O)CN(CC([]=[]O)NC(C)(C)C([]=[]O)N[C[]@[
][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc1ccccc1)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9
 @H[]\T1/pcr/m/n/9 ](CC(C)C)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 
](Cc1ccccc1)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CCCNC([]=[]N)N
)C([]=[]O)N1CCC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]1[]C([]=[]O)N[C[]@[][]\T1
/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CCCNC([]=[]N)N)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 
@H[]\T1/pcr/m/n/9 ](CC(N)[]=[]O)C(N)[]=[]O)C([]=[]O)c1cccnc1|  

Overfull \hbox (383.44402pt too wide) in paragraph at lines 7712--7712
[]\T1/pcr/m/n/9 CC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)[C[]@[][]\T1/pcr/b/n/
9 @H[]\T1/pcr/m/n/9 ][]1[]NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2cc
ccc2)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)NC([]=[]O)[C[]@[][]
\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCCN2C([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/p
cr/m/n/9 ](Cc2ccccc2)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C(C)C)NC([
]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)NC([]=[]O)[C[]\T1/pcr/b/n/9 
@H[]\T1/pcr/m/n/9 ](CCSC)NC1[]=[]O|  

Overfull \hbox (394.244pt too wide) in paragraph at lines 7713--7713
[]\T1/pcr/m/n/9 CC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)[C[]@[][]\T1/pcr/b/n/
9 @H[]\T1/pcr/m/n/9 ][]1[]NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2cc
ccc2)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)NC([]=[]O)[C[]@[][]
\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCCN2C([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/p
cr/m/n/9 ](Cc2ccccc2)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C(C)C)NC([
]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)NC([]=[]O)[C[]\T1/pcr/b/n/9 
@H[]\T1/pcr/m/n/9 ](CC[S[]+[]](C)[O[]- 

Overfull \hbox (448.24394pt too wide) in paragraph at lines 7714--7714
[]\T1/pcr/m/n/9 CC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)[C[]@[][]\T1/pcr/b/n/
9 @H[]\T1/pcr/m/n/9 ][]1[]NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2c[
nH]c3ccccc23)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2ccccc2)NC([]=[]
O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2ccccc2)NC([]=[]O)[C[]@[][]\T1/pcr/b/
n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCCN2C([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ]
(CCSC)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)NC([]=[]O)[C[]\T1/
pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC[S[]+[]](C)[O[]- 

Overfull \hbox (270.04414pt too wide) in paragraph at lines 7715--7715
[][]\T1/pcr/m/n/9 ])NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C(C)C)NC([]
=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2c[nH]c3ccccc23)NC([]=[]O)[C[]\T1/
pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2ccccc2)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr
/m/n/9 ](Cc2ccccc2)NC([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCC
N2C([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC[S[]+[]](C)[O[]- 

Overfull \hbox (550.84383pt too wide) in paragraph at lines 7716--7716
[]\T1/pcr/m/n/9 CC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)[C[]\T1/pcr/b/n/9 @H[
]\T1/pcr/m/n/9 ](N)C([]=[]O)N[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C([]=[]O)N[C
[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)C([]=[]O)N[C[]\T1/pcr/b/n/9 @H[
]\T1/pcr/m/n/9 ](C([]=[]O)N1CCC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]1[]C([]=[
]O)N1CCC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]1[]C([]=[]O)N[C[]\T1/pcr/b/n/9 @
H[]\T1/pcr/m/n/9 ](CCC([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CCC([
]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)C([]=[]O)O)Cc1ccccc1)C
c1ccccc1)C(C)C)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)CC|  
[120] [121] [122]
Overfull \vbox (1.18257pt too high) detected at line 7924
[123] [124] [125] [126] [127] [128] [129] [130] [131] [132]
Chapter 7.
[133] [134] [135] [136]
Chapter 8.
[137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148]
[149] [150] [151] [152] [153] [154]
Chapter 9.
[155] [156]
Chapter 10.
No file RDKit.ind.

Package longtable Warning: Table widths have changed. Rerun LaTeX.

[157] (./RDKit.aux)
kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 tctt1000
mkdir: cannot create directory '././sbuild-nonexistent': Permission denied
mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input tctt1000
This is METAFONT, Version 2.7182818 (TeX Live 2020/Debian) (preloaded base=mf)

(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/tctt1000.mf
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf)
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/tctt.mf
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txsymb.mf
 Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf
 Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txpseudo.mf
 Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txaccent.mf
 Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [27] [29])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txgen.mf
 Ok [100] [109] [98] [99] [108])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txsymbol.mf
 Ok [13] [18] [21] [22] [23] [24] [25] [26] [28] [31] [32] [36] [39] [44]
[45] [46] [42] [47] [60] [61] [62] [77] [79] [87] [110] [91] [93] [94] [95]
[96] [126] [127] [128] [129] [130] [131] [132] [133] [134] [135] [136] [137]
[138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149]
[150] [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] [161]
[162] [163] [164] [165] [166] [167] [168] [169] [171] [172] [173] [174]
[175] [177] [176] [180] [181] [182] [183] [184] [187] [191] [214] [246])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txromod.mf
 Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txrsuper.mf
 Ok [185] [178] [179] [170] [186])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txrfract.mf
 Ok [188] [189] [190]) ) ) )
Font metrics written on tctt1000.tfm.
Output written on tctt1000.600gf (128 characters, 19540 bytes).
Transcript written on tctt1000.log.
mktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/tctt1000.600pk: successfully generated.


Package rerunfilecheck Warning: File `RDKit.out' has changed.
(rerunfilecheck)                Rerun to get outlines right
(rerunfilecheck)                or use package `bookmark'.


LaTeX Warning: There were undefined references.


LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right.

 )
(see the transcript file for additional information) </tmp/texfonts/pk/ljfour/j
knappen/ec/tctt1000.600pk>{/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8
r.enc}
kpathsea: Running mktexpk --mfmode / --bdpi 600 --mag 1+0/600 --dpi 600 tctt0900
mkdir: cannot create directory '././sbuild-nonexistent': Permission denied
mktexpk: Running mf-nowin -progname=mf \mode:=ljfour; mag:=1+0/600; nonstopmode; input tctt0900
This is METAFONT, Version 2.7182818 (TeX Live 2020/Debian) (preloaded base=mf)

(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/tctt0900.mf
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exbase.mf)
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/tctt.mf
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txsymb.mf
 Ok (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/exaccess.mf
 Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txpseudo.mf
 Ok) (/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txaccent.mf
 Ok [0] [1] [2] [3] [4] [5] [6] [7] [8] [9] [10] [11] [12] [27] [29])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txgen.mf
 Ok [100] [109] [98] [99] [108])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txsymbol.mf
 Ok [13] [18] [21] [22] [23] [24] [25] [26] [28] [31] [32] [36] [39] [44]
[45] [46] [42] [47] [60] [61] [62] [77] [79] [87] [110] [91] [93] [94] [95]
[96] [126] [127] [128] [129] [130] [131] [132] [133] [134] [135] [136] [137]
[138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148] [149]
[150] [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] [161]
[162] [163] [164] [165] [166] [167] [168] [169] [171] [172] [173] [174]
[175] [177] [176] [180] [181] [182] [183] [184] [187] [191] [214] [246])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txromod.mf
 Ok [48] [49] [50] [51] [52] [53] [54] [55] [56] [57])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txrsuper.mf
 Ok [185] [178] [179] [170] [186])
(/usr/share/texlive/texmf-dist/fonts/source/jknappen/ec/txrfract.mf
 Ok [188] [189] [190]) ) ) )
Font metrics written on tctt0900.tfm.
Output written on tctt0900.600gf (128 characters, 17564 bytes).
Transcript written on tctt0900.log.
mktexpk: /tmp/texfonts/pk/ljfour/jknappen/ec/tctt0900.600pk: successfully generated.
 </tmp/texfonts/pk/ljfour/jknappen/ec/tctt0900.600pk></usr/share/texlive/
texmf-dist/fonts/type1/public/amsfonts/cm/cmmi5.pfb></usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmsy5.pfb></usr/share/texlive/texmf-dist/fon
ts/type1/urw/courier/ucrb8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/
courier/ucrr8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/courier/ucrro
8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvb8a.pfb></usr
/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvbo8a.pfb></usr/share/texl
ive/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb></usr/share/texlive/texmf-di
st/fonts/type1/urw/times/utmb8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/
urw/times/utmr8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmri
8a.pfb>
Output written on RDKit.pdf (161 pages, 1648370 bytes).
Transcript written on RDKit.log.
Latexmk: Index file 'RDKit.idx' was written
Latexmk: Missing input file: 'RDKit.ind' from line
  'No file RDKit.ind.'
Latexmk: References changed.
Latexmk: References changed.
Latexmk: Log file says output to 'RDKit.pdf'
Rule 'makeindex RDKit.idx': File changes, etc:
   Changed files, or newly in use since previous run(s):
      'RDKit.idx'
------------
Run number 1 of rule 'makeindex RDKit.idx'
------------
------------
Running 'makeindex -s python.ist  -o "RDKit.ind" "RDKit.idx"'
------------
=== TeX engine is 'pdfTeX'
Latexmk: applying rule 'makeindex RDKit.idx'...
This is makeindex, version 2.15 [TeX Live 2020] (kpathsea + Thai support).
Scanning style file ./python.ist.......done (7 attributes redefined, 0 ignored).
Scanning input file RDKit.idx...done (0 entries accepted, 0 rejected).
Nothing written in RDKit.ind.
Transcript written in RDKit.ilg.
Rule 'pdflatex': File changes, etc:
   Changed files, or newly in use since previous run(s):
      'RDKit.aux'
      'RDKit.ind'
      'RDKit.out'
------------
Run number 2 of rule 'pdflatex'
------------
------------
Running 'pdflatex   -recorder  "RDKit.tex"'
------------
Latexmk: applying rule 'pdflatex'...
This is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Debian) (preloaded format=pdflatex)
 restricted \write18 enabled.
entering extended mode
(./RDKit.tex
LaTeX2e <2020-02-02> patch level 5
L3 programming layer <2020-04-06> (./sphinxmanual.cls
Document Class: sphinxmanual 2019/12/01 v2.3.0 Document class (Sphinx manual)
(/usr/share/texlive/texmf-dist/tex/latex/base/report.cls
Document Class: report 2019/12/20 v1.4l Standard LaTeX document class
(/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)))
(/usr/share/texlive/texmf-dist/tex/latex/base/inputenc.sty)
(/usr/share/texlive/texmf-dist/tex/latex/cmap/cmap.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty<<t1.cmap>>)
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty
For additional information on amsmath, use the `?' option.
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty))
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty)
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty))
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty))
(/usr/share/texlive/texmf-dist/tex/generic/babel/babel.sty
(/usr/share/texlive/texmf-dist/tex/generic/babel/switch.def)
(/usr/share/texlive/texmf-dist/tex/generic/babel-english/english.ldf
(/usr/share/texlive/texmf-dist/tex/generic/babel/babel.def
(/usr/share/texlive/texmf-dist/tex/generic/babel/txtbabel.def))))
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty)
(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty) (./sphinx.sty
(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def)))
(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty)
(/usr/share/texlive/texmf-dist/tex/latex/titlesec/titlesec.sty)
(/usr/share/texlive/texmf-dist/tex/latex/tabulary/tabulary.sty
(/usr/share/texlive/texmf-dist/tex/latex/tools/array.sty))
(/usr/share/texlive/texmf-dist/tex/latex/tools/longtable.sty)
(/usr/share/texlive/texmf-dist/tex/latex/varwidth/varwidth.sty)
(./sphinxmulticell.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty)
(/usr/share/texlive/texmf-dist/tex/latex/framed/framed.sty)
(/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg))
(/usr/share/texlive/texmf-dist/tex/latex/fancyvrb/fancyvrb.sty)
(./footnotehyper-sphinx.sty)
(/usr/share/texlive/texmf-dist/tex/latex/float/float.sty)
(/usr/share/texlive/texmf-dist/tex/latex/wrapfig/wrapfig.sty)
(/usr/share/texlive/texmf-dist/tex/latex/parskip/parskip.sty
(/usr/share/texlive/texmf-dist/tex/latex/parskip/parskip-2001-04-09.sty))
(/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty)
(/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty)
(/usr/share/texlive/texmf-dist/tex/latex/capt-of/capt-of.sty)
(/usr/share/texlive/texmf-dist/tex/latex/needspace/needspace.sty)
(./sphinxhighlight.sty)
(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty
(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty)))
(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty
(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty
(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty)))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty
(/usr/share/texlive/texmf-dist/tex/latex/pdftexcmds/pdftexcmds.sty
(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty))
(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty)
(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty)
(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty)
(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def)
(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty)
(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def)
(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)
(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty
(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty))
(/usr/share/texlive/texmf-dist/tex/generic/atbegshi/atbegshi.sty))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def
(/usr/share/texlive/texmf-dist/tex/latex/atveryend/atveryend.sty)
(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty
(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty)))
(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty)
(./sphinxmessages.sty)
Writing index file RDKit.idx
(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdfmode.def)
(./RDKit.aux

LaTeX Warning: Label `Overview:an-overview-of-the-rdkit' multiply defined.


LaTeX Warning: Label `Overview:what-is-it' multiply defined.


LaTeX Warning: Label `Overview:open-source-toolkit-for-cheminformatics' multipl
y defined.


LaTeX Warning: Label `Overview:operational' multiply defined.


LaTeX Warning: Label `Overview:history' multiply defined.


LaTeX Warning: Label `Overview:integration-with-other-open-source-projects' mul
tiply defined.


LaTeX Warning: Label `Overview:usage-by-other-open-source-projects' multiply de
fined.


LaTeX Warning: Label `Overview:the-contrib-directory' multiply defined.


LaTeX Warning: Label `Overview:footnotes' multiply defined.


LaTeX Warning: Label `Overview:license' multiply defined.


LaTeX Warning: Label `Install:installation' multiply defined.


LaTeX Warning: Label `Install:cross-platform-under-anaconda-python-fastest-inst
all' multiply defined.


LaTeX Warning: Label `Install:introduction-to-anaconda' multiply defined.


LaTeX Warning: Label `Install:how-to-get-conda' multiply defined.


LaTeX Warning: Label `Install:how-to-install-rdkit-with-conda' multiply defined
.


LaTeX Warning: Label `Install:conda-forge-package' multiply defined.


LaTeX Warning: Label `Install:how-to-build-from-source-with-conda' multiply def
ined.


LaTeX Warning: Label `Install:macos-10-12-sierra-python-3-environment' multiply
 defined.


LaTeX Warning: Label `Install:linux-x86-64-python-3-environment' multiply defin
ed.


LaTeX Warning: Label `Install:installing-and-using-postgresql-and-the-rdkit-pos
tgresql-cartridge-from-a-conda-environment' multiply defined.


LaTeX Warning: Label `Install:linux-and-os-x' multiply defined.


LaTeX Warning: Label `Install:installation-from-repositories' multiply defined.



LaTeX Warning: Label `Install:ubuntu-12-04-and-later' multiply defined.


LaTeX Warning: Label `Install:fedora-centos-and-rhel' multiply defined.


LaTeX Warning: Label `Install:os-x' multiply defined.


LaTeX Warning: Label `Install:building-from-source' multiply defined.


LaTeX Warning: Label `Install:installing-prerequisites-from-source' multiply de
fined.


LaTeX Warning: Label `Install:installing-boost' multiply defined.


LaTeX Warning: Label `Install:building-the-rdkit' multiply defined.


LaTeX Warning: Label `Install:testing-the-build-optional-but-recommended' multi
ply defined.


LaTeX Warning: Label `Install:advanced' multiply defined.


LaTeX Warning: Label `Install:specifying-install-location' multiply defined.


LaTeX Warning: Label `Install:specifying-an-alternate-boost-installation' multi
ply defined.


LaTeX Warning: Label `Install:specifying-an-alternate-python-installation' mult
iply defined.


LaTeX Warning: Label `Install:disabling-the-python-wrappers' multiply defined.


LaTeX Warning: Label `Install:recommended-extras' multiply defined.


LaTeX Warning: Label `Install:building-the-java-wrappers' multiply defined.


LaTeX Warning: Label `Install:optional-packages' multiply defined.


LaTeX Warning: Label `Install:frequently-encountered-problems' multiply defined
.


LaTeX Warning: Label `Install:windows' multiply defined.


LaTeX Warning: Label `Install:prerequisites' multiply defined.


LaTeX Warning: Label `Install:recommended-extras' multiply defined.


LaTeX Warning: Label `Install:installation-of-rdkit-binaries' multiply defined.



LaTeX Warning: Label `Install:installation-from-source' multiply defined.


LaTeX Warning: Label `Install:extra-software-to-install' multiply defined.


LaTeX Warning: Label `Install:setup-and-preparation' multiply defined.


LaTeX Warning: Label `Install:building-from-the-command-line-recommended' multi
ply defined.


LaTeX Warning: Label `Install:testing-the-build-optional-but-recommended' multi
ply defined.


LaTeX Warning: Label `Install:license' multiply defined.


LaTeX Warning: Label `Cookbook:rdkit-cookbook' multiply defined.


LaTeX Warning: Label `Cookbook:what-is-this' multiply defined.


LaTeX Warning: Label `Cookbook:miscellaneous-topics' multiply defined.


LaTeX Warning: Label `Cookbook:using-a-different-aromaticity-model' multiply de
fined.


LaTeX Warning: Label `Cookbook:manipulating-molecules' multiply defined.


LaTeX Warning: Label `Cookbook:cleaning-up-heterocycles' multiply defined.


LaTeX Warning: Label `Cookbook:parallel-conformation-generation' multiply defin
ed.


LaTeX Warning: Label `Cookbook:neutralizing-charged-molecules' multiply defined
.


LaTeX Warning: Label `Cookbook:d-functionality-in-the-rdkit' multiply defined.


LaTeX Warning: Label `Cookbook:using-scikit-learn-with-rdkit' multiply defined.



LaTeX Warning: Label `Cookbook:using-custom-mcs-atom-types' multiply defined.


LaTeX Warning: Label `Cookbook:clustering-molecules' multiply defined.


LaTeX Warning: Label `Cookbook:rmsd-calculation-between-n-molecules' multiply d
efined.


LaTeX Warning: Label `Cookbook:introduction' multiply defined.


LaTeX Warning: Label `Cookbook:details' multiply defined.


LaTeX Warning: Label `Cookbook:license' multiply defined.


LaTeX Warning: Label `Cartridge:the-rdkit-database-cartridge' multiply defined.



LaTeX Warning: Label `Cartridge:what-is-this' multiply defined.


LaTeX Warning: Label `Cartridge:tutorial' multiply defined.


LaTeX Warning: Label `Cartridge:introduction' multiply defined.


LaTeX Warning: Label `Cartridge:creating-databases' multiply defined.


LaTeX Warning: Label `Cartridge:configuration' multiply defined.


LaTeX Warning: Label `Cartridge:creating-a-database-from-a-file' multiply defin
ed.


LaTeX Warning: Label `Cartridge:loading-chembl' multiply defined.


LaTeX Warning: Label `Cartridge:substructure-searches' multiply defined.


LaTeX Warning: Label `Cartridge:smarts-based-queries' multiply defined.


LaTeX Warning: Label `Cartridge:using-stereochemistry' multiply defined.


LaTeX Warning: Label `Cartridge:tuning-queries' multiply defined.


LaTeX Warning: Label `Cartridge:similarity-searches' multiply defined.


LaTeX Warning: Label `Cartridge:adjusting-the-similarity-cutoff' multiply defin
ed.


LaTeX Warning: Label `Cartridge:using-the-mcs-code' multiply defined.


LaTeX Warning: Label `Cartridge:reference-guide' multiply defined.


LaTeX Warning: Label `Cartridge:new-types' multiply defined.


LaTeX Warning: Label `Cartridge:parameters' multiply defined.


LaTeX Warning: Label `Cartridge:operators' multiply defined.


LaTeX Warning: Label `Cartridge:similarity-search' multiply defined.


LaTeX Warning: Label `Cartridge:substructure-and-exact-structure-search' multip
ly defined.


LaTeX Warning: Label `Cartridge:molecule-comparison' multiply defined.


LaTeX Warning: Label `Cartridge:functions' multiply defined.


LaTeX Warning: Label `Cartridge:fingerprint-related' multiply defined.


LaTeX Warning: Label `Cartridge:generating-fingerprints' multiply defined.


LaTeX Warning: Label `Cartridge:working-with-fingerprints' multiply defined.


LaTeX Warning: Label `Cartridge:fingerprint-i-o' multiply defined.


LaTeX Warning: Label `Cartridge:molecule-related' multiply defined.


LaTeX Warning: Label `Cartridge:molecule-i-o-and-validation' multiply defined.


LaTeX Warning: Label `Cartridge:substructure-operations' multiply defined.


LaTeX Warning: Label `Cartridge:descriptors' multiply defined.


LaTeX Warning: Label `Cartridge:connectivity-descriptors' multiply defined.


LaTeX Warning: Label `Cartridge:mcs' multiply defined.


LaTeX Warning: Label `Cartridge:other' multiply defined.


LaTeX Warning: Label `Cartridge:using-the-cartridge-from-python' multiply defin
ed.


LaTeX Warning: Label `Cartridge:license' multiply defined.


LaTeX Warning: Label `BackwardsIncompatibleChanges:backwards-incompatible-chang
es' multiply defined.


LaTeX Warning: Label `BackwardsIncompatibleChanges:release-2019-09' multiply de
fined.


LaTeX Warning: Label `BackwardsIncompatibleChanges:updated-van-der-waals-radii'
 multiply defined.


LaTeX Warning: Label `BackwardsIncompatibleChanges:r-atoms-in-mol-blocks-are-no
w-converted-into-queries' multiply defined.


LaTeX Warning: Label `BackwardsIncompatibleChanges:pandastools-loadsdf-uses-iso
meric-smiles' multiply defined.


LaTeX Warning: Label `BackwardsIncompatibleChanges:new-fingerprinter-defaults-c
hanged' multiply defined.


LaTeX Warning: Label `BackwardsIncompatibleChanges:release-2019-03' multiply de
fined.


LaTeX Warning: Label `BackwardsIncompatibleChanges:release-2018-09' multiply de
fined.


LaTeX Warning: Label `BackwardsIncompatibleChanges:getatomsmiles-generates-isom
eric-smiles-by-default' multiply defined.


LaTeX Warning: Label `BackwardsIncompatibleChanges:changes-to-ringmatchesringon
ly-option-in-the-mcs-code' multiply defined.


LaTeX Warning: Label `BackwardsIncompatibleChanges:the-conformation-generation-
code-now-uses-etkdg-by-default-when-called-from-python' multiply defined.


LaTeX Warning: Label `BackwardsIncompatibleChanges:release-2018-03' multiply de
fined.


LaTeX Warning: Label `BackwardsIncompatibleChanges:moltosmiles-generates-isomer
ic-smiles-by-default' multiply defined.


LaTeX Warning: Label `BackwardsIncompatibleChanges:moltomolblock-generates-a-2d
-conformation-when-the-includestereo-flag-is-set' multiply defined.


LaTeX Warning: Label `BackwardsIncompatibleChanges:the-conformation-generation-
code-now-uses-etkdg-by-default' multiply defined.


LaTeX Warning: Label `BackwardsIncompatibleChanges:license' multiply defined.

) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1ptm.fd)
(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii
[Loading MPS to PDF converter (version 2006.09.02).]
) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty
(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg))
*geometry* driver: auto-detecting
*geometry* detected driver: pdftex
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty
(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty)
(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty))
(./RDKit.out) (./RDKit.out)
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1phv.fd)<<ot1.cmap>><<oml.cmap
>><<oms.cmap>><<omx.cmap>>
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd)
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [1{/var/lib/texmf/fo
nts/map/pdftex/updmap/pdftex.map}] [2] (./RDKit.toc [1] [2] [3] [4]
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1pcr.fd)) [5] [6]
Chapter 1.
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd)
Underfull \hbox (badness 10000) in paragraph at lines 122--123
[]\T1/ptm/m/n/10 Cheminformatics nodes for KN-IME (dis-tributed from the KN-IME
 com-mu-nity site:
[1]

LaTeX Warning: Hyper reference `Overview:footnote1' on page 2 undefined on inpu
t line 216.

[2] [3] [4]
Chapter 2.
[5] [6] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd) [7] [8]
[9] [10]
Underfull \hbox (badness 10000) in paragraph at lines 742--743
[]\T1/ptm/m/n/10 You can en-able sup-port for the Avalon toolkit by adding the 
ar-gu-ment
[11]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 811.

(/usr/share/texlive/texmf-dist/tex/latex/base/t1cmtt.fd)
(/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmtt.fd)
Underfull \hbox (badness 10000) in paragraph at lines 840--841
[]\T1/ptm/m/n/10 Add \T1/pcr/m/n/10 #define BOOST_PYTHON_NO_PY_SIGNATURES \T1/p
tm/m/n/10 at the top of \T1/pcr/m/n/10 Code/GraphMol/Wrap/
[12] [13] [14]
Underfull \hbox (badness 10000) in paragraph at lines 1023--1024
[]\T1/ptm/m/n/10 Run cmake. Here's an ex-am-ple ba-sic com-mand line for 64bit 
win-dows that will

Underfull \hbox (badness 10000) in paragraph at lines 1023--1024
\T1/ptm/m/n/10 down-load the InChI and Avalon toolkit sources from the InChI Tr
ust and Source-Forge

Underfull \hbox (badness 10000) in paragraph at lines 1023--1024
\T1/ptm/m/n/10 repos-i-to-ries, re-spec-tively, and build the Post-greSQL car-t
ridge for the in-stalled ver-sion

Underfull \hbox (badness 10000) in paragraph at lines 1023--1024
\T1/ptm/m/n/10 of Post-greSQL:\T1/pcr/m/n/10 cmake -DRDK_BUILD_PYTHON_WRAPPERS=
ON -DBOOST_ROOT=C:/

Underfull \hbox (badness 10000) in paragraph at lines 1023--1024
\T1/pcr/m/n/10 boost -DRDK_BUILD_INCHI_SUPPORT=ON -DRDK_BUILD_AVALON_SUPPORT=ON


Underfull \hbox (badness 10000) in paragraph at lines 1023--1024
\T1/pcr/m/n/10 -DRDK_BUILD_PGSQL=ON -DPostgreSQL_ROOT="C:\Program Files\Postgre
SQL\9.5"

Underfull \hbox (badness 10000) in paragraph at lines 1032--1033
[]\T1/pcr/m/n/10 "C:\Program Files\PostgreSQL\9.5\bin\pg_ctl.exe" -N "postgresq
l-9.5"

Underfull \hbox (badness 10000) in paragraph at lines 1038--1039
[]\T1/pcr/m/n/10 "C:\Program Files\PostgreSQL\9.5\bin\pg_ctl.exe" -N "postgresq
l-9.5"
[15] [16]
Chapter 3.
[17]
Underfull \hbox (badness 10000) in paragraph at lines 1135--1136
[]\T1/ptm/m/n/10 displays a mes-sage like: \T1/pcr/m/n/10 [12:18:01] Explicit v
alence for atom # 1 O greater than
[18] [19] [20] [21] [22] [23] [24] [25]
Underfull \hbox (badness 10000) in paragraph at lines 1662--1664
[]\T1/ptm/m/n/10 Another op-tion for Com-pute2DCoords al-lows you to gen-er-ate
 2D de-pic-tions for molecules that

Underfull \hbox (badness 7649) in paragraph at lines 1662--1664
\T1/ptm/m/n/10 closely mimic 3D con-for-ma-tions. This is avail-able us-ing the
 func-tion \T1/pcr/m/n/10 rdkit.Chem.AllChem.

Underfull \hbox (badness 10000) in paragraph at lines 1682--1687
[]\T1/ptm/m/n/10 More fine-grained con-trol can be ob-tained us-ing the core fu
nc-tion \T1/pcr/m/n/10 rdkit.Chem.rdDepictor.
[26 <./picture_1.png (PNG copy)> <./picture_0.png (PNG copy)> <./picture_3.png 
(PNG copy)> <./picture_2.png> <./picture_4.png>] [27] [28] [29 <./cdk2_mol1.png
> <./cdk2_mol2.png>] [30 <./cdk2_molgrid.png>] [31 <./cdk2_molgrid_aligned.png 
(PNG copy)>] [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] [42 <./mfp2_bit8
72.png> <./rdk_bit1553.png>] [43 <./rdk_bit1553_2.png>] [44] [45 <./similarity_
map_fp1.png>] [46 <./similarity_map_fp2.png>] [47 <./similarity_map_fp3.png>]
[48] [49 <./similarity_map_charges.png>] [50 <./similarity_map_crippen.png>]
[51] [52] [53] [54] [55] [56] [57] [58] [59]
Underfull \hbox (badness 6792) in paragraph at lines 3630--3633
[]\T1/ptm/m/n/10 Or we can use the bit rank-ing func-tion-al-ity from the \T1/p
cr/m/n/10 rdkit.ML.InfoTheory.rdInfoTheory.
[60] [61] [62] [63 <./picture_6.png>] [64]
Underfull \hbox (badness 10000) in paragraph at lines 4010--4014
[]|\T1/ptm/m/n/10 Wildman and Crip-pen \T1/ptm/m/it/10 JCICS

Underfull \hbox (badness 10000) in paragraph at lines 4020--4024
[]|\T1/ptm/m/n/10 Wildman and Crip-pen \T1/ptm/m/it/10 JCICS

Overfull \hbox (26.64615pt too wide) in paragraph at lines 4088--4089
[]|\T1/ptm/m/n/10 Num{Aromatic,Saturated,Aliphatic}Rings| 

Overfull \hbox (91.89552pt too wide) in paragraph at lines 4093--4094
[]|\T1/ptm/m/n/10 Num{Aromatic,Saturated,Aliphatic}{Hetero,Carbo}cycles| 

Underfull \hbox (badness 10000) in paragraph at lines 4122--4125
[]|\T1/ptm/m/n/10 Number of bridge-head atoms

Underfull \hbox (badness 10000) in paragraph at lines 4150--4153
\T1/ptm/m/n/10 tions [][]$http : / / www . chemcomp . com /

Underfull \hbox (badness 10000) in paragraph at lines 4159--4163
\T1/ptm/m/n/10 tri-bu-tions [][]$http : / / www . chemcomp .

Underfull \hbox (badness 10000) in paragraph at lines 4169--4173
\T1/ptm/m/n/10 tri-bu-tions [][]$http : / / www . chemcomp .

Underfull \hbox (badness 10000) in paragraph at lines 4205--4208
[]|\T1/ptm/m/n/10 implemented us-ing a set of

Underfull \hbox (badness 10000) in paragraph at lines 4205--4208
\T1/ptm/m/n/10 SMARTS def-i-ni-tions in $(RD-

Overfull \hbox (9.18636pt too wide) in paragraph at lines 4205--4208
\T1/ptm/m/n/10 BASE)/Data/FragmentDescriptors.csv| 

Underfull \hbox (badness 7273) in paragraph at lines 4214--4217
\T1/ptm/m/n/10 and Con-soni ^^PDe-scrip-tors from

Underfull \hbox (badness 10000) in paragraph at lines 4214--4217
\T1/ptm/m/n/10 Chemoin-for-mat-ics [][]$https : / / doi . org /
[65] [66]
Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 De-scrip-

Overfull \hbox (19.3687pt too wide) in paragraph at lines 4364--4364
\T1/ptm/m/n/10 tor/Descriptor

Overfull \hbox (3.88354pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 Lan-

Overfull \hbox (8.88354pt too wide) in paragraph at lines 4364--4364
\T1/ptm/m/n/10 guage| 

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
\T1/ptm/m/n/10 best fit

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 PMI1,

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
\T1/ptm/m/n/10 PMI2,

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 NPR1,

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 Ra-

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
\T1/ptm/m/n/10 dius of

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 In-er-tial

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
\T1/ptm/m/n/10 shape

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 Ec-cen-

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 As-

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 Sphe-

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
\T1/ptm/m/n/10 roc-ity

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 Au-to-

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 GET-

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 
[67]
Underfull \hbox (badness 10000) in paragraph at lines 4444--4444
[]\T1/ptm/m/n/10 Fin-ger-print

Underfull \hbox (badness 10000) in paragraph at lines 4444--4444
[]\T1/ptm/m/n/10 Lan-

Overfull \hbox (2.77637pt too wide) in paragraph at lines 4444--4444
\T1/ptm/m/n/10 guage| 

Underfull \hbox (badness 10000) in paragraph at lines 4444--4444
[]\T1/ptm/m/n/10 Topo-log-i-cal

Underfull \hbox (badness 10000) in paragraph at lines 4444--4444
[]\T1/ptm/m/n/10 Mor-

Underfull \hbox (badness 10000) in paragraph at lines 4444--4444
[]\T1/ptm/m/n/10 2D Phar-ma-

Overfull \hbox (0.97221pt too wide) in paragraph at lines 4494--4494
[]\T1/ptm/m/n/10 Fea-

Overfull \hbox (8.75237pt too wide) in paragraph at lines 4494--4494
[]\T1/ptm/m/n/10 Donor| 

Underfull \hbox (badness 10000) in paragraph at lines 4494--4494
[]\T1/ptm/m/n/10 Ac-

Underfull \hbox (badness 10000) in paragraph at lines 4494--4494
[]\T1/pcr/m/n/10 [$([O,S;H1;v2;!$(*-*=[O,N,P,S])]),$([O,S;H0;v2]),$([O,S;-]),$(
[N;v3;!

Overfull \hbox (2.08232pt too wide) in paragraph at lines 4494--4494
[]\T1/ptm/m/n/10 Aro-

Overfull \hbox (5.422pt too wide) in paragraph at lines 4494--4494
\T1/ptm/m/n/10 matic| 

Overfull \hbox (5.9722pt too wide) in paragraph at lines 4494--4494
[]\T1/ptm/m/n/10 Halo-

Underfull \hbox (badness 10000) in paragraph at lines 4494--4494
[]\T1/ptm/m/n/10 Ba-

Underfull \hbox (badness 10000) in paragraph at lines 4494--4494
[]\T1/pcr/m/n/10 [#7;+,$([N;H2&+0][$([C,a]);!$([C,a](=O))]),$([N;H1&+0]([$([C,a
]);!

Underfull \hbox (badness 10000) in paragraph at lines 4494--4494
\T1/pcr/m/n/10 $([C,a](=O))])[$([C,a]);!$([C,a](=O))]),$([N;H0&+0]([C;!$(C(=O))
])([C;!

Overfull \hbox (9.86208pt too wide) in paragraph at lines 4494--4494
[]\T1/ptm/m/n/10 Acidic| 
[68 <./picture_5.png (PNG copy)>] [69] [70]
Chapter 4.
[71 <./picture_9.png (PNG copy)>] [72 <./picture_8.png> <./picture_7.png (PNG c
opy)>] [73 <./picture_10.png> <./picture_12.png>] [74 <./picture_11.png>]
[75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86 <./picture_10.jpg>]
[87] [88]
Underfull \hbox (badness 10000) in paragraph at lines 6147--6147
[]\T1/ptm/m/n/10 _Chi-ral-i-ty-Pos-si-

Underfull \hbox (badness 10000) in paragraph at lines 6147--6147
[]\T1/ptm/m/n/10 _Re-ac-tion-De-

Underfull \hbox (badness 10000) in paragraph at lines 6147--6147
[]\T1/ptm/m/n/10 mo-lAtomMap-

Underfull \hbox (badness 10000) in paragraph at lines 6147--6147
[]\T1/ptm/m/n/10 molFileIn-ver-

Underfull \hbox (badness 10000) in paragraph at lines 6147--6147
[]\T1/ptm/m/n/10 mol-Rxn-Com-po-
[89] [90]
Underfull \hbox (badness 10000) in paragraph at lines 6286--6290
[]\T1/ptm/m/n/10 By de-fault the \T1/pcr/m/n/10 rdkit.Chem.rdmolfiles.SDMolSupp
lier \T1/ptm/m/n/10 and \T1/pcr/m/n/10 rdkit.Chem.rdmolfiles.

Underfull \hbox (badness 6559) in paragraph at lines 6286--6290
\T1/pcr/m/n/10 ForwardSDMolSupplier \T1/ptm/m/n/10 classes (\T1/pcr/m/n/10 RDKi
t::SDMolSupplier \T1/ptm/m/n/10 and \T1/pcr/m/n/10 RDKit::ForwardMolSupplier
[91]
Underfull \hbox (badness 10000) in paragraph at lines 6335--6338
[]\T1/ptm/m/n/10 If you have atom prop-er-ties that you would like to have writ
-ten to SDF files, you can

Underfull \hbox (badness 10000) in paragraph at lines 6335--6338
\T1/ptm/m/n/10 use the func-tions \T1/pcr/m/n/10 rdkit.Chem.rdmolfiles.CreateAt
omStringPropertyList()\T1/ptm/m/n/10 ,

Underfull \hbox (badness 10000) in paragraph at lines 6335--6338
\T1/pcr/m/n/10 rdkit.Chem.rdmolfiles.CreateAtomIntPropertyList()\T1/ptm/m/n/10 
, \T1/pcr/m/n/10 rdkit.Chem.

