Build log for rdkit (201909.1-3+b1) on armhf

rdkit → 201909.1-3+b1 → armhf → 2020-04-16 04:48:01

sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on bm-wb-04

+==============================================================================+
| rdkit 201909.1-3+b1 (armhf)                  Wed, 15 Apr 2020 23:09:17 +0000 |
+==============================================================================+

Package: rdkit
Version: 201909.1-3+b1
Source Version: 201909.1-3
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bullseye-staging-armhf-sbuild-4d6576b6-4674-4485-8136-0247c15e29b3' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [11.6 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [12.7 MB]
Fetched 24.4 MB in 25s (975 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'rdkit' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/debichem-team/rdkit.git
Please use:
git clone https://salsa.debian.org/debichem-team/rdkit.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 52.6 MB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main rdkit 201909.1-3 (dsc) [2810 B]
Get:2 http://172.17.0.1/private bullseye-staging/main rdkit 201909.1-3 (tar) [52.5 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main rdkit 201909.1-3 (diff) [99.6 kB]
Fetched 52.6 MB in 5s (11.5 MB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/rdkit-ayqJ8U/rdkit-201909.1' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/rdkit-ayqJ8U' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install build-essential                                                      |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-n4wHY0/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-n4wHY0/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-n4wHY0/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg:               imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg:              unchanged: 1
gpg:       secret keys read: 1
gpg:   secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-n4wHY0/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-n4wHY0/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-n4wHY0/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-n4wHY0/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-n4wHY0/apt_archive ./ Packages [431 B]
Fetched 2107 B in 1s (2686 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install core build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  libpam-cap netbase
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 3 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-n4wHY0/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (16.3 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12224 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any all)

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: bison, cmake, debhelper (>> 9), dh-python, doxygen, flex, imagemagick, latexmk, libboost-dev, libboost-iostreams-dev, libboost-python-dev, libboost-regex-dev, libboost-system-dev, libboost-thread-dev, libschroedinger-coordgenlibs-dev (>= 1.3-3), libmaeparser-dev, librsvg2-bin, libsqlite3-dev, pandoc, postgresql-server-dev-all, python3-dev, python3-numpy, python3-pandas, python3-pil | python3-imaging, python3-recommonmark, python3-sphinx, rapidjson-dev, texlive-fonts-recommended, texlive-latex-base, texlive-latex-extra, texlive-latex-recommended
Filtered Build-Depends: bison, cmake, debhelper (>> 9), dh-python, doxygen, flex, imagemagick, latexmk, libboost-dev, libboost-iostreams-dev, libboost-python-dev, libboost-regex-dev, libboost-system-dev, libboost-thread-dev, libschroedinger-coordgenlibs-dev (>= 1.3-3), libmaeparser-dev, librsvg2-bin, libsqlite3-dev, pandoc, postgresql-server-dev-all, python3-dev, python3-numpy, python3-pandas, python3-pil, python3-recommonmark, python3-sphinx, rapidjson-dev, texlive-fonts-recommended, texlive-latex-base, texlive-latex-extra, texlive-latex-recommended
dpkg-deb: building package 'sbuild-build-depends-rdkit-dummy' in '/<<BUILDDIR>>/resolver-n4wHY0/apt_archive/sbuild-build-depends-rdkit-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy sbuild-build-depends-rdkit-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-n4wHY0/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-n4wHY0/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-n4wHY0/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-n4wHY0/apt_archive ./ Sources [724 B]
Get:5 copy:/<<BUILDDIR>>/resolver-n4wHY0/apt_archive ./ Packages [794 B]
Fetched 2851 B in 1s (3632 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install rdkit build dependencies (apt-based resolver)
-----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following package was automatically installed and is no longer required:
  libpam-cap
Use 'apt autoremove' to remove it.
The following additional packages will be installed:
  autoconf automake autopoint autotools-dev binfmt-support bison bsdmainutils
  ca-certificates clang-10 cmake cmake-data debhelper dh-autoreconf dh-python
  dh-strip-nondeterminism docutils-common doxygen dwz file flex fontconfig
  fontconfig-config fonts-dejavu-core fonts-lmodern gettext gettext-base
  groff-base hicolor-icon-theme icu-devtools imagemagick imagemagick-6-common
  imagemagick-6.q16 intltool-debian latexmk libapache-pom-java
  libarchive-zip-perl libarchive13 libblas3 libboost-atomic1.67-dev
  libboost-atomic1.67.0 libboost-chrono1.67-dev libboost-chrono1.67.0
  libboost-date-time1.67-dev libboost-date-time1.67.0 libboost-dev
  libboost-iostreams-dev libboost-iostreams1.67-dev libboost-iostreams1.67.0
  libboost-python-dev libboost-python1.67-dev libboost-python1.67.0
  libboost-regex-dev libboost-regex1.67-dev libboost-regex1.67.0
  libboost-serialization1.67-dev libboost-serialization1.67.0
  libboost-system-dev libboost-system1.67-dev libboost-system1.67.0
  libboost-thread-dev libboost-thread1.67-dev libboost-thread1.67.0
  libboost1.67-dev libbrotli1 libbsd0 libcairo2 libclang-common-10-dev
  libclang-cpp10 libclang1-10 libclang1-9 libcommons-logging-java
  libcommons-parent-java libcroco3 libcurl4 libdatrie1 libde265-0
  libdebhelper-perl libedit2 libelf1 libexpat1 libexpat1-dev libffi-dev
  libfftw3-double3 libfile-stripnondeterminism-perl libfontbox-java
  libfontconfig1 libfreetype6 libfribidi0 libgc1c2 libgdk-pixbuf2.0-0
  libgdk-pixbuf2.0-common libgfortran5 libglib2.0-0 libgraphite2-3
  libgssapi-krb5-2 libharfbuzz-icu0 libharfbuzz0b libheif1 libice6 libicu-dev
  libicu63 libimagequant0 libjbig0 libjpeg62-turbo libjs-jquery
  libjs-sphinxdoc libjs-underscore libjsoncpp1 libk5crypto3 libkeyutils1
  libkpathsea6 libkrb5-3 libkrb5support0 liblapack3 liblcms2-2 libllvm10
  libllvm9 liblqr-1-0 libltdl7 libmaeparser-dev libmaeparser1 libmagic-mgc