Underfull \hbox (badness 10000) in paragraph at lines 6335--6338
\T1/pcr/m/n/10 rdmolfiles.CreateAtomDoublePropertyList()\T1/ptm/m/n/10 , or \T1
/pcr/m/n/10 rdkit.Chem.rdmolfiles.
[92]
Underfull \hbox (badness 10000) in paragraph at lines 6446--6446
[]\T1/phv/m/n/10 Mix-

Underfull \hbox (badness 10000) in paragraph at lines 6446--6446
[]\T1/ptm/m/n/10 mix-

Underfull \hbox (badness 10000) in paragraph at lines 6446--6446
[]\T1/ptm/m/n/10 mix-

Underfull \hbox (badness 10000) in paragraph at lines 6446--6446
[]\T1/ptm/m/n/10 mix-

Underfull \hbox (badness 10000) in paragraph at lines 6446--6446
[]\T1/ptm/m/n/10 mix-
[93] [94 <./enhanced_stereo_and1_and2_base.png> <./enhanced_stereo_and1_and2_ex
pand.png> <./enhanced_stereo_and1_cis_base.png> <./enhanced_stereo_and1_cis_exp
and.png> <./enhanced_stereo_and1_trans_base.png> <./enhanced_stereo_and1_trans_
expand.png> <./enhanced_stereo_or1_or2_base.png> <./enhanced_stereo_or1_cis_bas
e.png> <./enhanced_stereo_or1_trans_base.png> <./enhanced_stereo_abs_and_base.p
ng> <./enhanced_stereo_abs_and_expand.png> <./enhanced_stereo_abs_or_base.png>]

Underfull \hbox (badness 7558) in paragraph at lines 6461--6463
[]\T1/ptm/m/n/10 It is pos-si-ble to enu-mer-ate the el-e-ments of a \T1/pcr/m/
n/10 StereoGroup \T1/ptm/m/n/10 us-ing the func-tion \T1/pcr/m/n/10 rdkit.Chem.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 6475--6476
[]\T1/ptm/m/n/10 Reactions also pre-serve \T1/pcr/m/n/10 StereoGroup\TS1/cmtt/m
/n/10 ``\T1/pcr/m/n/10 s. Product atoms are included in the
[95] [96] [97] [98]
Chapter 5.
[99] [100 <./indole1.png>] [101] [102] [103] [104] [105] [106] [107] [108]
Underfull \hbox (badness 10000) in paragraph at lines 7184--7185
[]\T1/ptm/m/n/10 IPython note-book: [][]$http : / / nbviewer . ipython . org / 
gist / greglandrum / 8351725$[][] [][]$https : / / gist . github . com / gregla
ndrum /
[109 <./similarity_map_rf.png>] [110] [111] [112] [113] [114]
Chapter 6.
[115] [116] [117] [118]
Overfull \hbox (1096.24321pt too wide) in paragraph at lines 7685--7685
[]\T1/pcr/m/n/9 CC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)[C[]@[][]\T1/pcr/b/n/
9 @H[]\T1/pcr/m/n/9 ][]1[]NC([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][
]2[]CCCN2C([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCCN2C([]=[]O)
[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ]([C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 
](C)CC)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CO)NC([]=[]O)[C[]\T1/pcr
/b/n/9 @H[]\T1/pcr/m/n/9 ](C)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ]([C
[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)O)NC([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T
1/pcr/m/n/9 ][]2[]CSSC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](NC1[]=[]O)C([]=[]O)
N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc1cnc[nH][]1[])C([]=[]O)N[C[]\T1/p
cr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc1ccccc1)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1
/pcr/m/n/9 ](CCCNC([]=[]N)N)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 
](Cc1c[nH]c3ccccc13)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CCCNC(
[]=[]N)N)C([]=[]O)N2|  

Overfull \hbox (167.44426pt too wide) in paragraph at lines 7687--7687
[]\T1/pcr/m/n/9 CN1C([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CCCNC([]=[]N)
N)NC([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2ccc(O)cc2)NC([]=[]O)[
C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCCN2C([]=[]O)[C[]\T1/pcr/b/n/9 @
H[]\T1/pcr/m/n/9 ](Cc2ccc3ccccc3c2)NC([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr
/m/n/9 ][]1[]CC([]=[]O)O|  

Overfull \hbox (113.44432pt too wide) in paragraph at lines 7688--7688
[]\T1/pcr/m/n/9 NCCCC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](NC([]=[]O)[C[]\T1/pc
r/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc1ccc(OP([]=[]O)(O)O)cc1)NC([]=[]O)Cc1ccccc1)C([]=
[]O)N1CCC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]1[]C([]=[]O)N[C[]@[][]\T1/pcr/b
/n/9 @H[]\T1/pcr/m/n/9 ](Cc1ccccc1)C(N)[]=[]O|  

Overfull \hbox (675.04369pt too wide) in paragraph at lines 7689--7689
[]\T1/pcr/m/n/9 CCCCCCCCCCCCCCCCNC([]=[]O)CN(CC([]=[]O)NC(C)(C)C([]=[]O)N[C[]@[
][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc1ccccc1)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9
 @H[]\T1/pcr/m/n/9 ](CC(C)C)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 
](Cc1ccccc1)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CCCNC([]=[]N)N
)C([]=[]O)N1CCC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]1[]C([]=[]O)N[C[]@[][]\T1
/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CCCNC([]=[]N)N)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 
@H[]\T1/pcr/m/n/9 ](CC(N)[]=[]O)C(N)[]=[]O)C([]=[]O)c1cccnc1|  

Overfull \hbox (491.4439pt too wide) in paragraph at lines 7690--7690
[]\T1/pcr/m/n/9 CCCCCCCCCCCCCCCCN(CCCCCCCCCCCCCCCC)CCCCCC([]=[]O)NC(C)(C)C([]=[
]O)NC(Cc1ccccc1)C([]=[]O)NC(CC(C)C)C([]=[]O)NC(Cc1ccccc1)C([]=[]O)NC(CCCNC([]=[
]N)N)C([]=[]O)N1CCCC1C([]=[]O)NC(CCCNC([]=[]N)N)C([]=[]O)NC(CC(N)[]=[]O)C(N)[]=
[]O|  

Overfull \hbox (383.44402pt too wide) in paragraph at lines 7691--7691
[]\T1/pcr/m/n/9 CC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)[C[]@[][]\T1/pcr/b/n/
9 @H[]\T1/pcr/m/n/9 ][]1[]NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2cc
ccc2)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)NC([]=[]O)[C[]@[][]
\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCCN2C([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/p
cr/m/n/9 ](Cc2ccccc2)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C(C)C)NC([
]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)NC([]=[]O)[C[]\T1/pcr/b/n/9 
@H[]\T1/pcr/m/n/9 ](CCSC)NC1[]=[]O|  

Overfull \hbox (394.244pt too wide) in paragraph at lines 7692--7692
[]\T1/pcr/m/n/9 CC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)[C[]@[][]\T1/pcr/b/n/
9 @H[]\T1/pcr/m/n/9 ][]1[]NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2cc
ccc2)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)NC([]=[]O)[C[]@[][]
\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCCN2C([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/p
cr/m/n/9 ](Cc2ccccc2)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C(C)C)NC([
]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)NC([]=[]O)[C[]\T1/pcr/b/n/9 
@H[]\T1/pcr/m/n/9 ](CC[S[]+[]](C)[O[]- 

Overfull \hbox (448.24394pt too wide) in paragraph at lines 7693--7693
[]\T1/pcr/m/n/9 CC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)[C[]@[][]\T1/pcr/b/n/
9 @H[]\T1/pcr/m/n/9 ][]1[]NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2c[
nH]c3ccccc23)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2ccccc2)NC([]=[]
O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2ccccc2)NC([]=[]O)[C[]@[][]\T1/pcr/b/
n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCCN2C([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ]
(CCSC)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)NC([]=[]O)[C[]\T1/
pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC[S[]+[]](C)[O[]- 

Overfull \hbox (270.04414pt too wide) in paragraph at lines 7694--7694
[][]\T1/pcr/m/n/9 ])NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C(C)C)NC([]
=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2c[nH]c3ccccc23)NC([]=[]O)[C[]\T1/
pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2ccccc2)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr
/m/n/9 ](Cc2ccccc2)NC([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCC
N2C([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC[S[]+[]](C)[O[]- 
[119]
Overfull \hbox (1096.24321pt too wide) in paragraph at lines 7707--7707
[]\T1/pcr/m/n/9 CC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)[C[]@[][]\T1/pcr/b/n/
9 @H[]\T1/pcr/m/n/9 ][]1[]NC([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][
]2[]CCCN2C([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCCN2C([]=[]O)
[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ]([C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 
](C)CC)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CO)NC([]=[]O)[C[]\T1/pcr
/b/n/9 @H[]\T1/pcr/m/n/9 ](C)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ]([C
[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)O)NC([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T
1/pcr/m/n/9 ][]2[]CSSC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](NC1[]=[]O)C([]=[]O)
N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc1cnc[nH][]1[])C([]=[]O)N[C[]\T1/p
cr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc1ccccc1)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1
/pcr/m/n/9 ](CCCNC([]=[]N)N)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 
](Cc1c[nH]c3ccccc13)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CCCNC(
[]=[]N)N)C([]=[]O)N2|  

Overfull \hbox (167.44426pt too wide) in paragraph at lines 7709--7709
[]\T1/pcr/m/n/9 CN1C([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CCCNC([]=[]N)
N)NC([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2ccc(O)cc2)NC([]=[]O)[
C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCCN2C([]=[]O)[C[]\T1/pcr/b/n/9 @
H[]\T1/pcr/m/n/9 ](Cc2ccc3ccccc3c2)NC([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr
/m/n/9 ][]1[]CC([]=[]O)O|  

Overfull \hbox (113.44432pt too wide) in paragraph at lines 7710--7710
[]\T1/pcr/m/n/9 NCCCC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](NC([]=[]O)[C[]\T1/pc
r/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc1ccc(OP([]=[]O)(O)O)cc1)NC([]=[]O)Cc1ccccc1)C([]=
[]O)N1CCC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]1[]C([]=[]O)N[C[]@[][]\T1/pcr/b
/n/9 @H[]\T1/pcr/m/n/9 ](Cc1ccccc1)C(N)[]=[]O|  

Overfull \hbox (675.04369pt too wide) in paragraph at lines 7711--7711
[]\T1/pcr/m/n/9 CCCCCCCCCCCCCCCCNC([]=[]O)CN(CC([]=[]O)NC(C)(C)C([]=[]O)N[C[]@[
][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc1ccccc1)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9
 @H[]\T1/pcr/m/n/9 ](CC(C)C)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 
](Cc1ccccc1)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CCCNC([]=[]N)N
)C([]=[]O)N1CCC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]1[]C([]=[]O)N[C[]@[][]\T1
/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CCCNC([]=[]N)N)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 
@H[]\T1/pcr/m/n/9 ](CC(N)[]=[]O)C(N)[]=[]O)C([]=[]O)c1cccnc1|  

Overfull \hbox (383.44402pt too wide) in paragraph at lines 7712--7712
[]\T1/pcr/m/n/9 CC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)[C[]@[][]\T1/pcr/b/n/
9 @H[]\T1/pcr/m/n/9 ][]1[]NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2cc
ccc2)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)NC([]=[]O)[C[]@[][]
\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCCN2C([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/p
cr/m/n/9 ](Cc2ccccc2)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C(C)C)NC([
]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)NC([]=[]O)[C[]\T1/pcr/b/n/9 
@H[]\T1/pcr/m/n/9 ](CCSC)NC1[]=[]O|  

Overfull \hbox (394.244pt too wide) in paragraph at lines 7713--7713
[]\T1/pcr/m/n/9 CC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)[C[]@[][]\T1/pcr/b/n/
9 @H[]\T1/pcr/m/n/9 ][]1[]NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2cc
ccc2)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)NC([]=[]O)[C[]@[][]
\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCCN2C([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/p
cr/m/n/9 ](Cc2ccccc2)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C(C)C)NC([
]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)NC([]=[]O)[C[]\T1/pcr/b/n/9 
@H[]\T1/pcr/m/n/9 ](CC[S[]+[]](C)[O[]- 

Overfull \hbox (448.24394pt too wide) in paragraph at lines 7714--7714
[]\T1/pcr/m/n/9 CC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)[C[]@[][]\T1/pcr/b/n/
9 @H[]\T1/pcr/m/n/9 ][]1[]NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2c[
nH]c3ccccc23)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2ccccc2)NC([]=[]
O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2ccccc2)NC([]=[]O)[C[]@[][]\T1/pcr/b/
n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCCN2C([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ]
(CCSC)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)NC([]=[]O)[C[]\T1/
pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC[S[]+[]](C)[O[]- 

Overfull \hbox (270.04414pt too wide) in paragraph at lines 7715--7715
[][]\T1/pcr/m/n/9 ])NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C(C)C)NC([]
=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2c[nH]c3ccccc23)NC([]=[]O)[C[]\T1/
pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2ccccc2)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr
/m/n/9 ](Cc2ccccc2)NC([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCC
N2C([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC[S[]+[]](C)[O[]- 

Overfull \hbox (550.84383pt too wide) in paragraph at lines 7716--7716
[]\T1/pcr/m/n/9 CC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)[C[]\T1/pcr/b/n/9 @H[
]\T1/pcr/m/n/9 ](N)C([]=[]O)N[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C([]=[]O)N[C
[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)C([]=[]O)N[C[]\T1/pcr/b/n/9 @H[
]\T1/pcr/m/n/9 ](C([]=[]O)N1CCC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]1[]C([]=[
]O)N1CCC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]1[]C([]=[]O)N[C[]\T1/pcr/b/n/9 @
H[]\T1/pcr/m/n/9 ](CCC([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CCC([
]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)C([]=[]O)O)Cc1ccccc1)C
c1ccccc1)C(C)C)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)CC|  
[120] [121] [122]
Overfull \vbox (1.18257pt too high) detected at line 7924
[123] [124] [125] [126] [127] [128] [129] [130] [131] [132]
Chapter 7.
[133] [134] [135] [136]
Chapter 8.
[137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148]
[149] [150] [151] [152] [153] [154]
Chapter 9.
[155] [156]
Chapter 10.
(./RDKit.ind) [157] (./RDKit.aux)

LaTeX Warning: There were undefined references.


LaTeX Warning: There were multiply-defined labels.

 )
(see the transcript file for additional information) </tmp/texfonts/pk/ljfour/j
knappen/ec/tctt1000.600pk>{/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8
r.enc} </tmp/texfonts/pk/ljfour/jknappen/ec/tctt0900.600pk></usr/share/texlive/
texmf-dist/fonts/type1/public/amsfonts/cm/cmmi5.pfb></usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmsy5.pfb></usr/share/texlive/texmf-dist/fon
ts/type1/urw/courier/ucrb8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/
courier/ucrr8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/courier/ucrro
8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvb8a.pfb></usr
/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvbo8a.pfb></usr/share/texl
ive/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb></usr/share/texlive/texmf-di
st/fonts/type1/urw/times/utmb8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/
urw/times/utmr8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmri
8a.pfb>
Output written on RDKit.pdf (165 pages, 1682595 bytes).
Transcript written on RDKit.log.
Latexmk: Index file 'RDKit.idx' was written
Latexmk: Log file says output to 'RDKit.pdf'
Latexmk: List of undefined refs and citations:
  Label `BackwardsIncompatibleChanges:backwards-incompatible-changes' multiply defined
  Label `BackwardsIncompatibleChanges:changes-to-ringmatchesringonly-option-in-the-mcs-code' multiply defined
  Label `BackwardsIncompatibleChanges:getatomsmiles-generates-isomeric-smiles-by-default' multiply defined
  Label `BackwardsIncompatibleChanges:license' multiply defined
  Label `BackwardsIncompatibleChanges:moltomolblock-generates-a-2d-conformation-when-the-includestereo-flag-is-set' multiply defined
  Label `BackwardsIncompatibleChanges:moltosmiles-generates-isomeric-smiles-by-default' multiply defined
  Label `BackwardsIncompatibleChanges:new-fingerprinter-defaults-changed' multiply defined
  Label `BackwardsIncompatibleChanges:pandastools-loadsdf-uses-isomeric-smiles' multiply defined
  Label `BackwardsIncompatibleChanges:r-atoms-in-mol-blocks-are-now-converted-into-queries' multiply defined
  Label `BackwardsIncompatibleChanges:release-2018-03' multiply defined
  Label `BackwardsIncompatibleChanges:release-2018-09' multiply defined
  Label `BackwardsIncompatibleChanges:release-2019-03' multiply defined
  Label `BackwardsIncompatibleChanges:release-2019-09' multiply defined
  Label `BackwardsIncompatibleChanges:the-conformation-generation-code-now-uses-etkdg-by-default' multiply defined
  Label `BackwardsIncompatibleChanges:the-conformation-generation-code-now-uses-etkdg-by-default-when-called-from-python' multiply defined
  Label `BackwardsIncompatibleChanges:updated-van-der-waals-radii' multiply defined
  Label `Cartridge:adjusting-the-similarity-cutoff' multiply defined
  Label `Cartridge:configuration' multiply defined
  Label `Cartridge:connectivity-descriptors' multiply defined
  Label `Cartridge:creating-a-database-from-a-file' multiply defined
  Label `Cartridge:creating-databases' multiply defined
  Label `Cartridge:descriptors' multiply defined
  Label `Cartridge:fingerprint-i-o' multiply defined
  Label `Cartridge:fingerprint-related' multiply defined
  Label `Cartridge:functions' multiply defined
  Label `Cartridge:generating-fingerprints' multiply defined
  Label `Cartridge:introduction' multiply defined
  Label `Cartridge:license' multiply defined
  Label `Cartridge:loading-chembl' multiply defined
  Label `Cartridge:mcs' multiply defined
  Label `Cartridge:molecule-comparison' multiply defined
  Label `Cartridge:molecule-i-o-and-validation' multiply defined
  Label `Cartridge:molecule-related' multiply defined
  Label `Cartridge:new-types' multiply defined
  Label `Cartridge:operators' multiply defined
  Label `Cartridge:other' multiply defined
  Label `Cartridge:parameters' multiply defined
  Label `Cartridge:reference-guide' multiply defined
  Label `Cartridge:similarity-search' multiply defined
  Label `Cartridge:similarity-searches' multiply defined
  Label `Cartridge:smarts-based-queries' multiply defined
  Label `Cartridge:substructure-and-exact-structure-search' multiply defined
  Label `Cartridge:substructure-operations' multiply defined
  Label `Cartridge:substructure-searches' multiply defined
  Label `Cartridge:the-rdkit-database-cartridge' multiply defined
  Label `Cartridge:tuning-queries' multiply defined
  Label `Cartridge:tutorial' multiply defined
  Label `Cartridge:using-stereochemistry' multiply defined
  Label `Cartridge:using-the-cartridge-from-python' multiply defined
  Label `Cartridge:using-the-mcs-code' multiply defined
  Label `Cartridge:what-is-this' multiply defined
  Label `Cartridge:working-with-fingerprints' multiply defined
  Label `Cookbook:cleaning-up-heterocycles' multiply defined
  Label `Cookbook:clustering-molecules' multiply defined
  Label `Cookbook:d-functionality-in-the-rdkit' multiply defined
  Label `Cookbook:details' multiply defined
  Label `Cookbook:introduction' multiply defined
  Label `Cookbook:license' multiply defined
  Label `Cookbook:manipulating-molecules' multiply defined
  Label `Cookbook:miscellaneous-topics' multiply defined
  Label `Cookbook:neutralizing-charged-molecules' multiply defined
  Label `Cookbook:parallel-conformation-generation' multiply defined
  Label `Cookbook:rdkit-cookbook' multiply defined
  Label `Cookbook:rmsd-calculation-between-n-molecules' multiply defined
  Label `Cookbook:using-a-different-aromaticity-model' multiply defined
  Label `Cookbook:using-custom-mcs-atom-types' multiply defined
  Label `Cookbook:using-scikit-learn-with-rdkit' multiply defined
  Label `Cookbook:what-is-this' multiply defined
  Label `Install:advanced' multiply defined
  Label `Install:building-from-source' multiply defined
  Label `Install:building-from-the-command-line-recommended' multiply defined
  Label `Install:building-the-java-wrappers' multiply defined
  Label `Install:building-the-rdkit' multiply defined
  Label `Install:conda-forge-package' multiply defined
  Label `Install:cross-platform-under-anaconda-python-fastest-install' multiply defined
  Label `Install:disabling-the-python-wrappers' multiply defined
  Label `Install:extra-software-to-install' multiply defined
  Label `Install:fedora-centos-and-rhel' multiply defined
  Label `Install:frequently-encountered-problems' multiply defined
  Label `Install:how-to-build-from-source-with-conda' multiply defined
  Label `Install:how-to-get-conda' multiply defined
  Label `Install:how-to-install-rdkit-with-conda' multiply defined
  Label `Install:installation' multiply defined
  Label `Install:installation-from-repositories' multiply defined
  Label `Install:installation-from-source' multiply defined
  Label `Install:installation-of-rdkit-binaries' multiply defined
  Label `Install:installing-and-using-postgresql-and-the-rdkit-postgresql-cartridge-from-a-conda-environment' multiply defined
  Label `Install:installing-boost' multiply defined
  Label `Install:installing-prerequisites-from-source' multiply defined
  Label `Install:introduction-to-anaconda' multiply defined
  Label `Install:license' multiply defined
  Label `Install:linux-and-os-x' multiply defined
  Label `Install:linux-x86-64-python-3-environment' multiply defined
  Label `Install:macos-10-12-sierra-python-3-environment' multiply defined
  Label `Install:optional-packages' multiply defined
  Label `Install:os-x' multiply defined
  Label `Install:prerequisites' multiply defined
  Label `Install:recommended-extras' multiply defined
  Label `Install:setup-and-preparation' multiply defined
  Label `Install:specifying-an-alternate-boost-installation' multiply defined
  Label `Install:specifying-an-alternate-python-installation' multiply defined
  Label `Install:specifying-install-location' multiply defined
  Label `Install:testing-the-build-optional-but-recommended' multiply defined
  Label `Install:ubuntu-12-04-and-later' multiply defined
  Label `Install:windows' multiply defined
  Label `Overview:an-overview-of-the-rdkit' multiply defined
  Label `Overview:footnotes' multiply defined
  Label `Overview:history' multiply defined
  Label `Overview:integration-with-other-open-source-projects' multiply defined
  Label `Overview:license' multiply defined
  Label `Overview:open-source-toolkit-for-cheminformatics' multiply defined
  Label `Overview:operational' multiply defined
  Label `Overview:the-contrib-directory' multiply defined
  Label `Overview:usage-by-other-open-source-projects' multiply defined
  Label `Overview:what-is-it' multiply defined
Rule 'pdflatex': File changes, etc:
   Changed files, or newly in use since previous run(s):
      'RDKit.toc'
------------
Run number 3 of rule 'pdflatex'
------------
------------
Running 'pdflatex   -recorder  "RDKit.tex"'
------------
=== TeX engine is 'pdfTeX'
Latexmk: applying rule 'pdflatex'...
This is pdfTeX, Version 3.14159265-2.6-1.40.21 (TeX Live 2020/Debian) (preloaded format=pdflatex)
 restricted \write18 enabled.
entering extended mode
(./RDKit.tex
LaTeX2e <2020-02-02> patch level 5
L3 programming layer <2020-04-06> (./sphinxmanual.cls
Document Class: sphinxmanual 2019/12/01 v2.3.0 Document class (Sphinx manual)
(/usr/share/texlive/texmf-dist/tex/latex/base/report.cls
Document Class: report 2019/12/20 v1.4l Standard LaTeX document class
(/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo)))
(/usr/share/texlive/texmf-dist/tex/latex/base/inputenc.sty)
(/usr/share/texlive/texmf-dist/tex/latex/cmap/cmap.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty<<t1.cmap>>)
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty
For additional information on amsmath, use the `?' option.
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty))
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty)
(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty))
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty))
(/usr/share/texlive/texmf-dist/tex/generic/babel/babel.sty
(/usr/share/texlive/texmf-dist/tex/generic/babel/switch.def)
(/usr/share/texlive/texmf-dist/tex/generic/babel-english/english.ldf
(/usr/share/texlive/texmf-dist/tex/generic/babel/babel.def
(/usr/share/texlive/texmf-dist/tex/generic/babel/txtbabel.def))))
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/times.sty)
(/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty) (./sphinx.sty
(/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg)
(/usr/share/texlive/texmf-dist/tex/latex/graphics-def/pdftex.def)))
(/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty)
(/usr/share/texlive/texmf-dist/tex/latex/titlesec/titlesec.sty)
(/usr/share/texlive/texmf-dist/tex/latex/tabulary/tabulary.sty
(/usr/share/texlive/texmf-dist/tex/latex/tools/array.sty))
(/usr/share/texlive/texmf-dist/tex/latex/tools/longtable.sty)
(/usr/share/texlive/texmf-dist/tex/latex/varwidth/varwidth.sty)
(./sphinxmulticell.sty)
(/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty)
(/usr/share/texlive/texmf-dist/tex/latex/framed/framed.sty)
(/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty
(/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg))
(/usr/share/texlive/texmf-dist/tex/latex/fancyvrb/fancyvrb.sty)
(./footnotehyper-sphinx.sty)
(/usr/share/texlive/texmf-dist/tex/latex/float/float.sty)
(/usr/share/texlive/texmf-dist/tex/latex/wrapfig/wrapfig.sty)
(/usr/share/texlive/texmf-dist/tex/latex/parskip/parskip.sty
(/usr/share/texlive/texmf-dist/tex/latex/parskip/parskip-2001-04-09.sty))
(/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty)
(/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty)
(/usr/share/texlive/texmf-dist/tex/latex/capt-of/capt-of.sty)
(/usr/share/texlive/texmf-dist/tex/latex/needspace/needspace.sty)
(./sphinxhighlight.sty)
(/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty
(/usr/share/texlive/texmf-dist/tex/generic/kvsetkeys/kvsetkeys.sty)))
(/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty
(/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty
(/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty)))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty
(/usr/share/texlive/texmf-dist/tex/latex/pdftexcmds/pdftexcmds.sty
(/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty))
(/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty)
(/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty)
(/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty)
(/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def)
(/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty)
(/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty)
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def)
(/usr/share/texlive/texmf-dist/tex/latex/url/url.sty)
(/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty
(/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty))
(/usr/share/texlive/texmf-dist/tex/generic/atbegshi/atbegshi.sty))
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/hpdftex.def
(/usr/share/texlive/texmf-dist/tex/latex/atveryend/atveryend.sty)
(/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty
(/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty)))
(/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty)
(./sphinxmessages.sty)
Writing index file RDKit.idx
(/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdfmode.def)
(./RDKit.aux

LaTeX Warning: Label `Overview:an-overview-of-the-rdkit' multiply defined.


LaTeX Warning: Label `Overview:what-is-it' multiply defined.


LaTeX Warning: Label `Overview:open-source-toolkit-for-cheminformatics' multipl
y defined.


LaTeX Warning: Label `Overview:operational' multiply defined.


LaTeX Warning: Label `Overview:history' multiply defined.


LaTeX Warning: Label `Overview:integration-with-other-open-source-projects' mul
tiply defined.


LaTeX Warning: Label `Overview:usage-by-other-open-source-projects' multiply de
fined.


LaTeX Warning: Label `Overview:the-contrib-directory' multiply defined.


LaTeX Warning: Label `Overview:footnotes' multiply defined.


LaTeX Warning: Label `Overview:license' multiply defined.


LaTeX Warning: Label `Install:installation' multiply defined.


LaTeX Warning: Label `Install:cross-platform-under-anaconda-python-fastest-inst
all' multiply defined.


LaTeX Warning: Label `Install:introduction-to-anaconda' multiply defined.


LaTeX Warning: Label `Install:how-to-get-conda' multiply defined.


LaTeX Warning: Label `Install:how-to-install-rdkit-with-conda' multiply defined
.


LaTeX Warning: Label `Install:conda-forge-package' multiply defined.


LaTeX Warning: Label `Install:how-to-build-from-source-with-conda' multiply def
ined.


LaTeX Warning: Label `Install:macos-10-12-sierra-python-3-environment' multiply
 defined.


LaTeX Warning: Label `Install:linux-x86-64-python-3-environment' multiply defin
ed.


LaTeX Warning: Label `Install:installing-and-using-postgresql-and-the-rdkit-pos
tgresql-cartridge-from-a-conda-environment' multiply defined.


LaTeX Warning: Label `Install:linux-and-os-x' multiply defined.


LaTeX Warning: Label `Install:installation-from-repositories' multiply defined.



LaTeX Warning: Label `Install:ubuntu-12-04-and-later' multiply defined.


LaTeX Warning: Label `Install:fedora-centos-and-rhel' multiply defined.


LaTeX Warning: Label `Install:os-x' multiply defined.


LaTeX Warning: Label `Install:building-from-source' multiply defined.


LaTeX Warning: Label `Install:installing-prerequisites-from-source' multiply de
fined.


LaTeX Warning: Label `Install:installing-boost' multiply defined.


LaTeX Warning: Label `Install:building-the-rdkit' multiply defined.


LaTeX Warning: Label `Install:testing-the-build-optional-but-recommended' multi
ply defined.


LaTeX Warning: Label `Install:advanced' multiply defined.


LaTeX Warning: Label `Install:specifying-install-location' multiply defined.


LaTeX Warning: Label `Install:specifying-an-alternate-boost-installation' multi
ply defined.


LaTeX Warning: Label `Install:specifying-an-alternate-python-installation' mult
iply defined.


LaTeX Warning: Label `Install:disabling-the-python-wrappers' multiply defined.


LaTeX Warning: Label `Install:recommended-extras' multiply defined.


LaTeX Warning: Label `Install:building-the-java-wrappers' multiply defined.


LaTeX Warning: Label `Install:optional-packages' multiply defined.


LaTeX Warning: Label `Install:frequently-encountered-problems' multiply defined
.


LaTeX Warning: Label `Install:windows' multiply defined.


LaTeX Warning: Label `Install:prerequisites' multiply defined.


LaTeX Warning: Label `Install:recommended-extras' multiply defined.


LaTeX Warning: Label `Install:installation-of-rdkit-binaries' multiply defined.



LaTeX Warning: Label `Install:installation-from-source' multiply defined.


LaTeX Warning: Label `Install:extra-software-to-install' multiply defined.


LaTeX Warning: Label `Install:setup-and-preparation' multiply defined.


LaTeX Warning: Label `Install:building-from-the-command-line-recommended' multi
ply defined.


LaTeX Warning: Label `Install:testing-the-build-optional-but-recommended' multi
ply defined.


LaTeX Warning: Label `Install:license' multiply defined.


LaTeX Warning: Label `Cookbook:rdkit-cookbook' multiply defined.


LaTeX Warning: Label `Cookbook:what-is-this' multiply defined.


LaTeX Warning: Label `Cookbook:miscellaneous-topics' multiply defined.


LaTeX Warning: Label `Cookbook:using-a-different-aromaticity-model' multiply de
fined.


LaTeX Warning: Label `Cookbook:manipulating-molecules' multiply defined.


LaTeX Warning: Label `Cookbook:cleaning-up-heterocycles' multiply defined.


LaTeX Warning: Label `Cookbook:parallel-conformation-generation' multiply defin
ed.


LaTeX Warning: Label `Cookbook:neutralizing-charged-molecules' multiply defined
.


LaTeX Warning: Label `Cookbook:d-functionality-in-the-rdkit' multiply defined.


LaTeX Warning: Label `Cookbook:using-scikit-learn-with-rdkit' multiply defined.



LaTeX Warning: Label `Cookbook:using-custom-mcs-atom-types' multiply defined.


LaTeX Warning: Label `Cookbook:clustering-molecules' multiply defined.


LaTeX Warning: Label `Cookbook:rmsd-calculation-between-n-molecules' multiply d
efined.


LaTeX Warning: Label `Cookbook:introduction' multiply defined.


LaTeX Warning: Label `Cookbook:details' multiply defined.


LaTeX Warning: Label `Cookbook:license' multiply defined.


LaTeX Warning: Label `Cartridge:the-rdkit-database-cartridge' multiply defined.



LaTeX Warning: Label `Cartridge:what-is-this' multiply defined.


LaTeX Warning: Label `Cartridge:tutorial' multiply defined.


LaTeX Warning: Label `Cartridge:introduction' multiply defined.


LaTeX Warning: Label `Cartridge:creating-databases' multiply defined.


LaTeX Warning: Label `Cartridge:configuration' multiply defined.


LaTeX Warning: Label `Cartridge:creating-a-database-from-a-file' multiply defin
ed.


LaTeX Warning: Label `Cartridge:loading-chembl' multiply defined.


LaTeX Warning: Label `Cartridge:substructure-searches' multiply defined.


LaTeX Warning: Label `Cartridge:smarts-based-queries' multiply defined.


LaTeX Warning: Label `Cartridge:using-stereochemistry' multiply defined.


LaTeX Warning: Label `Cartridge:tuning-queries' multiply defined.


LaTeX Warning: Label `Cartridge:similarity-searches' multiply defined.


LaTeX Warning: Label `Cartridge:adjusting-the-similarity-cutoff' multiply defin
ed.


LaTeX Warning: Label `Cartridge:using-the-mcs-code' multiply defined.


LaTeX Warning: Label `Cartridge:reference-guide' multiply defined.


LaTeX Warning: Label `Cartridge:new-types' multiply defined.


LaTeX Warning: Label `Cartridge:parameters' multiply defined.


LaTeX Warning: Label `Cartridge:operators' multiply defined.


LaTeX Warning: Label `Cartridge:similarity-search' multiply defined.


LaTeX Warning: Label `Cartridge:substructure-and-exact-structure-search' multip
ly defined.


LaTeX Warning: Label `Cartridge:molecule-comparison' multiply defined.


LaTeX Warning: Label `Cartridge:functions' multiply defined.


LaTeX Warning: Label `Cartridge:fingerprint-related' multiply defined.


LaTeX Warning: Label `Cartridge:generating-fingerprints' multiply defined.


LaTeX Warning: Label `Cartridge:working-with-fingerprints' multiply defined.


LaTeX Warning: Label `Cartridge:fingerprint-i-o' multiply defined.


LaTeX Warning: Label `Cartridge:molecule-related' multiply defined.


LaTeX Warning: Label `Cartridge:molecule-i-o-and-validation' multiply defined.


LaTeX Warning: Label `Cartridge:substructure-operations' multiply defined.


LaTeX Warning: Label `Cartridge:descriptors' multiply defined.


LaTeX Warning: Label `Cartridge:connectivity-descriptors' multiply defined.


LaTeX Warning: Label `Cartridge:mcs' multiply defined.


LaTeX Warning: Label `Cartridge:other' multiply defined.


LaTeX Warning: Label `Cartridge:using-the-cartridge-from-python' multiply defin
ed.


LaTeX Warning: Label `Cartridge:license' multiply defined.


LaTeX Warning: Label `BackwardsIncompatibleChanges:backwards-incompatible-chang
es' multiply defined.


LaTeX Warning: Label `BackwardsIncompatibleChanges:release-2019-09' multiply de
fined.


LaTeX Warning: Label `BackwardsIncompatibleChanges:updated-van-der-waals-radii'
 multiply defined.


LaTeX Warning: Label `BackwardsIncompatibleChanges:r-atoms-in-mol-blocks-are-no
w-converted-into-queries' multiply defined.


LaTeX Warning: Label `BackwardsIncompatibleChanges:pandastools-loadsdf-uses-iso
meric-smiles' multiply defined.


LaTeX Warning: Label `BackwardsIncompatibleChanges:new-fingerprinter-defaults-c
hanged' multiply defined.


LaTeX Warning: Label `BackwardsIncompatibleChanges:release-2019-03' multiply de
fined.


LaTeX Warning: Label `BackwardsIncompatibleChanges:release-2018-09' multiply de
fined.


LaTeX Warning: Label `BackwardsIncompatibleChanges:getatomsmiles-generates-isom
eric-smiles-by-default' multiply defined.


LaTeX Warning: Label `BackwardsIncompatibleChanges:changes-to-ringmatchesringon
ly-option-in-the-mcs-code' multiply defined.


LaTeX Warning: Label `BackwardsIncompatibleChanges:the-conformation-generation-
code-now-uses-etkdg-by-default-when-called-from-python' multiply defined.


LaTeX Warning: Label `BackwardsIncompatibleChanges:release-2018-03' multiply de
fined.


LaTeX Warning: Label `BackwardsIncompatibleChanges:moltosmiles-generates-isomer
ic-smiles-by-default' multiply defined.


LaTeX Warning: Label `BackwardsIncompatibleChanges:moltomolblock-generates-a-2d
-conformation-when-the-includestereo-flag-is-set' multiply defined.


LaTeX Warning: Label `BackwardsIncompatibleChanges:the-conformation-generation-
code-now-uses-etkdg-by-default' multiply defined.


LaTeX Warning: Label `BackwardsIncompatibleChanges:license' multiply defined.

) (/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1ptm.fd)
(/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii
[Loading MPS to PDF converter (version 2006.09.02).]
) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty
(/usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg))
*geometry* driver: auto-detecting
*geometry* detected driver: pdftex
(/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty
(/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty)
(/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty))
(./RDKit.out) (./RDKit.out)
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1phv.fd)<<ot1.cmap>><<oml.cmap
>><<oms.cmap>><<omx.cmap>>
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd)
(/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [1{/var/lib/texmf/fo
nts/map/pdftex/updmap/pdftex.map}] [2] (./RDKit.toc [1] [2] [3] [4]
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/t1pcr.fd)) [5] [6]
Chapter 1.
(/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1ptm.fd)
Underfull \hbox (badness 10000) in paragraph at lines 122--123
[]\T1/ptm/m/n/10 Cheminformatics nodes for KN-IME (dis-tributed from the KN-IME
 com-mu-nity site:
[1]

LaTeX Warning: Hyper reference `Overview:footnote1' on page 2 undefined on inpu
t line 216.

[2] [3] [4]
Chapter 2.
[5] [6] (/usr/share/texlive/texmf-dist/tex/latex/psnfss/ts1pcr.fd) [7] [8]
[9] [10]
Underfull \hbox (badness 10000) in paragraph at lines 742--743
[]\T1/ptm/m/n/10 You can en-able sup-port for the Avalon toolkit by adding the 
ar-gu-ment
[11]

Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 811.

(/usr/share/texlive/texmf-dist/tex/latex/base/t1cmtt.fd)
(/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmtt.fd)
Underfull \hbox (badness 10000) in paragraph at lines 840--841
[]\T1/ptm/m/n/10 Add \T1/pcr/m/n/10 #define BOOST_PYTHON_NO_PY_SIGNATURES \T1/p
tm/m/n/10 at the top of \T1/pcr/m/n/10 Code/GraphMol/Wrap/
[12] [13] [14]
Underfull \hbox (badness 10000) in paragraph at lines 1023--1024
[]\T1/ptm/m/n/10 Run cmake. Here's an ex-am-ple ba-sic com-mand line for 64bit 
win-dows that will

Underfull \hbox (badness 10000) in paragraph at lines 1023--1024
\T1/ptm/m/n/10 down-load the InChI and Avalon toolkit sources from the InChI Tr
ust and Source-Forge

Underfull \hbox (badness 10000) in paragraph at lines 1023--1024
\T1/ptm/m/n/10 repos-i-to-ries, re-spec-tively, and build the Post-greSQL car-t
ridge for the in-stalled ver-sion

Underfull \hbox (badness 10000) in paragraph at lines 1023--1024
\T1/ptm/m/n/10 of Post-greSQL:\T1/pcr/m/n/10 cmake -DRDK_BUILD_PYTHON_WRAPPERS=
ON -DBOOST_ROOT=C:/

Underfull \hbox (badness 10000) in paragraph at lines 1023--1024
\T1/pcr/m/n/10 boost -DRDK_BUILD_INCHI_SUPPORT=ON -DRDK_BUILD_AVALON_SUPPORT=ON


Underfull \hbox (badness 10000) in paragraph at lines 1023--1024
\T1/pcr/m/n/10 -DRDK_BUILD_PGSQL=ON -DPostgreSQL_ROOT="C:\Program Files\Postgre
SQL\9.5"

Underfull \hbox (badness 10000) in paragraph at lines 1032--1033
[]\T1/pcr/m/n/10 "C:\Program Files\PostgreSQL\9.5\bin\pg_ctl.exe" -N "postgresq
l-9.5"

Underfull \hbox (badness 10000) in paragraph at lines 1038--1039
[]\T1/pcr/m/n/10 "C:\Program Files\PostgreSQL\9.5\bin\pg_ctl.exe" -N "postgresq
l-9.5"
[15] [16]
Chapter 3.
[17]
Underfull \hbox (badness 10000) in paragraph at lines 1135--1136
[]\T1/ptm/m/n/10 displays a mes-sage like: \T1/pcr/m/n/10 [12:18:01] Explicit v
alence for atom # 1 O greater than
[18] [19] [20] [21] [22] [23] [24] [25]
Underfull \hbox (badness 10000) in paragraph at lines 1662--1664
[]\T1/ptm/m/n/10 Another op-tion for Com-pute2DCoords al-lows you to gen-er-ate
 2D de-pic-tions for molecules that

Underfull \hbox (badness 7649) in paragraph at lines 1662--1664
\T1/ptm/m/n/10 closely mimic 3D con-for-ma-tions. This is avail-able us-ing the
 func-tion \T1/pcr/m/n/10 rdkit.Chem.AllChem.

Underfull \hbox (badness 10000) in paragraph at lines 1682--1687
[]\T1/ptm/m/n/10 More fine-grained con-trol can be ob-tained us-ing the core fu
nc-tion \T1/pcr/m/n/10 rdkit.Chem.rdDepictor.
[26 <./picture_1.png (PNG copy)> <./picture_0.png (PNG copy)> <./picture_3.png 
(PNG copy)> <./picture_2.png> <./picture_4.png>] [27] [28] [29 <./cdk2_mol1.png
> <./cdk2_mol2.png>] [30 <./cdk2_molgrid.png>] [31 <./cdk2_molgrid_aligned.png 
(PNG copy)>] [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] [42 <./mfp2_bit8
72.png> <./rdk_bit1553.png>] [43 <./rdk_bit1553_2.png>] [44] [45 <./similarity_
map_fp1.png>] [46 <./similarity_map_fp2.png>] [47 <./similarity_map_fp3.png>]
[48] [49 <./similarity_map_charges.png>] [50 <./similarity_map_crippen.png>]
[51] [52] [53] [54] [55] [56] [57] [58] [59]
Underfull \hbox (badness 6792) in paragraph at lines 3630--3633
[]\T1/ptm/m/n/10 Or we can use the bit rank-ing func-tion-al-ity from the \T1/p
cr/m/n/10 rdkit.ML.InfoTheory.rdInfoTheory.
[60] [61] [62] [63 <./picture_6.png>] [64]
Underfull \hbox (badness 10000) in paragraph at lines 4010--4014
[]|\T1/ptm/m/n/10 Wildman and Crip-pen \T1/ptm/m/it/10 JCICS

Underfull \hbox (badness 10000) in paragraph at lines 4020--4024
[]|\T1/ptm/m/n/10 Wildman and Crip-pen \T1/ptm/m/it/10 JCICS

Overfull \hbox (26.64615pt too wide) in paragraph at lines 4088--4089
[]|\T1/ptm/m/n/10 Num{Aromatic,Saturated,Aliphatic}Rings| 

Overfull \hbox (91.89552pt too wide) in paragraph at lines 4093--4094
[]|\T1/ptm/m/n/10 Num{Aromatic,Saturated,Aliphatic}{Hetero,Carbo}cycles| 

Underfull \hbox (badness 10000) in paragraph at lines 4122--4125
[]|\T1/ptm/m/n/10 Number of bridge-head atoms

Underfull \hbox (badness 10000) in paragraph at lines 4150--4153
\T1/ptm/m/n/10 tions [][]$http : / / www . chemcomp . com /

Underfull \hbox (badness 10000) in paragraph at lines 4159--4163
\T1/ptm/m/n/10 tri-bu-tions [][]$http : / / www . chemcomp .

Underfull \hbox (badness 10000) in paragraph at lines 4169--4173
\T1/ptm/m/n/10 tri-bu-tions [][]$http : / / www . chemcomp .

Underfull \hbox (badness 10000) in paragraph at lines 4205--4208
[]|\T1/ptm/m/n/10 implemented us-ing a set of

Underfull \hbox (badness 10000) in paragraph at lines 4205--4208
\T1/ptm/m/n/10 SMARTS def-i-ni-tions in $(RD-

Overfull \hbox (9.18636pt too wide) in paragraph at lines 4205--4208
\T1/ptm/m/n/10 BASE)/Data/FragmentDescriptors.csv| 

Underfull \hbox (badness 7273) in paragraph at lines 4214--4217
\T1/ptm/m/n/10 and Con-soni ^^PDe-scrip-tors from

Underfull \hbox (badness 10000) in paragraph at lines 4214--4217
\T1/ptm/m/n/10 Chemoin-for-mat-ics [][]$https : / / doi . org /
[65] [66]
Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 De-scrip-

Overfull \hbox (19.3687pt too wide) in paragraph at lines 4364--4364
\T1/ptm/m/n/10 tor/Descriptor

Overfull \hbox (3.88354pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 Lan-

Overfull \hbox (8.88354pt too wide) in paragraph at lines 4364--4364
\T1/ptm/m/n/10 guage| 

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
\T1/ptm/m/n/10 best fit

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 PMI1,

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
\T1/ptm/m/n/10 PMI2,

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 NPR1,

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 Ra-

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
\T1/ptm/m/n/10 dius of

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 In-er-tial

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
\T1/ptm/m/n/10 shape

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 Ec-cen-

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 As-

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 Sphe-

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
\T1/ptm/m/n/10 roc-ity

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 Au-to-

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 

Underfull \hbox (badness 10000) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 GET-

Overfull \hbox (2.95337pt too wide) in paragraph at lines 4364--4364
[]\T1/ptm/m/n/10 C++| 
[67]
Underfull \hbox (badness 10000) in paragraph at lines 4444--4444
[]\T1/ptm/m/n/10 Fin-ger-print

Underfull \hbox (badness 10000) in paragraph at lines 4444--4444
[]\T1/ptm/m/n/10 Lan-

Overfull \hbox (2.77637pt too wide) in paragraph at lines 4444--4444
\T1/ptm/m/n/10 guage| 

Underfull \hbox (badness 10000) in paragraph at lines 4444--4444
[]\T1/ptm/m/n/10 Topo-log-i-cal

Underfull \hbox (badness 10000) in paragraph at lines 4444--4444
[]\T1/ptm/m/n/10 Mor-

Underfull \hbox (badness 10000) in paragraph at lines 4444--4444
[]\T1/ptm/m/n/10 2D Phar-ma-

Overfull \hbox (0.97221pt too wide) in paragraph at lines 4494--4494
[]\T1/ptm/m/n/10 Fea-

Overfull \hbox (8.75237pt too wide) in paragraph at lines 4494--4494
[]\T1/ptm/m/n/10 Donor| 

Underfull \hbox (badness 10000) in paragraph at lines 4494--4494
[]\T1/ptm/m/n/10 Ac-

Underfull \hbox (badness 10000) in paragraph at lines 4494--4494
[]\T1/pcr/m/n/10 [$([O,S;H1;v2;!$(*-*=[O,N,P,S])]),$([O,S;H0;v2]),$([O,S;-]),$(
[N;v3;!

Overfull \hbox (2.08232pt too wide) in paragraph at lines 4494--4494
[]\T1/ptm/m/n/10 Aro-

Overfull \hbox (5.422pt too wide) in paragraph at lines 4494--4494
\T1/ptm/m/n/10 matic| 

Overfull \hbox (5.9722pt too wide) in paragraph at lines 4494--4494
[]\T1/ptm/m/n/10 Halo-

Underfull \hbox (badness 10000) in paragraph at lines 4494--4494
[]\T1/ptm/m/n/10 Ba-

Underfull \hbox (badness 10000) in paragraph at lines 4494--4494
[]\T1/pcr/m/n/10 [#7;+,$([N;H2&+0][$([C,a]);!$([C,a](=O))]),$([N;H1&+0]([$([C,a
]);!

Underfull \hbox (badness 10000) in paragraph at lines 4494--4494
\T1/pcr/m/n/10 $([C,a](=O))])[$([C,a]);!$([C,a](=O))]),$([N;H0&+0]([C;!$(C(=O))
])([C;!

Overfull \hbox (9.86208pt too wide) in paragraph at lines 4494--4494
[]\T1/ptm/m/n/10 Acidic| 
[68 <./picture_5.png (PNG copy)>] [69] [70]
Chapter 4.
[71 <./picture_9.png (PNG copy)>] [72 <./picture_8.png> <./picture_7.png (PNG c
opy)>] [73 <./picture_10.png> <./picture_12.png>] [74 <./picture_11.png>]
[75] [76] [77] [78] [79] [80] [81] [82] [83] [84] [85] [86 <./picture_10.jpg>]
[87] [88]
Underfull \hbox (badness 10000) in paragraph at lines 6147--6147
[]\T1/ptm/m/n/10 _Chi-ral-i-ty-Pos-si-

Underfull \hbox (badness 10000) in paragraph at lines 6147--6147
[]\T1/ptm/m/n/10 _Re-ac-tion-De-

Underfull \hbox (badness 10000) in paragraph at lines 6147--6147
[]\T1/ptm/m/n/10 mo-lAtomMap-

Underfull \hbox (badness 10000) in paragraph at lines 6147--6147
[]\T1/ptm/m/n/10 molFileIn-ver-

Underfull \hbox (badness 10000) in paragraph at lines 6147--6147
[]\T1/ptm/m/n/10 mol-Rxn-Com-po-
[89] [90]
Underfull \hbox (badness 10000) in paragraph at lines 6286--6290
[]\T1/ptm/m/n/10 By de-fault the \T1/pcr/m/n/10 rdkit.Chem.rdmolfiles.SDMolSupp
lier \T1/ptm/m/n/10 and \T1/pcr/m/n/10 rdkit.Chem.rdmolfiles.

Underfull \hbox (badness 6559) in paragraph at lines 6286--6290
\T1/pcr/m/n/10 ForwardSDMolSupplier \T1/ptm/m/n/10 classes (\T1/pcr/m/n/10 RDKi
t::SDMolSupplier \T1/ptm/m/n/10 and \T1/pcr/m/n/10 RDKit::ForwardMolSupplier
[91]
Underfull \hbox (badness 10000) in paragraph at lines 6335--6338
[]\T1/ptm/m/n/10 If you have atom prop-er-ties that you would like to have writ
-ten to SDF files, you can

Underfull \hbox (badness 10000) in paragraph at lines 6335--6338
\T1/ptm/m/n/10 use the func-tions \T1/pcr/m/n/10 rdkit.Chem.rdmolfiles.CreateAt
omStringPropertyList()\T1/ptm/m/n/10 ,

Underfull \hbox (badness 10000) in paragraph at lines 6335--6338
\T1/pcr/m/n/10 rdkit.Chem.rdmolfiles.CreateAtomIntPropertyList()\T1/ptm/m/n/10 
, \T1/pcr/m/n/10 rdkit.Chem.

Underfull \hbox (badness 10000) in paragraph at lines 6335--6338
\T1/pcr/m/n/10 rdmolfiles.CreateAtomDoublePropertyList()\T1/ptm/m/n/10 , or \T1
/pcr/m/n/10 rdkit.Chem.rdmolfiles.
[92]
Underfull \hbox (badness 10000) in paragraph at lines 6446--6446
[]\T1/phv/m/n/10 Mix-

Underfull \hbox (badness 10000) in paragraph at lines 6446--6446
[]\T1/ptm/m/n/10 mix-

Underfull \hbox (badness 10000) in paragraph at lines 6446--6446
[]\T1/ptm/m/n/10 mix-

Underfull \hbox (badness 10000) in paragraph at lines 6446--6446
[]\T1/ptm/m/n/10 mix-

Underfull \hbox (badness 10000) in paragraph at lines 6446--6446
[]\T1/ptm/m/n/10 mix-
[93] [94 <./enhanced_stereo_and1_and2_base.png> <./enhanced_stereo_and1_and2_ex
pand.png> <./enhanced_stereo_and1_cis_base.png> <./enhanced_stereo_and1_cis_exp
and.png> <./enhanced_stereo_and1_trans_base.png> <./enhanced_stereo_and1_trans_
expand.png> <./enhanced_stereo_or1_or2_base.png> <./enhanced_stereo_or1_cis_bas
e.png> <./enhanced_stereo_or1_trans_base.png> <./enhanced_stereo_abs_and_base.p
ng> <./enhanced_stereo_abs_and_expand.png> <./enhanced_stereo_abs_or_base.png>]

Underfull \hbox (badness 7558) in paragraph at lines 6461--6463
[]\T1/ptm/m/n/10 It is pos-si-ble to enu-mer-ate the el-e-ments of a \T1/pcr/m/
n/10 StereoGroup \T1/ptm/m/n/10 us-ing the func-tion \T1/pcr/m/n/10 rdkit.Chem.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Package textcomp Warning: Symbol \textasciigrave not provided by
(textcomp)                font family pcr in TS1 encoding.
(textcomp)                Default family used instead on input line 1.


Underfull \hbox (badness 10000) in paragraph at lines 6475--6476
[]\T1/ptm/m/n/10 Reactions also pre-serve \T1/pcr/m/n/10 StereoGroup\TS1/cmtt/m
/n/10 ``\T1/pcr/m/n/10 s. Product atoms are included in the
[95] [96] [97] [98]
Chapter 5.
[99] [100 <./indole1.png>] [101] [102] [103] [104] [105] [106] [107] [108]
Underfull \hbox (badness 10000) in paragraph at lines 7184--7185
[]\T1/ptm/m/n/10 IPython note-book: [][]$http : / / nbviewer . ipython . org / 
gist / greglandrum / 8351725$[][] [][]$https : / / gist . github . com / gregla
ndrum /
[109 <./similarity_map_rf.png>] [110] [111] [112] [113] [114]
Chapter 6.
[115] [116] [117] [118]
Overfull \hbox (1096.24321pt too wide) in paragraph at lines 7685--7685
[]\T1/pcr/m/n/9 CC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)[C[]@[][]\T1/pcr/b/n/
9 @H[]\T1/pcr/m/n/9 ][]1[]NC([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][
]2[]CCCN2C([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCCN2C([]=[]O)
[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ]([C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 
](C)CC)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CO)NC([]=[]O)[C[]\T1/pcr
/b/n/9 @H[]\T1/pcr/m/n/9 ](C)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ]([C
[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)O)NC([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T
1/pcr/m/n/9 ][]2[]CSSC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](NC1[]=[]O)C([]=[]O)
N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc1cnc[nH][]1[])C([]=[]O)N[C[]\T1/p
cr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc1ccccc1)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1
/pcr/m/n/9 ](CCCNC([]=[]N)N)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 
](Cc1c[nH]c3ccccc13)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CCCNC(
[]=[]N)N)C([]=[]O)N2|  

Overfull \hbox (167.44426pt too wide) in paragraph at lines 7687--7687
[]\T1/pcr/m/n/9 CN1C([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CCCNC([]=[]N)
N)NC([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2ccc(O)cc2)NC([]=[]O)[
C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCCN2C([]=[]O)[C[]\T1/pcr/b/n/9 @
H[]\T1/pcr/m/n/9 ](Cc2ccc3ccccc3c2)NC([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr
/m/n/9 ][]1[]CC([]=[]O)O|  

Overfull \hbox (113.44432pt too wide) in paragraph at lines 7688--7688
[]\T1/pcr/m/n/9 NCCCC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](NC([]=[]O)[C[]\T1/pc
r/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc1ccc(OP([]=[]O)(O)O)cc1)NC([]=[]O)Cc1ccccc1)C([]=
[]O)N1CCC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]1[]C([]=[]O)N[C[]@[][]\T1/pcr/b
/n/9 @H[]\T1/pcr/m/n/9 ](Cc1ccccc1)C(N)[]=[]O|  

Overfull \hbox (675.04369pt too wide) in paragraph at lines 7689--7689
[]\T1/pcr/m/n/9 CCCCCCCCCCCCCCCCNC([]=[]O)CN(CC([]=[]O)NC(C)(C)C([]=[]O)N[C[]@[
][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc1ccccc1)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9
 @H[]\T1/pcr/m/n/9 ](CC(C)C)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 
](Cc1ccccc1)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CCCNC([]=[]N)N
)C([]=[]O)N1CCC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]1[]C([]=[]O)N[C[]@[][]\T1
/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CCCNC([]=[]N)N)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 
@H[]\T1/pcr/m/n/9 ](CC(N)[]=[]O)C(N)[]=[]O)C([]=[]O)c1cccnc1|  

Overfull \hbox (491.4439pt too wide) in paragraph at lines 7690--7690
[]\T1/pcr/m/n/9 CCCCCCCCCCCCCCCCN(CCCCCCCCCCCCCCCC)CCCCCC([]=[]O)NC(C)(C)C([]=[
]O)NC(Cc1ccccc1)C([]=[]O)NC(CC(C)C)C([]=[]O)NC(Cc1ccccc1)C([]=[]O)NC(CCCNC([]=[
]N)N)C([]=[]O)N1CCCC1C([]=[]O)NC(CCCNC([]=[]N)N)C([]=[]O)NC(CC(N)[]=[]O)C(N)[]=
[]O|  

Overfull \hbox (383.44402pt too wide) in paragraph at lines 7691--7691
[]\T1/pcr/m/n/9 CC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)[C[]@[][]\T1/pcr/b/n/
9 @H[]\T1/pcr/m/n/9 ][]1[]NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2cc
ccc2)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)NC([]=[]O)[C[]@[][]
\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCCN2C([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/p
cr/m/n/9 ](Cc2ccccc2)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C(C)C)NC([
]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)NC([]=[]O)[C[]\T1/pcr/b/n/9 
@H[]\T1/pcr/m/n/9 ](CCSC)NC1[]=[]O|  

Overfull \hbox (394.244pt too wide) in paragraph at lines 7692--7692
[]\T1/pcr/m/n/9 CC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)[C[]@[][]\T1/pcr/b/n/
9 @H[]\T1/pcr/m/n/9 ][]1[]NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2cc
ccc2)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)NC([]=[]O)[C[]@[][]
\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCCN2C([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/p
cr/m/n/9 ](Cc2ccccc2)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C(C)C)NC([
]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)NC([]=[]O)[C[]\T1/pcr/b/n/9 
@H[]\T1/pcr/m/n/9 ](CC[S[]+[]](C)[O[]- 

Overfull \hbox (448.24394pt too wide) in paragraph at lines 7693--7693
[]\T1/pcr/m/n/9 CC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)[C[]@[][]\T1/pcr/b/n/
9 @H[]\T1/pcr/m/n/9 ][]1[]NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2c[
nH]c3ccccc23)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2ccccc2)NC([]=[]
O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2ccccc2)NC([]=[]O)[C[]@[][]\T1/pcr/b/
n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCCN2C([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ]
(CCSC)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)NC([]=[]O)[C[]\T1/
pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC[S[]+[]](C)[O[]- 

Overfull \hbox (270.04414pt too wide) in paragraph at lines 7694--7694
[][]\T1/pcr/m/n/9 ])NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C(C)C)NC([]
=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2c[nH]c3ccccc23)NC([]=[]O)[C[]\T1/
pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2ccccc2)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr
/m/n/9 ](Cc2ccccc2)NC([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCC
N2C([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC[S[]+[]](C)[O[]- 
[119]
Overfull \hbox (1096.24321pt too wide) in paragraph at lines 7707--7707
[]\T1/pcr/m/n/9 CC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)[C[]@[][]\T1/pcr/b/n/
9 @H[]\T1/pcr/m/n/9 ][]1[]NC([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][
]2[]CCCN2C([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCCN2C([]=[]O)
[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ]([C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 
](C)CC)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CO)NC([]=[]O)[C[]\T1/pcr
/b/n/9 @H[]\T1/pcr/m/n/9 ](C)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ]([C
[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)O)NC([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T
1/pcr/m/n/9 ][]2[]CSSC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](NC1[]=[]O)C([]=[]O)
N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc1cnc[nH][]1[])C([]=[]O)N[C[]\T1/p
cr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc1ccccc1)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1
/pcr/m/n/9 ](CCCNC([]=[]N)N)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 
](Cc1c[nH]c3ccccc13)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CCCNC(
[]=[]N)N)C([]=[]O)N2|  

Overfull \hbox (167.44426pt too wide) in paragraph at lines 7709--7709
[]\T1/pcr/m/n/9 CN1C([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CCCNC([]=[]N)
N)NC([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2ccc(O)cc2)NC([]=[]O)[
C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCCN2C([]=[]O)[C[]\T1/pcr/b/n/9 @
H[]\T1/pcr/m/n/9 ](Cc2ccc3ccccc3c2)NC([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr
/m/n/9 ][]1[]CC([]=[]O)O|  

Overfull \hbox (113.44432pt too wide) in paragraph at lines 7710--7710
[]\T1/pcr/m/n/9 NCCCC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](NC([]=[]O)[C[]\T1/pc
r/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc1ccc(OP([]=[]O)(O)O)cc1)NC([]=[]O)Cc1ccccc1)C([]=
[]O)N1CCC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]1[]C([]=[]O)N[C[]@[][]\T1/pcr/b
/n/9 @H[]\T1/pcr/m/n/9 ](Cc1ccccc1)C(N)[]=[]O|  

Overfull \hbox (675.04369pt too wide) in paragraph at lines 7711--7711
[]\T1/pcr/m/n/9 CCCCCCCCCCCCCCCCNC([]=[]O)CN(CC([]=[]O)NC(C)(C)C([]=[]O)N[C[]@[
][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc1ccccc1)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9
 @H[]\T1/pcr/m/n/9 ](CC(C)C)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 
](Cc1ccccc1)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CCCNC([]=[]N)N
)C([]=[]O)N1CCC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]1[]C([]=[]O)N[C[]@[][]\T1
/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CCCNC([]=[]N)N)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 
@H[]\T1/pcr/m/n/9 ](CC(N)[]=[]O)C(N)[]=[]O)C([]=[]O)c1cccnc1|  

Overfull \hbox (383.44402pt too wide) in paragraph at lines 7712--7712
[]\T1/pcr/m/n/9 CC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)[C[]@[][]\T1/pcr/b/n/
9 @H[]\T1/pcr/m/n/9 ][]1[]NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2cc
ccc2)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)NC([]=[]O)[C[]@[][]
\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCCN2C([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/p
cr/m/n/9 ](Cc2ccccc2)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C(C)C)NC([
]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)NC([]=[]O)[C[]\T1/pcr/b/n/9 
@H[]\T1/pcr/m/n/9 ](CCSC)NC1[]=[]O|  

Overfull \hbox (394.244pt too wide) in paragraph at lines 7713--7713
[]\T1/pcr/m/n/9 CC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)[C[]@[][]\T1/pcr/b/n/
9 @H[]\T1/pcr/m/n/9 ][]1[]NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2cc
ccc2)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)NC([]=[]O)[C[]@[][]
\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCCN2C([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/p
cr/m/n/9 ](Cc2ccccc2)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C(C)C)NC([
]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)NC([]=[]O)[C[]\T1/pcr/b/n/9 
@H[]\T1/pcr/m/n/9 ](CC[S[]+[]](C)[O[]- 

Overfull \hbox (448.24394pt too wide) in paragraph at lines 7714--7714
[]\T1/pcr/m/n/9 CC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)[C[]@[][]\T1/pcr/b/n/
9 @H[]\T1/pcr/m/n/9 ][]1[]NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2c[
nH]c3ccccc23)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2ccccc2)NC([]=[]
O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2ccccc2)NC([]=[]O)[C[]@[][]\T1/pcr/b/
n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCCN2C([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ]
(CCSC)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)NC([]=[]O)[C[]\T1/
pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC[S[]+[]](C)[O[]- 

Overfull \hbox (270.04414pt too wide) in paragraph at lines 7715--7715
[][]\T1/pcr/m/n/9 ])NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C(C)C)NC([]
=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2c[nH]c3ccccc23)NC([]=[]O)[C[]\T1/
pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2ccccc2)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr
/m/n/9 ](Cc2ccccc2)NC([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCC
N2C([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC[S[]+[]](C)[O[]- 

Overfull \hbox (550.84383pt too wide) in paragraph at lines 7716--7716
[]\T1/pcr/m/n/9 CC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)[C[]\T1/pcr/b/n/9 @H[
]\T1/pcr/m/n/9 ](N)C([]=[]O)N[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C([]=[]O)N[C
[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)C([]=[]O)N[C[]\T1/pcr/b/n/9 @H[
]\T1/pcr/m/n/9 ](C([]=[]O)N1CCC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]1[]C([]=[
]O)N1CCC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]1[]C([]=[]O)N[C[]\T1/pcr/b/n/9 @
H[]\T1/pcr/m/n/9 ](CCC([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CCC([
]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)C([]=[]O)O)Cc1ccccc1)C
c1ccccc1)C(C)C)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)CC|  
[120] [121] [122]
Overfull \vbox (1.18257pt too high) detected at line 7924
[123] [124] [125] [126] [127] [128] [129] [130] [131] [132]
Chapter 7.
[133] [134] [135] [136]
Chapter 8.
[137] [138] [139] [140] [141] [142] [143] [144] [145] [146] [147] [148]
[149] [150] [151] [152] [153] [154]
Chapter 9.
[155] [156]
Chapter 10.
(./RDKit.ind) [157] (./RDKit.aux)

LaTeX Warning: There were undefined references.


LaTeX Warning: There were multiply-defined labels.

 )
(see the transcript file for additional information) </tmp/texfonts/pk/ljfour/j
knappen/ec/tctt1000.600pk>{/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8
r.enc} </tmp/texfonts/pk/ljfour/jknappen/ec/tctt0900.600pk></usr/share/texlive/
texmf-dist/fonts/type1/public/amsfonts/cm/cmmi5.pfb></usr/share/texlive/texmf-d
ist/fonts/type1/public/amsfonts/cm/cmsy5.pfb></usr/share/texlive/texmf-dist/fon
ts/type1/urw/courier/ucrb8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/
courier/ucrr8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/courier/ucrro
8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvb8a.pfb></usr
/share/texlive/texmf-dist/fonts/type1/urw/helvetic/uhvbo8a.pfb></usr/share/texl
ive/texmf-dist/fonts/type1/urw/helvetic/uhvr8a.pfb></usr/share/texlive/texmf-di
st/fonts/type1/urw/times/utmb8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/
urw/times/utmr8a.pfb></usr/share/texlive/texmf-dist/fonts/type1/urw/times/utmri
8a.pfb>
Output written on RDKit.pdf (165 pages, 1682595 bytes).
Transcript written on RDKit.log.
Latexmk: Index file 'RDKit.idx' was written
Latexmk: Log file says output to 'RDKit.pdf'
Latexmk: List of undefined refs and citations:
  Label `BackwardsIncompatibleChanges:backwards-incompatible-changes' multiply defined
  Label `BackwardsIncompatibleChanges:changes-to-ringmatchesringonly-option-in-the-mcs-code' multiply defined
  Label `BackwardsIncompatibleChanges:getatomsmiles-generates-isomeric-smiles-by-default' multiply defined
  Label `BackwardsIncompatibleChanges:license' multiply defined
  Label `BackwardsIncompatibleChanges:moltomolblock-generates-a-2d-conformation-when-the-includestereo-flag-is-set' multiply defined
  Label `BackwardsIncompatibleChanges:moltosmiles-generates-isomeric-smiles-by-default' multiply defined
  Label `BackwardsIncompatibleChanges:new-fingerprinter-defaults-changed' multiply defined
  Label `BackwardsIncompatibleChanges:pandastools-loadsdf-uses-isomeric-smiles' multiply defined
  Label `BackwardsIncompatibleChanges:r-atoms-in-mol-blocks-are-now-converted-into-queries' multiply defined
  Label `BackwardsIncompatibleChanges:release-2018-03' multiply defined
  Label `BackwardsIncompatibleChanges:release-2018-09' multiply defined
  Label `BackwardsIncompatibleChanges:release-2019-03' multiply defined
  Label `BackwardsIncompatibleChanges:release-2019-09' multiply defined
  Label `BackwardsIncompatibleChanges:the-conformation-generation-code-now-uses-etkdg-by-default' multiply defined
  Label `BackwardsIncompatibleChanges:the-conformation-generation-code-now-uses-etkdg-by-default-when-called-from-python' multiply defined
  Label `BackwardsIncompatibleChanges:updated-van-der-waals-radii' multiply defined
  Label `Cartridge:adjusting-the-similarity-cutoff' multiply defined
  Label `Cartridge:configuration' multiply defined
  Label `Cartridge:connectivity-descriptors' multiply defined
  Label `Cartridge:creating-a-database-from-a-file' multiply defined
  Label `Cartridge:creating-databases' multiply defined
  Label `Cartridge:descriptors' multiply defined
  Label `Cartridge:fingerprint-i-o' multiply defined
  Label `Cartridge:fingerprint-related' multiply defined
  Label `Cartridge:functions' multiply defined
  Label `Cartridge:generating-fingerprints' multiply defined
  Label `Cartridge:introduction' multiply defined
  Label `Cartridge:license' multiply defined
  Label `Cartridge:loading-chembl' multiply defined
  Label `Cartridge:mcs' multiply defined
  Label `Cartridge:molecule-comparison' multiply defined
  Label `Cartridge:molecule-i-o-and-validation' multiply defined
  Label `Cartridge:molecule-related' multiply defined
  Label `Cartridge:new-types' multiply defined
  Label `Cartridge:operators' multiply defined
  Label `Cartridge:other' multiply defined
  Label `Cartridge:parameters' multiply defined
  Label `Cartridge:reference-guide' multiply defined
  Label `Cartridge:similarity-search' multiply defined
  Label `Cartridge:similarity-searches' multiply defined
  Label `Cartridge:smarts-based-queries' multiply defined
  Label `Cartridge:substructure-and-exact-structure-search' multiply defined
  Label `Cartridge:substructure-operations' multiply defined
  Label `Cartridge:substructure-searches' multiply defined
  Label `Cartridge:the-rdkit-database-cartridge' multiply defined
  Label `Cartridge:tuning-queries' multiply defined
  Label `Cartridge:tutorial' multiply defined
  Label `Cartridge:using-stereochemistry' multiply defined
  Label `Cartridge:using-the-cartridge-from-python' multiply defined
  Label `Cartridge:using-the-mcs-code' multiply defined
  Label `Cartridge:what-is-this' multiply defined
  Label `Cartridge:working-with-fingerprints' multiply defined
  Label `Cookbook:cleaning-up-heterocycles' multiply defined
  Label `Cookbook:clustering-molecules' multiply defined
  Label `Cookbook:d-functionality-in-the-rdkit' multiply defined
  Label `Cookbook:details' multiply defined
  Label `Cookbook:introduction' multiply defined
  Label `Cookbook:license' multiply defined
  Label `Cookbook:manipulating-molecules' multiply defined
  Label `Cookbook:miscellaneous-topics' multiply defined
  Label `Cookbook:neutralizing-charged-molecules' multiply defined
  Label `Cookbook:parallel-conformation-generation' multiply defined
  Label `Cookbook:rdkit-cookbook' multiply defined
  Label `Cookbook:rmsd-calculation-between-n-molecules' multiply defined
  Label `Cookbook:using-a-different-aromaticity-model' multiply defined
  Label `Cookbook:using-custom-mcs-atom-types' multiply defined
  Label `Cookbook:using-scikit-learn-with-rdkit' multiply defined
  Label `Cookbook:what-is-this' multiply defined
  Label `Install:advanced' multiply defined
  Label `Install:building-from-source' multiply defined
  Label `Install:building-from-the-command-line-recommended' multiply defined
  Label `Install:building-the-java-wrappers' multiply defined
  Label `Install:building-the-rdkit' multiply defined
  Label `Install:conda-forge-package' multiply defined
  Label `Install:cross-platform-under-anaconda-python-fastest-install' multiply defined
  Label `Install:disabling-the-python-wrappers' multiply defined
  Label `Install:extra-software-to-install' multiply defined
  Label `Install:fedora-centos-and-rhel' multiply defined
  Label `Install:frequently-encountered-problems' multiply defined
  Label `Install:how-to-build-from-source-with-conda' multiply defined
  Label `Install:how-to-get-conda' multiply defined
  Label `Install:how-to-install-rdkit-with-conda' multiply defined
  Label `Install:installation' multiply defined
  Label `Install:installation-from-repositories' multiply defined
  Label `Install:installation-from-source' multiply defined
  Label `Install:installation-of-rdkit-binaries' multiply defined
  Label `Install:installing-and-using-postgresql-and-the-rdkit-postgresql-cartridge-from-a-conda-environment' multiply defined
  Label `Install:installing-boost' multiply defined
  Label `Install:installing-prerequisites-from-source' multiply defined
  Label `Install:introduction-to-anaconda' multiply defined
  Label `Install:license' multiply defined
  Label `Install:linux-and-os-x' multiply defined
  Label `Install:linux-x86-64-python-3-environment' multiply defined
  Label `Install:macos-10-12-sierra-python-3-environment' multiply defined
  Label `Install:optional-packages' multiply defined
  Label `Install:os-x' multiply defined
  Label `Install:prerequisites' multiply defined
  Label `Install:recommended-extras' multiply defined
  Label `Install:setup-and-preparation' multiply defined
  Label `Install:specifying-an-alternate-boost-installation' multiply defined
  Label `Install:specifying-an-alternate-python-installation' multiply defined
  Label `Install:specifying-install-location' multiply defined
  Label `Install:testing-the-build-optional-but-recommended' multiply defined
  Label `Install:ubuntu-12-04-and-later' multiply defined
  Label `Install:windows' multiply defined
  Label `Overview:an-overview-of-the-rdkit' multiply defined
  Label `Overview:footnotes' multiply defined
  Label `Overview:history' multiply defined
  Label `Overview:integration-with-other-open-source-projects' multiply defined
  Label `Overview:license' multiply defined
  Label `Overview:open-source-toolkit-for-cheminformatics' multiply defined
  Label `Overview:operational' multiply defined
  Label `Overview:the-contrib-directory' multiply defined
  Label `Overview:usage-by-other-open-source-projects' multiply defined
  Label `Overview:what-is-it' multiply defined
Latexmk: Summary of warnings from last run of (pdf)latex:
  Latex found 121 multiply defined reference(s)
=== TeX engine is 'pdfTeX'
Latexmk: All targets (RDKit.pdf) are up-to-date
make[3]: Leaving directory '/<<PKGBUILDDIR>>/Docs/Book/_build/latex'
pdflatex finished; the PDF files are in _build/latex.
make[2]: Leaving directory '/<<PKGBUILDDIR>>/Docs/Book'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   debian/rules override_dh_auto_test
make[1]: Entering directory '/<<PKGBUILDDIR>>'
cp -r rdkit obj-*/
find /<<PKGBUILDDIR>> -name rdchem.so
/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/rdkit/Chem/rdchem.so
#export RDBASE=/<<PKGBUILDDIR>> PYTHONPATH=/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ LD_LIBRARY_PATH="/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf//lib:"
PYTHONPATH=/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/:/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf//rdkit/Chem/ LD_LIBRARY_PATH="/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf//lib:" dh_auto_test
dh_auto_test: warning: Compatibility levels before 10 are deprecated (level 9 in use)
	cd obj-arm-linux-gnueabihf && make -j4 test ARGS\+=-j4
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Running tests...
/usr/bin/ctest --force-new-ctest-process -j4
Test project /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf
        Start   1: testCoordGen
        Start   2: pyCoordGen
        Start   3: testDict
        Start   4: testRDValue
  1/158 Test   #4: testRDValue ............................   Passed    0.02 sec
        Start   5: testDataStructs
  2/158 Test   #5: testDataStructs ........................   Passed    0.04 sec
        Start   6: testFPB
  3/158 Test   #6: testFPB ................................   Passed    0.02 sec
        Start   7: testMultiFPB
  4/158 Test   #7: testMultiFPB ...........................   Passed    0.12 sec
        Start   8: pyBV
  5/158 Test   #2: pyCoordGen .............................***Exception: SegFault  1.31 sec

        Start   9: pyDiscreteValueVect
  6/158 Test   #1: testCoordGen ...........................   Passed    1.39 sec
        Start  10: pySparseIntVect
  7/158 Test   #9: pyDiscreteValueVect ....................   Passed    0.65 sec
        Start  11: pyFPB
  8/158 Test  #10: pySparseIntVect ........................   Passed    0.86 sec
        Start  12: testTransforms
  9/158 Test  #12: testTransforms .........................   Passed    0.02 sec
        Start  13: testGrid
 10/158 Test  #13: testGrid ...............................   Passed    0.13 sec
        Start  14: geometryTestsCatch
 11/158 Test  #14: geometryTestsCatch .....................   Passed    0.01 sec
        Start  15: testPyGeometry
 12/158 Test   #8: pyBV ...................................   Passed    2.33 sec
        Start  16: testMatrices
 13/158 Test  #16: testMatrices ...........................   Passed    0.03 sec
        Start  17: testConrec
 14/158 Test  #11: pyFPB ..................................   Passed    0.71 sec
        Start  18: testAlignment
 15/158 Test  #18: testAlignment ..........................   Passed    0.02 sec
        Start  19: pyAlignment
 16/158 Test  #17: testConrec .............................   Passed    0.12 sec
        Start  20: testOptimizer
 17/158 Test  #20: testOptimizer ..........................   Passed    0.02 sec
        Start  21: testUFFForceField
 18/158 Test   #3: testDict ...............................   Passed    2.84 sec
        Start  22: testMMFFForceField
 19/158 Test  #21: testUFFForceField ......................   Passed    0.25 sec
        Start  23: pyForceFieldConstraints
 20/158 Test  #15: testPyGeometry .........................   Passed    0.89 sec
        Start  24: testDistGeom
 21/158 Test  #24: testDistGeom ...........................   Passed    0.02 sec
        Start  25: pyDistGeom
 22/158 Test  #19: pyAlignment ............................   Passed    0.76 sec
        Start  26: graphmolTest1
 23/158 Test  #25: pyDistGeom .............................   Passed    0.80 sec
        Start  27: graphmolcpTest
 24/158 Test  #23: pyForceFieldConstraints ................***Exception: SegFault  1.22 sec

        Start  28: graphmolqueryTest
 25/158 Test  #27: graphmolcpTest .........................   Passed    0.16 sec
        Start  29: graphmolMolOpsTest
 26/158 Test  #28: graphmolqueryTest ......................   Passed    0.10 sec
        Start  30: graphmoltestChirality
 27/158 Test  #30: graphmoltestChirality ..................   Passed    0.20 sec
        Start  31: graphmoltestPickler
 28/158 Test  #31: graphmoltestPickler ....................   Passed    0.90 sec
        Start  32: graphmoltestPicklerGlobalSetting
 29/158 Test  #32: graphmoltestPicklerGlobalSetting .......   Passed    0.11 sec
        Start  33: graphmolIterTest
 30/158 Test  #33: graphmolIterTest .......................   Passed    0.12 sec
        Start  34: hanoiTest
 31/158 Test  #29: graphmolMolOpsTest .....................   Passed    4.67 sec
        Start  35: graphmolMemTest1
 32/158 Test  #35: graphmolMemTest1 .......................   Passed    0.02 sec
        Start  36: resMolSupplierTest
 33/158 Test  #36: resMolSupplierTest .....................   Passed    3.09 sec
        Start  37: molBundleTest
 34/158 Test  #37: molBundleTest ..........................   Passed    0.09 sec
        Start  38: testSGroup
 35/158 Test  #38: testSGroup .............................   Passed    0.11 sec
        Start  39: test-valgrind
 36/158 Test  #39: test-valgrind ..........................   Passed    0.14 sec
        Start  40: graphmolTestsCatch
 37/158 Test  #40: graphmolTestsCatch .....................   Passed    0.20 sec
        Start  41: graphmolSGroupCatch
 38/158 Test  #41: graphmolSGroupCatch ....................   Passed    0.02 sec
        Start  42: testDepictor
 39/158 Test  #42: testDepictor ...........................   Passed    1.00 sec
        Start  43: pyDepictor
 40/158 Test  #43: pyDepictor .............................***Exception: SegFault  1.21 sec

        Start  44: smiTest1
 41/158 Test  #44: smiTest1 ...............................   Passed    0.68 sec
        Start  45: smiTest2
 42/158 Test  #45: smiTest2 ...............................   Passed    0.04 sec
        Start  46: cxsmilesTest
 43/158 Test  #46: cxsmilesTest ...........................   Passed    0.15 sec
        Start  47: smaTest1
 44/158 Test  #47: smaTest1 ...............................   Passed    0.83 sec
        Start  48: smiTestCatch
 45/158 Test  #48: smiTestCatch ...........................   Passed    0.13 sec
        Start  49: fileParsersTest1
 46/158 Test  #22: testMMFFForceField .....................   Passed   47.05 sec
        Start  50: testMolSupplier
 47/158 Test  #50: testMolSupplier ........................   Passed    0.81 sec
        Start  51: testMolWriter
 48/158 Test  #51: testMolWriter ..........................   Passed    0.77 sec
        Start  52: testTplParser
 49/158 Test  #52: testTplParser ..........................   Passed    0.12 sec
        Start  53: testMol2ToMol
 50/158 Test  #53: testMol2ToMol ..........................   Passed    0.13 sec
        Start  54: testSequence
 51/158 Test  #54: testSequence ...........................   Passed    0.14 sec
        Start  55: testExtendedStereoParsing
 52/158 Test  #55: testExtendedStereoParsing ..............   Passed    0.10 sec
        Start  56: fileParsersCatchTest
 53/158 Test  #56: fileParsersCatchTest ...................   Passed    0.12 sec
        Start  57: testPropertyLists
 54/158 Test  #57: testPropertyLists ......................   Passed    0.10 sec
        Start  58: testSubstructMatch
 55/158 Test  #58: testSubstructMatch .....................   Passed    1.18 sec
        Start  59: substructTestCatch
 56/158 Test  #59: substructTestCatch .....................   Passed    0.09 sec
        Start  60: testReaction
 57/158 Test  #60: testReaction ...........................   Passed    1.37 sec
        Start  61: testReactionFingerprints
 58/158 Test  #61: testReactionFingerprints ...............   Passed    0.12 sec
        Start  62: testEnumeration
 59/158 Test  #49: fileParsersTest1 .......................   Passed   44.41 sec
        Start  63: rxnTestCatch
 60/158 Test  #63: rxnTestCatch ...........................   Passed    0.29 sec
        Start  64: pyChemReactions
 61/158 Test  #64: pyChemReactions ........................***Exception: SegFault  1.12 sec

        Start  65: pyChemReactionEnumerations
 62/158 Test  #26: graphmolTest1 ..........................   Passed   59.97 sec
        Start  66: pyChemReactionSanitize
 63/158 Test  #65: pyChemReactionEnumerations .............***Exception: SegFault  1.04 sec

        Start  67: testChemTransforms
 64/158 Test  #67: testChemTransforms .....................   Passed    0.25 sec
        Start  68: chemTransformsTestCatch
 65/158 Test  #34: hanoiTest ..............................   Passed   58.23 sec
        Start  69: testSubgraphs1
 66/158 Test  #68: chemTransformsTestCatch ................   Passed    0.09 sec
        Start  70: testSubgraphs2
 67/158 Test  #70: testSubgraphs2 .........................   Passed    0.09 sec
        Start  71: filterCatalogTest
 68/158 Test  #66: pyChemReactionSanitize .................***Exception: SegFault  1.02 sec

        Start  72: pyFilterCatalog
 69/158 Test  #69: testSubgraphs1 .........................   Passed    0.68 sec
        Start  73: testFragCatalog
 70/158 Test  #71: filterCatalogTest ......................   Passed    0.59 sec
        Start  74: pyFragCatalog
 71/158 Test  #72: pyFilterCatalog ........................***Exception: SegFault  1.11 sec

        Start  75: testDescriptors
 72/158 Test  #74: pyFragCatalog ..........................***Exception: SegFault  1.02 sec

        Start  76: testAUTOCORR2D
 73/158 Test  #73: testFragCatalog ........................   Passed    2.15 sec
        Start  77: pyMolDescriptors
 74/158 Test  #76: testAUTOCORR2D .........................   Passed    1.08 sec
        Start  78: pyMolDescriptors3D
 75/158 Test  #78: pyMolDescriptors3D .....................***Exception: SegFault  1.04 sec

        Start  79: testFingerprints
 76/158 Test  #77: pyMolDescriptors .......................***Exception: SegFault  1.05 sec

        Start  80: testFingerprintGenerators
 77/158 Test  #80: testFingerprintGenerators ..............   Passed    1.93 sec
        Start  81: fpTestCatch
 78/158 Test  #81: fpTestCatch ............................   Passed    0.12 sec
        Start  82: pyTestGenerator
 79/158 Test  #82: pyTestGenerator ........................***Exception: SegFault  1.30 sec

        Start  83: testPartialCharges
 80/158 Test  #83: testPartialCharges .....................   Passed    0.10 sec
        Start  84: pyPartialCharges
 81/158 Test  #84: pyPartialCharges .......................***Exception: SegFault  1.09 sec

        Start  85: testMolTransforms
 82/158 Test  #85: testMolTransforms ......................   Passed    0.21 sec
        Start  86: pyMolTransforms
 83/158 Test  #86: pyMolTransforms ........................***Exception: SegFault  1.25 sec

        Start  87: testMMFFForceFieldHelpers
 84/158 Test  #62: testEnumeration ........................   Passed   31.71 sec
        Start  88: testMMFFForceFieldHelpersMultiThread
 85/158 Test  #88: testMMFFForceFieldHelpersMultiThread ...   Passed    3.39 sec
        Start  89: testUFFForceFieldHelpers
 86/158 Test  #87: testMMFFForceFieldHelpers ..............   Passed   24.75 sec
        Start  90: testCrystalForceField
 87/158 Test  #90: testCrystalForceField ..................   Passed    0.42 sec
        Start  91: pyForceFieldHelpers
 88/158 Test  #91: pyForceFieldHelpers ....................***Exception: SegFault  1.62 sec

        Start  92: testDistGeomHelpers
 89/158 Test  #75: testDescriptors ........................   Passed   40.70 sec
        Start  93: pyDistGeomHelpers
 90/158 Test  #93: pyDistGeomHelpers ......................***Exception: SegFault  1.99 sec

        Start  94: testMolAlign
 91/158 Test  #89: testUFFForceFieldHelpers ...............   Passed   33.46 sec
        Start  95: pyMolAlign
 92/158 Test  #95: pyMolAlign .............................***Exception: SegFault  1.73 sec

        Start  96: testFeatures
 93/158 Test  #96: testFeatures ...........................   Passed    0.19 sec
        Start  97: pyChemicalFeatures
 94/158 Test  #79: testFingerprints .......................   Passed   58.74 sec
        Start  98: testShapeHelpers
 95/158 Test  #97: pyChemicalFeatures .....................***Exception: SegFault  1.19 sec

        Start  99: pyShapeHelpers
 96/158 Test  #98: testShapeHelpers .......................   Passed    0.20 sec
        Start 100: testMolCatalog
 97/158 Test #100: testMolCatalog .........................   Passed    0.21 sec
        Start 101: pyMolCatalog
 98/158 Test  #99: pyShapeHelpers .........................***Exception: SegFault  1.67 sec

        Start 102: moldraw2DTest1
 99/158 Test #101: pyMolCatalog ...........................***Exception: SegFault  1.63 sec

        Start 103: moldraw2DTestCatch
100/158 Test #103: moldraw2DTestCatch .....................   Passed    0.59 sec
        Start 104: moldraw2DRxnTest1
101/158 Test #104: moldraw2DRxnTest1 ......................   Passed    0.47 sec
        Start 105: pyMolDraw2D
102/158 Test #105: pyMolDraw2D ............................***Exception: SegFault  1.96 sec

        Start 106: testFMCS
103/158 Test #106: testFMCS ...............................   Passed    9.86 sec
        Start 107: pyFMCS
104/158 Test #102: moldraw2DTest1 .........................   Passed   13.85 sec
        Start 108: FMCStest
105/158 Test #108: FMCStest ...............................   Passed    0.07 sec
        Start 109: testMolHash
106/158 Test #109: testMolHash ............................   Passed    0.20 sec
        Start 110: molHashCatchTest
107/158 Test #110: molHashCatchTest .......................   Passed    0.11 sec
        Start 111: pyMolHash
108/158 Test #107: pyFMCS .................................***Exception: SegFault  1.60 sec

        Start 112: testMMPA
109/158 Test #112: testMMPA ...............................   Passed    0.34 sec
        Start 113: pyMMPA
110/158 Test #111: pyMolHash ..............................***Exception: SegFault  1.06 sec

        Start 114: testStructChecker
111/158 Test #114: testStructChecker ......................   Passed    0.45 sec
        Start 115: pyStructChecker
112/158 Test #113: pyMMPA .................................***Exception: SegFault  1.15 sec

        Start 116: testReducedGraphs
113/158 Test #116: testReducedGraphs ......................   Passed    0.42 sec
        Start 117: pyReducedGraphs
114/158 Test #115: pyStructChecker ........................***Exception: SegFault  1.21 sec

        Start 118: trajectoryTest
115/158 Test #117: pyReducedGraphs ........................***Exception: SegFault  1.17 sec

        Start 119: substructLibraryTest
116/158 Test #118: trajectoryTest .........................   Passed    1.19 sec
        Start 120: pySubstructLibrary
117/158 Test #120: pySubstructLibrary .....................***Exception: SegFault  1.22 sec

        Start 121: testRGroupDecomp
118/158 Test #119: substructLibraryTest ...................   Passed    2.89 sec
        Start 122: pyRGroupDecomposition
119/158 Test #121: testRGroupDecomp .......................   Passed    1.30 sec
        Start 123: molInterchangeTest1
120/158 Test #123: molInterchangeTest1 ....................   Passed    0.14 sec
        Start 124: pyMolInterchange
121/158 Test #122: pyRGroupDecomposition ..................***Exception: SegFault  1.09 sec

        Start 125: testSLNParse
122/158 Test #125: testSLNParse ...........................   Passed    0.15 sec
        Start 126: pySLNParse
123/158 Test #124: pyMolInterchange .......................***Exception: SegFault  1.21 sec

        Start 127: pyGraphMolWrap
124/158 Test #126: pySLNParse .............................***Exception: SegFault  1.28 sec

        Start 128: pyTestConformerWrap
125/158 Test #127: pyGraphMolWrap .........................***Exception: SegFault  1.26 sec

        Start 129: pyTestTrajectory
126/158 Test #129: pyTestTrajectory .......................***Exception: SegFault  1.23 sec

        Start 130: pyTestSGroups
127/158 Test #128: pyTestConformerWrap ....................***Exception: SegFault  1.32 sec

        Start 131: pyTestThreads
128/158 Test #130: pyTestSGroups ..........................***Exception: SegFault  1.19 sec

        Start 132: pyTestPropertyLists
129/158 Test #131: pyTestThreads ..........................***Exception: SegFault  1.27 sec

        Start 133: molStandardizeTest
130/158 Test #133: molStandardizeTest .....................   Passed    0.52 sec
        Start 134: molNormalizeTest
131/158 Test #134: molNormalizeTest .......................   Passed    0.35 sec
        Start 135: molValidateTest
132/158 Test #135: molValidateTest ........................   Passed    0.19 sec
        Start 136: molChargeTest
133/158 Test #132: pyTestPropertyLists ....................***Exception: SegFault  1.24 sec