  libmagic1 libmagickcore-6.q16-6 libmagickwand-6.q16-6 libmpdec2
  libncurses-dev libncurses6 libnghttp2-14 libobjc-9-dev libobjc4 libopenjp2-7
  libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
  libpaper1 libpdfbox-java libpfm4 libpipeline1 libpixman-1-0 libpng16-16
  libpq-dev libpq5 libprocps8 libpsl5 libptexenc1 libpython-dev
  libpython-stdlib libpython2-dev libpython2-stdlib libpython2.7
  libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-dev
  libpython3-stdlib libpython3.7-minimal libpython3.7-stdlib libpython3.8
  libpython3.8-dev libpython3.8-minimal libpython3.8-stdlib librhash0
  librsvg2-2 librsvg2-bin librtmp1 libschroedinger-coordgenlibs-dev
  libschroedinger-coordgenlibs1 libsigsegv2 libsm6 libsqlite3-dev libssh2-1
  libssl1.1 libsub-override-perl libsynctex2 libteckit0 libtexlua53
  libtexluajit2 libthai-data libthai0 libtiff5 libtinfo-dev libtinfo5 libtool
  libuchardet0 libuv1 libwebp6 libwebpdemux2 libwebpmux3 libx11-6 libx11-data
  libx265-179 libxapian30 libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1
  libxdmcp6 libxext6 libxi6 libxml2 libxmu6 libxpm4 libxrender1 libxt6
  libyaml-0-2 libz3-4 libz3-dev libzzip-0-13 llvm-10 llvm-10-dev
  llvm-10-runtime llvm-10-tools m4 man-db mime-support openssl pandoc
  pandoc-data po-debconf postgresql-client-12 postgresql-client-common
  postgresql-common postgresql-server-dev-12 postgresql-server-dev-all
  preview-latex-style procps python python-babel-localedata python-dev
  python-minimal python2 python2-dev python2-minimal python2.7 python2.7-dev
  python2.7-minimal python3 python3-alabaster python3-babel python3-certifi
  python3-chardet python3-commonmark-bkrs python3-dateutil python3-dev
  python3-distutils python3-docutils python3-idna python3-imagesize
  python3-jinja2 python3-lib2to3 python3-markupsafe python3-minimal
  python3-numpy python3-packaging python3-pandas python3-pandas-lib
  python3-pil python3-pkg-resources python3-pygments python3-pyparsing
  python3-recommonmark python3-requests python3-roman python3-six
  python3-sphinx python3-tz python3-urllib3 python3-yaml python3.7
  python3.7-minimal python3.8 python3.8-dev python3.8-minimal rapidjson-dev
  sensible-utils sgml-base shared-mime-info sphinx-common ssl-cert t1utils
  tex-common texlive-base texlive-binaries texlive-fonts-recommended
  texlive-latex-base texlive-latex-extra texlive-latex-recommended
  texlive-pictures ucf x11-common xdg-utils xml-core zlib1g-dev
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc bison-doc wamerican | wordlist
  whois vacation clang-10-doc cmake-doc ninja-build dh-make doxygen-latex
  doxygen-doc doxygen-gui graphviz flex-doc gettext-doc libasprintf-dev
  libgettextpo-dev groff imagemagick-doc autotrace cups-bsd | lpr | lprng curl
  enscript ffmpeg gimp gnuplot grads hp2xx html2ps libwmf-bin mplayer povray
  radiance sane-utils transfig ufraw-batch ghostscript lrzip libboost-doc
  libboost1.67-doc gccxml libboost-container1.67-dev libboost-context1.67-dev
  libboost-contract1.67-dev libboost-coroutine1.67-dev
  libboost-exception1.67-dev libboost-fiber1.67-dev
  libboost-filesystem1.67-dev libboost-graph1.67-dev
  libboost-graph-parallel1.67-dev libboost-locale1.67-dev libboost-log1.67-dev
  libboost-math1.67-dev libboost-mpi1.67-dev libboost-mpi-python1.67-dev
  libboost-numpy1.67-dev libboost-program-options1.67-dev
  libboost-random1.67-dev libboost-signals1.67-dev libboost-stacktrace1.67-dev
  libboost-test1.67-dev libboost-timer1.67-dev libboost-type-erasure1.67-dev
  libboost-wave1.67-dev libboost1.67-tools-dev libmpfrc++-dev libntl-dev
  libavalon-framework-java libcommons-logging-java-doc
  libexcalibur-logkit-java liblog4j1.2-java libfftw3-bin libfftw3-dev krb5-doc
  krb5-user icu-doc liblcms2-utils libmagickcore-6.q16-6-extra ncurses-doc
  postgresql-doc-12 sqlite3-doc libtool-doc gfortran | fortran95-compiler
  gcj-jdk xapian-tools llvm-10-doc m4-doc apparmor less www-browser
  texlive-xetex texlive-luatex pandoc-citeproc context wkhtmltopdf ghc nodejs
  php ruby r-base-core libjs-mathjax node-katex libmail-box-perl postgresql-12
  libjson-perl python-doc python-tk python2-doc python2.7-doc python3-doc
  python3-tk python3-venv python-commonmark-bkrs-doc docutils-doc
  fonts-linuxlibertine | ttf-linux-libertine texlive-lang-french
  python-jinja2-doc gfortran python-numpy-doc python3-pytest python3-numpy-dbg
  python-pandas-doc python3-statsmodels python-pil-doc python3-pil-dbg
  python3-setuptools python-pygments-doc ttf-bitstream-vera
  python-pyparsing-doc python3-cryptography python3-openssl python3-socks
  python-requests-doc dvipng python3-sphinx-rtd-theme python3-stemmer
  sphinx-doc texlive-plain-generic python3.7-venv python3.7-doc python3.8-venv
  python3.8-doc sgml-base-doc openssl-blacklist gv | postscript-viewer perl-tk
  xpdf | pdf-viewer xzdec texlive-fonts-recommended-doc texlive-latex-base-doc
  icc-profiles libfile-which-perl libspreadsheet-parseexcel-perl
  texlive-latex-extra-doc texlive-latex-recommended-doc texlive-pstricks
  dot2tex prerex ruby-tcltk | libtcltk-ruby texlive-pictures-doc vprerex
Recommended packages:
  libomp-10-dev libfl-dev curl | wget | lynx libmagickcore-6.q16-6-extra
  ghostscript netpbm xpdf | pdf-viewer gv | postscript-viewer
  libarchive-cpio-perl libgdk-pixbuf2.0-bin libglib2.0-data xdg-user-dirs
  javascript-common krb5-locales gsfonts libgpm2 publicsuffix librsvg2-common
  libltdl-dev libmail-sendmail-perl logrotate psmisc python3-scipy
  python3-matplotlib python3-numexpr python3-tables python3-xlrd
  python3-openpyxl python3-xlwt python3-bs4 python3-html5lib python3-lxml
  python3-olefile lmodern dvisvgm tex-gyre tipa texlive-plain-generic ruby
  | ruby-interpreter tk libfile-mimeinfo-perl libnet-dbus-perl
  libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
  autoconf automake autopoint autotools-dev binfmt-support bison bsdmainutils
  ca-certificates clang-10 cmake cmake-data debhelper dh-autoreconf dh-python
  dh-strip-nondeterminism docutils-common doxygen dwz file flex fontconfig
  fontconfig-config fonts-dejavu-core fonts-lmodern gettext gettext-base
  groff-base hicolor-icon-theme icu-devtools imagemagick imagemagick-6-common
  imagemagick-6.q16 intltool-debian latexmk libapache-pom-java
  libarchive-zip-perl libarchive13 libblas3 libboost-atomic1.67-dev
  libboost-atomic1.67.0 libboost-chrono1.67-dev libboost-chrono1.67.0
  libboost-date-time1.67-dev libboost-date-time1.67.0 libboost-dev
  libboost-iostreams-dev libboost-iostreams1.67-dev libboost-iostreams1.67.0
  libboost-python-dev libboost-python1.67-dev libboost-python1.67.0
  libboost-regex-dev libboost-regex1.67-dev libboost-regex1.67.0