        Start 137: molTautomerTest
134/158 Test #136: molChargeTest ..........................   Passed    0.36 sec
        Start 138: molStandardizeSmallTest
135/158 Test #138: molStandardizeSmallTest ................   Passed    0.17 sec
        Start 139: molFragmentTest
136/158 Test #139: molFragmentTest ........................   Passed    0.21 sec
        Start 140: molStandardizeCatchTest
137/158 Test #140: molStandardizeCatchTest ................   Passed    0.26 sec
        Start 141: pyMolStandardize
138/158 Test #141: pyMolStandardize .......................***Exception: SegFault  1.14 sec

        Start 142: testQuery
139/158 Test #142: testQuery ..............................   Passed    0.02 sec
        Start 143: testMatCalc
140/158 Test #143: testMatCalc ............................   Passed    0.02 sec
        Start 144: pyMatCalc
141/158 Test #137: molTautomerTest ........................   Passed    2.63 sec
        Start 145: testSimDivPickers
142/158 Test #145: testSimDivPickers ......................   Passed    0.02 sec
        Start 146: pickersTestsCatch
143/158 Test #146: pickersTestsCatch ......................   Passed    0.20 sec
        Start 147: pySimDivPickers
144/158 Test #144: pyMatCalc ..............................   Passed    1.66 sec
        Start 148: pyRanker
145/158 Test #148: pyRanker ...............................   Passed    0.89 sec
        Start 149: testChemicalFeatures
146/158 Test #149: testChemicalFeatures ...................   Passed    0.01 sec
        Start 150: pyFeatures
147/158 Test #150: pyFeatures .............................***Exception: SegFault  1.05 sec

        Start 151: pythonTestDbCLI
148/158 Test #151: pythonTestDbCLI ........................***Failed    6.59 sec
FFFFFFFFFFFF
======================================================================
FAIL: test1Create (__main__.TestCase)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "TestDbCLI.py", line 18, in test1Create
    self.assertFalse(res)
AssertionError: -11 is not false

======================================================================
FAIL: test2_1SearchFPs (__main__.TestCase)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "TestDbCLI.py", line 70, in test2_1SearchFPs
    self.assertTrue(os.path.exists('testData/bzr/Compounds.sqlt'))
AssertionError: False is not true

======================================================================
FAIL: test2_2SearchAtomPairs (__main__.TestCase)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "TestDbCLI.py", line 102, in test2_2SearchAtomPairs
    self.assertTrue(os.path.exists('testData/bzr/Compounds.sqlt'))
AssertionError: False is not true

======================================================================
FAIL: test2_3SearchTorsions (__main__.TestCase)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "TestDbCLI.py", line 135, in test2_3SearchTorsions
    self.assertTrue(os.path.exists('testData/bzr/Compounds.sqlt'))
AssertionError: False is not true

======================================================================
FAIL: test2_4SearchProps (__main__.TestCase)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "TestDbCLI.py", line 167, in test2_4SearchProps
    self.assertTrue(os.path.exists('testData/bzr/Compounds.sqlt'))
AssertionError: False is not true

======================================================================
FAIL: test2_5SearchSmarts (__main__.TestCase)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "TestDbCLI.py", line 206, in test2_5SearchSmarts
    self.assertFalse(res)
AssertionError: -11 is not false

======================================================================
FAIL: test2_6SearchBoth (__main__.TestCase)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "TestDbCLI.py", line 264, in test2_6SearchBoth
    self.assertFalse(res)
AssertionError: -11 is not false

======================================================================
FAIL: test2_7SearchGobbi (__main__.TestCase)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "TestDbCLI.py", line 288, in test2_7SearchGobbi
    self.assertTrue(os.path.exists('testData/bzr/Compounds.sqlt'))
AssertionError: False is not true

======================================================================
FAIL: test2_8SearchThresh (__main__.TestCase)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "TestDbCLI.py", line 323, in test2_8SearchThresh
    self.assertTrue(os.path.exists('testData/bzr/Compounds.sqlt'))
AssertionError: False is not true

======================================================================
FAIL: test4CreateOptions (__main__.TestCase)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "TestDbCLI.py", line 360, in test4CreateOptions
    self.assertFalse(res)
AssertionError: -11 is not false

======================================================================
FAIL: test5TestBackwardsCompat (__main__.TestCase)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "TestDbCLI.py", line 482, in test5TestBackwardsCompat
    self.assertFalse(res)
AssertionError: -11 is not false

======================================================================
FAIL: test6Update (__main__.TestCase)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "TestDbCLI.py", line 518, in test6Update
    self.assertFalse(res)
AssertionError: -11 is not false

----------------------------------------------------------------------
Ran 12 tests in 6.144s

FAILED (failures=12)
!!! TEST FAILURE:  python TestDbCLI.py {'dir': 'DbCLI'}

        Start 152: pythonTestDirML
149/158 Test #147: pySimDivPickers ........................   Passed   10.98 sec
        Start 153: pythonTestDirDataStructs
150/158 Test #153: pythonTestDirDataStructs ...............***Failed    3.79 sec
..............UnitTestcBitVect.py:42: DeprecationWarning: Please use assertRaisesRegex instead.
  with self.assertRaisesRegexp(IndexError, ""):
....................
----------------------------------------------------------------------
Ran 34 tests in 0.017s

OK
.....
----------------------------------------------------------------------
Ran 5 tests in 0.750s

OK
.......
----------------------------------------------------------------------
Ran 7 tests in 0.005s

OK
!!! TEST FAILURE:  python UnitTestDocTests.py {}

        Start 154: pythonTestDirDbase
151/158 Test #154: pythonTestDirDbase .....................   Passed    4.72 sec
        Start 155: pythonTestDirSimDivFilters
152/158 Test #155: pythonTestDirSimDivFilters .............***Failed    1.17 sec
!!! TEST FAILURE:  python SimilarityPickers.py {}

        Start 156: pythonTestDirVLib
153/158 Test #156: pythonTestDirVLib ......................***Failed    1.58 sec
.............
----------------------------------------------------------------------
Ran 13 tests in 0.023s

OK
!!! TEST FAILURE:  python UnitTestNodeLib.py {}
!!! TEST FAILURE:  python test_list.py {'dir': 'NodeLib'}

        Start 157: pythonTestDirChem
154/158 Test #157: pythonTestDirChem ......................***Exception: SegFault  0.99 sec

        Start 158: pythonTestSping
155/158 Test #158: pythonTestSping ........................***Exception: SegFault  0.99 sec

156/158 Test #152: pythonTestDirML ........................***Failed   34.09 sec
.......
----------------------------------------------------------------------
Ran 7 tests in 1.130s

OK
............
----------------------------------------------------------------------
Ran 12 tests in 0.440s

OK
.
----------------------------------------------------------------------
Ran 1 test in 0.091s

OK
...
----------------------------------------------------------------------
Ran 3 tests in 0.005s

OK
........
----------------------------------------------------------------------
Ran 8 tests in 0.003s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 0.458s

OK
.....
----------------------------------------------------------------------
Ran 5 tests in 0.005s

OK
.........
----------------------------------------------------------------------
Ran 9 tests in 0.011s

OK
............
----------------------------------------------------------------------
Ran 12 tests in 0.005s

OK
.....
----------------------------------------------------------------------
Ran 5 tests in 0.073s

OK
.
----------------------------------------------------------------------
Ran 1 test in 0.001s

OK
......
----------------------------------------------------------------------
Ran 6 tests in 0.005s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 0.541s

OK
......
----------------------------------------------------------------------
Ran 6 tests in 0.046s

OK
..
----------------------------------------------------------------------
Ran 2 tests in 0.326s

OK
..........
----------------------------------------------------------------------
Ran 10 tests in 0.031s

OK
.....
----------------------------------------------------------------------
Ran 5 tests in 0.157s

OK
..
----------------------------------------------------------------------
Ran 2 tests in 0.007s

OK
...
----------------------------------------------------------------------
Ran 3 tests in 0.049s

OK
!!! TEST FAILURE:  python UnitTestMolDescriptors.py {}
...
----------------------------------------------------------------------
Ran 3 tests in 0.844s

OK
......
----------------------------------------------------------------------
Ran 6 tests in 1.242s

OK
!!! TEST FAILURE:  python UnitTestPackage.py {}
....
----------------------------------------------------------------------
Ran 4 tests in 0.031s

OK
.....
----------------------------------------------------------------------
Ran 5 tests in 8.750s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 0.004s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 0.001s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 0.010s

OK
!!! TEST FAILURE:  python test_list.py {'dir': 'Descriptors'}
!!! TEST FAILURE:  python test_list.py {'dir': 'ModelPackage'}

157/158 Test  #92: testDistGeomHelpers ....................   Passed  143.83 sec
158/158 Test  #94: testMolAlign ...........................   Passed  533.92 sec