  libboost-serialization1.67-dev libboost-serialization1.67.0
  libboost-system-dev libboost-system1.67-dev libboost-system1.67.0
  libboost-thread-dev libboost-thread1.67-dev libboost-thread1.67.0
  libboost1.67-dev libbrotli1 libbsd0 libcairo2 libclang-common-10-dev
  libclang-cpp10 libclang1-10 libclang1-9 libcommons-logging-java
  libcommons-parent-java libcroco3 libcurl4 libdatrie1 libde265-0
  libdebhelper-perl libedit2 libelf1 libexpat1 libexpat1-dev libffi-dev
  libfftw3-double3 libfile-stripnondeterminism-perl libfontbox-java
  libfontconfig1 libfreetype6 libfribidi0 libgc1c2 libgdk-pixbuf2.0-0
  libgdk-pixbuf2.0-common libgfortran5 libglib2.0-0 libgraphite2-3
  libgssapi-krb5-2 libharfbuzz-icu0 libharfbuzz0b libheif1 libice6 libicu-dev
  libicu63 libimagequant0 libjbig0 libjpeg62-turbo libjs-jquery
  libjs-sphinxdoc libjs-underscore libjsoncpp1 libk5crypto3 libkeyutils1
  libkpathsea6 libkrb5-3 libkrb5support0 liblapack3 liblcms2-2 libllvm10
  libllvm9 liblqr-1-0 libltdl7 libmaeparser-dev libmaeparser1 libmagic-mgc
  libmagic1 libmagickcore-6.q16-6 libmagickwand-6.q16-6 libmpdec2
  libncurses-dev libncurses6 libnghttp2-14 libobjc-9-dev libobjc4 libopenjp2-7
  libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
  libpaper1 libpdfbox-java libpfm4 libpipeline1 libpixman-1-0 libpng16-16
  libpq-dev libpq5 libprocps8 libpsl5 libptexenc1 libpython-dev
  libpython-stdlib libpython2-dev libpython2-stdlib libpython2.7
  libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-dev
  libpython3-stdlib libpython3.7-minimal libpython3.7-stdlib libpython3.8
  libpython3.8-dev libpython3.8-minimal libpython3.8-stdlib librhash0
  librsvg2-2 librsvg2-bin librtmp1 libschroedinger-coordgenlibs-dev
  libschroedinger-coordgenlibs1 libsigsegv2 libsm6 libsqlite3-dev libssh2-1
  libssl1.1 libsub-override-perl libsynctex2 libteckit0 libtexlua53
  libtexluajit2 libthai-data libthai0 libtiff5 libtinfo-dev libtinfo5 libtool
  libuchardet0 libuv1 libwebp6 libwebpdemux2 libwebpmux3 libx11-6 libx11-data
  libx265-179 libxapian30 libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1
  libxdmcp6 libxext6 libxi6 libxml2 libxmu6 libxpm4 libxrender1 libxt6
  libyaml-0-2 libz3-4 libz3-dev libzzip-0-13 llvm-10 llvm-10-dev
  llvm-10-runtime llvm-10-tools m4 man-db mime-support openssl pandoc
  pandoc-data po-debconf postgresql-client-12 postgresql-client-common
  postgresql-common postgresql-server-dev-12 postgresql-server-dev-all
  preview-latex-style procps python python-babel-localedata python-dev
  python-minimal python2 python2-dev python2-minimal python2.7 python2.7-dev
  python2.7-minimal python3 python3-alabaster python3-babel python3-certifi
  python3-chardet python3-commonmark-bkrs python3-dateutil python3-dev
  python3-distutils python3-docutils python3-idna python3-imagesize
  python3-jinja2 python3-lib2to3 python3-markupsafe python3-minimal
  python3-numpy python3-packaging python3-pandas python3-pandas-lib
  python3-pil python3-pkg-resources python3-pygments python3-pyparsing
  python3-recommonmark python3-requests python3-roman python3-six
  python3-sphinx python3-tz python3-urllib3 python3-yaml python3.7
  python3.7-minimal python3.8 python3.8-dev python3.8-minimal rapidjson-dev
  sbuild-build-depends-rdkit-dummy sensible-utils sgml-base shared-mime-info
  sphinx-common ssl-cert t1utils tex-common texlive-base texlive-binaries
  texlive-fonts-recommended texlive-latex-base texlive-latex-extra
  texlive-latex-recommended texlive-pictures ucf x11-common xdg-utils xml-core
  zlib1g-dev
0 upgraded, 297 newly installed, 0 to remove and 3 not upgraded.
Need to get 353 MB of archives.
After this operation, 1590 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-n4wHY0/apt_archive ./ sbuild-build-depends-rdkit-dummy 0.invalid.0 [1080 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf libbsd0 armhf 0.10.0-1 [112 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf libtinfo5 armhf 6.2-1 [318 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-4 [783 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.2-2 [29.6 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.1-1 [1262 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-4 [185 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf flex armhf 2.6.4-6.2 [427 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf libfftw3-double3 armhf 3.3.8-2 [429 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf libexpat1 armhf 2.2.9-1 [71.5 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf libpng16-16 armhf 1.6.37-2 [274 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf libfreetype6 armhf 2.10.1-2 [330 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf sensible-utils all 0.0.12+nmu1 [16.0 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf ucf all 3.0038+nmu1 [69.0 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf fonts-dejavu-core all 2.37-1 [1068 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf fontconfig-config all 2.13.1-2 [280 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf libfontconfig1 armhf 2.13.1-2 [327 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf libde265-0 armhf 1.0.4-1+rpi1 [183 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf libx265-179 armhf 3.2.1-1 [539 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf libheif1 armhf 1.6.1-1 [138 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf libjbig0 armhf 2.1-3.1+b2 [27.6 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo armhf 1:1.5.2-2+b1 [110 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf liblcms2-2 armhf 2.9-4 [119 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.64.1-1 [1157 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf liblqr-1-0 armhf 0.4.2-2.1 [23.1 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf libltdl7 armhf 2.4.6-14 [388 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf libopenjp2-7 armhf 2.3.1-1 [140 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf libwebp6 armhf 0.6.1-2 [228 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf libtiff5 armhf 4.1.0+git191117-2 [250 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf libwebpmux3 armhf 0.6.1-2 [94.2 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB]
Get:35 http://172.17.0.1/private bullseye-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:36 http://172.17.0.1/private bullseye-staging/main armhf libxcb1 armhf 1.14-2 [135 kB]
Get:37 http://172.17.0.1/private bullseye-staging/main armhf libx11-data all 2:1.6.9-2 [298 kB]
Get:38 http://172.17.0.1/private bullseye-staging/main armhf libx11-6 armhf 2:1.6.9-2 [692 kB]
Get:39 http://172.17.0.1/private bullseye-staging/main armhf libxext6 armhf 2:1.3.3-1+b2 [47.8 kB]