72% tests passed, 44 tests failed out of 158

Total Test time (real) = 642.23 sec

The following tests FAILED:
	  2 - pyCoordGen (SEGFAULT)
	 23 - pyForceFieldConstraints (SEGFAULT)
	 43 - pyDepictor (SEGFAULT)
	 64 - pyChemReactions (SEGFAULT)
	 65 - pyChemReactionEnumerations (SEGFAULT)
	 66 - pyChemReactionSanitize (SEGFAULT)
	 72 - pyFilterCatalog (SEGFAULT)
	 74 - pyFragCatalog (SEGFAULT)
	 77 - pyMolDescriptors (SEGFAULT)
	 78 - pyMolDescriptors3D (SEGFAULT)
	 82 - pyTestGenerator (SEGFAULT)
	 84 - pyPartialCharges (SEGFAULT)
	 86 - pyMolTransforms (SEGFAULT)
	 91 - pyForceFieldHelpers (SEGFAULT)
	 93 - pyDistGeomHelpers (SEGFAULT)
	 95 - pyMolAlign (SEGFAULT)
	 97 - pyChemicalFeatures (SEGFAULT)
	 99 - pyShapeHelpers (SEGFAULT)
	101 - pyMolCatalog (SEGFAULT)
	105 - pyMolDraw2D (SEGFAULT)
	107 - pyFMCS (SEGFAULT)
	111 - pyMolHash (SEGFAULT)
	113 - pyMMPA (SEGFAULT)
	115 - pyStructChecker (SEGFAULT)
	117 - pyReducedGraphs (SEGFAULT)
	120 - pySubstructLibrary (SEGFAULT)
	122 - pyRGroupDecomposition (SEGFAULT)
	124 - pyMolInterchange (SEGFAULT)
	126 - pySLNParse (SEGFAULT)
	127 - pyGraphMolWrap (SEGFAULT)
	128 - pyTestConformerWrap (SEGFAULT)
	129 - pyTestTrajectory (SEGFAULT)
	130 - pyTestSGroups (SEGFAULT)
	131 - pyTestThreads (SEGFAULT)
	132 - pyTestPropertyLists (SEGFAULT)
	141 - pyMolStandardize (SEGFAULT)
	150 - pyFeatures (SEGFAULT)
	151 - pythonTestDbCLI (Failed)
	152 - pythonTestDirML (Failed)
	153 - pythonTestDirDataStructs (Failed)
	155 - pythonTestDirSimDivFilters (Failed)
	156 - pythonTestDirVLib (Failed)
	157 - pythonTestDirChem (SEGFAULT)
	158 - pythonTestSping (SEGFAULT)
Errors while running CTest
make[2]: *** [Makefile:109: test] Error 8
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
dh_auto_test: error: cd obj-arm-linux-gnueabihf && make -j4 test ARGS\+=-j4 returned exit code 2
make[1]: [debian/rules:124: override_dh_auto_test] Error 25 (ignored)
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
 fakeroot debian/rules binary-arch
dh binary-arch --with python3 --buildsystem=cmake --parallel
dh: warning: Compatibility levels before 10 are deprecated (level 9 in use)
   dh_testroot -a -O--buildsystem=cmake -O--parallel
   dh_prep -a -O--buildsystem=cmake -O--parallel
   debian/rules override_dh_auto_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_install
dh_auto_install: warning: Compatibility levels before 10 are deprecated (level 9 in use)
	cd obj-arm-linux-gnueabihf && make -j4 install DESTDIR=/<<PKGBUILDDIR>>/debian/tmp AM_UPDATE_INFO_DIR=no
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cmake -S/<<PKGBUILDDIR>> -B/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles/progress.marks
make -f CMakeFiles/Makefile2 all
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f External/catch/CMakeFiles/catch.dir/build.make External/catch/CMakeFiles/catch.dir/depend
make -f External/INCHI-API/CMakeFiles/inchi_support.dir/build.make External/INCHI-API/CMakeFiles/inchi_support.dir/depend
make -f External/CoordGen/CMakeFiles/coordgen_support.dir/build.make External/CoordGen/CMakeFiles/coordgen_support.dir/depend
make -f External/RingFamilies/CMakeFiles/ringdecomposerlib_support.dir/build.make External/RingFamilies/CMakeFiles/ringdecomposerlib_support.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/External/catch /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/catch /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/catch/CMakeFiles/catch.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/External/INCHI-API /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/INCHI-API /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/INCHI-API/CMakeFiles/inchi_support.dir/DependInfo.cmake --color=
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/External/CoordGen /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/CMakeFiles/coordgen_support.dir/DependInfo.cmake --color=
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/External/RingFamilies /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/RingFamilies /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/RingFamilies/CMakeFiles/ringdecomposerlib_support.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f External/CoordGen/CMakeFiles/coordgen_support.dir/build.make External/CoordGen/CMakeFiles/coordgen_support.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'External/CoordGen/CMakeFiles/coordgen_support.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f External/RingFamilies/CMakeFiles/ringdecomposerlib_support.dir/build.make External/RingFamilies/CMakeFiles/ringdecomposerlib_support.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f External/INCHI-API/CMakeFiles/inchi_support.dir/build.make External/INCHI-API/CMakeFiles/inchi_support.dir/build
make -f External/catch/CMakeFiles/catch.dir/build.make External/catch/CMakeFiles/catch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'External/RingFamilies/CMakeFiles/ringdecomposerlib_support.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/INCHI-API && /usr/bin/cmake -E copy /<<PKGBUILDDIR>>/External/INCHI-API/python/noinchi.py /<<PKGBUILDDIR>>/rdkit/Chem/inchi.py
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'External/catch/CMakeFiles/catch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  0%] Built target coordgen_support
[  0%] Built target ringdecomposerlib_support
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  0%] Built target catch
make -f Code/RDGeneral/CMakeFiles/RDGeneral.dir/build.make Code/RDGeneral/CMakeFiles/RDGeneral.dir/depend
make -f Code/RDStreams/CMakeFiles/RDStreams.dir/build.make Code/RDStreams/CMakeFiles/RDStreams.dir/depend
make -f Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/build.make Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/RDGeneral.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDStreams /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDStreams /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDStreams/CMakeFiles/RDStreams.dir/DependInfo.cmake --color=
[  0%] Built target inchi_support
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ML/Cluster/Murtagh /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/RDStreams/CMakeFiles/RDStreams.dir/build.make Code/RDStreams/CMakeFiles/RDStreams.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/build.make Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/build
make -f Code/RDGeneral/CMakeFiles/RDGeneral.dir/build.make Code/RDGeneral/CMakeFiles/RDGeneral.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/RDStreams/CMakeFiles/RDStreams.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/RDGeneral/CMakeFiles/RDGeneral.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  1%] Built target RDStreams
[  2%] Built target hc
[  3%] Built target RDGeneral
make -f Code/DataStructs/CMakeFiles/DataStructs.dir/build.make Code/DataStructs/CMakeFiles/DataStructs.dir/depend
make -f Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/build.make Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/depend
make -f Code/RDBoost/CMakeFiles/RDBoost.dir/build.make Code/RDBoost/CMakeFiles/RDBoost.dir/depend
make -f Code/RDGeneral/CMakeFiles/testRDValue.dir/build.make Code/RDGeneral/CMakeFiles/testRDValue.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/EigenSolvers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/DataStructs.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDBoost /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost/CMakeFiles/RDBoost.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/testRDValue.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/build.make Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/DataStructs/CMakeFiles/DataStructs.dir/build.make Code/DataStructs/CMakeFiles/DataStructs.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/RDBoost/CMakeFiles/RDBoost.dir/build.make Code/RDBoost/CMakeFiles/RDBoost.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/RDGeneral/CMakeFiles/testRDValue.dir/build.make Code/RDGeneral/CMakeFiles/testRDValue.dir/build
[  3%] Built target EigenSolvers
make -f Code/RDGeneral/CMakeFiles/testDict.dir/build.make Code/RDGeneral/CMakeFiles/testDict.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/DataStructs/CMakeFiles/DataStructs.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/testDict.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/RDBoost/CMakeFiles/RDBoost.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/RDGeneral/CMakeFiles/testRDValue.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  5%] Built target DataStructs
make -f Code/Numerics/CMakeFiles/testMatrices.dir/build.make Code/Numerics/CMakeFiles/testMatrices.dir/depend
[  5%] Built target RDBoost
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/RDGeneral/CMakeFiles/testDict.dir/build.make Code/RDGeneral/CMakeFiles/testDict.dir/build
make -f Code/Catalogs/CMakeFiles/Catalogs.dir/build.make Code/Catalogs/CMakeFiles/Catalogs.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/RDGeneral/CMakeFiles/testDict.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Catalogs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Catalogs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Catalogs/CMakeFiles/Catalogs.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/CMakeFiles/testMatrices.dir/DependInfo.cmake --color=
[  5%] Built target testRDValue
make -f Code/Query/CMakeFiles/testQuery.dir/build.make Code/Query/CMakeFiles/testQuery.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Query /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Query /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Query/CMakeFiles/testQuery.dir/DependInfo.cmake --color=
[  6%] Built target testDict
make -f Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/build.make Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Catalogs/CMakeFiles/Catalogs.dir/build.make Code/Catalogs/CMakeFiles/Catalogs.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataManip/MetricMatrixCalc /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/DependInfo.cmake --color=
make -f Code/Numerics/CMakeFiles/testMatrices.dir/build.make Code/Numerics/CMakeFiles/testMatrices.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Catalogs/CMakeFiles/Catalogs.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Numerics/CMakeFiles/testMatrices.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Query/CMakeFiles/testQuery.dir/build.make Code/Query/CMakeFiles/testQuery.dir/build
[  6%] Built target Catalogs
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Query/CMakeFiles/testQuery.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  6%] Built target testMatrices
make -f Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/build.make Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/build
make -f Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/build.make Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/depend
make -f Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataManip/MetricMatrixCalc/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  7%] Built target testQuery
make -f Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/build.make Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/depend
[  8%] Built target testMatCalc
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ML/Cluster/Murtagh /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/DependInfo.cmake --color=
make -f Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build.make Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ML/InfoTheory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/build.make Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build.make Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/build.make Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  9%] Built target SimDivPickers
make -f Code/Geometry/CMakeFiles/RDGeometryLib.dir/build.make Code/Geometry/CMakeFiles/RDGeometryLib.dir/depend
[  9%] Built target rdMetricMatrixCalc
make -f Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/build.make Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/depend
[  9%] Built target InfoTheory
make -f Code/DataStructs/CMakeFiles/testFPB.dir/build.make Code/DataStructs/CMakeFiles/testFPB.dir/depend
[  9%] Built target Clustering
make -f Code/DataStructs/CMakeFiles/testDataStructs.dir/build.make Code/DataStructs/CMakeFiles/testDataStructs.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/testFPB.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/RDGeometryLib.dir/DependInfo.cmake --color=
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDBoost/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/testDataStructs.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/DataStructs/CMakeFiles/testFPB.dir/build.make Code/DataStructs/CMakeFiles/testFPB.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/DataStructs/CMakeFiles/testFPB.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/build.make Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/build
make -f Code/DataStructs/CMakeFiles/testDataStructs.dir/build.make Code/DataStructs/CMakeFiles/testDataStructs.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/DataStructs/CMakeFiles/testDataStructs.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Geometry/CMakeFiles/RDGeometryLib.dir/build.make Code/Geometry/CMakeFiles/RDGeometryLib.dir/build
[ 10%] Built target testFPB
make -f Code/DataStructs/CMakeFiles/testMultiFPB.dir/build.make Code/DataStructs/CMakeFiles/testMultiFPB.dir/depend
[ 10%] Built target testDataStructs
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/testMultiFPB.dir/DependInfo.cmake --color=
[ 10%] Built target rdBase
make -f Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/build.make Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Geometry/CMakeFiles/RDGeometryLib.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/build.make Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataStructs/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/DataStructs/CMakeFiles/testMultiFPB.dir/build.make Code/DataStructs/CMakeFiles/testMultiFPB.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/DataStructs/CMakeFiles/testMultiFPB.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 11%] Built target RDGeometryLib
make -f Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/depend
[ 11%] Built target testMultiFPB
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/DependInfo.cmake --color=
make -f Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build.make Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/build.make Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/build.make Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build.make Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build
[ 11%] Built target pickersTestsCatch
make -f Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build.make Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 12%] Built target testSimDivPickers
make -f Code/ML/Data/CMakeFiles/cQuantize.dir/build.make Code/ML/Data/CMakeFiles/cQuantize.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ML/InfoTheory/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ML/Data /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Data /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Data/CMakeFiles/cQuantize.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 13%] Built target cDataStructs
make -f Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/depend
[ 14%] Built target rdSimDivPickers
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/DependInfo.cmake --color=
make -f Code/GraphMol/CMakeFiles/GraphMol.dir/build.make Code/GraphMol/CMakeFiles/GraphMol.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ML/Data/CMakeFiles/cQuantize.dir/build.make Code/ML/Data/CMakeFiles/cQuantize.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build.make Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/GraphMol.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/ML/Data/CMakeFiles/cQuantize.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 14%] Built target cQuantize
make -f Code/Numerics/Alignment/CMakeFiles/Alignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/Alignment.dir/depend
[ 15%] Built target ChemicalFeatures
make -f Code/Geometry/CMakeFiles/geometryTestsCatch.dir/build.make Code/Geometry/CMakeFiles/geometryTestsCatch.dir/depend
[ 15%] Built target rdInfoTheory
make -f Code/Geometry/CMakeFiles/testGrid.dir/build.make Code/Geometry/CMakeFiles/testGrid.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/geometryTestsCatch.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/Alignment /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/CMakeFiles/Alignment.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/testGrid.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/GraphMol.dir/build.make Code/GraphMol/CMakeFiles/GraphMol.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Geometry/CMakeFiles/geometryTestsCatch.dir/build.make Code/Geometry/CMakeFiles/geometryTestsCatch.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Geometry/CMakeFiles/testGrid.dir/build.make Code/Geometry/CMakeFiles/testGrid.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Geometry/CMakeFiles/geometryTestsCatch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Geometry/CMakeFiles/testGrid.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Numerics/Alignment/CMakeFiles/Alignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/Alignment.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/GraphMol.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Numerics/Alignment/CMakeFiles/Alignment.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 16%] Built target geometryTestsCatch
make -f Code/Geometry/CMakeFiles/testTransforms.dir/build.make Code/Geometry/CMakeFiles/testTransforms.dir/depend
[ 16%] Built target Alignment
make -f Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build.make Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/depend
[ 16%] Built target testGrid
make -f Code/Numerics/CMakeFiles/testConrec.dir/build.make Code/Numerics/CMakeFiles/testConrec.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/testTransforms.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Geometry/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/DependInfo.cmake --color=
[ 21%] Built target GraphMol
make -f Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/CMakeFiles/testConrec.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/Alignment /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build.make Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Geometry/CMakeFiles/testTransforms.dir/build.make Code/Geometry/CMakeFiles/testTransforms.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Geometry/CMakeFiles/testTransforms.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Numerics/CMakeFiles/testConrec.dir/build.make Code/Numerics/CMakeFiles/testConrec.dir/build
[ 22%] Built target rdGeometry
make -f Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build.make Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/Alignment/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/DependInfo.cmake --color=
[ 23%] Built target testTransforms
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Numerics/CMakeFiles/testConrec.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/depend
[ 23%] Built target testConrec
make -f Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/DependInfo.cmake --color=
make -f Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build.make Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 23%] Built target testAlignment
make -f Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 24%] Built target rdAlignment
make -f Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build
[ 26%] Built target PartialCharges
[ 26%] Built target Subgraphs
make -f Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/build
make -f Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 27%] Built target MolCatalog
make -f Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/depend
[ 27%] Built target MolInterchange
make -f Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build.make Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ChemicalFeatures/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build.make Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 28%] Built target SLNParse
make -f Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 29%] Built target rdChemicalFeatures
make -f Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/depend
[ 29%] Built target rdqueries
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/DependInfo.cmake --color=
make -f Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/DependInfo.cmake --color=
[ 30%] Built target testChemicalFeatures
make -f Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/build
make -f Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 31%] Built target Trajectory
[ 33%] Built target SmilesParse
make -f Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build.make Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/depend
make -f Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/build.make Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/depend
[ 33%] Built target SubstructMatch
make -f Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/depend
[ 33%] Built target MolTransforms
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/DependInfo.cmake --color=
make -f Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/Optimizer /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build.make Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/build.make Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 33%] Built target rdPartialCharges
[ 34%] Built target rdMolInterchange
make -f Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/depend
[ 34%] Built target Optimizer
[ 35%] Built target rdtrajectory
make -f Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/depend
make -f Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolcpTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/DependInfo.cmake --color=
make -f Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolcpTest.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build
[ 35%] Built target graphmolSGroupCatch
make -f Code/GraphMol/CMakeFiles/test-valgrind.dir/build.make Code/GraphMol/CMakeFiles/test-valgrind.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/test-valgrind.dir/DependInfo.cmake --color=
[ 35%] Built target graphmolqueryTest
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolIterTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolIterTest.dir/DependInfo.cmake --color=
[ 36%] Built target graphmolcpTest
make -f Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/depend
[ 36%] Built target graphmolMemTest1
make -f Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/test-valgrind.dir/build.make Code/GraphMol/CMakeFiles/test-valgrind.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/test-valgrind.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 36%] Built target test-valgrind
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/depend
[ 36%] Built target graphmolIterTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/build
make -f Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/build
[ 37%] Built target smaTest1
make -f Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/build
[ 37%] Built target ChemTransforms
make -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/build'.
make -f Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build
[ 38%] Built target FilterCatalog
make -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 38%] Built target smiTest2
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/DependInfo.cmake --color=
make -f Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/DependInfo.cmake --color=
[ 39%] Built target testSubgraphs2
make -f Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/DependInfo.cmake --color=
make -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/build
[ 41%] Built target Fingerprints
make -f Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build.make Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/DependInfo.cmake --color=
make -f Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 41%] Built target testSubgraphs1
make -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build.make Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/DependInfo.cmake --color=
[ 42%] Built target FragCatalog
make -f Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 42%] Built target testPartialCharges
make -f Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/DependInfo.cmake --color=
[ 42%] Built target rdMolTransforms
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/DependInfo.cmake --color=
make -f Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build'.
make -f Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 42%] Built target MolChemicalFeatures
make -f Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/depend
[ 42%] Built target ShapeHelpers
make -f Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/build.make Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 42%] Built target ReducedGraphs
make -f Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/depend
[ 42%] Built target SubstructLibrary
make -f Code/ForceField/CMakeFiles/ForceField.dir/build.make Code/ForceField/CMakeFiles/ForceField.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ForceField /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/CMakeFiles/ForceField.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/build.make Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/build
[ 42%] Built target testSLNParse
make -f Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/depend
[ 42%] Built target rdSLNParse
make -f Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build.make Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/Optimizer /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build.make Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ForceField/CMakeFiles/ForceField.dir/build.make Code/ForceField/CMakeFiles/ForceField.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 43%] Built target testOptimizer
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/ForceField/CMakeFiles/ForceField.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/depend
[ 45%] Built target rdchem
make -f Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/depend
[ 45%] Built target rdFingerprintGenerator
make -f Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/depend
[ 48%] Built target ForceField
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/DependInfo.cmake --color=
make -f Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 48%] Built target rdMolChemicalFeatures
make -f Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/depend
[ 48%] Built target testReducedGraphs
[ 48%] Built target rdShapeHelpers
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 48%] Built target rdReducedGraphs
[ 49%] Built target ForceFieldHelpers
make -f Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/depend
make -f Code/DistGeom/CMakeFiles/DistGeometry.dir/build.make Code/DistGeom/CMakeFiles/DistGeometry.dir/depend
make -f Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build.make Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/depend
make -f Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DistGeom /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/CMakeFiles/DistGeometry.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ForceField/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/DistGeom/CMakeFiles/DistGeometry.dir/build.make Code/DistGeom/CMakeFiles/DistGeometry.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build.make Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/DistGeom/CMakeFiles/DistGeometry.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 50%] Built target DistGeometry
[ 50%] Built target MolAlign
make -f Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/depend
make -f Code/DistGeom/CMakeFiles/testDistGeom.dir/build.make Code/DistGeom/CMakeFiles/testDistGeom.dir/depend
[ 51%] Built target rdForceField
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build.make Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/depend
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DistGeom /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/CMakeFiles/testDistGeom.dir/DependInfo.cmake --color=
[ 51%] Built target rdForceFieldHelpers
make -f Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DistGeom/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Depictor /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/DistGeom/CMakeFiles/testDistGeom.dir/build.make Code/DistGeom/CMakeFiles/testDistGeom.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build.make Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/DistGeom/CMakeFiles/testDistGeom.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 51%] Built target Depictor
make -f External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/build.make External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/depend
[ 51%] Built target testDistGeom
make -f Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/External/CoordGen/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/DependInfo.cmake --color=
[ 52%] Built target DistGeomHelpers
[ 52%] Built target DistGeom
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/build.make External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 56%] Built target FileParsers
make -f External/CoordGen/CMakeFiles/testCoordGen.dir/build.make External/CoordGen/CMakeFiles/testCoordGen.dir/depend
make -f Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build.make Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/depend
[ 56%] Built target rdCoordGen
make -f Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/build.make Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/depend
make -f Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ForceField/UFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/UFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ForceField/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/External/CoordGen /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/CMakeFiles/testCoordGen.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f External/CoordGen/CMakeFiles/testCoordGen.dir/build.make External/CoordGen/CMakeFiles/testCoordGen.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'External/CoordGen/CMakeFiles/testCoordGen.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build.make Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/build.make Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/build
make -f Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build
[ 56%] Built target testCoordGen
make -f Code/GraphMol/CMakeFiles/graphmolTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolTest1.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 56%] Built target testUFFForceField
make -f Code/GraphMol/CMakeFiles/hanoiTest.dir/build.make Code/GraphMol/CMakeFiles/hanoiTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/hanoiTest.dir/DependInfo.cmake --color=
[ 56%] Built target testMMFFForceField
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolTest1.dir/build
make -f Code/GraphMol/CMakeFiles/testSGroup.dir/build.make Code/GraphMol/CMakeFiles/testSGroup.dir/depend
[ 56%] Built target graphmolTestsCatch
make -f Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/testSGroup.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolTest1.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/hanoiTest.dir/build.make Code/GraphMol/CMakeFiles/hanoiTest.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/testSGroup.dir/build.make Code/GraphMol/CMakeFiles/testSGroup.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/hanoiTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/testSGroup.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 56%] Built target graphmolTest1
make -f Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build
[ 56%] Built target hanoiTest
make -f Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/depend
[ 57%] Built target testSGroup
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/DependInfo.cmake --color=
make -f Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Built target graphmoltestPicklerGlobalSetting
make -f Code/GraphMol/CMakeFiles/molBundleTest.dir/build.make Code/GraphMol/CMakeFiles/molBundleTest.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/build
[ 58%] Built target graphmolMolOpsTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/molBundleTest.dir/DependInfo.cmake --color=
make -f Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build
make -f Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/build.make Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/molBundleTest.dir/build.make Code/GraphMol/CMakeFiles/molBundleTest.dir/build
[ 58%] Built target graphmoltestChirality
make -f Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/depend
[ 59%] Built target graphmoltestPickler
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Depictor /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/build.make Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/build
make -f Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build.make Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/molBundleTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/DependInfo.cmake --color=
[ 59%] Built target molBundleTest
make -f Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/build
make -f Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/DependInfo.cmake --color=
[ 59%] Built target resMolSupplierTest
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/depend
[ 59%] Built target testDepictor
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/DependInfo.cmake --color=
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build.make Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 60%] Built target rdDepictor
make -f Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/depend
[ 60%] Built target smiTest1
make -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/depend
[ 60%] Built target cxsmilesTest
make -f Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/depend
[ 60%] Built target smiTestCatch
make -f Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/DependInfo.cmake --color=
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build
[ 60%] Built target testMol2ToMol
make -f Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 61%] Built target testMolSupplier
make -f Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/DependInfo.cmake --color=
[ 62%] Built target fileParsersTest1
make -f Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build
[ 62%] Built target testPropertyLists
make -f Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Built target testMolWriter
make -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/depend
[ 62%] Built target testTplParser
make -f Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/DependInfo.cmake --color=
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build
[ 62%] Built target testSequence
make -f Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Built target testExtendedStereoParsing
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/DependInfo.cmake --color=
make -f Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/depend
[ 62%] Built target substructTestCatch
make -f Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build
[ 62%] Built target fileParsersCatchTest
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/build
[ 62%] Built target testSubstructMatch
make -f Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build
[ 63%] Built target chemTransformsTestCatch
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build.make Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 65%] Built target Descriptors
make -f Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/depend
[ 65%] Built target testChemTransforms
make -f Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build.make Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/depend
[ 65%] Built target filterCatalogTest
make -f Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build.make Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 66%] Built target rdfiltercatalog
make -f Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build.make Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build
make -f Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build
[ 67%] Built target testAUTOCORR2D
make -f Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build.make Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/depend
[ 67%] Built target testFragCatalog
make -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/depend
[ 68%] Built target rdfragcatalog
make -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/DependInfo.cmake --color=
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build.make Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Built target testDescriptors
make -f Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/depend
[ 69%] Built target testFingerprints
[ 70%] Built target rdMolDescriptors
make -f Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/DependInfo.cmake --color=
make -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/DependInfo.cmake --color=
[ 70%] Built target testFingerprintGenerators
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/DependInfo.cmake --color=
make -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 70%] Built target testMolTransforms
make -f Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/depend
[ 70%] Built target testMMFFForceFieldHelpersMultiThread
make -f Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build.make Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/depend
[ 70%] Built target fpTestCatch
make -f Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/depend
[ 71%] Built target testMMFFForceFieldHelpers
make -f Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build.make Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build.make Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build.make Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build
[ 72%] Built target testCrystalForceField
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 72%] Built target testUFFForceFieldHelpers
make -f Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build.make Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/DependInfo.cmake --color=
[ 72%] Built target testDistGeomHelpers
make -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build
[ 72%] Built target rdDistGeom
make -f Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build.make Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build
[ 73%] Built target testMolAlign
make -f Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/depend
[ 73%] Built target testFeatures
make -f Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build.make Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/DependInfo.cmake --color=
[ 73%] Built target rdMolAlign
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FMCS /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build
[ 73%] Built target testShapeHelpers
make -f Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolHash /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build.make Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build
[ 73%] Built target testMolCatalog
make -f Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MMPA /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 74%] Built target rdMolCatalog
make -f Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/build.make Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/DependInfo.cmake --color=
[ 75%] Built target FMCS
make -f Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/build.make Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build
[ 76%] Built target MolHash
make -f Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/DependInfo.cmake --color=
[ 77%] Built target MMPA
make -f Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/depend
[ 78%] Built target StructChecker
make -f Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 79%] Built target trajectoryTest
make -f Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 80%] Built target substructLibraryTest
make -f Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 80%] Built target rdSubstructLibrary
make -f Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/DependInfo.cmake --color=
[ 80%] Built target RGroupDecomposition
make -f Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/DependInfo.cmake --color=
[ 80%] Built target molInterchangeTest1
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FMCS /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/DependInfo.cmake --color=
make -f Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build.make Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build
make -f Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build.make Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 81%] Built target rdmolfiles
make -f Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/build.make Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/depend
[ 81%] Built target testFMCS
make -f Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/build.make Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/depend
[ 84%] Built target ChemReactions
make -f Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/DependInfo.cmake --color=
[ 84%] Built target rdFMCS
make -f Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build.make Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolHash /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolHash /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/build.make Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/build.make Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build.make Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 84%] Built target testMolHash
[ 84%] Built target molHashCatchTest
make -f Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/depend
make -f Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build.make Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/depend
[ 84%] Built target FMCStest
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MMPA /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/DependInfo.cmake --color=
make -f Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/build.make Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/depend
[ 84%] Built target rdMolHash
make -f Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/build.make Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MMPA/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build.make Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/build.make Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/build.make Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 85%] Built target rdMMPA
make -f Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/depend
[ 85%] Built target testMMPA
make -f Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/depend
[ 85%] Built target testStructChecker
make -f Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/depend
[ 86%] Built target rdStructChecker
make -f Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 86%] Built target testRGroupDecomp
make -f Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 87%] Built target testReaction
[ 88%] Built target rdRGroupDecomposition
make -f Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/depend
make -f Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/DependInfo.cmake --color=
[ 92%] Built target MolStandardize
make -f Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build.make Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build.make Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 92%] Built target testReactionFingerprints
make -f Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/depend
[ 92%] Built target rxnTestCatch
make -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DependInfo.cmake --color=
[ 93%] Built target testEnumeration
make -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/depend
[ 93%] Built target rdChemReactions
make -f Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/build
[ 94%] Built target MolDraw2D
make -f Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 95%] Built target molStandardizeTest
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/build
[ 95%] Built target molValidateTest
make -f Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/DependInfo.cmake --color=
[ 95%] Built target molStandardizeSmallTest
make -f Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/build
[ 96%] Built target molNormalizeTest
make -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/DependInfo.cmake --color=
make -f Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/build
make -f Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 96%] Built target molChargeTest
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/build
make -f Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/build.make Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/depend
[ 96%] Built target molTautomerTest
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/depend
[ 97%] Built target molFragmentTest
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/build.make Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/build
[ 97%] Built target molStandardizeCatchTest
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 97%] Built target moldraw2DRxnTest1
make -f Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build
[ 98%] Built target rdMolStandardize
make -f Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/depend
[ 98%] Built target moldraw2DTestCatch
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build
[ 99%] Built target moldraw2DTest1
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 99%] Built target rdMolDraw2D
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[100%] Built target rdmolops
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles 0
make -f CMakeFiles/Makefile2 preinstall
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'preinstall'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "None"
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/cmake/rdkit/rdkit-targets.cmake
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/cmake/rdkit/rdkit-targets-none.cmake
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/cmake/rdkit/rdkit-config.cmake
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/cmake/rdkit/rdkit-config-version.cmake
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Avalon
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Avalon/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/AllChem.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/AtomPairs
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/AtomPairs/Pairs.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/AtomPairs/Sheridan.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/AtomPairs/Torsions.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/AtomPairs/Utils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/AtomPairs/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/BRICS.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/BuildFragmentCatalog.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/ChemUtils
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/ChemUtils/AlignDepict.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/ChemUtils/BulkTester.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/ChemUtils/DescriptorUtilities.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/ChemUtils/SDFToCSV.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/ChemUtils/TemplateExpand.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/ChemUtils/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/ChemicalFeatures.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/ChemicalForceFields.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Crippen.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/DSViewer.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Descriptors.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Descriptors3D.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/FreeSans.ttf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/IPythonConsole.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/MolDrawing.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/SimilarityMaps.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/aggCanvas.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/cairoCanvas.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/canvasbase.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/mplCanvas.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/qtCanvas.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/spingCanvas.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/EState
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/EState/AtomTypes.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/EState/EState.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/EState/EState_VSA.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/EState/Fingerprinter.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/EState/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/EnumerateHeterocycles.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/EnumerateStereoisomers.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FastSDMolSupplier.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FeatFinderCLI.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FeatMaps
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FeatMaps/FeatMapParser.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FeatMaps/FeatMapPoint.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FeatMaps/FeatMapUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FeatMaps/FeatMaps.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FeatMaps/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Features
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Features/FeatDirUtilsRD.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Features/ShowFeats.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Features/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FilterCatalog.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Fingerprints
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Fingerprints/ClusterMols.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Fingerprints/DbFpSupplier.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Fingerprints/FingerprintMols.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Fingerprints/MolSimilarity.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Fingerprints/SimilarityScreener.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Fingerprints/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Fraggle
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Fraggle/FraggleSim.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Fraggle/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FragmentCatalog.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FragmentMatcher.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Fragments.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FunctionalGroups.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/GraphDescriptors.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Graphs.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Lipinski.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MACCSkeys.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MCS.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolCatalog.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolDb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolDb/FingerprintUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolDb/Loader.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolDb/Loader_orig.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolDb/Loader_sa.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolDb/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolKey
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolKey/InchiInfo.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolKey/MolKey.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolKey/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/charge.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/errors.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/fragment.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/metal.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/normalize.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/resonance.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/standardize.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/tautomer.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/test_standardizer.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/utils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/validate.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/validations.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolSurf.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/PandasTools.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/Generate.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/Gobbi_Pharm2D.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/LazyGenerator.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/Matcher.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/SigFactory.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/Utils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm3D
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm3D/EmbedLib.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm3D/ExcludedVolume.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm3D/Pharmacophore.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm3D/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/PropertyMol.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/PyMol.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/QED.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Randomize.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Recap.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/ReducedGraphs.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/SATIS.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/SaltRemover.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Scaffolds
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Scaffolds/MurckoScaffold.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Scaffolds/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/ShowMols.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/SimpleEnum
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/SimpleEnum/Enumerator.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/SimpleEnum/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Subshape
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Subshape/BuilderUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Subshape/SubshapeAligner.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Subshape/SubshapeBuilder.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Subshape/SubshapeObjects.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Subshape/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Subshape/testCombined.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Suppliers
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Suppliers/DbMolSupplier.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Suppliers/MolSupplier.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Suppliers/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/TemplateAlign.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/TorsionFingerprints.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/fmcs
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/fmcs/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/fmcs/fmcs
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/fmcs/fmcs.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/inchi.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataManip
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataManip/Metric
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataManip/Metric/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataManip/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataStructs
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataStructs/BitEnsemble.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataStructs/BitEnsembleDb.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataStructs/BitUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataStructs/HierarchyVis.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataStructs/LazySignature.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataStructs/TopNContainer.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataStructs/VectCollection.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataStructs/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataStructs/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Dbase
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Dbase/DbConnection.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Dbase/DbInfo.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Dbase/DbModule.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Dbase/DbReport.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Dbase/DbResultSet.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Dbase/DbUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Dbase/StorageUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Dbase/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Dbase/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DistanceGeometry
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DistanceGeometry/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ForceField
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ForceField/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Geometry
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Geometry/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/AnalyzeComposite.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/BuildComposite.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Cluster
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Cluster/Butina.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Cluster/ClusterUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Cluster/ClusterVis.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Cluster/Clusters.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Cluster/Murtagh.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Cluster/Resemblance.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Cluster/Standardize.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Cluster/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Cluster/murtagh_test.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Cluster/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Composite
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Composite/AdjustComposite.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Composite/BayesComposite.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Composite/Composite.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Composite/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Composite/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/CompositeRun.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Data
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Data/DataUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Data/FindQuantBounds.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Data/MLData.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Data/Quantize.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Data/SplitData.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Data/Stats.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Data/Transforms.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Data/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Data/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/BuildQuantTree.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/BuildSigTree.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/CrossValidate.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/DecTree.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/Forest.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/ID3.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/PruneTree.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/QuantTree.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/SigTree.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/Tree.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/TreeUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/TreeVis.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/randomtest.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Descriptors
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Descriptors/CompoundDescriptors.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Descriptors/Descriptors.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Descriptors/MoleculeDescriptors.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Descriptors/Parser.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Descriptors/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Descriptors/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/EnrichPlot.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/GrowComposite.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/InfoTheory
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/InfoTheory/BitClusterer.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/InfoTheory/BitRank.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/InfoTheory/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/InfoTheory/entropy.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/InfoTheory/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/KNN
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/KNN/CrossValidate.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/KNN/DistFunctions.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/KNN/KNNClassificationModel.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/KNN/KNNModel.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/KNN/KNNRegressionModel.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/KNN/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/KNN/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/MLUtils
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/MLUtils/VoteImg.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/MLUtils/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/MatOps.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/ModelPackage
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/ModelPackage/PackageUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/ModelPackage/Packager.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/ModelPackage/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/ModelPackage/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/NaiveBayes
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/NaiveBayes/ClassificationModel.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/NaiveBayes/CrossValidate.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/NaiveBayes/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/NaiveBayes/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Neural
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Neural/ActFuncs.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Neural/CrossValidate.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Neural/NetNode.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Neural/Network.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Neural/Trainers.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Neural/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Neural/architecture.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Neural/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/SLT
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/SLT/Risk.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/SLT/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/SLT/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Scoring
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Scoring/Scoring.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Scoring/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Scoring/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/ScreenComposite.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/files.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Numerics
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Numerics/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/RDConfig.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/RDLogger.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/RDRandom.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/SimDivFilters
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/SimDivFilters/SimilarityPickers.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/SimDivFilters/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/SimDivFilters/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/TestRunner.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/Filter.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/Node.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/NodeLib
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/DbMolSupply.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/DbPickleSupplier.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/SDSupply.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/SmartsMolFilter.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/SmartsRemover.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/SmilesDupeFilter.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/SmilesOutput.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/SmilesSupply.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/demo.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/Output.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/Supply.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/Transform.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/six.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PDF
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PDF/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PDF/pdfdoc.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PDF/pdfgen.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PDF/pdfgeom.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PDF/pdfmetrics.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PDF/pdfutils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PDF/pidPDF.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pidPIL.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-10.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-10.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-12.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-12.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-14.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-14.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-18.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-18.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-24.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-24.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-8.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-8.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-8.pil.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-10.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-10.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-12.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-12.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-14.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-14.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-18.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-18.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-24.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-24.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-8.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-8.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-10.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-10.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-12.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-12.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-14.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-14.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-18.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-18.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-24.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-24.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-8.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-8.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-10.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-10.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-12.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-12.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-14.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-14.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-18.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-18.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-24.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-24.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-8.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-8.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/metrics.dat
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/removemedium.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-10.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-10.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-12.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-12.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-14.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-14.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-18.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-18.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-24.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-24.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-8.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-8.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-10.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-10.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-12.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-12.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-14.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-14.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-18.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-18.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-24.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-24.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-8.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-8.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-10.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-10.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-12.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-12.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-14.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-14.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-18.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-18.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-24.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-24.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-8.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-8.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PS
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PS/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PS/fontinfo.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PS/latin1MetricsCache.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PS/pidPS.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PS/psmetrics.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/Pyart
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/Pyart/Fontmapping.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/Pyart/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/Pyart/pidPyart.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/Qt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/Qt/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/Qt/pidQt.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/Qt/pidQt4.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/README
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/ReportLab
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/ReportLab/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/ReportLab/pidReportLab.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/SVG
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/SVG/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/SVG/pidSVG.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/TK
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/TK/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/TK/pidTK.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/WX
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/WX/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/WX/pidWX.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/WX/pidWxDc.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/colors.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/examples
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/examples/formatted-strings.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/examples/tkCanvas-with-scrollbars.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/examples/tkCanvasPIL-with-scrollbars.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/pagesizes.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/patches
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/patches/Imaging-1.1-fixplugin-path
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/patches/Imaging-1.1.1.diff
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/pid.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/stringformat.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/tests
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/tests/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/tests/pidtest.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/tests/pstests.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/tests/testallps.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/util
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/util/HTMLPiddler.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/util/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/utils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/12h.gif
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/cactvs.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/chemdraw.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/chemdraw_qax.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/chemutils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/comhack.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/fileutils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/listutils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/retest.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/spiral.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/test1.gif
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/test2.gif
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/test3.gif
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/BaseFeatures.fdef
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Crippen.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/DTDs
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/DTDs/RD_Dataset.dtd
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/DTDs/RD_Model.dtd
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/DTDs/validate.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/FragmentDescriptors.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/FunctionalGroups.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Functional_Group_Hierarchy.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/MolStandardize
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/MolStandardize/acid_base_pairs.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/MolStandardize/acid_base_pairs2.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/MolStandardize/fragmentPatterns.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/MolStandardize/normalizations.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/MolStandardize/tautomerTransforms.in
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/NCI
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/NCI/first_200.props.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/NCI/first_200.tpsa.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/NCI/first_5K.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/NCI/first_5k.tpsa.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Pains
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Pains/README.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Pains/test_data
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Pains/test_data/run_tests.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Pains/test_data/test_set3.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Pains/test_data/wehi_mols.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Pains/wehi_pains.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/RDData.sqlt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/RDTests.sqlt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Salts.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/SmartsLib
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/SmartsLib/RLewis_smarts.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/SmartsLib/patty_rules.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/SmartsLib/tests
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/SmartsLib/tests/bench2.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/SmartsLib/tests/fps.1000.counts.pkl.gz
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/SmartsLib/tests/mols.1000.pkl.gz
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/rddata.sql
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/struchk
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/struchk/checkfgs.chk
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/struchk/checkfgs.opt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/struchk/checkfgs.trn
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors/Correlations
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/DrugLikeT80_CorrMat.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/DrugLikeT80_Correlation.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/FragmentLikeT80_CorrMat.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/FragmentLikeT80_Correlation.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/LeadLikeT80_CorrMat.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/LeadLikeT80_Correlation.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/README
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/ForceField
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/ForceField/ForceFieldTerms.new.odt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/ForceField/UFF Parameters.ods
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/BackwardsIncompatibleChanges.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/CMakeLists.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/FindMyRDKit.cmake
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example1.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example10.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example11.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example12.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example13.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example14.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example15.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example16.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example2.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example3.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example4.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example5.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example6.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example7.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example8.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example9.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/Cartridge.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/Cookbook.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/GettingStartedInC++.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/GettingStartedInPython.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/Install.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/Makefile
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/Overview.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/RDKit_Book.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/api-docs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/5ht3ligs.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/AmideBond.rxn
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/MinimalFeatures.fdef
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/actives_5ht3.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/actives_5ht3.sdf.gz
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/bzr.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/bzr.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/cdk2.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/chiral.mol
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/input.mol
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/invalid.mol
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/s1p_chembldoc89753.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/solubility.test.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/solubility.train.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/exts
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/exts/extapi.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/cdk2_mol1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/cdk2_mol2.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/cdk2_molgrid.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/cdk2_molgrid_aligned.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/indole1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/mfp2_bit872.svg
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_10.jpg
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_10.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_11.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_12.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_2.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_3.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_4.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_5.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_6.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_7.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_8.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_9.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/rdk_bit1553.svg
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/rdk_bit1553_2.svg
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/similarity_map_charges.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/similarity_map_crippen.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/similarity_map_fp1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/similarity_map_fp2.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/similarity_map_fp3.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/similarity_map_rf.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/index.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/modules.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Avalon.pyAvalonTools.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Avalon.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.AllChem.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.Pairs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.Sheridan.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.Torsions.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.Utils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.BRICS.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.BuildFragmentCatalog.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.AlignDepict.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.BulkTester.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.DescriptorUtilities.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.SDFToCSV.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.TemplateExpand.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemicalFeatures.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemicalForceFields.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Crippen.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.DSViewer.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Descriptors.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Descriptors3D.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.IPythonConsole.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.MolDrawing.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.SimilarityMaps.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.aggCanvas.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.cairoCanvas.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.canvasbase.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.mplCanvas.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.qtCanvas.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.rdMolDraw2D.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.AtomTypes.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.EState.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.EState_VSA.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.Fingerprinter.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EnumerateHeterocycles.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EnumerateStereoisomers.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FastSDMolSupplier.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatFinderCLI.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.FeatMapParser.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.FeatMapPoint.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.FeatMapUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.FeatMaps.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Features.FeatDirUtilsRD.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Features.ShowFeats.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Features.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FilterCatalog.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.ClusterMols.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.DbFpSupplier.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.FingerprintMols.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.MolSimilarity.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.SimilarityScreener.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fraggle.FraggleSim.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fraggle.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FragmentCatalog.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FragmentMatcher.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fragments.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FunctionalGroups.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.GraphDescriptors.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Graphs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Lipinski.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MACCSkeys.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MCS.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolCatalog.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.FingerprintUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.Loader.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.Loader_orig.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.Loader_sa.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolKey.InchiInfo.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolKey.MolKey.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolKey.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolStandardize.rdMolStandardize.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolStandardize.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolSurf.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.PandasTools.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.PeriodicTable.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.Generate.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.Gobbi_Pharm2D.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.LazyGenerator.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.Matcher.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.SigFactory.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.Utils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm3D.EmbedLib.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm3D.ExcludedVolume.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm3D.Pharmacophore.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm3D.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.PropertyMol.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.PyMol.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.QED.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Randomize.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Recap.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ReducedGraphs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.SATIS.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.SaltRemover.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Scaffolds.MurckoScaffold.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Scaffolds.ScaffoldTree.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Scaffolds.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ShowMols.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.SimpleEnum.Enumerator.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.SimpleEnum.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.BuilderUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.SubshapeAligner.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.SubshapeBuilder.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.SubshapeObjects.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.testCombined.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Suppliers.DbMolSupplier.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Suppliers.MolSupplier.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Suppliers.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.TemplateAlign.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.TorsionFingerprints.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.fmcs.fmcs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.fmcs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.inchi.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdChemReactions.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdChemicalFeatures.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdCoordGen.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdDepictor.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdDistGeom.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdFMCS.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdFingerprintGenerator.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdForceFieldHelpers.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdFreeSASA.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMMPA.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolAlign.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolCatalog.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolChemicalFeatures.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolDescriptors.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolHash.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolInterchange.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolTransforms.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdPartialCharges.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdRGroupDecomposition.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdReducedGraphs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdSLNParse.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdShapeHelpers.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdStructChecker.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdSubstructLibrary.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdchem.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdfiltercatalog.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdfragcatalog.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdinchi.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdmolfiles.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdmolops.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdqueries.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdtrajectory.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataManip.Metric.rdMetricMatrixCalc.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataManip.Metric.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataManip.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.BitEnsemble.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.BitEnsembleDb.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.BitUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.HierarchyVis.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.LazySignature.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.TopNContainer.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.VectCollection.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.cDataStructs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbConnection.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbInfo.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbModule.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbReport.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbResultSet.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.StorageUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DistanceGeometry.DistGeom.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DistanceGeometry.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ForceField.rdForceField.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ForceField.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Geometry.rdGeometry.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Geometry.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.AnalyzeComposite.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.BuildComposite.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Butina.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.ClusterUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.ClusterVis.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Clustering.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Clusters.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Murtagh.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Resemblance.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Standardize.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Composite.AdjustComposite.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Composite.BayesComposite.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Composite.Composite.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Composite.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.CompositeRun.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.DataUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.FindQuantBounds.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.MLData.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.Quantize.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.SplitData.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.Stats.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.Transforms.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.BuildQuantTree.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.BuildSigTree.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.CrossValidate.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.DecTree.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.Forest.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.ID3.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.PruneTree.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.QuantTree.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.SigTree.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.Tree.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.TreeUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.TreeVis.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.randomtest.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.CompoundDescriptors.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.Descriptors.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.MoleculeDescriptors.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.Parser.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.EnrichPlot.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.GrowComposite.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.BitClusterer.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.BitRank.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.entropy.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.rdInfoTheory.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.CrossValidate.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.DistFunctions.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.KNNClassificationModel.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.KNNModel.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.KNNRegressionModel.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.MLUtils.VoteImg.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.MLUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.MatOps.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.ModelPackage.PackageUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.ModelPackage.Packager.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.ModelPackage.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.NaiveBayes.ClassificationModel.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.NaiveBayes.CrossValidate.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.NaiveBayes.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.ActFuncs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.CrossValidate.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.NetNode.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.Network.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.Trainers.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.SLT.Risk.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.SLT.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Scoring.Scoring.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Scoring.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.ScreenComposite.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.files.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Numerics.rdAlignment.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Numerics.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.RDConfig.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.RDLogger.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.RDPaths.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.RDRandom.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.SimDivFilters.SimilarityPickers.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.SimDivFilters.rdSimDivPickers.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.SimDivFilters.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.TestRunner.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.Filter.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.Node.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.DbMolSupply.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.DbPickleSupplier.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SDSupply.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmartsMolFilter.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmartsRemover.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmilesDupeFilter.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmilesOutput.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmilesSupply.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.demo.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.Output.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.Supply.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.Transform.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.rdBase.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.six.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.cactvs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.chemdraw.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.chemdraw_qax.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.chemutils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.comhack.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.fileutils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.listutils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.spiral.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/conf.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/An_overview_of_the_RDKit_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/Backwards_incompatible_changes_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/Getting_Started_with_RDKit_in_Python_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/Installation_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/Makefile
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/RDKit_cookbook_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/Supplementary_Text_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/The_RDKit_Book_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/The_RDKit_database_cartridge_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/conf.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/index.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/introduction_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_10.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_11.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_12.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_13.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_14.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_15.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_16.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_17.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_18.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_19.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_2.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_20.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_21.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_22.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_23.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_24.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_25.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_26.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_27.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_28.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_29.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_3.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_30.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_31.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_32.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_33.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_34.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_35.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_36.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_37.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_38.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_39.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_4.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_40.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_41.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_42.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_43.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_44.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_45.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_46.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_47.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_48.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_49.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_5.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_50.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_51.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_52.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_53.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_54.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_55.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_56.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_57.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_58.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_59.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_6.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_60.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_61.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_62.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_7.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_8.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_9.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/terminology_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/Chem
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/Chem/FragmentCatalogs.html
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/Chem/Pharm2D.signatures.ai
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/Chem/Pharm2D.signatures.jpg
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/Chem/Pharm2D.triangles.ai
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/Chem/Pharm2D.triangles.jpg
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/CodingStandards.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/EnhancedStereo.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/SGroups.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_abs_and_base.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_abs_and_expand.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_abs_or_base.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_and2_base.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_and2_expand.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_cis_base.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_cis_expand.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_trans_base.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_trans_expand.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_or1_cis_base.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_or1_or2_base.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_or1_trans_base.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Images
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Images/logo.ai
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Images/logo.inkscape.svg
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Images/logo.lrg.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Images/logo.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Images/logo_plain.inkscape.svg
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Images/logo_plain.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Images/wiki
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Images/wiki/morganfp_atomenv1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/FingerprintGenerators.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/MolStandardize.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-DummyCores.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-GenericCores.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-MutipleCores.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-RingSubstitution.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-StereoChemTest.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-example-lactam.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/compounds.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/RD.css
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/AtomAtomSimilarity
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/AtomAtomSimilarity/AtomAtomPathSimilarity.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CMakeLists.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ChiralPairs
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ChiralPairs/ChiralDescriptors.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ChiralPairs/README.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/CMakeLists.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/ConformerParser.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/ConformerParser.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/Wrap
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/Wrap/CMakeLists.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/Wrap/rdConformerParser.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/Wrap/testConformerParser.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/Wrap/test_list.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/test.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/test_list.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/README.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/cdk2.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/centroid.tsv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/clustered.tsv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/clustered_parse.tsv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/fastcluster.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/fp.tsv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/testdata
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/testdata/cdk2.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/testdata/converted.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/testdata/sdf2smi.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Glare
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Glare/README.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Glare/glare.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/IFG
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/IFG/README
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/IFG/ifg.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/LEF
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/LEF/AddLabels.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/LEF/ClusterFps.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/LEF/CreateFps.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/LEF/DistancePlot.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/LEF/DistancePredict.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/LEF/README.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/M_Kossner
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/M_Kossner/BaseFeatures_DIP2_NoMicrospecies.fdef
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/M_Kossner/Frames.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/M_Kossner/README
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/MolVS
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/MolVS/molvs_cli.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/NP_Score
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/NP_Score/README
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/NP_Score/npscorer.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/NP_Score/publicnp.model.gz
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF/Makefile
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF/PBFRDKit.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF/PBFRDKit.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF/README
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF/demo.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF/pbf.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF/testData
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF/testData/egfr.out
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF/testData/egfr.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/RxnRoleAssignment
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/RxnRoleAssignment/README.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/RxnRoleAssignment/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/RxnRoleAssignment/identifyReactants.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/RxnRoleAssignment/utils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/SA_Score
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/SA_Score/README
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/SA_Score/UnitTestSAScore.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/SA_Score/data
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/SA_Score/data/zim.100.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/SA_Score/fpscores.pkl.gz
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/SA_Score/sascorer.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/atomcontrib.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/cxn_tversky.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/data
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/data/ChEMBL_11265_actives.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/data/final_fraggle_results.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/data/fragmentation_tversky_out
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/data/query.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/data/query_fragmentation.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/fraggle.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/rdkit_tversky.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/readme.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/README.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/cansmirk.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/create_mmp_db.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_cansmirks.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_input_smi.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_input_subs.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_input_subs_smarts.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_input_trans.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_input_trans_smarts.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_search_smi_output.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_search_subs_output.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_search_subs_smart_output.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_search_trans_output.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_search_trans_smarts_output.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_fragmented.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_mmps_default.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_mmps_maxheavy.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_mmps_maxratio.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_mmps_sym.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_mmps_sym_maxheavy.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_mol_trans_output.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_smiles_mol_trans.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_smirks.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_smirks_mol_trans.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_transfroms.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/simple.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/indexing.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/mol_transform.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/rfrag.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/search_mmp_db.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/test_list.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/test_rfrag.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/pzc
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/pzc/p_con.html
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/pzc/p_con.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/pzc/readme.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/CreateDb.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/SearchDb.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/TestDbCLI.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/moe_like.dsc
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/README
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr.2.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr_q1.mol
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/pubchem.200.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Scripts
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Scripts/FeatFinderCLI.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Scripts/PythonFormat.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Scripts/README.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Scripts/create_deb_packages.sh
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Scripts/test.sh
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/README
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/license.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/templates.mae
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/CoordGen.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdCoordGen.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDGeneral.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDGeneral.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDGeneral.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/Exceptions.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/BadFileException.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/BoostStartInclude.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/BoostEndInclude.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/Dict.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/FileParseException.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/Invariant.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/RDAny.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/RDValue.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/RDValue-doublemagic.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/RDValue-taggedunion.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/RDLog.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/RDProps.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/RDThreads.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/StreamOps.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/types.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/utils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/versions.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/RDConfig.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/LocaleSwitcher.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/Ranking.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/hanoiSort.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/export.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/test.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/hash/hash
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/hash/hash/detail
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/hash/hash/detail/float_functions.hpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/hash/hash/detail/hash_float.hpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/hash/hash/extensions.hpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/hash/hash/hash.hpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/hash/hash/hash_fwd.hpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDBoost.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDBoost.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDBoost.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDBoost/Wrap.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDBoost/PySequenceHolder.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDBoost/list_indexing_suite.hpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDBoost/python.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDBoost/boost_numpy.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDBoost/python_streambuf.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/rdBase.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDStreams.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDStreams.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDStreams.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDStreams/streams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDataStructs.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDataStructs.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDataStructs.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/base64.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/BitOps.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/BitVect.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/BitVects.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/BitVectUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/DatastructsException.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/DatastructsStreamOps.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/DiscreteDistMat.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/DiscreteValueVect.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/ExplicitBitVect.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/SparseBitVect.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/SparseIntVect.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/FPBReader.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/MultiFPBReader.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataStructs/cDataStructs.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDGeometryLib.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDGeometryLib.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDGeometryLib.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Geometry/Grid3D.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Geometry/GridUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Geometry/point.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Geometry/Transform2D.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Geometry/Transform3D.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Geometry/Transform.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Geometry/UniformGrid3D.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Geometry/Utils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Geometry/rdGeometry.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Numerics/Matrix.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Numerics/SquareMatrix.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Numerics/SymmMatrix.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Numerics/Vector.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Numerics/Conrec.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitAlignment.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitAlignment.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitAlignment.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Numerics/Alignment/AlignPoints.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Numerics/rdAlignment.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitEigenSolvers.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitEigenSolvers.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitEigenSolvers.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Numerics/EigenSolvers/PowerEigenSolver.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitOptimizer.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitOptimizer.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitOptimizer.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Numerics/Optimizer/BFGSOpt.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitForceField.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitForceField.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitForceField.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/Contrib.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/ForceField.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/AngleBend.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/BondStretch.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/Contribs.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/DistanceConstraint.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/AngleConstraint.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/TorsionConstraint.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/PositionConstraint.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/Nonbonded.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/Params.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/Inversion.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/TorsionAngle.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/AngleBend.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/BondStretch.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/StretchBend.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/OopBend.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/TorsionAngle.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/Nonbonded.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/Contribs.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/DistanceConstraint.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/AngleConstraint.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/TorsionConstraint.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/PositionConstraint.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/Params.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ForceField/rdForceField.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDistGeometry.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDistGeometry.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDistGeometry.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DistGeom/BoundsMatrix.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DistGeom/ChiralSet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DistGeom/ChiralViolationContrib.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DistGeom/DistGeomUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DistGeom/DistViolationContrib.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DistGeom/FourthDimContrib.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DistGeom/TriangleSmooth.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DistanceGeometry/DistGeom.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitCatalogs.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitCatalogs.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitCatalogs.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Catalogs/CatalogEntry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Catalogs/Catalog.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Catalogs/CatalogParams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitGraphMol.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitGraphMol.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitGraphMol.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Atom.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/atomic_data.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/AtomIterators.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Bond.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/BondIterators.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Canon.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Chirality.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Conformer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/details.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/GraphMol.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolOps.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolPickler.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/PeriodicTable.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/QueryAtom.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/QueryBond.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/QueryOps.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/RDKitBase.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/RDKitQueries.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Resonance.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/RingInfo.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Rings.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ROMol.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/RWMol.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SanitException.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SubstanceGroup.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/StereoGroup.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MonomerInfo.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/new_canon.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolBundle.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDepictor.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDepictor.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDepictor.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Depictor/DepictUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Depictor/EmbeddedFrag.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Depictor/RDDepictor.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdDepictor.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSmilesParse.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSmilesParse.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSmilesParse.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SmilesParse/primes.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SmilesParse/SmartsWrite.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SmilesParse/SmilesParse.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SmilesParse/SmilesParseOps.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SmilesParse/SmilesWrite.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFileParsers.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFileParsers.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFileParsers.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/FileParsers.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/FileParserUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/MolFileStereochem.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/MolSupplier.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/MolWriters.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/SequenceParsers.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/SequenceWriters.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSubstructMatch.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSubstructMatch.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSubstructMatch.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Substruct/SubstructMatch.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Substruct/SubstructUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitChemReactions.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitChemReactions.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitChemReactions.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/Reaction.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/ReactionParser.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/ReactionPickler.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/ReactionFingerprints.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/ReactionUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/ReactionRunner.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/PreprocessRxn.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/SanitizeRxn.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/Enumerate.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/EnumerateBase.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/EnumerationPickler.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/EnumerationStrategyBase.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/CartesianProduct.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/RandomSample.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/RandomSampleAllBBs.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdChemReactions.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitChemTransforms.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitChemTransforms.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitChemTransforms.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemTransforms/ChemTransforms.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemTransforms/MolFragmenter.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSubgraphs.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSubgraphs.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSubgraphs.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Subgraphs/Subgraphs.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Subgraphs/SubgraphUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFilterCatalog.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFilterCatalog.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFilterCatalog.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FilterCatalog/FilterCatalogEntry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FilterCatalog/FilterCatalog.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FilterCatalog/FilterMatcherBase.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FilterCatalog/FilterMatchers.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FilterCatalog/FunctionalGroupHierarchy.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdfiltercatalog.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFragCatalog.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFragCatalog.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFragCatalog.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FragCatalog/FragCatalogEntry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FragCatalog/FragCatalogUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FragCatalog/FragCatGenerator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FragCatalog/FragCatParams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FragCatalog/FragFPGenerator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdfragcatalog.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDescriptors.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDescriptors.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDescriptors.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/Crippen.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/Lipinski.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/MolDescriptors.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/MolSurf.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/ConnectivityDescriptors.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/MQN.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/RegisterDescriptor.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/Property.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/AUTOCORR2D.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/Data3Ddescriptors.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/MolData3Ddescriptors.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/USRDescriptor.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdMolDescriptors.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFingerprints.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFingerprints.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFingerprints.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/AtomPairs.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/Fingerprints.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/MorganFingerprints.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/MACCS.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/FingerprintGenerator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/AtomPairGenerator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/MorganGenerator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/RDKitFPGenerator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/TopologicalTorsionGenerator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/FingerprintUtil.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdFingerprintGenerator.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitPartialCharges.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitPartialCharges.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitPartialCharges.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/PartialCharges/GasteigerCharges.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/PartialCharges/GasteigerParams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdPartialCharges.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolTransforms.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolTransforms.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolTransforms.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolTransforms/MolTransforms.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdMolTransforms.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitForceFieldHelpers.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitForceFieldHelpers.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitForceFieldHelpers.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/FFConvenience.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/UFF/AtomTyper.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/UFF/Builder.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/UFF/UFF.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/MMFF/AtomTyper.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/MMFF/Builder.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/MMFF/MMFF.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/CrystalFF/TorsionAngleM6.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdForceFieldHelpers.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDistGeomHelpers.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDistGeomHelpers.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDistGeomHelpers.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/DistGeomHelpers/Embedder.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdDistGeom.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolAlign.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolAlign.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolAlign.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolAlign/AlignMolecules.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolAlign/O3AAlignMolecules.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdMolAlign.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolChemicalFeatures.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolChemicalFeatures.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolChemicalFeatures.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolChemicalFeatures/FeatureParser.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolChemicalFeatures/MolChemicalFeatureFactory.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolChemicalFeatures/MolChemicalFeature.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdMolChemicalFeatures.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitShapeHelpers.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitShapeHelpers.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitShapeHelpers.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ShapeHelpers/ShapeEncoder.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ShapeHelpers/ShapeUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdShapeHelpers.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolCatalog.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolCatalog.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolCatalog.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolCatalog/MolCatalogEntry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolCatalog/MolCatalog.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolCatalog/MolCatalogParams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdMolCatalog.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2D.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2DSVG.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2Dwx.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2DUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2DDetails.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolDraw2D.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolDraw2D.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolDraw2D.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/rdMolDraw2D.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFMCS.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFMCS.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFMCS.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FMCS/FMCS.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FMCS/Graph.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FMCS/Seed.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FMCS/SeedSet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FMCS/MatchTable.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FMCS/RingMatchTableSet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FMCS/SubstructureCache.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FMCS/SubstructMatchCustom.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FMCS/MaximumCommonSubgraph.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdFMCS.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolHash.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolHash.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolHash.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolHash/MolHash.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolHash/nmmolhash.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdMolHash.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMMPA.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMMPA.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMMPA.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MMPA/MMPA.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdMMPA.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitStructChecker.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitStructChecker.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitStructChecker.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/StructChecker/StructChecker.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/StructChecker/Utilites.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/StructChecker/Pattern.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/StructChecker/Stereo.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/StructChecker/StripSmallFragments.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/StructChecker/ReCharge.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/StructChecker/Tautomer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdStructChecker.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitReducedGraphs.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitReducedGraphs.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitReducedGraphs.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ReducedGraphs/ReducedGraphs.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdReducedGraphs.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitTrajectory.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitTrajectory.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitTrajectory.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Trajectory/Snapshot.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Trajectory/Trajectory.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSubstructLibrary.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSubstructLibrary.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSubstructLibrary.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SubstructLibrary/SubstructLibrary.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SubstructLibrary/SubstructLibrarySerialization.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdSubstructLibrary.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRGroupDecomposition.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRGroupDecomposition.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRGroupDecomposition.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/RGroupDecomposition/RGroupDecomp.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdRGroupDecomposition.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolInterchange.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolInterchange.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolInterchange.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolInterchange/MolInterchange.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolInterchange/details.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdMolInterchange.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSLNParse.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSLNParse.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSLNParse.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SLNParse/SLNAttribs.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SLNParse/SLNParse.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SLNParse/SLNParseOps.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdSLNParse.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdchem.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdmolops.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdqueries.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdmolfiles.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdtrajectory.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolStandardize.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolStandardize.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolStandardize.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/MolStandardize.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Metal.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Normalize.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Validate.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Charge.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Tautomer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Fragment.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/FragmentCatalogEntry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/FragmentCatalogParams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/FragmentCatalogUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/AcidBaseCatalogEntry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/AcidBaseCatalogParams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/AcidBaseCatalogUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TransformCatalogEntry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TransformCatalogParams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TransformCatalogUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TautomerCatalogEntry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TautomerCatalogParams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TautomerCatalogUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/rdMolStandardize.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/AndQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/EqualityQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/GreaterEqualQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/GreaterQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/LessEqualQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/LessQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/NullQueryAlgebra.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/OrQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/Query.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/QueryObjects.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/RangeQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/SetQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/XOrQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Features/Feature.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataManip/MetricMatrixCalc/MetricFuncs.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataManip/MetricMatrixCalc/MetricMatrixCalc.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataManip/Metric/rdMetricMatrixCalc.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSimDivPickers.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSimDivPickers.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSimDivPickers.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/SimDivPickers/DistPicker.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/SimDivPickers/LeaderPicker.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/SimDivPickers/HierarchicalClusterPicker.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/SimDivPickers/MaxMinPicker.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/SimDivFilters/rdSimDivPickers.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKithc.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKithc.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKithc.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Cluster/Clustering.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitInfoTheory.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitInfoTheory.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitInfoTheory.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/InfoTheory/rdInfoTheory.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Data/cQuantize.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitChemicalFeatures.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitChemicalFeatures.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitChemicalFeatures.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ChemicalFeatures/ChemicalFeature.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ChemicalFeatures/FreeChemicalFeature.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdChemicalFeatures.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/RDPaths.py
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   debian/rules override_dh_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
ln -sf /usr/share/fonts/truetype/freefont/FreeSans.ttf /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/FreeSans.ttf
dh_install -ppython3-rdkit /usr/lib/python3
dh_install: warning: Compatibility levels before 10 are deprecated (level 9 in use)
rm -f -rf /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/docs/
rm -f -rf /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/__pycache__
dh_numpy3
dh_install --list-missing
dh_install: warning: Compatibility levels before 10 are deprecated (level 9 in use)
dh_install: warning: Please use dh_missing --list-missing/--fail-missing instead
dh_install: warning: This feature will be removed in compat 12.
dh_missing: warning: usr/lib/cmake/rdkit/rdkit-targets.cmake exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/cmake/rdkit/rdkit-targets-none.cmake exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/cmake/rdkit/rdkit-config.cmake exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/cmake/rdkit/rdkit-config-version.cmake exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/README exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/license.txt exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/RD.css exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/DrugLikeT80_CorrMat.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/DrugLikeT80_Correlation.csv exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/FragmentLikeT80_CorrMat.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/FragmentLikeT80_Correlation.csv exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/LeadLikeT80_CorrMat.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/LeadLikeT80_Correlation.csv exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/README exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Analysis/ForceField/ForceFieldTerms.new.odt exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Analysis/ForceField/UFF Parameters.ods exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/BackwardsIncompatibleChanges.md exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/Cartridge.md exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/Cookbook.md exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/GettingStartedInC++.md exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/GettingStartedInPython.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/Install.md exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/Makefile exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/Overview.md exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/RDKit_Book.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/api-docs.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/index.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/conf.py exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/CMakeLists.txt exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/FindMyRDKit.cmake exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example1.cpp exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example10.cpp exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example11.cpp exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example12.cpp exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example13.cpp exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example14.cpp exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example15.cpp exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example16.cpp exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example2.cpp exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example3.cpp exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example4.cpp exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example5.cpp exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example6.cpp exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example7.cpp exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example8.cpp exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example9.cpp exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/data/5ht3ligs.sdf exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/data/AmideBond.rxn exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/data/MinimalFeatures.fdef exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/data/actives_5ht3.sdf exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/data/actives_5ht3.sdf.gz exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/data/bzr.sdf exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/data/bzr.smi exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/data/cdk2.sdf exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/data/chiral.mol exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/data/input.mol exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/data/invalid.mol exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/data/s1p_chembldoc89753.txt exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/data/solubility.test.sdf exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/data/solubility.train.sdf exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/exts/extapi.py exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/images/cdk2_mol1.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/images/cdk2_mol2.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/images/cdk2_molgrid.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/images/cdk2_molgrid_aligned.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/images/indole1.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/images/mfp2_bit872.svg exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/images/picture_0.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/images/picture_1.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/images/picture_10.jpg exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/images/picture_10.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/images/picture_11.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/images/picture_12.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/images/picture_2.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/images/picture_3.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/images/picture_4.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/images/picture_5.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/images/picture_6.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/images/picture_7.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/images/picture_8.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/images/picture_9.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/images/rdk_bit1553.svg exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/images/rdk_bit1553_2.svg exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/images/similarity_map_charges.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/images/similarity_map_crippen.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/images/similarity_map_fp1.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/images/similarity_map_fp2.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/images/similarity_map_fp3.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/images/similarity_map_rf.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/modules.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Avalon.pyAvalonTools.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Avalon.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.AllChem.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.Pairs.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.Sheridan.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.Torsions.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.Utils.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.BRICS.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.BuildFragmentCatalog.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.AlignDepict.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.BulkTester.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.DescriptorUtilities.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.SDFToCSV.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.TemplateExpand.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemicalFeatures.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemicalForceFields.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Crippen.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.DSViewer.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Descriptors.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Descriptors3D.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.IPythonConsole.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.MolDrawing.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.SimilarityMaps.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.aggCanvas.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.cairoCanvas.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.canvasbase.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.mplCanvas.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.qtCanvas.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.rdMolDraw2D.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.AtomTypes.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.EState.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.EState_VSA.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.Fingerprinter.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.EnumerateHeterocycles.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.EnumerateStereoisomers.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.FastSDMolSupplier.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatFinderCLI.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.FeatMapParser.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.FeatMapPoint.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.FeatMapUtils.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.FeatMaps.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Features.FeatDirUtilsRD.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Features.ShowFeats.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Features.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.FilterCatalog.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.ClusterMols.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.DbFpSupplier.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.FingerprintMols.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.MolSimilarity.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.SimilarityScreener.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fraggle.FraggleSim.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fraggle.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.FragmentCatalog.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.FragmentMatcher.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fragments.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.FunctionalGroups.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.GraphDescriptors.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Graphs.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Lipinski.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.MACCSkeys.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.MCS.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolCatalog.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.FingerprintUtils.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.Loader.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.Loader_orig.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.Loader_sa.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolKey.InchiInfo.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolKey.MolKey.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolKey.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolStandardize.rdMolStandardize.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolStandardize.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolSurf.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.PandasTools.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.PeriodicTable.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.Generate.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.Gobbi_Pharm2D.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.LazyGenerator.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.Matcher.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.SigFactory.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.Utils.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm3D.EmbedLib.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm3D.ExcludedVolume.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm3D.Pharmacophore.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm3D.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.PropertyMol.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.PyMol.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.QED.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Randomize.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Recap.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.ReducedGraphs.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.SATIS.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.SaltRemover.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Scaffolds.MurckoScaffold.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Scaffolds.ScaffoldTree.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Scaffolds.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.ShowMols.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.SimpleEnum.Enumerator.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.SimpleEnum.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.BuilderUtils.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.SubshapeAligner.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.SubshapeBuilder.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.SubshapeObjects.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.testCombined.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Suppliers.DbMolSupplier.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Suppliers.MolSupplier.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Suppliers.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.TemplateAlign.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.TorsionFingerprints.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.fmcs.fmcs.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.fmcs.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.inchi.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdChemReactions.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdChemicalFeatures.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdCoordGen.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdDepictor.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdDistGeom.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdFMCS.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdFingerprintGenerator.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdForceFieldHelpers.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdFreeSASA.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMMPA.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolAlign.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolCatalog.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolChemicalFeatures.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolDescriptors.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolHash.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolInterchange.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolTransforms.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdPartialCharges.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdRGroupDecomposition.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdReducedGraphs.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdSLNParse.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdShapeHelpers.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdStructChecker.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdSubstructLibrary.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdchem.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdfiltercatalog.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdfragcatalog.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdinchi.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdmolfiles.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdmolops.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdqueries.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdtrajectory.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.DataManip.Metric.rdMetricMatrixCalc.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.DataManip.Metric.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.DataManip.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.BitEnsemble.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.BitEnsembleDb.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.BitUtils.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.HierarchyVis.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.LazySignature.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.TopNContainer.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.VectCollection.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.cDataStructs.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbConnection.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbInfo.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbModule.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbReport.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbResultSet.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbUtils.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Dbase.StorageUtils.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Dbase.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.DistanceGeometry.DistGeom.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.DistanceGeometry.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ForceField.rdForceField.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ForceField.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Geometry.rdGeometry.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Geometry.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.AnalyzeComposite.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.BuildComposite.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Butina.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.ClusterUtils.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.ClusterVis.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Clustering.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Clusters.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Murtagh.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Resemblance.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Standardize.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Composite.AdjustComposite.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Composite.BayesComposite.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Composite.Composite.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Composite.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.CompositeRun.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.DataUtils.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.FindQuantBounds.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.MLData.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.Quantize.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.SplitData.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.Stats.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.Transforms.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.BuildQuantTree.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.BuildSigTree.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.CrossValidate.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.DecTree.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.Forest.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.ID3.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.PruneTree.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.QuantTree.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.SigTree.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.Tree.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.TreeUtils.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.TreeVis.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.randomtest.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.CompoundDescriptors.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.Descriptors.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.MoleculeDescriptors.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.Parser.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.EnrichPlot.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.GrowComposite.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.BitClusterer.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.BitRank.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.entropy.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.rdInfoTheory.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.CrossValidate.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.DistFunctions.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.KNNClassificationModel.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.KNNModel.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.KNNRegressionModel.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.MLUtils.VoteImg.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.MLUtils.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.MatOps.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.ModelPackage.PackageUtils.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.ModelPackage.Packager.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.ModelPackage.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.NaiveBayes.ClassificationModel.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.NaiveBayes.CrossValidate.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.NaiveBayes.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.ActFuncs.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.CrossValidate.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.NetNode.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.Network.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.Trainers.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.SLT.Risk.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.SLT.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Scoring.Scoring.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.Scoring.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.ScreenComposite.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.files.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.ML.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Numerics.rdAlignment.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.Numerics.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.RDConfig.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.RDLogger.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.RDPaths.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.RDRandom.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.SimDivFilters.SimilarityPickers.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.SimDivFilters.rdSimDivPickers.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.SimDivFilters.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.TestRunner.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.VLib.Filter.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.VLib.Node.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.DbMolSupply.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.DbPickleSupplier.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SDSupply.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmartsMolFilter.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmartsRemover.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmilesDupeFilter.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmilesOutput.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmilesSupply.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.demo.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.VLib.Output.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.VLib.Supply.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.VLib.Transform.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.VLib.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.rdBase.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.six.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.utils.cactvs.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.utils.chemdraw.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.utils.chemdraw_qax.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.utils.chemutils.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.utils.comhack.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.utils.fileutils.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.utils.listutils.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.utils.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/source/rdkit.utils.spiral.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/An_overview_of_the_RDKit_jp.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/Backwards_incompatible_changes_jp.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/Getting_Started_with_RDKit_in_Python_jp.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/Installation_jp.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/Makefile exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/RDKit_cookbook_jp.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/Supplementary_Text_jp.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/The_RDKit_Book_jp.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/The_RDKit_database_cartridge_jp.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/conf.py exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/index.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/introduction_jp.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/terminology_jp.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_1.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_10.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_11.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_12.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_13.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_14.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_15.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_16.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_17.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_18.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_19.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_2.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_20.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_21.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_22.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_23.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_24.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_25.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_26.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_27.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_28.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_29.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_3.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_30.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_31.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_32.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_33.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_34.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_35.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_36.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_37.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_38.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_39.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_4.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_40.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_41.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_42.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_43.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_44.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_45.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_46.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_47.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_48.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_49.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_5.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_50.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_51.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_52.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_53.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_54.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_55.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_56.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_57.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_58.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_59.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_6.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_60.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_61.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_62.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_7.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_8.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_9.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/CodingStandards.md exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/EnhancedStereo.md exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/SGroups.md exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/Chem/FragmentCatalogs.html exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/Chem/Pharm2D.signatures.ai exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/Chem/Pharm2D.signatures.jpg exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/Chem/Pharm2D.triangles.ai exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/Chem/Pharm2D.triangles.jpg exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_abs_and_base.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_abs_and_expand.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_abs_or_base.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_and2_base.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_and2_expand.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_cis_base.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_cis_expand.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_trans_base.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_trans_expand.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_or1_cis_base.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_or1_or2_base.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_or1_trans_base.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Images/logo.ai exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Images/logo.inkscape.svg exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Images/logo.lrg.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Images/logo.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Images/logo_plain.inkscape.svg exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Images/logo_plain.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Images/wiki/morganfp_atomenv1.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/FingerprintGenerators.ipynb exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/MolStandardize.ipynb exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-DummyCores.ipynb exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-GenericCores.ipynb exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-MutipleCores.ipynb exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-RingSubstitution.ipynb exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-StereoChemTest.ipynb exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-example-lactam.ipynb exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/compounds.txt exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Scripts/FeatFinderCLI.py exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Scripts/PythonFormat.py exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Scripts/README.md exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Scripts/create_deb_packages.sh exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Scripts/test.sh exists in debian/tmp but is not installed to anywhere
	The following debhelper tools have reported what they installed (with files per package)
	 * dh_install: librdkit-dev (48), librdkit1 (94), postgresql-12-rdkit (0), python3-rdkit (1), rdkit-data (3), rdkit-doc (0)
	If the missing files are installed by another tool, please file a bug against it.
	When filing the report, if the tool is not part of debhelper itself, please reference the
	"Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+).
	  (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz)
	Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built
	For a short-term work-around: Add the files to debian/not-installed
mkdir -p /<<PKGBUILDDIR>>/debian/rdkit-doc/usr/share/doc/rdkit/
cp /<<PKGBUILDDIR>>/Docs/Book/_build/latex/RDKit.pdf /<<PKGBUILDDIR>>/debian/rdkit-doc/usr/share/doc/rdkit/
cp -a /<<PKGBUILDDIR>>/Docs/Book/_build/html /<<PKGBUILDDIR>>/debian/rdkit-doc/usr/share/doc/rdkit/
pg_buildext install /<<PKGBUILDDIR>>/Code/PgSQL/rdkit build-%v postgresql-%v-rdkit
supported-versions: WARNING! Unknown distribution: raspbian
debian found in ID_LIKE, treating as Debian
### install 12 ###
make[2]: Entering directory '/<<PKGBUILDDIR>>/build-12'
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib'
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/share/postgresql/12/extension'
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/share/postgresql/12/extension'
/usr/bin/install -c -m 755  rdkit.so '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib/rdkit.so'
/usr/bin/install -c -m 644 /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit.control '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/share/postgresql/12/extension/'
/usr/bin/install -c -m 644  rdkit--3.8.sql '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/share/postgresql/12/extension/'
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib/bitcode/rdkit'
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib/bitcode'/rdkit/
/usr/bin/install -c -m 644 rdkit_io.bc '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 mol_op.bc '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 bfp_op.bc '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 sfp_op.bc '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 rxn_op.bc '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 rdkit_gist.bc '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 bfp_gist.bc '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 bfp_gin.bc '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 low_gist.bc '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 guc.bc '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 cache.bc '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 adapter.bc '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 bitstring.bc '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib/bitcode'/rdkit/./
cd '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib/bitcode' && /usr/lib/llvm-10/bin/llvm-lto -thinlto -thinlto-action=thinlink -o rdkit.index.bc rdkit/rdkit_io.bc rdkit/mol_op.bc rdkit/bfp_op.bc rdkit/sfp_op.bc rdkit/rxn_op.bc rdkit/rdkit_gist.bc rdkit/bfp_gist.bc rdkit/bfp_gin.bc rdkit/low_gist.bc rdkit/guc.bc rdkit/cache.bc rdkit/adapter.bc rdkit/bitstring.bc
make[2]: Leaving directory '/<<PKGBUILDDIR>>/build-12'
ln -sf /usr/share/javascript/jquery/jquery.js /<<PKGBUILDDIR>>/debian/rdkit-doc/usr/share/doc/rdkit//html/cppapi/jquery.js
ln -sf /usr/share/javascript/jquery/jquery.js /<<PKGBUILDDIR>>/debian/rdkit-doc/usr/share/doc/rdkit//html/_static/jquery.js
ln -sf /usr/share/javascript/underscore/underscore.js /<<PKGBUILDDIR>>/debian/rdkit-doc/usr/share/doc/rdkit//html/_static/underscore.js
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_installdocs -a -O--buildsystem=cmake -O--parallel
dh_installdocs: warning: Compatibility levels before 10 are deprecated (level 9 in use)
   debian/rules override_dh_installchangelogs
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_installchangelogs ReleaseNotes.md
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   debian/rules override_dh_python3
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_python3 -ppython3-rdkit
I: dh_python3 fs:343: renaming rdBase.so to rdBase.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdChemReactions.so to rdChemReactions.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdChemicalFeatures.so to rdChemicalFeatures.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdCoordGen.so to rdCoordGen.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdDepictor.so to rdDepictor.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdDistGeom.so to rdDistGeom.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdFMCS.so to rdFMCS.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdFingerprintGenerator.so to rdFingerprintGenerator.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdForceFieldHelpers.so to rdForceFieldHelpers.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdMMPA.so to rdMMPA.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdMolAlign.so to rdMolAlign.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdMolCatalog.so to rdMolCatalog.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdMolChemicalFeatures.so to rdMolChemicalFeatures.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdMolDescriptors.so to rdMolDescriptors.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdMolHash.so to rdMolHash.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdMolInterchange.so to rdMolInterchange.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdMolTransforms.so to rdMolTransforms.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdPartialCharges.so to rdPartialCharges.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdRGroupDecomposition.so to rdRGroupDecomposition.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdReducedGraphs.so to rdReducedGraphs.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdSLNParse.so to rdSLNParse.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdShapeHelpers.so to rdShapeHelpers.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdStructChecker.so to rdStructChecker.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdSubstructLibrary.so to rdSubstructLibrary.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdchem.so to rdchem.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdfiltercatalog.so to rdfiltercatalog.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdfragcatalog.so to rdfragcatalog.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdmolfiles.so to rdmolfiles.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdmolops.so to rdmolops.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdqueries.so to rdqueries.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdtrajectory.so to rdtrajectory.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdMolDraw2D.so to rdMolDraw2D.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdMolStandardize.so to rdMolStandardize.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdMetricMatrixCalc.so to rdMetricMatrixCalc.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming cDataStructs.so to cDataStructs.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming DistGeom.so to DistGeom.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdForceField.so to rdForceField.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdGeometry.so to rdGeometry.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming Clustering.so to Clustering.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming cQuantize.so to cQuantize.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdInfoTheory.so to rdInfoTheory.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdAlignment.so to rdAlignment.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdSimDivPickers.so to rdSimDivPickers.cpython-38-arm-linux-gnueabihf.so
dh_numpy3 -ppython3-rdkit
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_installinit -a -O--buildsystem=cmake -O--parallel
dh_installinit: warning: Compatibility levels before 10 are deprecated (level 9 in use)
   dh_lintian -a -O--buildsystem=cmake -O--parallel
dh_lintian: warning: Compatibility levels before 10 are deprecated (level 9 in use)
   dh_perl -a -O--buildsystem=cmake -O--parallel
   dh_link -a -O--buildsystem=cmake -O--parallel
   dh_strip_nondeterminism -a -O--buildsystem=cmake -O--parallel
   dh_compress -a -O--buildsystem=cmake -O--parallel
dh_compress: warning: Compatibility levels before 10 are deprecated (level 9 in use)
dh_compress: warning: Compatibility levels before 10 are deprecated (level 9 in use)
dh_compress: warning: Compatibility levels before 10 are deprecated (level 9 in use)
dh_compress: warning: Compatibility levels before 10 are deprecated (level 9 in use)
   dh_fixperms -a -O--buildsystem=cmake -O--parallel
   dh_missing -a -O--buildsystem=cmake -O--parallel
dh_missing: warning: Compatibility levels before 10 are deprecated (level 9 in use)
   dh_strip -a -O--buildsystem=cmake -O--parallel
dh_strip: warning: Compatibility levels before 10 are deprecated (level 9 in use)
dh_strip: warning: Compatibility levels before 10 are deprecated (level 9 in use)
dh_strip: warning: Compatibility levels before 10 are deprecated (level 9 in use)
dh_strip: warning: Compatibility levels before 10 are deprecated (level 9 in use)
   dh_makeshlibs -a -O--buildsystem=cmake -O--parallel
dh_makeshlibs: warning: Compatibility levels before 10 are deprecated (level 9 in use)
   dh_shlibdeps -a -O--buildsystem=cmake -O--parallel
dh_shlibdeps: warning: Compatibility levels before 10 are deprecated (level 9 in use)
dh_shlibdeps: warning: Compatibility levels before 10 are deprecated (level 9 in use)
dh_shlibdeps: warning: Compatibility levels before 10 are deprecated (level 9 in use)
dh_shlibdeps: warning: Compatibility levels before 10 are deprecated (level 9 in use)
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitAlignment.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitFragCatalog.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitEigenSolvers.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitDepictor.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitForceField.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitRGroupDecomposition.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitDescriptors.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolCatalog.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitRDGeneral.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolChemicalFeatures.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitSubstructLibrary.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitShapeHelpers.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolTransforms.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitDataStructs.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitChemTransforms.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitSubstructMatch.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitSLNParse.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitFingerprints.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitDistGeometry.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitTrajectory.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitCatalogs.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitFileParsers.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitDistGeomHelpers.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolAlign.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitForceFieldHelpers.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolDraw2D.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitChemicalFeatures.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolInterchange.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolHash.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitSubgraphs.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitChemReactions.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolStandardize.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitFMCS.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitRDGeometryLib.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitStructChecker.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitSimDivPickers.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitFilterCatalog.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitSmilesParse.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitReducedGraphs.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitRDBoost.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitInfoTheory.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitGraphMol.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMMPA.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitOptimizer.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitPartialCharges.so.1.2019.09.1 found in none of the libraries
   dh_installdeb -a -O--buildsystem=cmake -O--parallel
dh_installdeb: warning: Compatibility levels before 10 are deprecated (level 9 in use)
   dh_gencontrol -a -O--buildsystem=cmake -O--parallel
dpkg-gencontrol: warning: Depends field of package librdkit-dev: substitution variable ${shlibs:Depends} used, but is not defined
dpkg-gencontrol: warning: package postgresql-12-rdkit: substitution variable ${python3:Depends} unused, but is defined
dpkg-gencontrol: warning: package librdkit1: substitution variable ${python3:Depends} unused, but is defined
dpkg-gencontrol: warning: package librdkit-dev: substitution variable ${python3:Depends} unused, but is defined
dpkg-gencontrol: warning: package postgresql-12-rdkit: substitution variable ${python3:Depends} unused, but is defined
dpkg-gencontrol: warning: package librdkit1: substitution variable ${python3:Depends} unused, but is defined
   dh_md5sums -a -O--buildsystem=cmake -O--parallel
   dh_builddeb -a -O--buildsystem=cmake -O--parallel
dpkg-deb: building package 'librdkit-dev' in '../librdkit-dev_201909.1-4+b1_armhf.deb'.
dpkg-deb: building package 'librdkit1' in '../librdkit1_201909.1-4+b1_armhf.deb'.
dpkg-deb: building package 'postgresql-12-rdkit-dbgsym' in '../postgresql-12-rdkit-dbgsym_201909.1-4+b1_armhf.deb'.
dpkg-deb: building package 'python3-rdkit' in '../python3-rdkit_201909.1-4+b1_armhf.deb'.
dpkg-deb: building package 'postgresql-12-rdkit' in '../postgresql-12-rdkit_201909.1-4+b1_armhf.deb'.
dpkg-deb: building package 'librdkit1-dbgsym' in '../librdkit1-dbgsym_201909.1-4+b1_armhf.deb'.
dpkg-deb: building package 'python3-rdkit-dbgsym' in '../python3-rdkit-dbgsym_201909.1-4+b1_armhf.deb'.
 dpkg-genbuildinfo --build=any
 dpkg-genchanges --build=any -mRaspbian mythic lxc autobuilder 1 <root@raspbian.org> >../rdkit_201909.1-4+b1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2020-05-23T15:08:51Z

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Post Build Chroot                                                            |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


rdkit_201909.1-4+b1_armhf.changes:
----------------------------------

Format: 1.8
Date: Tue, 12 May 2020 06:21:19 -0400
Source: rdkit (201909.1-4)
Binary: librdkit-dev librdkit1 librdkit1-dbgsym postgresql-12-rdkit postgresql-12-rdkit-dbgsym python3-rdkit python3-rdkit-dbgsym
Binary-Only: yes
Architecture: armhf
Version: 201909.1-4+b1
Distribution: bullseye-staging
Urgency: low
Maintainer: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Changed-By: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Description:
 librdkit-dev - Collection of cheminformatics and machine-learning software (deve
 librdkit1  - Collection of cheminformatics and machine-learning software (shar
 postgresql-12-rdkit - Cheminformatics and machine-learning software (PostgreSQL Cartrid
 python3-rdkit - Collection of cheminformatics and machine-learning software
Changes:
 rdkit (201909.1-4+b1) bullseye-staging; urgency=low, binary-only=yes
 .
   * Binary-only non-maintainer upload for armhf; no source changes.
   * rebuild due to debcheck failure
Checksums-Sha1:
 f9e8264ea85856aeec604a52e11a4f9fef9ccbf6 319356 librdkit-dev_201909.1-4+b1_armhf.deb
 b2e2f6d39eee51f402ae8d5e18bec572ba151a44 79905644 librdkit1-dbgsym_201909.1-4+b1_armhf.deb
 ccef14387e21bd2cd45ae9f65aa1764a36f54aec 2586732 librdkit1_201909.1-4+b1_armhf.deb
 5f071fb439bb9a79045e45d36425e3ee1c5000b4 1133508 postgresql-12-rdkit-dbgsym_201909.1-4+b1_armhf.deb
 67b3b41e6e4973bbfe81f26bc881a6056e483c5d 438652 postgresql-12-rdkit_201909.1-4+b1_armhf.deb
 41d2b5f233c0459e36228060fff144c1a1ef9852 56580188 python3-rdkit-dbgsym_201909.1-4+b1_armhf.deb
 ce6f365d3c8b55899bb7bc94a919ea39411b34e8 2727920 python3-rdkit_201909.1-4+b1_armhf.deb
 5b41f3877871b5369c03d3710e66ee133a7a8527 15288 rdkit_201909.1-4+b1_armhf.buildinfo
Checksums-Sha256:
 1a9d74a43e952e76a77fad0355695c017dfa3400adb8c0669ed2a0968a8e7488 319356 librdkit-dev_201909.1-4+b1_armhf.deb
 6ff62a69d60457f9c00f57a70edfc4a84f8976075bf0e999e904d2c812abcb48 79905644 librdkit1-dbgsym_201909.1-4+b1_armhf.deb
 3b7f9a44e56884532479ac5ac130af3ed10bad8656cfb465ca2bd15a718287cc 2586732 librdkit1_201909.1-4+b1_armhf.deb
 f5100c75c6414a2814af20bc715ae207ee9df3291d69c30cd19456b9c1dd90ca 1133508 postgresql-12-rdkit-dbgsym_201909.1-4+b1_armhf.deb
 db575b47895acdfcf028a6992dc9f61e00eb0b531c8abcca8673ad1469ceed15 438652 postgresql-12-rdkit_201909.1-4+b1_armhf.deb
 e18850bbe598403864f48514626dd8881719f375bd23c247f2846d0bc86dbe41 56580188 python3-rdkit-dbgsym_201909.1-4+b1_armhf.deb
 5d5fee0b83b09add970ea4b81aaecb680b5661c4da1d016218c4753167889659 2727920 python3-rdkit_201909.1-4+b1_armhf.deb
 1234f44184865b6c0b376acb15cdcc8ea2c5c11e03082ba95b36bb2d676bff47 15288 rdkit_201909.1-4+b1_armhf.buildinfo
Files:
 d9b3bc38b241b9d7bd8d907fb2458bfa 319356 libdevel optional librdkit-dev_201909.1-4+b1_armhf.deb
 b79bc01459bd5a05150ec182d2f886fe 79905644 debug optional librdkit1-dbgsym_201909.1-4+b1_armhf.deb
 167623a62e1621859904e7769e74c094 2586732 libs optional librdkit1_201909.1-4+b1_armhf.deb
 f0fc1d9fba4570ff3e10327aafd0b3fe 1133508 debug optional postgresql-12-rdkit-dbgsym_201909.1-4+b1_armhf.deb
 1281f0670d63eecdfa83018ae23bfcde 438652 database optional postgresql-12-rdkit_201909.1-4+b1_armhf.deb
 fc2d75af9c1c269dad261d97b7d0a81a 56580188 debug optional python3-rdkit-dbgsym_201909.1-4+b1_armhf.deb
 4780af889e3c84987a2d8967c31b8faa 2727920 python optional python3-rdkit_201909.1-4+b1_armhf.deb
 04da07be6e71827d45ae55bae9abb55c 15288 science optional rdkit_201909.1-4+b1_armhf.buildinfo

+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


librdkit-dev_201909.1-4+b1_armhf.deb
------------------------------------

 new Debian package, version 2.0.
 size 319356 bytes: control archive=9048 bytes.
    1521 bytes,    37 lines      control              
   25421 bytes,   304 lines      md5sums              
 Package: librdkit-dev
 Source: rdkit (201909.1-4)
 Version: 201909.1-4+b1
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 1895
 Depends: librdkit1 (= 201909.1-4+b1)
 Section: libdevel
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Collection of cheminformatics and machine-learning software (development files)
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.  Features Include:
  .
   * Chemical reaction handling and transforms
   * Substructure searching with SMARTS
   * Canonical SMILES
   * Molecule-molecule alignment
   * Large number of molecular descriptors, including topological,
     compositional, EState, SlogP/SMR, VSA and Feature-map vectors
   * Fragmentation using RECAP rules
   * 2D coordinate generation and depiction, including constrained depiction
   * 3D coordinate generation using geometry embedding
   * UFF and MMFF94 forcefields
   * Chirality support, including calculation of (R/S) stereochemistry codes
   * 2D pharmacophore searching
   * Fingerprinting, including Daylight-like, atom pairs, topological
     torsions, Morgan algorithm and MACCS keys
   * Calculation of shape similarity
   * Multi-molecule maximum common substructure
   * Machine-learning via clustering and information theory algorithms
   * Gasteiger-Marsili partial charge calculation
  .
  File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit
  binary format.
  .
  This package contains the header files.

drwxr-xr-x root/root         0 2020-05-12 10:21 ./
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/Catalogs/
-rw-r--r-- root/root     15984 2019-10-25 03:22 ./usr/include/rdkit/Catalogs/Catalog.h
-rw-r--r-- root/root      1386 2019-10-25 03:22 ./usr/include/rdkit/Catalogs/CatalogEntry.h
-rw-r--r-- root/root      1245 2019-10-25 03:22 ./usr/include/rdkit/Catalogs/CatalogParams.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/ChemicalFeatures/
-rw-r--r-- root/root      1052 2019-10-25 03:22 ./usr/include/rdkit/ChemicalFeatures/ChemicalFeature.h
-rw-r--r-- root/root      2849 2019-10-25 03:22 ./usr/include/rdkit/ChemicalFeatures/FreeChemicalFeature.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/DataManip/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/DataManip/MetricMatrixCalc/
-rw-r--r-- root/root      1867 2019-10-25 03:22 ./usr/include/rdkit/DataManip/MetricMatrixCalc/MetricFuncs.h
-rw-r--r-- root/root      3532 2019-10-25 03:22 ./usr/include/rdkit/DataManip/MetricMatrixCalc/MetricMatrixCalc.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/DataStructs/
-rw-r--r-- root/root     11703 2019-10-25 03:22 ./usr/include/rdkit/DataStructs/BitOps.h
-rw-r--r-- root/root      2509 2019-10-25 03:22 ./usr/include/rdkit/DataStructs/BitVect.h
-rw-r--r-- root/root      1120 2019-10-25 03:22 ./usr/include/rdkit/DataStructs/BitVectUtils.h
-rw-r--r-- root/root       584 2019-10-25 03:22 ./usr/include/rdkit/DataStructs/BitVects.h
-rw-r--r-- root/root       841 2019-10-25 03:22 ./usr/include/rdkit/DataStructs/DatastructsException.h
-rw-r--r-- root/root      2742 2019-10-25 03:22 ./usr/include/rdkit/DataStructs/DatastructsStreamOps.h
-rw-r--r-- root/root       864 2019-10-25 03:22 ./usr/include/rdkit/DataStructs/DiscreteDistMat.h
-rw-r--r-- root/root      4334 2019-10-25 03:22 ./usr/include/rdkit/DataStructs/DiscreteValueVect.h
-rw-r--r-- root/root      3250 2019-10-25 03:22 ./usr/include/rdkit/DataStructs/ExplicitBitVect.h
-rw-r--r-- root/root      9593 2019-10-25 03:22 ./usr/include/rdkit/DataStructs/FPBReader.h
-rw-r--r-- root/root      7651 2019-10-25 03:22 ./usr/include/rdkit/DataStructs/MultiFPBReader.h
-rw-r--r-- root/root      3024 2019-10-25 03:22 ./usr/include/rdkit/DataStructs/SparseBitVect.h
-rw-r--r-- root/root     16369 2019-10-25 03:22 ./usr/include/rdkit/DataStructs/SparseIntVect.h
-rw-r--r-- root/root      1296 2019-10-25 03:22 ./usr/include/rdkit/DataStructs/base64.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/DistGeom/
-rw-r--r-- root/root      3456 2019-10-25 03:22 ./usr/include/rdkit/DistGeom/BoundsMatrix.h
-rw-r--r-- root/root      1653 2019-10-25 03:22 ./usr/include/rdkit/DistGeom/ChiralSet.h
-rw-r--r-- root/root      3577 2019-10-25 03:22 ./usr/include/rdkit/DistGeom/ChiralViolationContrib.h
-rw-r--r-- root/root      6528 2019-10-25 03:22 ./usr/include/rdkit/DistGeom/DistGeomUtils.h
-rw-r--r-- root/root      1852 2019-10-25 03:22 ./usr/include/rdkit/DistGeom/DistViolationContrib.h
-rw-r--r-- root/root      2007 2019-10-25 03:22 ./usr/include/rdkit/DistGeom/FourthDimContrib.h
-rw-r--r-- root/root      1310 2019-10-25 03:22 ./usr/include/rdkit/DistGeom/TriangleSmooth.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/Features/
-rw-r--r-- root/root      2913 2019-10-25 03:22 ./usr/include/rdkit/Features/Feature.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/ForceField/
-rw-r--r-- root/root      1126 2019-10-25 03:22 ./usr/include/rdkit/ForceField/Contrib.h
-rw-r--r-- root/root      8756 2019-10-25 03:22 ./usr/include/rdkit/ForceField/ForceField.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/ForceField/MMFF/
-rw-r--r-- root/root      2988 2019-10-25 03:22 ./usr/include/rdkit/ForceField/MMFF/AngleBend.h
-rw-r--r-- root/root      2168 2019-10-25 03:22 ./usr/include/rdkit/ForceField/MMFF/AngleConstraint.h
-rw-r--r-- root/root      2278 2019-10-25 03:22 ./usr/include/rdkit/ForceField/MMFF/BondStretch.h
-rw-r--r-- root/root       663 2019-10-25 03:22 ./usr/include/rdkit/ForceField/MMFF/Contribs.h
-rw-r--r-- root/root      2074 2019-10-25 03:22 ./usr/include/rdkit/ForceField/MMFF/DistanceConstraint.h
-rw-r--r-- root/root      4024 2019-10-25 03:22 ./usr/include/rdkit/ForceField/MMFF/Nonbonded.h
-rw-r--r-- root/root      2390 2019-10-25 03:22 ./usr/include/rdkit/ForceField/MMFF/OopBend.h
-rw-r--r-- root/root     40700 2019-10-25 03:22 ./usr/include/rdkit/ForceField/MMFF/Params.h
-rw-r--r-- root/root      1698 2019-10-25 03:22 ./usr/include/rdkit/ForceField/MMFF/PositionConstraint.h
-rw-r--r-- root/root      2386 2019-10-25 03:22 ./usr/include/rdkit/ForceField/MMFF/StretchBend.h
-rw-r--r-- root/root      3125 2019-10-25 03:22 ./usr/include/rdkit/ForceField/MMFF/TorsionAngle.h
-rw-r--r-- root/root      2696 2019-10-25 03:22 ./usr/include/rdkit/ForceField/MMFF/TorsionConstraint.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/ForceField/UFF/
-rw-r--r-- root/root      3538 2019-10-25 03:22 ./usr/include/rdkit/ForceField/UFF/AngleBend.h
-rw-r--r-- root/root      2139 2019-10-25 03:22 ./usr/include/rdkit/ForceField/UFF/AngleConstraint.h
-rw-r--r-- root/root      2538 2019-10-25 03:22 ./usr/include/rdkit/ForceField/UFF/BondStretch.h
-rw-r--r-- root/root       599 2019-10-25 03:22 ./usr/include/rdkit/ForceField/UFF/Contribs.h
-rw-r--r-- root/root      2070 2019-10-25 03:22 ./usr/include/rdkit/ForceField/UFF/DistanceConstraint.h
-rw-r--r-- root/root      2719 2019-10-25 03:22 ./usr/include/rdkit/ForceField/UFF/Inversion.h
-rw-r--r-- root/root      2872 2019-10-25 03:22 ./usr/include/rdkit/ForceField/UFF/Nonbonded.h
-rw-r--r-- root/root      4570 2019-10-25 03:22 ./usr/include/rdkit/ForceField/UFF/Params.h
-rw-r--r-- root/root      1694 2019-10-25 03:22 ./usr/include/rdkit/ForceField/UFF/PositionConstraint.h
-rw-r--r-- root/root      4598 2019-10-25 03:22 ./usr/include/rdkit/ForceField/UFF/TorsionAngle.h
-rw-r--r-- root/root      2668 2019-10-25 03:22 ./usr/include/rdkit/ForceField/UFF/TorsionConstraint.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/Geometry/
-rw-r--r-- root/root      1559 2019-10-25 03:22 ./usr/include/rdkit/Geometry/Grid3D.h
-rw-r--r-- root/root      2027 2019-10-25 03:22 ./usr/include/rdkit/Geometry/GridUtils.h
-rw-r--r-- root/root       449 2019-10-25 03:22 ./usr/include/rdkit/Geometry/Transform.h
-rw-r--r-- root/root      2584 2019-10-25 03:22 ./usr/include/rdkit/Geometry/Transform2D.h
-rw-r--r-- root/root      2749 2019-10-25 03:22 ./usr/include/rdkit/Geometry/Transform3D.h
-rw-r--r-- root/root      8404 2019-10-25 03:22 ./usr/include/rdkit/Geometry/UniformGrid3D.h
-rw-r--r-- root/root      3339 2019-10-25 03:22 ./usr/include/rdkit/Geometry/Utils.h
-rw-r--r-- root/root     14880 2019-10-25 03:22 ./usr/include/rdkit/Geometry/point.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/GraphMol/
-rw-r--r-- root/root     14519 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Atom.h
-rw-r--r-- root/root      5708 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/AtomIterators.h
-rw-r--r-- root/root     10602 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Bond.h
-rw-r--r-- root/root      2362 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/BondIterators.h
-rw-r--r-- root/root      4149 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Canon.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/GraphMol/ChemReactions/
-rw-r--r-- root/root      4742 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/ChemReactions/CartesianProduct.h
-rw-r--r-- root/root      6478 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/ChemReactions/Enumerate.h
-rw-r--r-- root/root      6997 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/ChemReactions/EnumerateBase.h
-rw-r--r-- root/root      2728 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/ChemReactions/EnumerationPickler.h
-rw-r--r-- root/root      8149 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/ChemReactions/EnumerationStrategyBase.h
-rw-r--r-- root/root      2874 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/ChemReactions/PreprocessRxn.h
-rw-r--r-- root/root      5466 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/ChemReactions/RandomSample.h
-rw-r--r-- root/root      6190 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/ChemReactions/RandomSampleAllBBs.h
-rw-r--r-- root/root     18328 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/ChemReactions/Reaction.h
-rw-r--r-- root/root      5967 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/ChemReactions/ReactionFingerprints.h
-rw-r--r-- root/root      5127 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/ChemReactions/ReactionParser.h
-rw-r--r-- root/root      4288 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/ChemReactions/ReactionPickler.h
-rw-r--r-- root/root      4685 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/ChemReactions/ReactionRunner.h
-rw-r--r-- root/root      3151 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/ChemReactions/ReactionUtils.h
-rw-r--r-- root/root      6535 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/ChemReactions/SanitizeRxn.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/GraphMol/ChemTransforms/
-rw-r--r-- root/root     11649 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/ChemTransforms/ChemTransforms.h
-rw-r--r-- root/root      4215 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/ChemTransforms/MolFragmenter.h
-rw-r--r-- root/root      1815 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Chirality.h
-rw-r--r-- root/root      4814 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Conformer.h
-rw-r--r-- root/root      5899 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/CoordGen.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/GraphMol/Depictor/
-rw-r--r-- root/root     12274 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Depictor/DepictUtils.h
-rw-r--r-- root/root     19133 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Depictor/EmbeddedFrag.h
-rw-r--r-- root/root      7370 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Depictor/RDDepictor.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/GraphMol/Descriptors/
-rw-r--r-- root/root      2073 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Descriptors/AUTOCORR2D.h
-rw-r--r-- root/root      7363 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Descriptors/ConnectivityDescriptors.h
-rw-r--r-- root/root      4669 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Descriptors/Crippen.h
-rw-r--r-- root/root      2116 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Descriptors/Data3Ddescriptors.h
-rw-r--r-- root/root      6907 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Descriptors/Lipinski.h
-rw-r--r-- root/root      1141 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Descriptors/MQN.h
-rw-r--r-- root/root      2852 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Descriptors/MolData3Ddescriptors.h
-rw-r--r-- root/root      2253 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Descriptors/MolDescriptors.h
-rw-r--r-- root/root      4769 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Descriptors/MolSurf.h
-rw-r--r-- root/root      4721 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Descriptors/Property.h
-rw-r--r-- root/root      3938 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Descriptors/RegisterDescriptor.h
-rw-r--r-- root/root      4874 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Descriptors/USRDescriptor.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/GraphMol/DistGeomHelpers/
-rw-r--r-- root/root      2953 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.h
-rw-r--r-- root/root     20363 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/DistGeomHelpers/Embedder.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/GraphMol/FMCS/
-rw-r--r-- root/root      6676 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/FMCS/FMCS.h
-rw-r--r-- root/root      1224 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/FMCS/Graph.h
-rw-r--r-- root/root      1468 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/FMCS/MatchTable.h
-rw-r--r-- root/root      3621 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/FMCS/MaximumCommonSubgraph.h
-rw-r--r-- root/root      8507 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/FMCS/RingMatchTableSet.h
-rw-r--r-- root/root      5304 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/FMCS/Seed.h
-rw-r--r-- root/root      1691 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/FMCS/SeedSet.h
-rw-r--r-- root/root      1487 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/FMCS/SubstructMatchCustom.h
-rw-r--r-- root/root      5783 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/FMCS/SubstructureCache.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/GraphMol/FileParsers/
-rw-r--r-- root/root      8667 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/FileParsers/FileParserUtils.h
-rw-r--r-- root/root     15255 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/FileParsers/FileParsers.h
-rw-r--r-- root/root      1537 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/FileParsers/MolFileStereochem.h
-rw-r--r-- root/root     15444 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/FileParsers/MolSupplier.h
-rw-r--r-- root/root     10801 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/FileParsers/MolWriters.h
-rw-r--r-- root/root      4093 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/FileParsers/SequenceParsers.h
-rw-r--r-- root/root      1360 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/FileParsers/SequenceWriters.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/GraphMol/FilterCatalog/
-rw-r--r-- root/root      9107 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/FilterCatalog/FilterCatalog.h
-rw-r--r-- root/root      8977 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/FilterCatalog/FilterCatalogEntry.h
-rw-r--r-- root/root      5392 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/FilterCatalog/FilterMatcherBase.h
-rw-r--r-- root/root     19852 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/FilterCatalog/FilterMatchers.h
-rw-r--r-- root/root      2477 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/FilterCatalog/FunctionalGroupHierarchy.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/GraphMol/Fingerprints/
-rw-r--r-- root/root      6725 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Fingerprints/AtomPairGenerator.h
-rw-r--r-- root/root     12213 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Fingerprints/AtomPairs.h
-rw-r--r-- root/root     12701 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Fingerprints/FingerprintGenerator.h
-rw-r--r-- root/root      5542 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Fingerprints/FingerprintUtil.h
-rw-r--r-- root/root      6535 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Fingerprints/Fingerprints.h
-rw-r--r-- root/root       774 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Fingerprints/MACCS.h
-rw-r--r-- root/root      9081 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Fingerprints/MorganFingerprints.h
-rw-r--r-- root/root      8327 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Fingerprints/MorganGenerator.h
-rw-r--r-- root/root      5563 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Fingerprints/RDKitFPGenerator.h
-rw-r--r-- root/root      4579 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Fingerprints/TopologicalTorsionGenerator.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/GraphMol/ForceFieldHelpers/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/GraphMol/ForceFieldHelpers/CrystalFF/
-rw-r--r-- root/root      2328 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/ForceFieldHelpers/CrystalFF/TorsionAngleM6.h
-rw-r--r-- root/root      1166 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.h
-rw-r--r-- root/root      4531 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/ForceFieldHelpers/FFConvenience.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/GraphMol/ForceFieldHelpers/MMFF/
-rw-r--r-- root/root     10314 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/ForceFieldHelpers/MMFF/AtomTyper.h
-rw-r--r-- root/root      5405 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/ForceFieldHelpers/MMFF/Builder.h
-rw-r--r-- root/root      4136 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/ForceFieldHelpers/MMFF/MMFF.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/GraphMol/ForceFieldHelpers/UFF/
-rw-r--r-- root/root      2111 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/ForceFieldHelpers/UFF/AtomTyper.h
-rw-r--r-- root/root      5038 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/ForceFieldHelpers/UFF/Builder.h
-rw-r--r-- root/root      3307 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/ForceFieldHelpers/UFF/UFF.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/GraphMol/FragCatalog/
-rw-r--r-- root/root       817 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/FragCatalog/FragCatGenerator.h
-rw-r--r-- root/root      3049 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/FragCatalog/FragCatParams.h
-rw-r--r-- root/root      3533 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/FragCatalog/FragCatalogEntry.h
-rw-r--r-- root/root      2605 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/FragCatalog/FragCatalogUtils.h
-rw-r--r-- root/root      1018 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/FragCatalog/FragFPGenerator.h
-rw-r--r-- root/root       479 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/GraphMol.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/GraphMol/MMPA/
-rw-r--r-- root/root      3290 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MMPA/MMPA.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/GraphMol/MolAlign/
-rw-r--r-- root/root      6714 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolAlign/AlignMolecules.h
-rw-r--r-- root/root     13536 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolAlign/O3AAlignMolecules.h
-rw-r--r-- root/root      2654 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolBundle.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/GraphMol/MolCatalog/
-rw-r--r-- root/root       449 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolCatalog/MolCatalog.h
-rw-r--r-- root/root      2860 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolCatalog/MolCatalogEntry.h
-rw-r--r-- root/root      1075 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolCatalog/MolCatalogParams.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/GraphMol/MolChemicalFeatures/
-rw-r--r-- root/root      2047 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolChemicalFeatures/FeatureParser.h
-rw-r--r-- root/root      3245 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolChemicalFeatures/MolChemicalFeature.h
-rw-r--r-- root/root      2151 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h
-rw-r--r-- root/root      2788 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolChemicalFeatures/MolChemicalFeatureFactory.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/GraphMol/MolDraw2D/
-rw-r--r-- root/root     24322 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2D.h
-rw-r--r-- root/root      2477 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2DDetails.h
-rw-r--r-- root/root      3969 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2DSVG.h
-rw-r--r-- root/root      7398 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2DUtils.h
-rw-r--r-- root/root      3348 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2Dwx.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/GraphMol/MolHash/
-rw-r--r-- root/root      3162 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolHash/MolHash.h
-rw-r--r-- root/root      1637 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolHash/nmmolhash.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/GraphMol/MolInterchange/
-rw-r--r-- root/root      2655 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolInterchange/MolInterchange.h
-rw-r--r-- root/root      1923 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolInterchange/details.h
-rw-r--r-- root/root     38414 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolOps.h
-rw-r--r-- root/root      9175 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolPickler.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/GraphMol/MolStandardize/
-rw-r--r-- root/root      1549 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolStandardize/AcidBaseCatalogEntry.h
-rw-r--r-- root/root      1651 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolStandardize/AcidBaseCatalogParams.h
-rw-r--r-- root/root       948 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolStandardize/AcidBaseCatalogUtils.h
-rw-r--r-- root/root      3657 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolStandardize/Charge.h
-rw-r--r-- root/root      2573 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolStandardize/Fragment.h
-rw-r--r-- root/root      1592 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolStandardize/FragmentCatalogEntry.h
-rw-r--r-- root/root      1630 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolStandardize/FragmentCatalogParams.h
-rw-r--r-- root/root       901 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolStandardize/FragmentCatalogUtils.h
-rw-r--r-- root/root      1687 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolStandardize/Metal.h
-rw-r--r-- root/root      5056 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolStandardize/MolStandardize.h
-rw-r--r-- root/root      3275 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolStandardize/Normalize.h
-rw-r--r-- root/root      2231 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolStandardize/Tautomer.h
-rw-r--r-- root/root      1542 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolStandardize/TautomerCatalogEntry.h
-rw-r--r-- root/root      1659 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolStandardize/TautomerCatalogParams.h
-rw-r--r-- root/root      2063 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolStandardize/TautomerCatalogUtils.h
-rw-r--r-- root/root      1539 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolStandardize/TransformCatalogEntry.h
-rw-r--r-- root/root      1762 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolStandardize/TransformCatalogParams.h
-rw-r--r-- root/root       972 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolStandardize/TransformCatalogUtils.h
-rw-r--r-- root/root      6735 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolStandardize/Validate.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/GraphMol/MolTransforms/
-rw-r--r-- root/root      9199 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MolTransforms/MolTransforms.h
-rw-r--r-- root/root      5568 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/MonomerInfo.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/GraphMol/PartialCharges/
-rw-r--r-- root/root       883 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/PartialCharges/GasteigerCharges.h
-rw-r--r-- root/root      2609 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/PartialCharges/GasteigerParams.h
-rw-r--r-- root/root     11301 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/PeriodicTable.h
-rw-r--r-- root/root      3743 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/QueryAtom.h
-rw-r--r-- root/root      3795 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/QueryBond.h
-rw-r--r-- root/root     35581 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/QueryOps.h
-rw-r--r-- root/root       852 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/RDKitBase.h
-rw-r--r-- root/root       581 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/RDKitQueries.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/GraphMol/RGroupDecomposition/
-rw-r--r-- root/root      4740 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/RGroupDecomposition/RGroupDecomp.h
-rw-r--r-- root/root     23474 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/ROMol.h
-rw-r--r-- root/root      6816 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/RWMol.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/GraphMol/ReducedGraphs/
-rw-r--r-- root/root      2689 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/ReducedGraphs/ReducedGraphs.h
-rw-r--r-- root/root      6620 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Resonance.h
-rw-r--r-- root/root      5993 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/RingInfo.h
-rw-r--r-- root/root      3459 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Rings.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/GraphMol/SLNParse/
-rw-r--r-- root/root      3435 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/SLNParse/SLNAttribs.h
-rw-r--r-- root/root      2741 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/SLNParse/SLNParse.h
-rw-r--r-- root/root     11522 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/SLNParse/SLNParseOps.h
-rw-r--r-- root/root      4155 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/SanitException.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/GraphMol/ShapeHelpers/
-rw-r--r-- root/root      2914 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/ShapeHelpers/ShapeEncoder.h
-rw-r--r-- root/root     11849 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/ShapeHelpers/ShapeUtils.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/GraphMol/SmilesParse/
-rw-r--r-- root/root      1378 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/SmilesParse/SmartsWrite.h
-rw-r--r-- root/root      4517 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/SmilesParse/SmilesParse.h
-rw-r--r-- root/root      1673 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/SmilesParse/SmilesParseOps.h
-rw-r--r-- root/root      7055 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/SmilesParse/SmilesWrite.h
-rw-r--r-- root/root       505 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/SmilesParse/primes.h
-rw-r--r-- root/root      2068 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/StereoGroup.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/GraphMol/StructChecker/
-rw-r--r-- root/root      2015 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/StructChecker/Pattern.h
-rw-r--r-- root/root      1695 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/StructChecker/ReCharge.h
-rw-r--r-- root/root      3035 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/StructChecker/Stereo.h
-rw-r--r-- root/root       739 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/StructChecker/StripSmallFragments.h
-rw-r--r-- root/root      9250 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/StructChecker/StructChecker.h
-rw-r--r-- root/root       735 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/StructChecker/Tautomer.h
-rw-r--r-- root/root      1112 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/StructChecker/Utilites.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/GraphMol/Subgraphs/
-rw-r--r-- root/root      2251 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Subgraphs/SubgraphUtils.h
-rw-r--r-- root/root      5987 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Subgraphs/Subgraphs.h
-rw-r--r-- root/root      6613 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/SubstanceGroup.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/GraphMol/Substruct/
-rw-r--r-- root/root      8224 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Substruct/SubstructMatch.h
-rw-r--r-- root/root      1172 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Substruct/SubstructUtils.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/GraphMol/SubstructLibrary/
-rw-r--r-- root/root     21682 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/SubstructLibrary/SubstructLibrary.h
-rw-r--r-- root/root      6668 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/SubstructLibrary/SubstructLibrarySerialization.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/GraphMol/Trajectory/
-rw-r--r-- root/root      2227 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Trajectory/Snapshot.h
-rw-r--r-- root/root      4445 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/Trajectory/Trajectory.h
-rw-r--r-- root/root      2191 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/atomic_data.h
-rw-r--r-- root/root       373 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/details.h
-rw-r--r-- root/root     23358 2019-10-25 03:22 ./usr/include/rdkit/GraphMol/new_canon.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/Numerics/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/Numerics/Alignment/
-rw-r--r-- root/root      1598 2019-10-25 03:22 ./usr/include/rdkit/Numerics/Alignment/AlignPoints.h
-rw-r--r-- root/root      6988 2019-10-25 03:22 ./usr/include/rdkit/Numerics/Conrec.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/Numerics/EigenSolvers/
-rw-r--r-- root/root      2282 2019-10-25 03:22 ./usr/include/rdkit/Numerics/EigenSolvers/PowerEigenSolver.h
-rw-r--r-- root/root     10369 2019-10-25 03:22 ./usr/include/rdkit/Numerics/Matrix.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/Numerics/Optimizer/
-rw-r--r-- root/root     13215 2019-10-25 03:22 ./usr/include/rdkit/Numerics/Optimizer/BFGSOpt.h
-rw-r--r-- root/root      2444 2019-10-25 03:22 ./usr/include/rdkit/Numerics/SquareMatrix.h
-rw-r--r-- root/root     10177 2019-10-25 03:22 ./usr/include/rdkit/Numerics/SymmMatrix.h
-rw-r--r-- root/root      8407 2019-10-25 03:22 ./usr/include/rdkit/Numerics/Vector.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/Query/
-rw-r--r-- root/root      1716 2019-10-25 03:22 ./usr/include/rdkit/Query/AndQuery.h
-rw-r--r-- root/root      2728 2019-10-25 03:22 ./usr/include/rdkit/Query/EqualityQuery.h
-rw-r--r-- root/root      2351 2019-10-25 03:22 ./usr/include/rdkit/Query/GreaterEqualQuery.h
-rw-r--r-- root/root      2272 2019-10-25 03:22 ./usr/include/rdkit/Query/GreaterQuery.h
-rw-r--r-- root/root      2325 2019-10-25 03:22 ./usr/include/rdkit/Query/LessEqualQuery.h
-rw-r--r-- root/root      2248 2019-10-25 03:22 ./usr/include/rdkit/Query/LessQuery.h
-rw-r--r-- root/root      2561 2019-10-25 03:22 ./usr/include/rdkit/Query/NullQueryAlgebra.h
-rw-r--r-- root/root      1707 2019-10-25 03:22 ./usr/include/rdkit/Query/OrQuery.h
-rw-r--r-- root/root      6446 2019-10-25 03:22 ./usr/include/rdkit/Query/Query.h
-rw-r--r-- root/root       839 2019-10-25 03:22 ./usr/include/rdkit/Query/QueryObjects.h
-rw-r--r-- root/root      3682 2019-10-25 03:22 ./usr/include/rdkit/Query/RangeQuery.h
-rw-r--r-- root/root      2589 2019-10-25 03:22 ./usr/include/rdkit/Query/SetQuery.h
-rw-r--r-- root/root      1795 2019-10-25 03:22 ./usr/include/rdkit/Query/XOrQuery.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/RDBoost/
-rw-r--r-- root/root      2239 2019-10-25 03:22 ./usr/include/rdkit/RDBoost/PySequenceHolder.h
-rw-r--r-- root/root      6476 2019-10-25 03:22 ./usr/include/rdkit/RDBoost/Wrap.h
-rw-r--r-- root/root       342 2019-10-25 03:22 ./usr/include/rdkit/RDBoost/boost_numpy.h
-rw-r--r-- root/root      7525 2019-10-25 03:22 ./usr/include/rdkit/RDBoost/list_indexing_suite.hpp
-rw-r--r-- root/root       329 2019-10-25 03:22 ./usr/include/rdkit/RDBoost/python.h
-rw-r--r-- root/root     17773 2019-10-25 03:22 ./usr/include/rdkit/RDBoost/python_streambuf.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/RDGeneral/
-rw-r--r-- root/root      1066 2019-10-25 03:22 ./usr/include/rdkit/RDGeneral/BadFileException.h
-rw-r--r-- root/root      2898 2019-10-25 03:22 ./usr/include/rdkit/RDGeneral/BoostEndInclude.h
-rw-r--r-- root/root      3804 2019-10-25 03:22 ./usr/include/rdkit/RDGeneral/BoostStartInclude.h
-rw-r--r-- root/root      9407 2019-10-25 03:22 ./usr/include/rdkit/RDGeneral/Dict.h
-rw-r--r-- root/root      1700 2019-10-25 03:22 ./usr/include/rdkit/RDGeneral/Exceptions.h
-rw-r--r-- root/root      1046 2019-10-25 03:22 ./usr/include/rdkit/RDGeneral/FileParseException.h
-rw-r--r-- root/root      7147 2019-10-25 03:22 ./usr/include/rdkit/RDGeneral/Invariant.h
-rw-r--r-- root/root      2199 2019-10-25 03:22 ./usr/include/rdkit/RDGeneral/LocaleSwitcher.h
-rw-r--r-- root/root      6135 2019-10-25 03:22 ./usr/include/rdkit/RDGeneral/RDAny.h
-rw-r--r-- root/root       945 2020-05-12 10:21 ./usr/include/rdkit/RDGeneral/RDConfig.h
-rw-r--r-- root/root      3255 2019-10-25 03:22 ./usr/include/rdkit/RDGeneral/RDLog.h
-rw-r--r-- root/root      5001 2019-10-25 03:22 ./usr/include/rdkit/RDGeneral/RDProps.h
-rw-r--r-- root/root       911 2019-10-25 03:22 ./usr/include/rdkit/RDGeneral/RDThreads.h
-rw-r--r-- root/root     15898 2019-10-25 03:22 ./usr/include/rdkit/RDGeneral/RDValue-doublemagic.h
-rw-r--r-- root/root     12674 2019-10-25 03:22 ./usr/include/rdkit/RDGeneral/RDValue-taggedunion.h
-rw-r--r-- root/root      8405 2019-10-25 03:22 ./usr/include/rdkit/RDGeneral/RDValue.h
-rw-r--r-- root/root      2467 2019-10-25 03:22 ./usr/include/rdkit/RDGeneral/Ranking.h
-rw-r--r-- root/root     16709 2019-10-25 03:22 ./usr/include/rdkit/RDGeneral/StreamOps.h
-rw-r--r-- root/root     23521 2020-05-12 10:21 ./usr/include/rdkit/RDGeneral/export.h
-rw-r--r-- root/root      3713 2019-10-25 03:22 ./usr/include/rdkit/RDGeneral/hanoiSort.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/RDGeneral/hash/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/RDGeneral/hash/hash/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/RDGeneral/hash/hash/detail/
-rw-r--r-- root/root      4769 2019-10-25 03:22 ./usr/include/rdkit/RDGeneral/hash/hash/detail/float_functions.hpp
-rw-r--r-- root/root      5851 2019-10-25 03:22 ./usr/include/rdkit/RDGeneral/hash/hash/detail/hash_float.hpp
-rw-r--r-- root/root      4988 2019-10-25 03:22 ./usr/include/rdkit/RDGeneral/hash/hash/extensions.hpp
-rw-r--r-- root/root     14786 2019-10-25 03:22 ./usr/include/rdkit/RDGeneral/hash/hash/hash.hpp
-rw-r--r-- root/root      1250 2019-10-25 03:22 ./usr/include/rdkit/RDGeneral/hash/hash/hash_fwd.hpp
-rw-r--r-- root/root      4190 2020-05-12 10:21 ./usr/include/rdkit/RDGeneral/test.h
-rw-r--r-- root/root     14703 2019-10-25 03:22 ./usr/include/rdkit/RDGeneral/types.h
-rw-r--r-- root/root      3079 2019-10-25 03:22 ./usr/include/rdkit/RDGeneral/utils.h
-rw-r--r-- root/root       876 2020-05-12 10:21 ./usr/include/rdkit/RDGeneral/versions.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/RDStreams/
-rw-r--r-- root/root       430 2019-10-25 03:22 ./usr/include/rdkit/RDStreams/streams.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/include/rdkit/SimDivPickers/
-rw-r--r-- root/root      2747 2019-10-25 03:22 ./usr/include/rdkit/SimDivPickers/DistPicker.h
-rw-r--r-- root/root      3694 2019-10-25 03:22 ./usr/include/rdkit/SimDivPickers/HierarchicalClusterPicker.h
-rw-r--r-- root/root     13469 2019-10-25 03:22 ./usr/include/rdkit/SimDivPickers/LeaderPicker.h
-rw-r--r-- root/root     10128 2019-10-25 03:22 ./usr/include/rdkit/SimDivPickers/MaxMinPicker.h
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitAlignment.so -> libRDKitAlignment.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitCatalogs.so -> libRDKitCatalogs.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitChemReactions.so -> libRDKitChemReactions.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitChemTransforms.so -> libRDKitChemTransforms.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitChemicalFeatures.so -> libRDKitChemicalFeatures.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitDataStructs.so -> libRDKitDataStructs.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitDepictor.so -> libRDKitDepictor.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitDescriptors.so -> libRDKitDescriptors.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitDistGeomHelpers.so -> libRDKitDistGeomHelpers.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitDistGeometry.so -> libRDKitDistGeometry.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitEigenSolvers.so -> libRDKitEigenSolvers.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitFMCS.so -> libRDKitFMCS.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitFileParsers.so -> libRDKitFileParsers.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitFilterCatalog.so -> libRDKitFilterCatalog.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitFingerprints.so -> libRDKitFingerprints.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitForceField.so -> libRDKitForceField.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitForceFieldHelpers.so -> libRDKitForceFieldHelpers.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitFragCatalog.so -> libRDKitFragCatalog.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitGraphMol.so -> libRDKitGraphMol.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitInfoTheory.so -> libRDKitInfoTheory.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitMMPA.so -> libRDKitMMPA.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitMolAlign.so -> libRDKitMolAlign.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitMolCatalog.so -> libRDKitMolCatalog.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitMolChemicalFeatures.so -> libRDKitMolChemicalFeatures.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitMolDraw2D.so -> libRDKitMolDraw2D.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitMolHash.so -> libRDKitMolHash.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitMolInterchange.so -> libRDKitMolInterchange.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitMolStandardize.so -> libRDKitMolStandardize.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitMolTransforms.so -> libRDKitMolTransforms.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitOptimizer.so -> libRDKitOptimizer.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitPartialCharges.so -> libRDKitPartialCharges.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitRDBoost.so -> libRDKitRDBoost.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitRDGeneral.so -> libRDKitRDGeneral.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitRDGeometryLib.so -> libRDKitRDGeometryLib.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitRDStreams.so -> libRDKitRDStreams.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitRGroupDecomposition.so -> libRDKitRGroupDecomposition.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitReducedGraphs.so -> libRDKitReducedGraphs.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitSLNParse.so -> libRDKitSLNParse.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitShapeHelpers.so -> libRDKitShapeHelpers.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitSimDivPickers.so -> libRDKitSimDivPickers.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitSmilesParse.so -> libRDKitSmilesParse.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitStructChecker.so -> libRDKitStructChecker.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitSubgraphs.so -> libRDKitSubgraphs.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitSubstructLibrary.so -> libRDKitSubstructLibrary.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitSubstructMatch.so -> libRDKitSubstructMatch.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitTrajectory.so -> libRDKitTrajectory.so.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKithc.so -> libRDKithc.so.1
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/share/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/share/doc/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/share/doc/librdkit-dev/
-rw-r--r-- root/root       221 2020-05-12 10:21 ./usr/share/doc/librdkit-dev/changelog.Debian.armhf.gz
-rw-r--r-- root/root      4625 2020-05-12 10:21 ./usr/share/doc/librdkit-dev/changelog.Debian.gz
-rw-r--r-- root/root     65510 2019-10-25 03:22 ./usr/share/doc/librdkit-dev/changelog.gz
-rw-r--r-- root/root      6705 2020-05-12 10:21 ./usr/share/doc/librdkit-dev/copyright