Get:40 http://172.17.0.1/private bullseye-staging/main armhf libicu63 armhf 63.2-3 [7987 kB]
Get:41 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.10+dfsg-4 [592 kB]
Get:42 http://172.17.0.1/private bullseye-staging/main armhf imagemagick-6-common all 8:6.9.10.23+dfsg-2.1 [200 kB]
Get:43 http://172.17.0.1/private bullseye-staging/main armhf libmagickcore-6.q16-6 armhf 8:6.9.10.23+dfsg-2.1+b2 [1616 kB]
Get:44 http://172.17.0.1/private bullseye-staging/main armhf libmagickwand-6.q16-6 armhf 8:6.9.10.23+dfsg-2.1+b2 [424 kB]
Get:45 http://172.17.0.1/private bullseye-staging/main armhf libpython2.7-minimal armhf 2.7.18~rc1-2 [395 kB]
Get:46 http://172.17.0.1/private bullseye-staging/main armhf python2.7-minimal armhf 2.7.18~rc1-2 [1106 kB]
Get:47 http://172.17.0.1/private bullseye-staging/main armhf python2-minimal armhf 2.7.17-2 [41.4 kB]
Get:48 http://172.17.0.1/private bullseye-staging/main armhf python-minimal armhf 2.7.17-2 [21.1 kB]
Get:49 http://172.17.0.1/private bullseye-staging/main armhf libssl1.1 armhf 1.1.1f-1 [1272 kB]
Get:50 http://172.17.0.1/private bullseye-staging/main armhf mime-support all 3.64 [37.8 kB]
Get:51 http://172.17.0.1/private bullseye-staging/main armhf libpython2.7-stdlib armhf 2.7.18~rc1-2 [1822 kB]
Get:52 http://172.17.0.1/private bullseye-staging/main armhf python2.7 armhf 2.7.18~rc1-2 [309 kB]
Get:53 http://172.17.0.1/private bullseye-staging/main armhf libpython2-stdlib armhf 2.7.17-2 [20.9 kB]
Get:54 http://172.17.0.1/private bullseye-staging/main armhf libpython-stdlib armhf 2.7.17-2 [20.9 kB]
Get:55 http://172.17.0.1/private bullseye-staging/main armhf python2 armhf 2.7.17-2 [41.7 kB]
Get:56 http://172.17.0.1/private bullseye-staging/main armhf python armhf 2.7.17-2 [22.9 kB]
Get:57 http://172.17.0.1/private bullseye-staging/main armhf libpython3.8-minimal armhf 3.8.2-1 [744 kB]
Get:58 http://172.17.0.1/private bullseye-staging/main armhf python3.8-minimal armhf 3.8.2-1 [1628 kB]
Get:59 http://172.17.0.1/private bullseye-staging/main armhf python3-minimal armhf 3.8.2-3 [37.6 kB]
Get:60 http://172.17.0.1/private bullseye-staging/main armhf libmpdec2 armhf 2.4.2-3 [68.1 kB]
Get:61 http://172.17.0.1/private bullseye-staging/main armhf libpython3.8-stdlib armhf 3.8.2-1 [1597 kB]
Get:62 http://172.17.0.1/private bullseye-staging/main armhf python3.8 armhf 3.8.2-1 [410 kB]
Get:63 http://172.17.0.1/private bullseye-staging/main armhf libpython3-stdlib armhf 3.8.2-3 [20.8 kB]
Get:64 http://172.17.0.1/private bullseye-staging/main armhf python3 armhf 3.8.2-3 [63.7 kB]
Get:65 http://172.17.0.1/private bullseye-staging/main armhf libpython3.7-minimal armhf 3.7.7-1 [585 kB]
Get:66 http://172.17.0.1/private bullseye-staging/main armhf python3.7-minimal armhf 3.7.7-1 [1532 kB]
Get:67 http://172.17.0.1/private bullseye-staging/main armhf sgml-base all 1.30 [15.1 kB]
Get:68 http://172.17.0.1/private bullseye-staging/main armhf tex-common all 6.13 [53.2 kB]
Get:69 http://172.17.0.1/private bullseye-staging/main armhf libncurses6 armhf 6.2-1 [79.5 kB]
Get:70 http://172.17.0.1/private bullseye-staging/main armhf libprocps8 armhf 2:3.3.16-4 [59.8 kB]
Get:71 http://172.17.0.1/private bullseye-staging/main armhf procps armhf 2:3.3.16-4 [238 kB]
Get:72 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.38-4 [262 kB]
Get:73 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.38-4 [112 kB]
Get:74 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.38-4 [66.9 kB]
Get:75 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-10 [117 kB]
Get:76 http://172.17.0.1/private bullseye-staging/main armhf libgc1c2 armhf 1:7.6.4-0.4 [212 kB]
Get:77 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-11.1 [341 kB]
Get:78 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:79 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.2-1 [775 kB]
Get:80 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.19.8.1-10 [435 kB]
Get:81 http://172.17.0.1/private bullseye-staging/main armhf binfmt-support armhf 2.2.0-2 [56.7 kB]
Get:82 http://172.17.0.1/private bullseye-staging/main armhf bison armhf 2:3.5.3+dfsg-1 [923 kB]
Get:83 http://172.17.0.1/private bullseye-staging/main armhf openssl armhf 1.1.1f-1 [811 kB]
Get:84 http://172.17.0.1/private bullseye-staging/main armhf ca-certificates all 20190110 [157 kB]
Get:85 http://172.17.0.1/private bullseye-staging/main armhf libedit2 armhf 3.1-20191231-1 [79.2 kB]
Get:86 http://172.17.0.1/private bullseye-staging/main armhf libz3-4 armhf 4.8.7-4 [5477 kB]
Get:87 http://172.17.0.1/private bullseye-staging/main armhf libllvm10 armhf 1:10.0.0-1+rpi1 [13.7 MB]
Get:88 http://172.17.0.1/private bullseye-staging/main armhf libclang-cpp10 armhf 1:10.0.0-1+rpi1 [8577 kB]
Get:89 http://172.17.0.1/private bullseye-staging/main armhf libobjc4 armhf 10-20200324-1+rpi1 [33.9 kB]
Get:90 http://172.17.0.1/private bullseye-staging/main armhf libobjc-9-dev armhf 9.3.0-10+rpi1 [198 kB]
Get:91 http://172.17.0.1/private bullseye-staging/main armhf libclang-common-10-dev armhf 1:10.0.0-1+rpi1 [1334 kB]
Get:92 http://172.17.0.1/private bullseye-staging/main armhf libclang1-10 armhf 1:10.0.0-1+rpi1 [6401 kB]
Get:93 http://172.17.0.1/private bullseye-staging/main armhf clang-10 armhf 1:10.0.0-1+rpi1 [98.5 kB]
Get:94 http://172.17.0.1/private bullseye-staging/main armhf cmake-data all 3.16.3-1 [1628 kB]
Get:95 http://172.17.0.1/private bullseye-staging/main armhf libarchive13 armhf 3.4.0-2 [292 kB]
Get:96 http://172.17.0.1/private bullseye-staging/main armhf libbrotli1 armhf 1.0.7-6 [261 kB]
Get:97 http://172.17.0.1/private bullseye-staging/main armhf libkrb5support0 armhf 1.17-7 [61.4 kB]
Get:98 http://172.17.0.1/private bullseye-staging/main armhf libk5crypto3 armhf 1.17-7 [112 kB]
Get:99 http://172.17.0.1/private bullseye-staging/main armhf libkeyutils1 armhf 1.6.1-2 [14.5 kB]
Get:100 http://172.17.0.1/private bullseye-staging/main armhf libkrb5-3 armhf 1.17-7 [320 kB]
Get:101 http://172.17.0.1/private bullseye-staging/main armhf libgssapi-krb5-2 armhf 1.17-7 [135 kB]
Get:102 http://172.17.0.1/private bullseye-staging/main armhf libnghttp2-14 armhf 1.40.0-1+b2 [74.2 kB]
Get:103 http://172.17.0.1/private bullseye-staging/main armhf libpsl5 armhf 0.21.0-1 [53.9 kB]
Get:104 http://172.17.0.1/private bullseye-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b1 [54.3 kB]
Get:105 http://172.17.0.1/private bullseye-staging/main armhf libssh2-1 armhf 1.8.0-2.1 [126 kB]
Get:106 http://172.17.0.1/private bullseye-staging/main armhf libcurl4 armhf 7.68.0-1 [286 kB]
Get:107 http://172.17.0.1/private bullseye-staging/main armhf libjsoncpp1 armhf 1.7.4-3.1 [65.8 kB]
Get:108 http://172.17.0.1/private bullseye-staging/main armhf librhash0 armhf 1.3.9-1 [133 kB]
Get:109 http://172.17.0.1/private bullseye-staging/main armhf libuv1 armhf 1.34.2-1 [114 kB]
Get:110 http://172.17.0.1/private bullseye-staging/main armhf cmake armhf 3.16.3-1 [2648 kB]
Get:111 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-14 [513 kB]
Get:112 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:113 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 12.10 [184 kB]
Get:114 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:115 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:116 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.7.0-1 [23.8 kB]
Get:117 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.7.0-1 [14.8 kB]
Get:118 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.176-1.1 [158 kB]
Get:119 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13-5 [142 kB]
Get:120 http://172.17.0.1/private bullseye-staging/main armhf libcroco3 armhf 0.6.13-1 [133 kB]
Get:121 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.19.8.1-10 [1219 kB]
Get:122 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:123 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:124 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 12.10 [1003 kB]
Get:125 http://172.17.0.1/private bullseye-staging/main armhf python3-lib2to3 all 3.8.2-2 [78.4 kB]
Get:126 http://172.17.0.1/private bullseye-staging/main armhf python3-distutils all 3.8.2-2 [145 kB]
Get:127 http://172.17.0.1/private bullseye-staging/main armhf dh-python all 4.20200315 [91.6 kB]
Get:128 http://172.17.0.1/private bullseye-staging/main armhf xml-core all 0.18+nmu1 [23.8 kB]
Get:129 http://172.17.0.1/private bullseye-staging/main armhf docutils-common all 0.16+dfsg-2 [129 kB]
Get:130 http://172.17.0.1/private bullseye-staging/main armhf libllvm9 armhf 1:9.0.1-11+rpi1 [13.1 MB]
Get:131 http://172.17.0.1/private bullseye-staging/main armhf libclang1-9 armhf 1:9.0.1-11+rpi1 [5584 kB]
Get:132 http://172.17.0.1/private bullseye-staging/main armhf libxapian30 armhf 1.4.15-1 [951 kB]
Get:133 http://172.17.0.1/private bullseye-staging/main armhf doxygen armhf 1.8.16-2 [7624 kB]
Get:134 http://172.17.0.1/private bullseye-staging/main armhf fontconfig armhf 2.13.1-2 [404 kB]
Get:135 http://172.17.0.1/private bullseye-staging/main armhf fonts-lmodern all 2.004.5-6 [4539 kB]
Get:136 http://172.17.0.1/private bullseye-staging/main armhf hicolor-icon-theme all 0.17-2 [11.4 kB]
Get:137 http://172.17.0.1/private bullseye-staging/main armhf icu-devtools armhf 63.2-3 [163 kB]
Get:138 http://172.17.0.1/private bullseye-staging/main armhf imagemagick-6.q16 armhf 8:6.9.10.23+dfsg-2.1+b2 [580 kB]
Get:139 http://172.17.0.1/private bullseye-staging/main armhf imagemagick armhf 8:6.9.10.23+dfsg-2.1+b2 [156 kB]
Get:140 http://172.17.0.1/private bullseye-staging/main armhf libpaper1 armhf 1.1.28 [20.5 kB]
Get:141 http://172.17.0.1/private bullseye-staging/main armhf libpaper-utils armhf 1.1.28 [17.7 kB]
Get:142 http://172.17.0.1/private bullseye-staging/main armhf libkpathsea6 armhf 2019.20190605.51237-3 [159 kB]
Get:143 http://172.17.0.1/private bullseye-staging/main armhf libptexenc1 armhf 2019.20190605.51237-3 [60.0 kB]
Get:144 http://172.17.0.1/private bullseye-staging/main armhf libsynctex2 armhf 2019.20190605.51237-3 [68.8 kB]
Get:145 http://172.17.0.1/private bullseye-staging/main armhf libtexlua53 armhf 2019.20190605.51237-3 [99.7 kB]
Get:146 http://172.17.0.1/private bullseye-staging/main armhf libtexluajit2 armhf 2019.20190605.51237-3 [206 kB]
Get:147 http://172.17.0.1/private bullseye-staging/main armhf t1utils armhf 1.41-3 [52.1 kB]
Get:148 http://172.17.0.1/private bullseye-staging/main armhf libpixman-1-0 armhf 0.36.0-1 [458 kB]
Get:149 http://172.17.0.1/private bullseye-staging/main armhf libxcb-render0 armhf 1.14-2 [110 kB]
Get:150 http://172.17.0.1/private bullseye-staging/main armhf libxcb-shm0 armhf 1.14-2 [101 kB]
Get:151 http://172.17.0.1/private bullseye-staging/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB]
Get:152 http://172.17.0.1/private bullseye-staging/main armhf libcairo2 armhf 1.16.0-4 [599 kB]
Get:153 http://172.17.0.1/private bullseye-staging/main armhf libgraphite2-3 armhf 1.3.14-1 [70.3 kB]
Get:154 http://172.17.0.1/private bullseye-staging/main armhf libharfbuzz0b armhf 2.6.4-1+rpi1 [1308 kB]
Get:155 http://172.17.0.1/private bullseye-staging/main armhf libharfbuzz-icu0 armhf 2.6.4-1+rpi1 [976 kB]
Get:156 http://172.17.0.1/private bullseye-staging/main armhf libteckit0 armhf 2.5.8+ds2-5 [245 kB]
Get:157 http://172.17.0.1/private bullseye-staging/main armhf x11-common all 1:7.7+20 [252 kB]
Get:158 http://172.17.0.1/private bullseye-staging/main armhf libice6 armhf 2:1.0.9-2 [51.6 kB]
Get:159 http://172.17.0.1/private bullseye-staging/main armhf libsm6 armhf 2:1.2.3-1 [32.9 kB]
Get:160 http://172.17.0.1/private bullseye-staging/main armhf libxt6 armhf 1:1.1.5-1+b3 [156 kB]
Get:161 http://172.17.0.1/private bullseye-staging/main armhf libxmu6 armhf 2:1.1.2-2+b3 [52.1 kB]
Get:162 http://172.17.0.1/private bullseye-staging/main armhf libxpm4 armhf 1:3.5.12-1 [43.6 kB]
Get:163 http://172.17.0.1/private bullseye-staging/main armhf libxaw7 armhf 2:1.0.13-1+b2 [163 kB]
Get:164 http://172.17.0.1/private bullseye-staging/main armhf libxi6 armhf 2:1.7.9-1 [77.8 kB]
Get:165 http://172.17.0.1/private bullseye-staging/main armhf libzzip-0-13 armhf 0.13.62-3.2 [51.6 kB]
Get:166 http://172.17.0.1/private bullseye-staging/main armhf texlive-binaries armhf 2019.20190605.51237-3 [5748 kB]
Get:167 http://172.17.0.1/private bullseye-staging/main armhf xdg-utils all 1.1.3-2 [74.6 kB]
Get:168 http://172.17.0.1/private bullseye-staging/main armhf texlive-base all 2019.20200302-1 [21.0 MB]
Get:169 http://172.17.0.1/private bullseye-staging/main armhf texlive-latex-base all 2019.20200302-1 [1051 kB]
Get:170 http://172.17.0.1/private bullseye-staging/main armhf latexmk all 1:4.69-0.1 [391 kB]
Get:171 http://172.17.0.1/private bullseye-staging/main armhf libapache-pom-java all 18-1 [4676 B]
Get:172 http://172.17.0.1/private bullseye-staging/main armhf libblas3 armhf 3.9.0-2 [108 kB]
Get:173 http://172.17.0.1/private bullseye-staging/main armhf libboost1.67-dev armhf 1.67.0-17 [8389 kB]
Get:174 http://172.17.0.1/private bullseye-staging/main armhf libboost-atomic1.67.0 armhf 1.67.0-17 [227 kB]
Get:175 http://172.17.0.1/private bullseye-staging/main armhf libboost-atomic1.67-dev armhf 1.67.0-17 [225 kB]
Get:176 http://172.17.0.1/private bullseye-staging/main armhf libboost-system1.67.0 armhf 1.67.0-17 [229 kB]
Get:177 http://172.17.0.1/private bullseye-staging/main armhf libboost-chrono1.67.0 armhf 1.67.0-17 [232 kB]
Get:178 http://172.17.0.1/private bullseye-staging/main armhf libboost-chrono1.67-dev armhf 1.67.0-17 [234 kB]
Get:179 http://172.17.0.1/private bullseye-staging/main armhf libboost-date-time1.67.0 armhf 1.67.0-17 [237 kB]