librdkit1-dbgsym_201909.1-4+b1_armhf.deb
----------------------------------------

 new Debian package, version 2.0.
 size 79905644 bytes: control archive=2648 bytes.
    2269 bytes,    12 lines      control              
    4982 bytes,    47 lines      md5sums              
 Package: librdkit1-dbgsym
 Source: rdkit (201909.1-4)
 Version: 201909.1-4+b1
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 81571
 Depends: librdkit1 (= 201909.1-4+b1)
 Section: debug
 Priority: optional
 Description: debug symbols for librdkit1
 Build-Ids: 0c0b1f7747580ab303e5be3f1b3fddb021d12aff 103204f2e48b833aed7649659e44090a54d3ef36 1667ab22a5a0df818b973f2fa6d656c519f6b335 1942db0111a8f8ce09ff99f2cd20fbd738618112 1e9450184f9eb87267c7443ce4c090d8b2bf7b30 258f20ebc6f691764215b2f220c363511a6d9739 2b730945b3ce6aed4c6840583202de35f0fb70fa 3e54aa28ff1056796614be405d3456c68e4ee895 445cca447ad3e950259f61e088a89a83681b9591 55c89604f48df9bb7e82c099dea9fe1dc608eb0a 5b53220b3ee39544d5bd39bb210e12a161db4490 5db515ecbb041eae5b47e334f1f0844e3c52d82c 6030ff318d70b94ceefa9af0ce04748ce33d3c9e 64414b1eaebcffb8792d956c7c1ed1c0950a6361 67eb95fc37eeda9c2dcb1c9b65059a83460aa8bf 6803a481fa39ed96d609c3b0085fcea735302f1d 6e30967c673376af66aaa1a473b322412125619c 74249bb114e8a601f280448efe049e02f1274139 75ca954b4d8a1d19feb3dad4a1366c424dc8f01a 7613d2a2f864526c3b499168c28f71b3eca520ed 765a726e0dea8b27d84226ac49fbfab6c35a90c3 773d79d0611e1aa556fd81fdbd97f4db6f2e50a9 7957dea30e5d162ec87de1b7689d2c05c5800239 83af72f5518ed21aeefc42d02d50ececa2739b75 8793a823be1f62c942159700afefa1bd9d497939 897a6b6604cbd0e8e6d97e69d6fede5fb3de54de 8a3e228c342cb9096f4a6cfe83db17dbc5dae840 8f9eee5a94342ef54dc16e89b81806e32907de0a 97332160be14cfe892cf6776bbbe327280131077 9742caea20b73b82ea3adf8ec4f6d58fb4a5ec2a a1131baaa4cf1fe524da65b17e7ba74485fb48ac a21994f02909ef11613b1adea0ba605becd00f3c a3a567cc21a67052b5d95b9990024784c9af994f ad9f4a381e3387bd109f44be97d9e7f7a57ac579 aedfb82c019b564d72968646298150afdc7d74c0 aee38d6043d3ad92b3face503412c51fd0c3bd85 b255b4f50ad008bd1a88c5ead756bb5291ce3790 be3d4046f60be4c1946b92670431fe3d4f6dc6e0 d1df184ecff807144e551d488315709a24715203 e006eb5b5afb3f8df22277057e5fbc9873ab651a e8be7b4b049dbfa5902103adc0176e7e9074c921 ebae2b094b2fcc90e920be1f7fb43a6e18b78cf3 ebe255701ac64698ff65ac1f941a66be2781204c f040e188b536607adde567dc74057f8d8ee368a3 f0fb2d28baec63131b544ed0dac16219c1d58c1c f930fcbf2f4abd303608769fc7dd3c380b5eb54d fdfc83c0450789a0a2ce2427da0a33c221cf4aba

drwxr-xr-x root/root         0 2020-05-12 10:21 ./
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/0c/
-rw-r--r-- root/root   2778168 2020-05-12 10:21 ./usr/lib/debug/.build-id/0c/0b1f7747580ab303e5be3f1b3fddb021d12aff.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/10/
-rw-r--r-- root/root      8116 2020-05-12 10:21 ./usr/lib/debug/.build-id/10/3204f2e48b833aed7649659e44090a54d3ef36.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/16/
-rw-r--r-- root/root     78912 2020-05-12 10:21 ./usr/lib/debug/.build-id/16/67ab22a5a0df818b973f2fa6d656c519f6b335.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/19/
-rw-r--r-- root/root     93760 2020-05-12 10:21 ./usr/lib/debug/.build-id/19/42db0111a8f8ce09ff99f2cd20fbd738618112.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/1e/
-rw-r--r-- root/root    279360 2020-05-12 10:21 ./usr/lib/debug/.build-id/1e/9450184f9eb87267c7443ce4c090d8b2bf7b30.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/25/
-rw-r--r-- root/root    206240 2020-05-12 10:21 ./usr/lib/debug/.build-id/25/8f20ebc6f691764215b2f220c363511a6d9739.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/2b/
-rw-r--r-- root/root    533564 2020-05-12 10:21 ./usr/lib/debug/.build-id/2b/730945b3ce6aed4c6840583202de35f0fb70fa.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/3e/
-rw-r--r-- root/root   1276048 2020-05-12 10:21 ./usr/lib/debug/.build-id/3e/54aa28ff1056796614be405d3456c68e4ee895.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/44/
-rw-r--r-- root/root   1226596 2020-05-12 10:21 ./usr/lib/debug/.build-id/44/5cca447ad3e950259f61e088a89a83681b9591.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/55/
-rw-r--r-- root/root    241060 2020-05-12 10:21 ./usr/lib/debug/.build-id/55/c89604f48df9bb7e82c099dea9fe1dc608eb0a.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/5b/
-rw-r--r-- root/root    771552 2020-05-12 10:21 ./usr/lib/debug/.build-id/5b/53220b3ee39544d5bd39bb210e12a161db4490.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/5d/
-rw-r--r-- root/root   1122312 2020-05-12 10:21 ./usr/lib/debug/.build-id/5d/b515ecbb041eae5b47e334f1f0844e3c52d82c.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/60/
-rw-r--r-- root/root    522768 2020-05-12 10:21 ./usr/lib/debug/.build-id/60/30ff318d70b94ceefa9af0ce04748ce33d3c9e.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/64/
-rw-r--r-- root/root     84708 2020-05-12 10:21 ./usr/lib/debug/.build-id/64/414b1eaebcffb8792d956c7c1ed1c0950a6361.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/67/
-rw-r--r-- root/root    773628 2020-05-12 10:21 ./usr/lib/debug/.build-id/67/eb95fc37eeda9c2dcb1c9b65059a83460aa8bf.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/68/
-rw-r--r-- root/root   2379840 2020-05-12 10:21 ./usr/lib/debug/.build-id/68/03a481fa39ed96d609c3b0085fcea735302f1d.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/6e/
-rw-r--r-- root/root    154056 2020-05-12 10:21 ./usr/lib/debug/.build-id/6e/30967c673376af66aaa1a473b322412125619c.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/74/
-rw-r--r-- root/root   5599224 2020-05-12 10:21 ./usr/lib/debug/.build-id/74/249bb114e8a601f280448efe049e02f1274139.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/75/
-rw-r--r-- root/root   4163188 2020-05-12 10:21 ./usr/lib/debug/.build-id/75/ca954b4d8a1d19feb3dad4a1366c424dc8f01a.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/76/
-rw-r--r-- root/root    442076 2020-05-12 10:21 ./usr/lib/debug/.build-id/76/13d2a2f864526c3b499168c28f71b3eca520ed.debug
-rw-r--r-- root/root    270672 2020-05-12 10:21 ./usr/lib/debug/.build-id/76/5a726e0dea8b27d84226ac49fbfab6c35a90c3.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/77/
-rw-r--r-- root/root   1234228 2020-05-12 10:21 ./usr/lib/debug/.build-id/77/3d79d0611e1aa556fd81fdbd97f4db6f2e50a9.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/79/
-rw-r--r-- root/root   9223328 2020-05-12 10:21 ./usr/lib/debug/.build-id/79/57dea30e5d162ec87de1b7689d2c05c5800239.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/83/
-rw-r--r-- root/root   2370732 2020-05-12 10:21 ./usr/lib/debug/.build-id/83/af72f5518ed21aeefc42d02d50ececa2739b75.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/87/
-rw-r--r-- root/root  11007620 2020-05-12 10:21 ./usr/lib/debug/.build-id/87/93a823be1f62c942159700afefa1bd9d497939.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/89/
-rw-r--r-- root/root    963356 2020-05-12 10:21 ./usr/lib/debug/.build-id/89/7a6b6604cbd0e8e6d97e69d6fede5fb3de54de.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/8a/
-rw-r--r-- root/root   2447156 2020-05-12 10:21 ./usr/lib/debug/.build-id/8a/3e228c342cb9096f4a6cfe83db17dbc5dae840.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/8f/
-rw-r--r-- root/root    774616 2020-05-12 10:21 ./usr/lib/debug/.build-id/8f/9eee5a94342ef54dc16e89b81806e32907de0a.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/97/
-rw-r--r-- root/root   1573836 2020-05-12 10:21 ./usr/lib/debug/.build-id/97/332160be14cfe892cf6776bbbe327280131077.debug
-rw-r--r-- root/root   3269780 2020-05-12 10:21 ./usr/lib/debug/.build-id/97/42caea20b73b82ea3adf8ec4f6d58fb4a5ec2a.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/a1/
-rw-r--r-- root/root    571952 2020-05-12 10:21 ./usr/lib/debug/.build-id/a1/131baaa4cf1fe524da65b17e7ba74485fb48ac.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/a2/
-rw-r--r-- root/root    315232 2020-05-12 10:21 ./usr/lib/debug/.build-id/a2/1994f02909ef11613b1adea0ba605becd00f3c.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/a3/
-rw-r--r-- root/root   2212428 2020-05-12 10:21 ./usr/lib/debug/.build-id/a3/a567cc21a67052b5d95b9990024784c9af994f.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/ad/
-rw-r--r-- root/root   2308172 2020-05-12 10:21 ./usr/lib/debug/.build-id/ad/9f4a381e3387bd109f44be97d9e7f7a57ac579.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/ae/
-rw-r--r-- root/root   1005812 2020-05-12 10:21 ./usr/lib/debug/.build-id/ae/dfb82c019b564d72968646298150afdc7d74c0.debug
-rw-r--r-- root/root   3717088 2020-05-12 10:21 ./usr/lib/debug/.build-id/ae/e38d6043d3ad92b3face503412c51fd0c3bd85.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/b2/
-rw-r--r-- root/root   1182884 2020-05-12 10:21 ./usr/lib/debug/.build-id/b2/55b4f50ad008bd1a88c5ead756bb5291ce3790.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/be/
-rw-r--r-- root/root   3240144 2020-05-12 10:21 ./usr/lib/debug/.build-id/be/3d4046f60be4c1946b92670431fe3d4f6dc6e0.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/d1/
-rw-r--r-- root/root    546840 2020-05-12 10:21 ./usr/lib/debug/.build-id/d1/df184ecff807144e551d488315709a24715203.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/e0/
-rw-r--r-- root/root   1388312 2020-05-12 10:21 ./usr/lib/debug/.build-id/e0/06eb5b5afb3f8df22277057e5fbc9873ab651a.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/e8/
-rw-r--r-- root/root     62060 2020-05-12 10:21 ./usr/lib/debug/.build-id/e8/be7b4b049dbfa5902103adc0176e7e9074c921.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/eb/
-rw-r--r-- root/root    483848 2020-05-12 10:21 ./usr/lib/debug/.build-id/eb/ae2b094b2fcc90e920be1f7fb43a6e18b78cf3.debug
-rw-r--r-- root/root   1217120 2020-05-12 10:21 ./usr/lib/debug/.build-id/eb/e255701ac64698ff65ac1f941a66be2781204c.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/f0/
-rw-r--r-- root/root    144820 2020-05-12 10:21 ./usr/lib/debug/.build-id/f0/40e188b536607adde567dc74057f8d8ee368a3.debug
-rw-r--r-- root/root   1734996 2020-05-12 10:21 ./usr/lib/debug/.build-id/f0/fb2d28baec63131b544ed0dac16219c1d58c1c.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/f9/
-rw-r--r-- root/root   5910776 2020-05-12 10:21 ./usr/lib/debug/.build-id/f9/30fcbf2f4abd303608769fc7dd3c380b5eb54d.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/fd/
-rw-r--r-- root/root   1537540 2020-05-12 10:21 ./usr/lib/debug/.build-id/fd/fc83c0450789a0a2ce2427da0a33c221cf4aba.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/share/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/share/doc/
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/share/doc/librdkit1-dbgsym -> librdkit1


librdkit1_201909.1-4+b1_armhf.deb
---------------------------------

 new Debian package, version 2.0.
 size 2586732 bytes: control archive=2924 bytes.
    1728 bytes,    37 lines      control              
    3999 bytes,    52 lines      md5sums              
    1511 bytes,    47 lines      shlibs               
      63 bytes,     2 lines      triggers             
 Package: librdkit1
 Source: rdkit (201909.1-4)
 Version: 201909.1-4+b1
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 11589
 Depends: libboost-iostreams1.67.0, libboost-python1.67.0, libboost-python1.67.0-py38, libboost-serialization1.67.0, libc6 (>= 2.29), libcoordgen1 (>= 1.4.0), libgcc-s1 (>= 3.5), libmaeparser1 (>= 1.2.3), libpython3.8 (>= 3.8.2), libstdc++6 (>= 9)
 Section: libs
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Collection of cheminformatics and machine-learning software (shared libraries)
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.  Features Include:
  .
   * Chemical reaction handling and transforms
   * Substructure searching with SMARTS
   * Canonical SMILES
   * Molecule-molecule alignment
   * Large number of molecular descriptors, including topological,
     compositional, EState, SlogP/SMR, VSA and Feature-map vectors
   * Fragmentation using RECAP rules
   * 2D coordinate generation and depiction, including constrained depiction
   * 3D coordinate generation using geometry embedding
   * UFF and MMFF94 forcefields
   * Chirality support, including calculation of (R/S) stereochemistry codes
   * 2D pharmacophore searching
   * Fingerprinting, including Daylight-like, atom pairs, topological
     torsions, Morgan algorithm and MACCS keys
   * Calculation of shape similarity
   * Multi-molecule maximum common substructure
   * Machine-learning via clustering and information theory algorithms
   * Gasteiger-Marsili partial charge calculation
  .
  File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit
  binary format.
  .
  This package contains the shared libraries.

drwxr-xr-x root/root         0 2020-05-12 10:21 ./
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitAlignment.so.1 -> libRDKitAlignment.so.1.2019.09.1
-rw-r--r-- root/root     26016 2020-05-12 10:21 ./usr/lib/libRDKitAlignment.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitCatalogs.so.1 -> libRDKitCatalogs.so.1.2019.09.1
-rw-r--r-- root/root      5484 2020-05-12 10:21 ./usr/lib/libRDKitCatalogs.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitChemReactions.so.1 -> libRDKitChemReactions.so.1.2019.09.1
-rw-r--r-- root/root    865696 2020-05-12 10:21 ./usr/lib/libRDKitChemReactions.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitChemTransforms.so.1 -> libRDKitChemTransforms.so.1.2019.09.1
-rw-r--r-- root/root    222624 2020-05-12 10:21 ./usr/lib/libRDKitChemTransforms.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitChemicalFeatures.so.1 -> libRDKitChemicalFeatures.so.1.2019.09.1
-rw-r--r-- root/root      9576 2020-05-12 10:21 ./usr/lib/libRDKitChemicalFeatures.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitDataStructs.so.1 -> libRDKitDataStructs.so.1.2019.09.1
-rw-r--r-- root/root    226720 2020-05-12 10:21 ./usr/lib/libRDKitDataStructs.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitDepictor.so.1 -> libRDKitDepictor.so.1.2019.09.1
-rw-r--r-- root/root    218588 2020-05-12 10:21 ./usr/lib/libRDKitDepictor.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitDescriptors.so.1 -> libRDKitDescriptors.so.1.2019.09.1
-rw-r--r-- root/root    309844 2020-05-12 10:21 ./usr/lib/libRDKitDescriptors.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitDistGeomHelpers.so.1 -> libRDKitDistGeomHelpers.so.1.2019.09.1
-rw-r--r-- root/root    222624 2020-05-12 10:21 ./usr/lib/libRDKitDistGeomHelpers.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitDistGeometry.so.1 -> libRDKitDistGeometry.so.1.2019.09.1
-rw-r--r-- root/root    120224 2020-05-12 10:21 ./usr/lib/libRDKitDistGeometry.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitEigenSolvers.so.1 -> libRDKitEigenSolvers.so.1.2019.09.1
-rw-r--r-- root/root     21920 2020-05-12 10:21 ./usr/lib/libRDKitEigenSolvers.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitFMCS.so.1 -> libRDKitFMCS.so.1.2019.09.1
-rw-r--r-- root/root    247200 2020-05-12 10:21 ./usr/lib/libRDKitFMCS.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitFileParsers.so.1 -> libRDKitFileParsers.so.1.2019.09.1
-rw-r--r-- root/root   1267620 2020-05-12 10:21 ./usr/lib/libRDKitFileParsers.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitFilterCatalog.so.1 -> libRDKitFilterCatalog.so.1.2019.09.1
-rw-r--r-- root/root    783784 2020-05-12 10:21 ./usr/lib/libRDKitFilterCatalog.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitFingerprints.so.1 -> libRDKitFingerprints.so.1.2019.09.1
-rw-r--r-- root/root    370160 2020-05-12 10:21 ./usr/lib/libRDKitFingerprints.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitForceField.so.1 -> libRDKitForceField.so.1.2019.09.1
-rw-r--r-- root/root    611744 2020-05-12 10:21 ./usr/lib/libRDKitForceField.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitForceFieldHelpers.so.1 -> libRDKitForceFieldHelpers.so.1.2019.09.1
-rw-r--r-- root/root    378272 2020-05-12 10:21 ./usr/lib/libRDKitForceFieldHelpers.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitFragCatalog.so.1 -> libRDKitFragCatalog.so.1.2019.09.1
-rw-r--r-- root/root    136608 2020-05-12 10:21 ./usr/lib/libRDKitFragCatalog.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitGraphMol.so.1 -> libRDKitGraphMol.so.1.2019.09.1
-rw-r--r-- root/root   1369504 2020-05-12 10:21 ./usr/lib/libRDKitGraphMol.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitInfoTheory.so.1 -> libRDKitInfoTheory.so.1.2019.09.1
-rw-r--r-- root/root     38304 2020-05-12 10:21 ./usr/lib/libRDKitInfoTheory.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitMMPA.so.1 -> libRDKitMMPA.so.1.2019.09.1
-rw-r--r-- root/root     71072 2020-05-12 10:21 ./usr/lib/libRDKitMMPA.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitMolAlign.so.1 -> libRDKitMolAlign.so.1.2019.09.1
-rw-r--r-- root/root    177568 2020-05-12 10:21 ./usr/lib/libRDKitMolAlign.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitMolCatalog.so.1 -> libRDKitMolCatalog.so.1.2019.09.1
-rw-r--r-- root/root     38304 2020-05-12 10:21 ./usr/lib/libRDKitMolCatalog.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitMolChemicalFeatures.so.1 -> libRDKitMolChemicalFeatures.so.1.2019.09.1
-rw-r--r-- root/root    124320 2020-05-12 10:21 ./usr/lib/libRDKitMolChemicalFeatures.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitMolDraw2D.so.1 -> libRDKitMolDraw2D.so.1.2019.09.1
-rw-r--r-- root/root    374256 2020-05-12 10:21 ./usr/lib/libRDKitMolDraw2D.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitMolHash.so.1 -> libRDKitMolHash.so.1.2019.09.1
-rw-r--r-- root/root    149136 2020-05-12 10:21 ./usr/lib/libRDKitMolHash.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitMolInterchange.so.1 -> libRDKitMolInterchange.so.1.2019.09.1
-rw-r--r-- root/root    206240 2020-05-12 10:21 ./usr/lib/libRDKitMolInterchange.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitMolStandardize.so.1 -> libRDKitMolStandardize.so.1.2019.09.1
-rw-r--r-- root/root    460196 2020-05-12 10:21 ./usr/lib/libRDKitMolStandardize.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitMolTransforms.so.1 -> libRDKitMolTransforms.so.1.2019.09.1
-rw-r--r-- root/root     79264 2020-05-12 10:21 ./usr/lib/libRDKitMolTransforms.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitOptimizer.so.1 -> libRDKitOptimizer.so.1.2019.09.1
-rw-r--r-- root/root      5384 2020-05-12 10:21 ./usr/lib/libRDKitOptimizer.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitPartialCharges.so.1 -> libRDKitPartialCharges.so.1.2019.09.1
-rw-r--r-- root/root     62880 2020-05-12 10:21 ./usr/lib/libRDKitPartialCharges.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitRDBoost.so.1 -> libRDKitRDBoost.so.1.2019.09.1
-rw-r--r-- root/root      9576 2020-05-12 10:21 ./usr/lib/libRDKitRDBoost.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitRDGeneral.so.1 -> libRDKitRDGeneral.so.1.2019.09.1
-rw-r--r-- root/root     95608 2020-05-12 10:21 ./usr/lib/libRDKitRDGeneral.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitRDGeometryLib.so.1 -> libRDKitRDGeometryLib.so.1.2019.09.1
-rw-r--r-- root/root    107940 2020-05-12 10:21 ./usr/lib/libRDKitRDGeometryLib.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitRDStreams.so.1 -> libRDKitRDStreams.so.1.2019.09.1
-rw-r--r-- root/root    103840 2020-05-12 10:21 ./usr/lib/libRDKitRDStreams.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitRGroupDecomposition.so.1 -> libRDKitRGroupDecomposition.so.1.2019.09.1
-rw-r--r-- root/root    169376 2020-05-12 10:21 ./usr/lib/libRDKitRGroupDecomposition.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitReducedGraphs.so.1 -> libRDKitReducedGraphs.so.1.2019.09.1
-rw-r--r-- root/root     66996 2020-05-12 10:21 ./usr/lib/libRDKitReducedGraphs.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitSLNParse.so.1 -> libRDKitSLNParse.so.1.2019.09.1
-rw-r--r-- root/root    329632 2020-05-12 10:21 ./usr/lib/libRDKitSLNParse.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitShapeHelpers.so.1 -> libRDKitShapeHelpers.so.1.2019.09.1
-rw-r--r-- root/root     26016 2020-05-12 10:21 ./usr/lib/libRDKitShapeHelpers.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitSimDivPickers.so.1 -> libRDKitSimDivPickers.so.1.2019.09.1
-rw-r--r-- root/root     21920 2020-05-12 10:21 ./usr/lib/libRDKitSimDivPickers.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitSmilesParse.so.1 -> libRDKitSmilesParse.so.1.2019.09.1
-rw-r--r-- root/root    509344 2020-05-12 10:21 ./usr/lib/libRDKitSmilesParse.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitStructChecker.so.1 -> libRDKitStructChecker.so.1.2019.09.1
-rw-r--r-- root/root    367152 2020-05-12 10:21 ./usr/lib/libRDKitStructChecker.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitSubgraphs.so.1 -> libRDKitSubgraphs.so.1.2019.09.1
-rw-r--r-- root/root     71072 2020-05-12 10:21 ./usr/lib/libRDKitSubgraphs.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitSubstructLibrary.so.1 -> libRDKitSubstructLibrary.so.1.2019.09.1
-rw-r--r-- root/root    423328 2020-05-12 10:21 ./usr/lib/libRDKitSubstructLibrary.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitSubstructMatch.so.1 -> libRDKitSubstructMatch.so.1.2019.09.1
-rw-r--r-- root/root    124320 2020-05-12 10:21 ./usr/lib/libRDKitSubstructMatch.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKitTrajectory.so.1 -> libRDKitTrajectory.so.1.2019.09.1
-rw-r--r-- root/root     62904 2020-05-12 10:21 ./usr/lib/libRDKitTrajectory.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/libRDKithc.so.1 -> libRDKithc.so.1.2019.09.1
-rw-r--r-- root/root      9428 2020-05-12 10:21 ./usr/lib/libRDKithc.so.1.2019.09.1
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/share/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/share/doc/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/share/doc/librdkit1/
-rw-r--r-- root/root       221 2020-05-12 10:21 ./usr/share/doc/librdkit1/changelog.Debian.armhf.gz
-rw-r--r-- root/root      4625 2020-05-12 10:21 ./usr/share/doc/librdkit1/changelog.Debian.gz
-rw-r--r-- root/root     65510 2019-10-25 03:22 ./usr/share/doc/librdkit1/changelog.gz
-rw-r--r-- root/root      6705 2020-05-12 10:21 ./usr/share/doc/librdkit1/copyright
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/share/lintian/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/share/lintian/overrides/
-rw-r--r-- root/root       107 2020-05-12 10:21 ./usr/share/lintian/overrides/librdkit1


postgresql-12-rdkit-dbgsym_201909.1-4+b1_armhf.deb
--------------------------------------------------

 new Debian package, version 2.0.
 size 1133508 bytes: control archive=544 bytes.
     412 bytes,    12 lines      control              
     106 bytes,     1 lines      md5sums              
 Package: postgresql-12-rdkit-dbgsym
 Source: rdkit (201909.1-4)
 Version: 201909.1-4+b1
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 1199
 Depends: postgresql-12-rdkit (= 201909.1-4+b1)
 Section: debug
 Priority: optional
 Description: debug symbols for postgresql-12-rdkit
 Build-Ids: 4d754b0badba2af7352720fa0072231006e0ef3c

drwxr-xr-x root/root         0 2020-05-12 10:21 ./
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/4d/
-rw-r--r-- root/root   1217100 2020-05-12 10:21 ./usr/lib/debug/.build-id/4d/754b0badba2af7352720fa0072231006e0ef3c.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/share/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/share/doc/
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/share/doc/postgresql-12-rdkit-dbgsym -> postgresql-12-rdkit


postgresql-12-rdkit_201909.1-4+b1_armhf.deb
-------------------------------------------

 new Debian package, version 2.0.
 size 438652 bytes: control archive=1720 bytes.
    1577 bytes,    37 lines      control              
    1761 bytes,    21 lines      md5sums              
 Package: postgresql-12-rdkit
 Source: rdkit (201909.1-4)
 Version: 201909.1-4+b1
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 1016
 Depends: libc6 (>= 2.4), libgcc-s1 (>= 3.5), librdkit1, libstdc++6 (>= 9), postgresql-12
 Section: database
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Cheminformatics and machine-learning software (PostgreSQL Cartridge)
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.  Features Include:
  .
   * Chemical reaction handling and transforms
   * Substructure searching with SMARTS
   * Canonical SMILES
   * Molecule-molecule alignment
   * Large number of molecular descriptors, including topological,
     compositional, EState, SlogP/SMR, VSA and Feature-map vectors
   * Fragmentation using RECAP rules
   * 2D coordinate generation and depiction, including constrained depiction
   * 3D coordinate generation using geometry embedding
   * UFF and MMFF94 forcefields
   * Chirality support, including calculation of (R/S) stereochemistry codes
   * 2D pharmacophore searching
   * Fingerprinting, including Daylight-like, atom pairs, topological
     torsions, Morgan algorithm and MACCS keys
   * Calculation of shape similarity
   * Multi-molecule maximum common substructure
   * Machine-learning via clustering and information theory algorithms
   * Gasteiger-Marsili partial charge calculation
  .
  File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit
  binary format.
  .
  This package contains the PostgreSQL extension.

drwxr-xr-x root/root         0 2020-05-12 10:21 ./
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/postgresql/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/postgresql/12/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/postgresql/12/lib/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/postgresql/12/lib/bitcode/
-rw-r--r-- root/root     40568 2020-05-12 10:21 ./usr/lib/postgresql/12/lib/bitcode/rdkit.index.bc
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/postgresql/12/lib/bitcode/rdkit/
-rw-r--r-- root/root    415176 2020-05-12 10:21 ./usr/lib/postgresql/12/lib/bitcode/rdkit/adapter.bc
-rw-r--r-- root/root      7008 2020-05-12 10:21 ./usr/lib/postgresql/12/lib/bitcode/rdkit/bfp_gin.bc
-rw-r--r-- root/root     16236 2020-05-12 10:21 ./usr/lib/postgresql/12/lib/bitcode/rdkit/bfp_gist.bc
-rw-r--r-- root/root     17232 2020-05-12 10:21 ./usr/lib/postgresql/12/lib/bitcode/rdkit/bfp_op.bc
-rw-r--r-- root/root      8168 2020-05-12 10:21 ./usr/lib/postgresql/12/lib/bitcode/rdkit/bitstring.bc
-rw-r--r-- root/root     15632 2020-05-12 10:21 ./usr/lib/postgresql/12/lib/bitcode/rdkit/cache.bc
-rw-r--r-- root/root     14832 2020-05-12 10:21 ./usr/lib/postgresql/12/lib/bitcode/rdkit/guc.bc
-rw-r--r-- root/root     13940 2020-05-12 10:21 ./usr/lib/postgresql/12/lib/bitcode/rdkit/low_gist.bc
-rw-r--r-- root/root     37836 2020-05-12 10:21 ./usr/lib/postgresql/12/lib/bitcode/rdkit/mol_op.bc
-rw-r--r-- root/root     18832 2020-05-12 10:21 ./usr/lib/postgresql/12/lib/bitcode/rdkit/rdkit_gist.bc
-rw-r--r-- root/root     21580 2020-05-12 10:21 ./usr/lib/postgresql/12/lib/bitcode/rdkit/rdkit_io.bc
-rw-r--r-- root/root     10276 2020-05-12 10:21 ./usr/lib/postgresql/12/lib/bitcode/rdkit/rxn_op.bc
-rw-r--r-- root/root     15084 2020-05-12 10:21 ./usr/lib/postgresql/12/lib/bitcode/rdkit/sfp_op.bc
-rw-r--r-- root/root    243212 2020-05-12 10:21 ./usr/lib/postgresql/12/lib/rdkit.so
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/share/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/share/doc/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/share/doc/postgresql-12-rdkit/
-rw-r--r-- root/root       221 2020-05-12 10:21 ./usr/share/doc/postgresql-12-rdkit/changelog.Debian.armhf.gz
-rw-r--r-- root/root      4625 2020-05-12 10:21 ./usr/share/doc/postgresql-12-rdkit/changelog.Debian.gz
-rw-r--r-- root/root     65510 2019-10-25 03:22 ./usr/share/doc/postgresql-12-rdkit/changelog.gz
-rw-r--r-- root/root      6705 2020-05-12 10:21 ./usr/share/doc/postgresql-12-rdkit/copyright
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/share/postgresql/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/share/postgresql/12/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/share/postgresql/12/extension/
-rw-r--r-- root/root     42915 2020-05-12 10:21 ./usr/share/postgresql/12/extension/rdkit--3.8.sql
-rw-r--r-- root/root       135 2020-05-12 10:21 ./usr/share/postgresql/12/extension/rdkit.control


python3-rdkit-dbgsym_201909.1-4+b1_armhf.deb
--------------------------------------------

 new Debian package, version 2.0.
 size 56580188 bytes: control archive=2508 bytes.
    2137 bytes,    13 lines      control              
    4558 bytes,    43 lines      md5sums              
 Package: python3-rdkit-dbgsym
 Source: rdkit (201909.1-4)
 Version: 201909.1-4+b1
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 62446
 Depends: python3-rdkit (= 201909.1-4+b1)
 Section: debug
 Priority: optional
 Description: debug symbols for python3-rdkit
 Build-Ids: 216203037ad9bcf288798b46b32b9b3d47d1af8b 28210cd98ea8ca38653ffb9ef3270d08a439cba8 290157c3490e65c269c62fa43ab80ddb4794abb8 2c2dbb4e3305c05169358aad66064557b9b51689 301b3b3617c4c57090b19331d9f16b677dce3f93 354853965f54f63a2b8257ef018d5a6a53d84a2c 3582a4ecb2d9abefac7e91ce6d47d212338a525b 366d41b9a09bb495047b20319cfa6ba28803af27 4172f603abf768e4e1e9ac9f9803f9a83bab7c81 5055d4e5e354322b95e68ac7d716def894ffca53 54213a81a8770ed8efa7d01bbe70c52b42290e22 57217fc047b904088a89f8d096e9e572f9612758 61c3b69cd2f272d13be898db06695d8630a9d830 6ab52327f330de78ebaac2bd13e5848e1636f07e 706fedbbceb73b464f9d1fbf717ba7180110399f 7534b4b392744e28f8d12357033220cfa3484f6f 7b63591f652ac7544306d035184b71890445ee57 825b49c2a920ccf444c610cf379a1a49482222e0 83d6707b76d2b6ad69ad698471be2f1fce10ef1b 86939bf9067e7c1034fb1f094173e041a651eba5 97d80aded717b0f7427466ff1d31b1bf9e5325bc a0e9099e9add186af7c3203df03e475529673e41 a12cdaa859ff2fd4d31357c385eb8cfe778d3d23 a26c9f288d8ff29a92f391930f8c80565cbf76de a3bac764bdc0a9519db2ed45b6b9f51a4d11f408 a87fa6f196e59f83f736381376b77c6f035c1ee5 ad0b7284668a3c3235b63002c59af961fcaa3a98 b35e72b0abca4613b30e16cd847b27462d2f5dfd bb9211f0468bce19c91f944360089b079a5101b2 bc7a613cad042f0b534e3c643222c0d6c30b3176 be8b51456d82adf251169b755993b6bcf61faffc c284aaca18b7893e75e48e54377fe6746b0a409c c881e8d27969b7ab01690baf72608d2031ecda72 c9af8877acd9fd7d069a33314cccb018b5601291 ce07e89e0893cea5f1ed0c2fdad129b883d8f1ba d1ea09823cf851b3f3c9fcdde588da30a42efdcd d9ef2ff0a4b9f2913788d3c641bbe15c6072bbb0 e140be99598b8ee63cd479c23845c82e30a40773 e2690abc545df9a9edb2324f4ba6b43b9cc96320 e950d144183c08226f80b86662bb2eebba459bf9 f1563c2d5bf4905ddeb26ad3fb3f16fb85b3a4ff f3ba297b7a41d954e190a09989dbc7b42afb6773 f6da3d40956795c826c1e5f0f43aa3bc3e9ad167
 Python-Version: 3.8