Get:180 http://172.17.0.1/private bullseye-staging/main armhf libboost-serialization1.67.0 armhf 1.67.0-17 [301 kB]
Get:181 http://172.17.0.1/private bullseye-staging/main armhf libboost-serialization1.67-dev armhf 1.67.0-17 [369 kB]
Get:182 http://172.17.0.1/private bullseye-staging/main armhf libboost-date-time1.67-dev armhf 1.67.0-17 [249 kB]
Get:183 http://172.17.0.1/private bullseye-staging/main armhf libboost-dev armhf 1.67.0.2+b11 [4464 B]
Get:184 http://172.17.0.1/private bullseye-staging/main armhf libboost-regex1.67.0 armhf 1.67.0-17 [452 kB]
Get:185 http://172.17.0.1/private bullseye-staging/main armhf libicu-dev armhf 63.2-3 [8860 kB]
Get:186 http://172.17.0.1/private bullseye-staging/main armhf libboost-regex1.67-dev armhf 1.67.0-17 [555 kB]
Get:187 http://172.17.0.1/private bullseye-staging/main armhf libboost-iostreams1.67.0 armhf 1.67.0-17 [246 kB]
Get:188 http://172.17.0.1/private bullseye-staging/main armhf libboost-iostreams1.67-dev armhf 1.67.0-17 [254 kB]
Get:189 http://172.17.0.1/private bullseye-staging/main armhf libboost-iostreams-dev armhf 1.67.0.2+b11 [4236 B]
Get:190 http://172.17.0.1/private bullseye-staging/main armhf libboost-python1.67.0 armhf 1.67.0-17 [341 kB]
Get:191 http://172.17.0.1/private bullseye-staging/main armhf libpython2.7 armhf 2.7.18~rc1-2 [883 kB]
Get:192 http://172.17.0.1/private bullseye-staging/main armhf libexpat1-dev armhf 2.2.9-1 [119 kB]
Get:193 http://172.17.0.1/private bullseye-staging/main armhf libpython2.7-dev armhf 2.7.18~rc1-2 [2069 kB]
Get:194 http://172.17.0.1/private bullseye-staging/main armhf libpython2-dev armhf 2.7.17-2 [21.0 kB]
Get:195 http://172.17.0.1/private bullseye-staging/main armhf libpython-dev armhf 2.7.17-2 [21.0 kB]
Get:196 http://172.17.0.1/private bullseye-staging/main armhf python2.7-dev armhf 2.7.18~rc1-2 [292 kB]
Get:197 http://172.17.0.1/private bullseye-staging/main armhf python2-dev armhf 2.7.17-2 [1224 B]
Get:198 http://172.17.0.1/private bullseye-staging/main armhf python-dev armhf 2.7.17-2 [1196 B]
Get:199 http://172.17.0.1/private bullseye-staging/main armhf libpython3.8 armhf 3.8.2-1 [1367 kB]
Get:200 http://172.17.0.1/private bullseye-staging/main armhf libpython3.8-dev armhf 3.8.2-1 [46.0 MB]
Get:201 http://172.17.0.1/private bullseye-staging/main armhf libpython3-dev armhf 3.8.2-3 [21.0 kB]
Get:202 http://172.17.0.1/private bullseye-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [184 kB]
Get:203 http://172.17.0.1/private bullseye-staging/main armhf python3.8-dev armhf 3.8.2-1 [533 kB]
Get:204 http://172.17.0.1/private bullseye-staging/main armhf python3-dev armhf 3.8.2-3 [1164 B]
Get:205 http://172.17.0.1/private bullseye-staging/main armhf libboost-python1.67-dev armhf 1.67.0-17 [362 kB]
Get:206 http://172.17.0.1/private bullseye-staging/main armhf libboost-python-dev armhf 1.67.0.2+b11 [4548 B]
Get:207 http://172.17.0.1/private bullseye-staging/main armhf libboost-regex-dev armhf 1.67.0.2+b11 [4516 B]
Get:208 http://172.17.0.1/private bullseye-staging/main armhf libboost-system1.67-dev armhf 1.67.0-17 [231 kB]
Get:209 http://172.17.0.1/private bullseye-staging/main armhf libboost-system-dev armhf 1.67.0.2+b11 [4388 B]
Get:210 http://172.17.0.1/private bullseye-staging/main armhf libboost-thread1.67.0 armhf 1.67.0-17 [263 kB]
Get:211 http://172.17.0.1/private bullseye-staging/main armhf libboost-thread1.67-dev armhf 1.67.0-17 [272 kB]
Get:212 http://172.17.0.1/private bullseye-staging/main armhf libboost-thread-dev armhf 1.67.0.2+b11 [4280 B]
Get:213 http://172.17.0.1/private bullseye-staging/main armhf libcommons-parent-java all 43-1 [10.8 kB]
Get:214 http://172.17.0.1/private bullseye-staging/main armhf libcommons-logging-java all 1.2-2 [62.2 kB]
Get:215 http://172.17.0.1/private bullseye-staging/main armhf libdatrie1 armhf 0.2.12-3+b1 [36.4 kB]
Get:216 http://172.17.0.1/private bullseye-staging/main armhf libffi-dev armhf 3.3-4 [57.9 kB]
Get:217 http://172.17.0.1/private bullseye-staging/main armhf libfontbox-java all 1:1.8.16-2 [211 kB]
Get:218 http://172.17.0.1/private bullseye-staging/main armhf libfribidi0 armhf 1.0.8-2 [63.5 kB]
Get:219 http://172.17.0.1/private bullseye-staging/main armhf libgdk-pixbuf2.0-common all 2.40.0+dfsg-4 [317 kB]
Get:220 http://172.17.0.1/private bullseye-staging/main armhf shared-mime-info armhf 1.15-1 [785 kB]
Get:221 http://172.17.0.1/private bullseye-staging/main armhf libgdk-pixbuf2.0-0 armhf 2.40.0+dfsg-4 [158 kB]
Get:222 http://172.17.0.1/private bullseye-staging/main armhf libgfortran5 armhf 10-20200324-1+rpi1 [230 kB]
Get:223 http://172.17.0.1/private bullseye-staging/main armhf libimagequant0 armhf 2.12.2-1.1 [27.2 kB]
Get:224 http://172.17.0.1/private bullseye-staging/main armhf libjs-jquery all 3.3.1~dfsg-3 [332 kB]
Get:225 http://172.17.0.1/private bullseye-staging/main armhf libjs-underscore all 1.9.1~dfsg-1 [99.4 kB]
Get:226 http://172.17.0.1/private bullseye-staging/main armhf libjs-sphinxdoc all 1.8.5-8 [96.9 kB]
Get:227 http://172.17.0.1/private bullseye-staging/main armhf liblapack3 armhf 3.9.0-2 [1602 kB]
Get:228 http://172.17.0.1/private bullseye-staging/main armhf libmaeparser1 armhf 1.2.3-3 [72.7 kB]
Get:229 http://172.17.0.1/private bullseye-staging/main armhf libmaeparser-dev armhf 1.2.3-3 [13.0 kB]
Get:230 http://172.17.0.1/private bullseye-staging/main armhf libncurses-dev armhf 6.2-1 [284 kB]
Get:231 http://172.17.0.1/private bullseye-staging/main armhf libthai-data all 0.1.28-3 [170 kB]
Get:232 http://172.17.0.1/private bullseye-staging/main armhf libthai0 armhf 0.1.28-3 [51.0 kB]
Get:233 http://172.17.0.1/private bullseye-staging/main armhf libpango-1.0-0 armhf 1.44.7-3 [165 kB]
Get:234 http://172.17.0.1/private bullseye-staging/main armhf libpangoft2-1.0-0 armhf 1.44.7-3 [52.1 kB]
Get:235 http://172.17.0.1/private bullseye-staging/main armhf libpangocairo-1.0-0 armhf 1.44.7-3 [44.6 kB]
Get:236 http://172.17.0.1/private bullseye-staging/main armhf libpdfbox-java all 1:1.8.16-2 [5205 kB]
Get:237 http://172.17.0.1/private bullseye-staging/main armhf libpfm4 armhf 4.10.1+git44-ga2909cd-1 [37.0 kB]
Get:238 http://172.17.0.1/private bullseye-staging/main armhf libpq5 armhf 12.2-4 [154 kB]
Get:239 http://172.17.0.1/private bullseye-staging/main armhf libpq-dev armhf 12.2-4 [126 kB]
Get:240 http://172.17.0.1/private bullseye-staging/main armhf libpython3.7-stdlib armhf 3.7.7-1 [1670 kB]
Get:241 http://172.17.0.1/private bullseye-staging/main armhf librsvg2-2 armhf 2.48.2-1 [1155 kB]
Get:242 http://172.17.0.1/private bullseye-staging/main armhf librsvg2-bin armhf 2.48.2-1 [29.1 kB]
Get:243 http://172.17.0.1/private bullseye-staging/main armhf libschroedinger-coordgenlibs1 armhf 1.3-3 [149 kB]
Get:244 http://172.17.0.1/private bullseye-staging/main armhf libschroedinger-coordgenlibs-dev armhf 1.3-3 [29.7 kB]
Get:245 http://172.17.0.1/private bullseye-staging/main armhf libsqlite3-dev armhf 3.31.1-4 [711 kB]
Get:246 http://172.17.0.1/private bullseye-staging/main armhf libtinfo-dev armhf 6.2-1 [924 B]
Get:247 http://172.17.0.1/private bullseye-staging/main armhf libwebpdemux2 armhf 0.6.1-2 [86.7 kB]
Get:248 http://172.17.0.1/private bullseye-staging/main armhf libyaml-0-2 armhf 0.2.2-1 [40.0 kB]
Get:249 http://172.17.0.1/private bullseye-staging/main armhf libz3-dev armhf 4.8.7-4 [87.3 kB]
Get:250 http://172.17.0.1/private bullseye-staging/main armhf llvm-10-runtime armhf 1:10.0.0-1+rpi1 [194 kB]
Get:251 http://172.17.0.1/private bullseye-staging/main armhf llvm-10 armhf 1:10.0.0-1+rpi1 [4272 kB]
Get:252 http://172.17.0.1/private bullseye-staging/main armhf python3-pkg-resources all 44.0.0-1 [155 kB]
Get:253 http://172.17.0.1/private bullseye-staging/main armhf python3-pygments all 2.3.1+dfsg-2 [596 kB]
Get:254 http://172.17.0.1/private bullseye-staging/main armhf python3-yaml armhf 5.3.1-1 [185 kB]
Get:255 http://172.17.0.1/private bullseye-staging/main armhf llvm-10-tools armhf 1:10.0.0-1+rpi1 [314 kB]
Get:256 http://172.17.0.1/private bullseye-staging/main armhf llvm-10-dev armhf 1:10.0.0-1+rpi1 [25.8 MB]
Get:257 http://172.17.0.1/private bullseye-staging/main armhf pandoc-data all 2.5-3 [349 kB]
Get:258 http://172.17.0.1/private bullseye-staging/main armhf pandoc armhf 2.5-3+b1 [18.6 MB]
Get:259 http://172.17.0.1/private bullseye-staging/main armhf postgresql-client-common all 214 [87.2 kB]
Get:260 http://172.17.0.1/private bullseye-staging/main armhf postgresql-client-12 armhf 12.2-4 [1291 kB]
Get:261 http://172.17.0.1/private bullseye-staging/main armhf ssl-cert all 1.0.39 [20.8 kB]
Get:262 http://172.17.0.1/private bullseye-staging/main armhf postgresql-common all 214 [236 kB]
Get:263 http://172.17.0.1/private bullseye-staging/main armhf postgresql-server-dev-12 armhf 12.2-4 [924 kB]
Get:264 http://172.17.0.1/private bullseye-staging/main armhf postgresql-server-dev-all all 214 [68.8 kB]
Get:265 http://172.17.0.1/private bullseye-staging/main armhf preview-latex-style all 11.91-2 [201 kB]
Get:266 http://172.17.0.1/private bullseye-staging/main armhf python-babel-localedata all 2.8.0+dfsg.1-3 [4998 kB]
Get:267 http://172.17.0.1/private bullseye-staging/main armhf python3-alabaster all 0.7.8-1.1 [18.6 kB]
Get:268 http://172.17.0.1/private bullseye-staging/main armhf python3-tz all 2019.3-1 [27.2 kB]
Get:269 http://172.17.0.1/private bullseye-staging/main armhf python3-babel all 2.8.0+dfsg.1-3 [99.8 kB]
Get:270 http://172.17.0.1/private bullseye-staging/main armhf python3-certifi all 2019.11.28-2 [149 kB]
Get:271 http://172.17.0.1/private bullseye-staging/main armhf python3-chardet all 3.0.4-4 [80.8 kB]
Get:272 http://172.17.0.1/private bullseye-staging/main armhf python3-commonmark-bkrs all 0.5.4+ds-4 [29.5 kB]
Get:273 http://172.17.0.1/private bullseye-staging/main armhf python3-six all 1.14.0-2 [16.7 kB]
Get:274 http://172.17.0.1/private bullseye-staging/main armhf python3-dateutil all 2.7.3-3 [64.5 kB]
Get:275 http://172.17.0.1/private bullseye-staging/main armhf python3-roman all 2.0.0-4 [8972 B]
Get:276 http://172.17.0.1/private bullseye-staging/main armhf python3-docutils all 0.16+dfsg-2 [383 kB]
Get:277 http://172.17.0.1/private bullseye-staging/main armhf python3-idna all 2.8-2 [36.6 kB]
Get:278 http://172.17.0.1/private bullseye-staging/main armhf python3-imagesize all 1.2.0-2 [5824 B]
Get:279 http://172.17.0.1/private bullseye-staging/main armhf python3-markupsafe armhf 1.1.1-1 [15.0 kB]
Get:280 http://172.17.0.1/private bullseye-staging/main armhf python3-jinja2 all 2.10.1-2 [107 kB]
Get:281 http://172.17.0.1/private bullseye-staging/main armhf python3.7 armhf 3.7.7-1 [354 kB]
Get:282 http://172.17.0.1/private bullseye-staging/main armhf python3-numpy armhf 1:1.17.4-5+b1 [4484 kB]
Get:283 http://172.17.0.1/private bullseye-staging/main armhf python3-pyparsing all 2.4.6-1 [109 kB]
Get:284 http://172.17.0.1/private bullseye-staging/main armhf python3-packaging all 20.3-1 [29.7 kB]
Get:285 http://172.17.0.1/private bullseye-staging/main armhf python3-pandas-lib armhf 0.25.3+dfsg-9+rpi1 [7002 kB]
Get:286 http://172.17.0.1/private bullseye-staging/main armhf python3-pandas all 0.25.3+dfsg-9+rpi1 [1984 kB]
Get:287 http://172.17.0.1/private bullseye-staging/main armhf python3-pil armhf 6.2.1-2+b1 [396 kB]
Get:288 http://172.17.0.1/private bullseye-staging/main armhf python3-recommonmark all 0.4.0+ds-6 [15.0 kB]
Get:289 http://172.17.0.1/private bullseye-staging/main armhf python3-urllib3 all 1.25.8-2 [104 kB]
Get:290 http://172.17.0.1/private bullseye-staging/main armhf python3-requests all 2.23.0+dfsg-2 [71.4 kB]
Get:291 http://172.17.0.1/private bullseye-staging/main armhf sphinx-common all 1.8.5-8 [447 kB]
Get:292 http://172.17.0.1/private bullseye-staging/main armhf python3-sphinx all 1.8.5-8 [482 kB]
Get:293 http://172.17.0.1/private bullseye-staging/main armhf rapidjson-dev all 1.1.0+dfsg2-5 [98.7 kB]
Get:294 http://172.17.0.1/private bullseye-staging/main armhf texlive-fonts-recommended all 2019.20200302-1 [5001 kB]
Get:295 http://172.17.0.1/private bullseye-staging/main armhf texlive-latex-recommended all 2019.20200302-1 [15.7 MB]
Get:296 http://172.17.0.1/private bullseye-staging/main armhf texlive-pictures all 2019.20200302-1 [4526 kB]
Get:297 http://172.17.0.1/private bullseye-staging/main armhf texlive-latex-extra all 2019.202000302-1 [12.9 MB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 353 MB in 29s (12.3 MB/s)
Selecting previously unselected package libbsd0:armhf.
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Preparing to unpack .../00-libbsd0_0.10.0-1_armhf.deb ...
Unpacking libbsd0:armhf (0.10.0-1) ...
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Unpacking libtinfo5:armhf (6.2-1) ...
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Preparing to unpack .../02-bsdmainutils_11.1.2_armhf.deb ...
Unpacking bsdmainutils (11.1.2) ...
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Preparing to unpack .../03-libuchardet0_0.0.6-3_armhf.deb ...
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Selecting previously unselected package groff-base.
Preparing to unpack .../04-groff-base_1.22.4-4_armhf.deb ...
Unpacking groff-base (1.22.4-4) ...
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Unpacking libpipeline1:armhf (1.5.2-2) ...
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Unpacking man-db (2.9.1-1) ...
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Unpacking libsigsegv2:armhf (2.12-2) ...
Selecting previously unselected package m4.