drwxr-xr-x root/root         0 2020-05-12 10:21 ./
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/21/
-rw-r--r-- root/root   2163716 2020-05-12 10:21 ./usr/lib/debug/.build-id/21/6203037ad9bcf288798b46b32b9b3d47d1af8b.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/28/
-rw-r--r-- root/root   1579096 2020-05-12 10:21 ./usr/lib/debug/.build-id/28/210cd98ea8ca38653ffb9ef3270d08a439cba8.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/29/
-rw-r--r-- root/root    468492 2020-05-12 10:21 ./usr/lib/debug/.build-id/29/0157c3490e65c269c62fa43ab80ddb4794abb8.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/2c/
-rw-r--r-- root/root    931792 2020-05-12 10:21 ./usr/lib/debug/.build-id/2c/2dbb4e3305c05169358aad66064557b9b51689.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/30/
-rw-r--r-- root/root   1134800 2020-05-12 10:21 ./usr/lib/debug/.build-id/30/1b3b3617c4c57090b19331d9f16b677dce3f93.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/35/
-rw-r--r-- root/root    168284 2020-05-12 10:21 ./usr/lib/debug/.build-id/35/4853965f54f63a2b8257ef018d5a6a53d84a2c.debug
-rw-r--r-- root/root    305216 2020-05-12 10:21 ./usr/lib/debug/.build-id/35/82a4ecb2d9abefac7e91ce6d47d212338a525b.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/36/
-rw-r--r-- root/root    406104 2020-05-12 10:21 ./usr/lib/debug/.build-id/36/6d41b9a09bb495047b20319cfa6ba28803af27.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/41/
-rw-r--r-- root/root    980396 2020-05-12 10:21 ./usr/lib/debug/.build-id/41/72f603abf768e4e1e9ac9f9803f9a83bab7c81.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/50/
-rw-r--r-- root/root    397672 2020-05-12 10:21 ./usr/lib/debug/.build-id/50/55d4e5e354322b95e68ac7d716def894ffca53.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/54/
-rw-r--r-- root/root   1493824 2020-05-12 10:21 ./usr/lib/debug/.build-id/54/213a81a8770ed8efa7d01bbe70c52b42290e22.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/57/
-rw-r--r-- root/root    320872 2020-05-12 10:21 ./usr/lib/debug/.build-id/57/217fc047b904088a89f8d096e9e572f9612758.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/61/
-rw-r--r-- root/root    594036 2020-05-12 10:21 ./usr/lib/debug/.build-id/61/c3b69cd2f272d13be898db06695d8630a9d830.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/6a/
-rw-r--r-- root/root   1131524 2020-05-12 10:21 ./usr/lib/debug/.build-id/6a/b52327f330de78ebaac2bd13e5848e1636f07e.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/70/
-rw-r--r-- root/root   1125276 2020-05-12 10:21 ./usr/lib/debug/.build-id/70/6fedbbceb73b464f9d1fbf717ba7180110399f.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/75/
-rw-r--r-- root/root   2198476 2020-05-12 10:21 ./usr/lib/debug/.build-id/75/34b4b392744e28f8d12357033220cfa3484f6f.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/7b/
-rw-r--r-- root/root    474940 2020-05-12 10:21 ./usr/lib/debug/.build-id/7b/63591f652ac7544306d035184b71890445ee57.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/82/
-rw-r--r-- root/root   1222880 2020-05-12 10:21 ./usr/lib/debug/.build-id/82/5b49c2a920ccf444c610cf379a1a49482222e0.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/83/
-rw-r--r-- root/root   2778536 2020-05-12 10:21 ./usr/lib/debug/.build-id/83/d6707b76d2b6ad69ad698471be2f1fce10ef1b.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/86/
-rw-r--r-- root/root    964992 2020-05-12 10:21 ./usr/lib/debug/.build-id/86/939bf9067e7c1034fb1f094173e041a651eba5.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/97/
-rw-r--r-- root/root    442500 2020-05-12 10:21 ./usr/lib/debug/.build-id/97/d80aded717b0f7427466ff1d31b1bf9e5325bc.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/a0/
-rw-r--r-- root/root    698632 2020-05-12 10:21 ./usr/lib/debug/.build-id/a0/e9099e9add186af7c3203df03e475529673e41.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/a1/
-rw-r--r-- root/root    700008 2020-05-12 10:21 ./usr/lib/debug/.build-id/a1/2cdaa859ff2fd4d31357c385eb8cfe778d3d23.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/a2/
-rw-r--r-- root/root   1967152 2020-05-12 10:21 ./usr/lib/debug/.build-id/a2/6c9f288d8ff29a92f391930f8c80565cbf76de.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/a3/
-rw-r--r-- root/root    380944 2020-05-12 10:21 ./usr/lib/debug/.build-id/a3/bac764bdc0a9519db2ed45b6b9f51a4d11f408.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/a8/
-rw-r--r-- root/root    343924 2020-05-12 10:21 ./usr/lib/debug/.build-id/a8/7fa6f196e59f83f736381376b77c6f035c1ee5.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/ad/
-rw-r--r-- root/root  10732324 2020-05-12 10:21 ./usr/lib/debug/.build-id/ad/0b7284668a3c3235b63002c59af961fcaa3a98.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/b3/
-rw-r--r-- root/root   4711632 2020-05-12 10:21 ./usr/lib/debug/.build-id/b3/5e72b0abca4613b30e16cd847b27462d2f5dfd.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/bb/
-rw-r--r-- root/root   3496888 2020-05-12 10:21 ./usr/lib/debug/.build-id/bb/9211f0468bce19c91f944360089b079a5101b2.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/bc/
-rw-r--r-- root/root   1257040 2020-05-12 10:21 ./usr/lib/debug/.build-id/bc/7a613cad042f0b534e3c643222c0d6c30b3176.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/be/
-rw-r--r-- root/root    940824 2020-05-12 10:21 ./usr/lib/debug/.build-id/be/8b51456d82adf251169b755993b6bcf61faffc.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/c2/
-rw-r--r-- root/root   5550500 2020-05-12 10:21 ./usr/lib/debug/.build-id/c2/84aaca18b7893e75e48e54377fe6746b0a409c.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/c8/
-rw-r--r-- root/root   2730572 2020-05-12 10:21 ./usr/lib/debug/.build-id/c8/81e8d27969b7ab01690baf72608d2031ecda72.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/c9/
-rw-r--r-- root/root    580788 2020-05-12 10:21 ./usr/lib/debug/.build-id/c9/af8877acd9fd7d069a33314cccb018b5601291.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/ce/
-rw-r--r-- root/root    574972 2020-05-12 10:21 ./usr/lib/debug/.build-id/ce/07e89e0893cea5f1ed0c2fdad129b883d8f1ba.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/d1/
-rw-r--r-- root/root    131160 2020-05-12 10:21 ./usr/lib/debug/.build-id/d1/ea09823cf851b3f3c9fcdde588da30a42efdcd.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/d9/
-rw-r--r-- root/root    731740 2020-05-12 10:21 ./usr/lib/debug/.build-id/d9/ef2ff0a4b9f2913788d3c641bbe15c6072bbb0.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/e1/
-rw-r--r-- root/root    376380 2020-05-12 10:21 ./usr/lib/debug/.build-id/e1/40be99598b8ee63cd479c23845c82e30a40773.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/e2/
-rw-r--r-- root/root    819500 2020-05-12 10:21 ./usr/lib/debug/.build-id/e2/690abc545df9a9edb2324f4ba6b43b9cc96320.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/e9/
-rw-r--r-- root/root   4253756 2020-05-12 10:21 ./usr/lib/debug/.build-id/e9/50d144183c08226f80b86662bb2eebba459bf9.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/f1/
-rw-r--r-- root/root    500388 2020-05-12 10:21 ./usr/lib/debug/.build-id/f1/563c2d5bf4905ddeb26ad3fb3f16fb85b3a4ff.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/f3/
-rw-r--r-- root/root    716264 2020-05-12 10:21 ./usr/lib/debug/.build-id/f3/ba297b7a41d954e190a09989dbc7b42afb6773.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/debug/.build-id/f6/
-rw-r--r-- root/root    388260 2020-05-12 10:21 ./usr/lib/debug/.build-id/f6/da3d40956795c826c1e5f0f43aa3bc3e9ad167.debug
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/share/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/share/doc/
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/share/doc/python3-rdkit-dbgsym -> python3-rdkit


python3-rdkit_201909.1-4+b1_armhf.deb
-------------------------------------

 new Debian package, version 2.0.
 size 2727920 bytes: control archive=12524 bytes.
    1823 bytes,    38 lines      control              
   44655 bytes,   451 lines      md5sums              
     251 bytes,    12 lines   *  postinst             #!/bin/sh
     400 bytes,    12 lines   *  prerm                #!/bin/sh
 Package: python3-rdkit
 Source: rdkit (201909.1-4)
 Version: 201909.1-4+b1
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 16482
 Depends: fonts-freefont-ttf, rdkit-data, python3 (<< 3.9), python3 (>= 3.8~), python3-numpy (>= 1:1.16.0~rc1), python3-numpy-abi9, python3:any, libboost-python1.67.0, libboost-python1.67.0-py38, libc6 (>= 2.29), libcoordgen1 (>= 1.4.0), libgcc-s1 (>= 3.5), libmaeparser1 (>= 1.2.3), libpython3.8 (>= 3.8.2), librdkit1, libstdc++6 (>= 9)
 Suggests: rdkit-doc
 Provides: python3.8-rdkit
 Section: python
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Collection of cheminformatics and machine-learning software
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.  Features Include:
  .
   * Chemical reaction handling and transforms
   * Substructure searching with SMARTS
   * Canonical SMILES
   * Molecule-molecule alignment
   * Large number of molecular descriptors, including topological,
     compositional, EState, SlogP/SMR, VSA and Feature-map vectors
   * Fragmentation using RECAP rules
   * 2D coordinate generation and depiction, including constrained depiction
   * 3D coordinate generation using geometry embedding
   * UFF and MMFF94 forcefields
   * Chirality support, including calculation of (R/S) stereochemistry codes
   * 2D pharmacophore searching
   * Fingerprinting, including Daylight-like, atom pairs, topological
     torsions, Morgan algorithm and MACCS keys
   * Calculation of shape similarity
   * Multi-molecule maximum common substructure
   * Machine-learning via clustering and information theory algorithms
   * Gasteiger-Marsili partial charge calculation
  .
  File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit
  binary format.
 Python-Version: 3.8

drwxr-xr-x root/root         0 2020-05-12 10:21 ./
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Avalon/
-rw-r--r-- root/root         0 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Avalon/__init__.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/
-rw-r--r-- root/root     16547 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/AllChem.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/AtomPairs/
-rw-r--r-- root/root      5642 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/AtomPairs/Pairs.py
-rw-r--r-- root/root      3280 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/AtomPairs/Sheridan.py
-rw-r--r-- root/root      5371 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/AtomPairs/Torsions.py
-rw-r--r-- root/root      9279 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/AtomPairs/Utils.py
-rw-r--r-- root/root         0 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/AtomPairs/__init__.py
-rw-r--r-- root/root     35663 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/BRICS.py
-rw-r--r-- root/root     20973 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/BuildFragmentCatalog.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/ChemUtils/
-rw-r--r-- root/root      2957 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/ChemUtils/AlignDepict.py
-rw-r--r-- root/root      1974 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/ChemUtils/BulkTester.py
-rw-r--r-- root/root       521 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/ChemUtils/DescriptorUtilities.py
-rw-r--r-- root/root      2530 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/ChemUtils/SDFToCSV.py
-rw-r--r-- root/root     14372 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/ChemUtils/TemplateExpand.py
-rw-r--r-- root/root         0 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/ChemUtils/__init__.py
-rw-r--r-- root/root       719 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/ChemicalFeatures.py
-rw-r--r-- root/root       363 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/ChemicalForceFields.py
-rw-r--r-- root/root      6112 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Crippen.py
-rw-r--r-- root/root     12113 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/DSViewer.py
-rw-r--r-- root/root      7248 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Descriptors.py
-rw-r--r-- root/root      5880 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Descriptors3D.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/Draw/
lrwxrwxrwx root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/Draw/FreeSans.ttf -> ../../../../../../share/fonts/truetype/freefont/FreeSans.ttf
-rw-r--r-- root/root      9892 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Draw/IPythonConsole.py
-rw-r--r-- root/root     22104 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Draw/MolDrawing.py
-rw-r--r-- root/root     18047 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Draw/SimilarityMaps.py
-rw-r--r-- root/root     29771 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Draw/__init__.py
-rw-r--r-- root/root      5948 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Draw/aggCanvas.py
-rw-r--r-- root/root     16369 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Draw/cairoCanvas.py
-rw-r--r-- root/root      2571 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Draw/canvasbase.py
-rw-r--r-- root/root      3481 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Draw/mplCanvas.py
-rw-r--r-- root/root      3567 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Draw/qtCanvas.py
-rw-r--r-- root/root    529812 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/Draw/rdMolDraw2D.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root      3631 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Draw/spingCanvas.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/EState/
-rw-r--r-- root/root      4018 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/EState/AtomTypes.py
-rw-r--r-- root/root      2532 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/EState/EState.py
-rw-r--r-- root/root      3549 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/EState/EState_VSA.py
-rw-r--r-- root/root      2137 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/EState/Fingerprinter.py
-rw-r--r-- root/root       386 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/EState/__init__.py
-rw-r--r-- root/root     12069 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/EnumerateHeterocycles.py
-rw-r--r-- root/root     13803 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/EnumerateStereoisomers.py
-rw-r--r-- root/root       498 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/FastSDMolSupplier.py
-rw-r--r-- root/root      3328 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/FeatFinderCLI.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/FeatMaps/
-rw-r--r-- root/root      5307 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/FeatMaps/FeatMapParser.py
-rw-r--r-- root/root      3283 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/FeatMaps/FeatMapPoint.py
-rw-r--r-- root/root      7261 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/FeatMaps/FeatMapUtils.py
-rw-r--r-- root/root      7458 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/FeatMaps/FeatMaps.py
-rw-r--r-- root/root         0 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/FeatMaps/__init__.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/Features/
-rw-r--r-- root/root     12294 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Features/FeatDirUtilsRD.py
-rw-r--r-- root/root     12210 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Features/ShowFeats.py
-rw-r--r-- root/root         0 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Features/__init__.py
-rw-r--r-- root/root      2162 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/FilterCatalog.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/Fingerprints/
-rw-r--r-- root/root      5671 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Fingerprints/ClusterMols.py
-rw-r--r-- root/root      4652 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Fingerprints/DbFpSupplier.py
-rw-r--r-- root/root     17540 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Fingerprints/FingerprintMols.py
-rw-r--r-- root/root     10299 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Fingerprints/MolSimilarity.py
-rw-r--r-- root/root      5016 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Fingerprints/SimilarityScreener.py
-rw-r--r-- root/root        67 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Fingerprints/__init__.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/Fraggle/
-rw-r--r-- root/root     14463 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Fraggle/FraggleSim.py
-rw-r--r-- root/root         0 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Fraggle/__init__.py
-rw-r--r-- root/root      2420 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/FragmentCatalog.py
-rw-r--r-- root/root      2264 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/FragmentMatcher.py
-rw-r--r-- root/root      1619 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Fragments.py
-rw-r--r-- root/root      5470 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/FunctionalGroups.py
-rw-r--r-- root/root     20296 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/GraphDescriptors.py
-rw-r--r-- root/root      1365 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Graphs.py
-rw-r--r-- root/root      4135 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Lipinski.py
-rw-r--r-- root/root     11754 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/MACCSkeys.py
-rw-r--r-- root/root     17305 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/MCS.py
-rw-r--r-- root/root        84 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/MolCatalog.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/MolDb/
-rw-r--r-- root/root      3728 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/MolDb/FingerprintUtils.py
-rw-r--r-- root/root       408 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/MolDb/Loader.py
-rw-r--r-- root/root      6741 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/MolDb/Loader_orig.py
-rw-r--r-- root/root      6245 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/MolDb/Loader_sa.py
-rw-r--r-- root/root         0 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/MolDb/__init__.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/MolKey/
-rw-r--r-- root/root      7302 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/MolKey/InchiInfo.py
-rw-r--r-- root/root     15512 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/MolKey/MolKey.py
-rw-r--r-- root/root         0 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/MolKey/__init__.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/
-rw-r--r-- root/root       928 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/__init__.py
-rw-r--r-- root/root     15148 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/charge.py
-rw-r--r-- root/root       478 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/errors.py
-rw-r--r-- root/root     11295 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/fragment.py
-rw-r--r-- root/root      3086 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/metal.py
-rw-r--r-- root/root      9676 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/normalize.py
-rw-r--r-- root/root    446440 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/rdMolStandardize.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root      3753 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/resonance.py
-rw-r--r-- root/root     14390 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/standardize.py
-rw-r--r-- root/root     17822 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/tautomer.py
-rw-r--r-- root/root       786 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/test_standardizer.py
-rw-r--r-- root/root       748 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/utils.py
-rw-r--r-- root/root      4196 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/validate.py
-rw-r--r-- root/root      7169 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/validations.py
-rw-r--r-- root/root     14675 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/MolSurf.py
-rw-r--r-- root/root     27538 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/PandasTools.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/
-rw-r--r-- root/root      5053 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/Generate.py
-rw-r--r-- root/root      1901 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/Gobbi_Pharm2D.py
-rw-r--r-- root/root      4270 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/LazyGenerator.py
-rw-r--r-- root/root      4042 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/Matcher.py
-rw-r--r-- root/root     11319 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/SigFactory.py
-rw-r--r-- root/root     13122 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/Utils.py
-rw-r--r-- root/root       888 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/__init__.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/Pharm3D/
-rw-r--r-- root/root     40102 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Pharm3D/EmbedLib.py
-rw-r--r-- root/root       918 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Pharm3D/ExcludedVolume.py
-rw-r--r-- root/root      5917 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Pharm3D/Pharmacophore.py
-rw-r--r-- root/root         0 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Pharm3D/__init__.py
-rw-r--r-- root/root      3184 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/PropertyMol.py
-rw-r--r-- root/root      8405 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/PyMol.py
-rw-r--r-- root/root     11697 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/QED.py
-rw-r--r-- root/root      1788 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Randomize.py
-rw-r--r-- root/root     24160 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Recap.py
-rw-r--r-- root/root       562 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/ReducedGraphs.py
-rw-r--r-- root/root      2807 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/SATIS.py
-rw-r--r-- root/root     10606 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/SaltRemover.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/Scaffolds/
-rw-r--r-- root/root      4158 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Scaffolds/MurckoScaffold.py
-rw-r--r-- root/root         0 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Scaffolds/__init__.py
-rw-r--r-- root/root       931 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/ShowMols.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/SimpleEnum/
-rw-r--r-- root/root      8962 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/SimpleEnum/Enumerator.py
-rw-r--r-- root/root         0 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/SimpleEnum/__init__.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/Subshape/
-rw-r--r-- root/root     10858 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Subshape/BuilderUtils.py
-rw-r--r-- root/root     13373 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Subshape/SubshapeAligner.py
-rw-r--r-- root/root      4199 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Subshape/SubshapeBuilder.py
-rw-r--r-- root/root      2412 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Subshape/SubshapeObjects.py
-rw-r--r-- root/root         0 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Subshape/__init__.py
-rw-r--r-- root/root      1679 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Subshape/testCombined.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/Suppliers/
-rw-r--r-- root/root      4093 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Suppliers/DbMolSupplier.py
-rw-r--r-- root/root       851 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Suppliers/MolSupplier.py
-rw-r--r-- root/root         0 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/Suppliers/__init__.py
-rw-r--r-- root/root      3288 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/TemplateAlign.py
-rw-r--r-- root/root     24314 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/TorsionFingerprints.py
-rw-r--r-- root/root      3631 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/__init__.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/fmcs/
-rw-r--r-- root/root       141 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/fmcs/__init__.py
-rw-r--r-- root/root       152 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/fmcs/fmcs
-rw-r--r-- root/root    105638 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Chem/fmcs/fmcs.py
-rw-r--r-- root/root      1686 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/inchi.py
-rw-r--r-- root/root   1209228 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/rdChemReactions.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root     96264 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/rdChemicalFeatures.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root    112684 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/rdCoordGen.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root     79772 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/rdDepictor.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root    182904 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/rdDistGeom.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root    191204 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/rdFMCS.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root    253088 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/rdFingerprintGenerator.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root    162412 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/rdForceFieldHelpers.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root     55040 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/rdMMPA.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root    211744 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/rdMolAlign.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root    178532 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/rdMolCatalog.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root    166148 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/rdMolChemicalFeatures.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root    467904 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/rdMolDescriptors.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root     38488 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/rdMolHash.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root     67316 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/rdMolInterchange.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root    112912 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/rdMolTransforms.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root     22032 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/rdPartialCharges.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root    215732 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/rdRGroupDecomposition.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root     42608 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/rdReducedGraphs.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root     38428 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/rdSLNParse.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root    116936 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/rdShapeHelpers.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root    120960 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/rdStructChecker.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root    290136 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/rdSubstructLibrary.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root   2432500 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/rdchem.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root    977652 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/rdfiltercatalog.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root    219672 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/rdfragcatalog.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root    950128 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/rdmolfiles.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root    542208 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/rdmolops.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root    256380 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/rdqueries.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root    129392 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Chem/rdtrajectory.cpython-38-arm-linux-gnueabihf.so
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/DataManip/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/DataManip/Metric/
-rw-r--r-- root/root       363 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/DataManip/Metric/__init__.py
-rw-r--r-- root/root     58884 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/DataManip/Metric/rdMetricMatrixCalc.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root        21 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/DataManip/__init__.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/DataStructs/
-rw-r--r-- root/root      1192 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/DataStructs/BitEnsemble.py
-rw-r--r-- root/root      1569 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/DataStructs/BitEnsembleDb.py
-rw-r--r-- root/root      1132 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/DataStructs/BitUtils.py
-rw-r--r-- root/root      3876 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/DataStructs/HierarchyVis.py
-rw-r--r-- root/root      1472 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/DataStructs/LazySignature.py
-rw-r--r-- root/root      2037 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/DataStructs/TopNContainer.py
-rw-r--r-- root/root      6943 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/DataStructs/VectCollection.py
-rw-r--r-- root/root      1628 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/DataStructs/__init__.py
-rw-r--r-- root/root   1129360 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/DataStructs/cDataStructs.cpython-38-arm-linux-gnueabihf.so
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Dbase/
-rw-r--r-- root/root      7972 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Dbase/DbConnection.py
-rw-r--r-- root/root      5758 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Dbase/DbInfo.py
-rw-r--r-- root/root      2146 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Dbase/DbModule.py
-rw-r--r-- root/root      7307 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Dbase/DbReport.py
-rw-r--r-- root/root      6092 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Dbase/DbResultSet.py
-rw-r--r-- root/root     14536 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Dbase/DbUtils.py
-rw-r--r-- root/root      7588 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Dbase/StorageUtils.py
-rw-r--r-- root/root       340 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Dbase/__init__.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/DistanceGeometry/
-rw-r--r-- root/root     67196 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/DistanceGeometry/DistGeom.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root        46 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/DistanceGeometry/__init__.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/ForceField/
-rw-r--r-- root/root        44 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ForceField/__init__.py
-rw-r--r-- root/root    265520 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/ForceField/rdForceField.cpython-38-arm-linux-gnueabihf.so
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Geometry/
-rw-r--r-- root/root       109 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Geometry/__init__.py
-rw-r--r-- root/root    431568 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Geometry/rdGeometry.cpython-38-arm-linux-gnueabihf.so
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/ML/
-rw-r--r-- root/root      9361 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/AnalyzeComposite.py
-rw-r--r-- root/root     35858 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/BuildComposite.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/ML/Cluster/
-rw-r--r-- root/root      3502 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/Cluster/Butina.py
-rw-r--r-- root/root      4413 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/Cluster/ClusterUtils.py
-rw-r--r-- root/root     15377 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/Cluster/ClusterVis.py
-rw-r--r-- root/root     26224 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/ML/Cluster/Clustering.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root      8567 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/Cluster/Clusters.py
-rw-r--r-- root/root      3184 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/Cluster/Murtagh.py
-rw-r--r-- root/root      3255 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/Cluster/Resemblance.py
-rw-r--r-- root/root       675 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/Cluster/Standardize.py
-rw-r--r-- root/root         0 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/Cluster/__init__.py
-rw-r--r-- root/root       890 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/Cluster/murtagh_test.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/ML/Composite/
-rw-r--r-- root/root      2591 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/Composite/AdjustComposite.py
-rw-r--r-- root/root      4921 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/Composite/BayesComposite.py
-rw-r--r-- root/root     20577 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/Composite/Composite.py
-rw-r--r-- root/root         0 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/Composite/__init__.py
-rw-r--r-- root/root      6898 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/CompositeRun.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/ML/Data/
-rw-r--r-- root/root     19128 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/Data/DataUtils.py
-rw-r--r-- root/root      1655 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/Data/FindQuantBounds.py
-rw-r--r-- root/root     11150 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/Data/MLData.py
-rw-r--r-- root/root     11308 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/Data/Quantize.py
-rw-r--r-- root/root      8813 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/Data/SplitData.py
-rw-r--r-- root/root      6715 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/Data/Stats.py
-rw-r--r-- root/root       877 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/Data/Transforms.py
-rw-r--r-- root/root         0 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/Data/__init__.py
-rw-r--r-- root/root     34440 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/ML/Data/cQuantize.cpython-38-arm-linux-gnueabihf.so
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/ML/DecTree/
-rw-r--r-- root/root     13414 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/DecTree/BuildQuantTree.py
-rw-r--r-- root/root      7533 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/DecTree/BuildSigTree.py
-rw-r--r-- root/root      6944 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/DecTree/CrossValidate.py
-rw-r--r-- root/root      3365 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/DecTree/DecTree.py
-rw-r--r-- root/root      7869 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/DecTree/Forest.py
-rw-r--r-- root/root      6700 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/DecTree/ID3.py
-rw-r--r-- root/root      9403 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/DecTree/PruneTree.py
-rw-r--r-- root/root      2518 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/DecTree/QuantTree.py
-rw-r--r-- root/root      1772 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/DecTree/SigTree.py
-rw-r--r-- root/root      7523 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/DecTree/Tree.py
-rw-r--r-- root/root       775 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/DecTree/TreeUtils.py
-rw-r--r-- root/root      6394 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/DecTree/TreeVis.py
-rw-r--r-- root/root       149 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/DecTree/__init__.py
-rw-r--r-- root/root      1003 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/DecTree/randomtest.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/ML/Descriptors/
-rw-r--r-- root/root     14136 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/Descriptors/CompoundDescriptors.py
-rw-r--r-- root/root      1553 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/Descriptors/Descriptors.py
-rw-r--r-- root/root      3246 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/Descriptors/MoleculeDescriptors.py
-rw-r--r-- root/root     12436 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/Descriptors/Parser.py
-rw-r--r-- root/root         0 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/Descriptors/__init__.py
-rw-r--r-- root/root     16240 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/EnrichPlot.py
-rw-r--r-- root/root     19738 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/GrowComposite.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/ML/InfoTheory/
-rw-r--r-- root/root      2321 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/InfoTheory/BitClusterer.py
-rw-r--r-- root/root      5487 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/InfoTheory/BitRank.py
-rw-r--r-- root/root        89 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/InfoTheory/__init__.py
-rw-r--r-- root/root      2819 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/InfoTheory/entropy.py
-rw-r--r-- root/root    124900 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/ML/InfoTheory/rdInfoTheory.cpython-38-arm-linux-gnueabihf.so
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/ML/KNN/
-rw-r--r-- root/root      3874 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/KNN/CrossValidate.py
-rw-r--r-- root/root      1427 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/KNN/DistFunctions.py
-rw-r--r-- root/root      1992 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/KNN/KNNClassificationModel.py
-rw-r--r-- root/root      2233 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/KNN/KNNModel.py
-rw-r--r-- root/root      1998 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/KNN/KNNRegressionModel.py
-rw-r--r-- root/root        92 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/KNN/__init__.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/ML/MLUtils/
-rw-r--r-- root/root      6144 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/MLUtils/VoteImg.py
-rw-r--r-- root/root         0 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/MLUtils/__init__.py
-rw-r--r-- root/root       776 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/MatOps.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/ML/ModelPackage/
-rw-r--r-- root/root      4936 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/ModelPackage/PackageUtils.py
-rw-r--r-- root/root      2513 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/ModelPackage/Packager.py
-rw-r--r-- root/root         0 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/ModelPackage/__init__.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/ML/NaiveBayes/
-rw-r--r-- root/root     10123 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/NaiveBayes/ClassificationModel.py
-rw-r--r-- root/root      2660 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/NaiveBayes/CrossValidate.py
-rw-r--r-- root/root       124 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/NaiveBayes/__init__.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/ML/Neural/
-rw-r--r-- root/root      1413 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/Neural/ActFuncs.py
-rw-r--r-- root/root      3924 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/Neural/CrossValidate.py
-rw-r--r-- root/root      4169 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/Neural/NetNode.py
-rw-r--r-- root/root      7342 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/Neural/Network.py
-rw-r--r-- root/root      7994 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/Neural/Trainers.py
-rw-r--r-- root/root         0 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/Neural/__init__.py
-rw-r--r-- root/root       617 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/Neural/architecture.txt
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/ML/SLT/
-rw-r--r-- root/root      3059 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/SLT/Risk.py
-rw-r--r-- root/root         0 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/SLT/__init__.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/ML/Scoring/
-rw-r--r-- root/root      6384 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/Scoring/Scoring.py
-rw-r--r-- root/root         0 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/Scoring/__init__.py
-rw-r--r-- root/root     55093 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/ScreenComposite.py
-rw-r--r-- root/root       340 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/__init__.py
-rw-r--r-- root/root      2496 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/ML/files.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Numerics/
-rw-r--r-- root/root        91 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/Numerics/__init__.py
-rw-r--r-- root/root     63028 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/Numerics/rdAlignment.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root      2146 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/RDConfig.py
-rw-r--r-- root/root      1622 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/RDLogger.py
-rw-r--r-- root/root       436 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/RDPaths.py
-rw-r--r-- root/root       480 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/RDRandom.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/SimDivFilters/
-rw-r--r-- root/root      7306 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/SimDivFilters/SimilarityPickers.py
-rw-r--r-- root/root       252 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/SimDivFilters/__init__.py
-rw-r--r-- root/root    161956 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/SimDivFilters/rdSimDivPickers.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root      9353 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/TestRunner.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/VLib/
-rw-r--r-- root/root      2932 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/VLib/Filter.py
-rw-r--r-- root/root      4826 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/VLib/Node.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/
-rw-r--r-- root/root      1681 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/DbMolSupply.py
-rw-r--r-- root/root      5730 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/DbPickleSupplier.py
-rw-r--r-- root/root      1443 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/SDSupply.py
-rw-r--r-- root/root      2668 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/SmartsMolFilter.py
-rw-r--r-- root/root      3877 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/SmartsRemover.py
-rw-r--r-- root/root      1497 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/SmilesDupeFilter.py
-rw-r--r-- root/root      2131 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/SmilesOutput.py
-rw-r--r-- root/root      1967 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/SmilesSupply.py
-rw-r--r-- root/root        95 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/__init__.py
-rw-r--r-- root/root      2008 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/demo.py
-rw-r--r-- root/root      1739 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/VLib/Output.py
-rw-r--r-- root/root      1583 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/VLib/Supply.py
-rw-r--r-- root/root      2129 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/VLib/Transform.py
-rw-r--r-- root/root        13 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/VLib/__init__.py
-rw-r--r-- root/root       478 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/__init__.py
-rw-r--r-- root/root    775536 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/rdBase.cpython-38-arm-linux-gnueabihf.so
-rw-r--r-- root/root     23799 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/six.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/sping/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/sping/PDF/
-rw-r--r-- root/root        22 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PDF/__init__.py
-rw-r--r-- root/root     15575 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PDF/pdfdoc.py
-rw-r--r-- root/root     38282 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PDF/pdfgen.py
-rw-r--r-- root/root      2413 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PDF/pdfgeom.py
-rw-r--r-- root/root     20538 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PDF/pdfmetrics.py
-rw-r--r-- root/root     10525 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PDF/pdfutils.py
-rw-r--r-- root/root     25105 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PDF/pidPDF.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/
-rw-r--r-- root/root        32 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/__init__.py
-rw-r--r-- root/root     15699 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pidPIL.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/
-rw-r--r-- root/root       990 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-10.pbm
-rw-r--r-- root/root      5143 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-10.pil
-rw-r--r-- root/root      1254 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-12.pbm
-rw-r--r-- root/root      5143 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-12.pil
-rw-r--r-- root/root      1540 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-14.pbm
-rw-r--r-- root/root      5143 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-14.pil
-rw-r--r-- root/root      1960 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-18.pbm
-rw-r--r-- root/root      5143 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-18.pil
-rw-r--r-- root/root      2829 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-24.pbm
-rw-r--r-- root/root      5143 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-24.pil
-rw-r--r-- root/root       731 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-8.pbm
-rw-r--r-- root/root      5142 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-8.pil
-rw-r--r-- root/root      5142 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-8.pil.1
-rw-r--r-- root/root      1087 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-10.pbm
-rw-r--r-- root/root      5143 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-10.pil
-rw-r--r-- root/root      1370 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-12.pbm
-rw-r--r-- root/root      5143 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-12.pil
-rw-r--r-- root/root      1667 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-14.pbm
-rw-r--r-- root/root      5143 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-14.pil
-rw-r--r-- root/root      2336 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-18.pbm
-rw-r--r-- root/root      5143 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-18.pil
-rw-r--r-- root/root      3316 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-24.pbm
-rw-r--r-- root/root      5143 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-24.pil
-rw-r--r-- root/root       733 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-8.pbm
-rw-r--r-- root/root      5142 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-8.pil
-rw-r--r-- root/root      1060 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-10.pbm
-rw-r--r-- root/root      5143 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-10.pil
-rw-r--r-- root/root      1216 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-12.pbm
-rw-r--r-- root/root      5143 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-12.pil
-rw-r--r-- root/root      1566 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-14.pbm
-rw-r--r-- root/root      5143 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-14.pil
-rw-r--r-- root/root      2324 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-18.pbm
-rw-r--r-- root/root      5143 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-18.pil
-rw-r--r-- root/root      3465 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-24.pbm
-rw-r--r-- root/root      5143 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-24.pil
-rw-r--r-- root/root       800 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-8.pbm
-rw-r--r-- root/root      5142 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-8.pil
-rw-r--r-- root/root      1141 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-10.pbm
-rw-r--r-- root/root      5143 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-10.pil
-rw-r--r-- root/root      1399 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-12.pbm
-rw-r--r-- root/root      5143 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-12.pil
-rw-r--r-- root/root      1698 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-14.pbm
-rw-r--r-- root/root      5143 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-14.pil
-rw-r--r-- root/root      2504 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-18.pbm
-rw-r--r-- root/root      5143 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-18.pil
-rw-r--r-- root/root      3575 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-24.pbm
-rw-r--r-- root/root      5143 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-24.pil
-rw-r--r-- root/root       823 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-8.pbm
-rw-r--r-- root/root      5142 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-8.pil
-rw-r--r-- root/root     41265 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/metrics.dat
-rw-r--r-- root/root       213 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/removemedium.py
-rw-r--r-- root/root      1075 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-10.pbm
-rw-r--r-- root/root      5143 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-10.pil
-rw-r--r-- root/root      1386 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-12.pbm
-rw-r--r-- root/root      5143 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-12.pil
-rw-r--r-- root/root      1641 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-14.pbm
-rw-r--r-- root/root      5143 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-14.pil
-rw-r--r-- root/root      2361 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-18.pbm
-rw-r--r-- root/root      5143 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-18.pil
-rw-r--r-- root/root      3404 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-24.pbm
-rw-r--r-- root/root      5143 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-24.pil
-rw-r--r-- root/root       813 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-8.pbm
-rw-r--r-- root/root      5143 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-8.pil
-rw-r--r-- root/root      1002 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-10.pbm
-rw-r--r-- root/root      5143 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-10.pil
-rw-r--r-- root/root      1325 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-12.pbm
-rw-r--r-- root/root      5143 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-12.pil
-rw-r--r-- root/root      1588 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-14.pbm
-rw-r--r-- root/root      5143 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-14.pil
-rw-r--r-- root/root      2305 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-18.pbm
-rw-r--r-- root/root      5143 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-18.pil
-rw-r--r-- root/root      3313 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-24.pbm
-rw-r--r-- root/root      5143 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-24.pil
-rw-r--r-- root/root       703 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-8.pbm
-rw-r--r-- root/root      5142 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-8.pil
-rw-r--r-- root/root      1101 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-10.pbm
-rw-r--r-- root/root      5143 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-10.pil
-rw-r--r-- root/root      1418 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-12.pbm
-rw-r--r-- root/root      5143 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-12.pil
-rw-r--r-- root/root      1740 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-14.pbm
-rw-r--r-- root/root      5143 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-14.pil
-rw-r--r-- root/root      2495 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-18.pbm
-rw-r--r-- root/root      5143 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-18.pil
-rw-r--r-- root/root      3605 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-24.pbm
-rw-r--r-- root/root      5143 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-24.pil
-rw-r--r-- root/root       764 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-8.pbm
-rw-r--r-- root/root      5142 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-8.pil
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/sping/PS/
-rw-r--r-- root/root        31 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PS/__init__.py
-rw-r--r-- root/root       334 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PS/fontinfo.py
-rw-r--r-- root/root     18888 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PS/latin1MetricsCache.py
-rw-r--r-- root/root     35408 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PS/pidPS.py
-rw-r--r-- root/root     17605 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/PS/psmetrics.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/sping/Pyart/
-rw-r--r-- root/root      3678 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/Pyart/Fontmapping.py
-rw-r--r-- root/root        40 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/Pyart/__init__.py
-rw-r--r-- root/root      8279 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/Pyart/pidPyart.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/sping/Qt/
-rw-r--r-- root/root         0 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/Qt/__init__.py
-rw-r--r-- root/root     11286 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/Qt/pidQt.py
-rw-r--r-- root/root     10747 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/Qt/pidQt4.py
-rw-r--r-- root/root      1939 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/README
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/sping/ReportLab/
-rw-r--r-- root/root         0 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/ReportLab/__init__.py
-rw-r--r-- root/root     10481 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/ReportLab/pidReportLab.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/sping/SVG/
-rw-r--r-- root/root        44 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/SVG/__init__.py
-rw-r--r-- root/root     23751 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/SVG/pidSVG.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/sping/TK/
-rw-r--r-- root/root        20 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/TK/__init__.py
-rw-r--r-- root/root     16441 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/TK/pidTK.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/sping/WX/
-rw-r--r-- root/root        20 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/WX/__init__.py
-rw-r--r-- root/root     12749 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/WX/pidWX.py
-rw-r--r-- root/root      8789 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/WX/pidWxDc.py
-rw-r--r-- root/root       154 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/__init__.py
-rw-r--r-- root/root      7117 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/colors.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/sping/examples/
-rw-r--r-- root/root      1271 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/examples/formatted-strings.py
-rw-r--r-- root/root      2611 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/examples/tkCanvas-with-scrollbars.py
-rw-r--r-- root/root      2608 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/examples/tkCanvasPIL-with-scrollbars.py
-rw-r--r-- root/root       600 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/pagesizes.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/sping/patches/
-rw-r--r-- root/root      1197 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/patches/Imaging-1.1-fixplugin-path
-rw-r--r-- root/root       854 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/patches/Imaging-1.1.1.diff
-rw-r--r-- root/root     22671 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/pid.py
-rw-r--r-- root/root     18012 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/stringformat.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/sping/tests/
-rw-r--r-- root/root        26 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/tests/__init__.py
-rw-r--r-- root/root     15513 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/tests/pidtest.py
-rw-r--r-- root/root       431 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/tests/pstests.py
-rw-r--r-- root/root       967 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/tests/testallps.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/sping/util/
-rw-r--r-- root/root     13640 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/util/HTMLPiddler.py
-rw-r--r-- root/root        16 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/util/__init__.py
-rw-r--r-- root/root       390 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/sping/utils.py
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/lib/python3/dist-packages/rdkit/utils/
-rw-r--r-- root/root      2770 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/utils/12h.gif
-rw-r--r-- root/root         0 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/utils/__init__.py
-rw-r--r-- root/root      1740 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/utils/cactvs.py
-rw-r--r-- root/root     11800 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/utils/chemdraw.py
-rw-r--r-- root/root      2477 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/utils/chemdraw_qax.py
-rw-r--r-- root/root      4901 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/utils/chemutils.py
-rw-r--r-- root/root      2199 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/utils/comhack.py
-rw-r--r-- root/root      1003 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/utils/fileutils.py
-rw-r--r-- root/root      1189 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/utils/listutils.py
-rw-r--r-- root/root       113 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/utils/retest.txt
-rw-r--r-- root/root      1835 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/utils/spiral.py
-rw-r--r-- root/root     16086 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/utils/test1.gif
-rw-r--r-- root/root     11626 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/utils/test2.gif
-rw-r--r-- root/root      6682 2019-10-25 03:22 ./usr/lib/python3/dist-packages/rdkit/utils/test3.gif
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/share/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/share/doc/
drwxr-xr-x root/root         0 2020-05-12 10:21 ./usr/share/doc/python3-rdkit/
-rw-r--r-- root/root       225 2020-05-12 10:21 ./usr/share/doc/python3-rdkit/TODO.Debian
-rw-r--r-- root/root       221 2020-05-12 10:21 ./usr/share/doc/python3-rdkit/changelog.Debian.armhf.gz
-rw-r--r-- root/root      4625 2020-05-12 10:21 ./usr/share/doc/python3-rdkit/changelog.Debian.gz
-rw-r--r-- root/root     65510 2019-10-25 03:22 ./usr/share/doc/python3-rdkit/changelog.gz
-rw-r--r-- root/root      6705 2020-05-12 10:21 ./usr/share/doc/python3-rdkit/copyright


+------------------------------------------------------------------------------+
| Post Build                                                                   |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Cleanup                                                                      |
+------------------------------------------------------------------------------+

Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

+------------------------------------------------------------------------------+
| Summary                                                                      |
+------------------------------------------------------------------------------+

Build Architecture: armhf
Build-Space: 3618892
Build-Time: 4604
Distribution: bullseye-staging
Host Architecture: armhf
Install-Time: 1435
Job: rdkit_201909.1-4
Machine Architecture: armhf
Package: rdkit
Package-Time: 6079
Source-Version: 201909.1-4
Space: 3618892
Status: successful
Version: 201909.1-4+b1
--------------------------------------------------------------------------------
Finished at 2020-05-23T15:08:51Z
Build needed 01:41:19, 3618892k disk space
Raspbian Package Auto-Building

Build log for rdkit (201909.1-4+b1) on armhf