Preparing to unpack .../08-m4_1.4.18-4_armhf.deb ...
Unpacking m4 (1.4.18-4) ...
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Unpacking flex (2.6.4-6.2) ...
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Unpacking libfftw3-double3:armhf (3.3.8-2) ...
Selecting previously unselected package libexpat1:armhf.
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Unpacking libexpat1:armhf (2.2.9-1) ...
Selecting previously unselected package libpng16-16:armhf.
Preparing to unpack .../12-libpng16-16_1.6.37-2_armhf.deb ...
Unpacking libpng16-16:armhf (1.6.37-2) ...
Selecting previously unselected package libfreetype6:armhf.
Preparing to unpack .../13-libfreetype6_2.10.1-2_armhf.deb ...
Unpacking libfreetype6:armhf (2.10.1-2) ...
Selecting previously unselected package sensible-utils.
Preparing to unpack .../14-sensible-utils_0.0.12+nmu1_all.deb ...
Unpacking sensible-utils (0.0.12+nmu1) ...
Selecting previously unselected package ucf.
Preparing to unpack .../15-ucf_3.0038+nmu1_all.deb ...
Moving old data out of the way
Unpacking ucf (3.0038+nmu1) ...
Selecting previously unselected package fonts-dejavu-core.
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Unpacking fonts-dejavu-core (2.37-1) ...
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Preparing to unpack .../17-fontconfig-config_2.13.1-2_all.deb ...
Unpacking fontconfig-config (2.13.1-2) ...
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Unpacking libfontconfig1:armhf (2.13.1-2) ...
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Preparing to unpack .../19-libde265-0_1.0.4-1+rpi1_armhf.deb ...
Unpacking libde265-0:armhf (1.0.4-1+rpi1) ...
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Unpacking libx265-179:armhf (3.2.1-1) ...
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Selecting previously unselected package libjpeg62-turbo:armhf.
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Unpacking libjpeg62-turbo:armhf (1:1.5.2-2+b1) ...
Selecting previously unselected package liblcms2-2:armhf.
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Unpacking liblcms2-2:armhf (2.9-4) ...
Selecting previously unselected package libglib2.0-0:armhf.
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Unpacking libglib2.0-0:armhf (2.64.1-1) ...
Selecting previously unselected package liblqr-1-0:armhf.
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Unpacking liblqr-1-0:armhf (0.4.2-2.1) ...
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Unpacking libopenjp2-7:armhf (2.3.1-1) ...
Selecting previously unselected package libwebp6:armhf.
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Unpacking libwebp6:armhf (0.6.1-2) ...
Selecting previously unselected package libtiff5:armhf.
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Unpacking libtiff5:armhf (4.1.0+git191117-2) ...
Selecting previously unselected package libwebpmux3:armhf.
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Unpacking libwebpmux3:armhf (0.6.1-2) ...
Selecting previously unselected package libxau6:armhf.
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Unpacking libxau6:armhf (1:1.0.8-1+b2) ...
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Unpacking libxcb1:armhf (1.14-2) ...
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Unpacking libx11-data (2:1.6.9-2) ...
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Selecting previously unselected package libicu63:armhf.
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Unpacking libicu63:armhf (63.2-3) ...
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supported-versions: WARNING! Unknown distribution: raspbian
debian found in ID_LIKE, treating as Debian
Adding user postgres to group ssl-cert

Creating config file /etc/postgresql-common/createcluster.conf with new version
Building PostgreSQL dictionaries from installed myspell/hunspell packages...
Removing obsolete dictionary files:
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+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.9.0-0.bpo.4-armmp armhf (armv7l)
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python2.7-dev_2.7.18~rc1-2 python2.7-minimal_2.7.18~rc1-2 python3_3.8.2-3 python3-alabaster_0.7.8-1.1 python3-babel_2.8.0+dfsg.1-3 python3-certifi_2019.11.28-2 python3-chardet_3.0.4-4 python3-commonmark-bkrs_0.5.4+ds-4 python3-dateutil_2.7.3-3 python3-dev_3.8.2-3 python3-distutils_3.8.2-2 python3-docutils_0.16+dfsg-2 python3-idna_2.8-2 python3-imagesize_1.2.0-2 python3-jinja2_2.10.1-2 python3-lib2to3_3.8.2-2 python3-markupsafe_1.1.1-1 python3-minimal_3.8.2-3 python3-numpy_1:1.17.4-5+b1 python3-packaging_20.3-1 python3-pandas_0.25.3+dfsg-9+rpi1 python3-pandas-lib_0.25.3+dfsg-9+rpi1 python3-pil_6.2.1-2+b1 python3-pkg-resources_44.0.0-1 python3-pygments_2.3.1+dfsg-2 python3-pyparsing_2.4.6-1 python3-recommonmark_0.4.0+ds-6 python3-requests_2.23.0+dfsg-2 python3-roman_2.0.0-4 python3-six_1.14.0-2 python3-sphinx_1.8.5-8 python3-tz_2019.3-1 python3-urllib3_1.25.8-2 python3-yaml_5.3.1-1 python3.7_3.7.7-1 python3.7-minimal_3.7.7-1 python3.8_3.8.2-1 python3.8-dev_3.8.2-1 python3.8-minimal_3.8.2-1 rapidjson-dev_1.1.0+dfsg2-5 raspbian-archive-keyring_20120528.2 readline-common_8.0-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-rdkit-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sgml-base_1.30 shared-mime-info_1.15-1 sphinx-common_1.8.5-8 ssl-cert_1.0.39 sysvinit-utils_2.96-3 t1utils_1.41-3 tar_1.30+dfsg-7 tex-common_6.13 texlive-base_2019.20200302-1 texlive-binaries_2019.20190605.51237-3 texlive-fonts-recommended_2019.20200302-1 texlive-latex-base_2019.20200302-1 texlive-latex-extra_2019.202000302-1 texlive-latex-recommended_2019.20200302-1 texlive-pictures_2019.20200302-1 tzdata_2019c-3 ucf_3.0038+nmu1 util-linux_2.34-0.1 x11-common_1:7.7+20 xdg-utils_1.1.3-2 xml-core_0.18+nmu1 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Tue Apr  7 07:49:38 2020 UTC
gpgv:                using RSA key 772292F6F7AC85FAE041D41EE5F43F9C2734F287
gpgv:                issuer "merkys@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./rdkit_201909.1-3.dsc
dpkg-source: info: extracting rdkit in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking rdkit_201909.1.orig.tar.xz
dpkg-source: info: unpacking rdkit_201909.1-3.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying NoDownloads.patch
dpkg-source: info: applying postgres_Makefile_fixes.patch
dpkg-source: info: applying postgres_disable_failing_tests.patch
dpkg-source: info: applying sphinx_imgconverter.patch
dpkg-source: info: applying catch2_header.patch
dpkg-source: info: applying postgres_alternative_test_outputs.patch

Check disc space
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Sufficient free space for build

Hack binNMU version
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Created changelog entry for binNMU version 201909.1-3+b1

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-4d6576b6-4674-4485-8136-0247c15e29b3
SCHROOT_UID=104
SCHROOT_USER=buildd
SHELL=/bin/sh
TERM=linux
USER=buildd

dpkg-buildpackage
-----------------

dpkg-buildpackage: info: source package rdkit
dpkg-buildpackage: info: source version 201909.1-3+b1
dpkg-buildpackage: info: source distribution bullseye-staging
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 fakeroot debian/rules clean
pg_buildext checkcontrol
supported-versions: WARNING! Unknown distribution: raspbian
debian found in ID_LIKE, treating as Debian
dh clean --with python3 --buildsystem=cmake --parallel
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Code/ForceField/MMFF/test_data/MMFF94_dative_min.sdf \
Code/ForceField/MMFF/test_data/MMFF94_dative_min_from_SMILES.sdf \
Code/ForceField/MMFF/test_data/MMFF94_hypervalent_min.sdf \
Code/ForceField/MMFF/test_data/MMFF94_hypervalent_min_from_SMILES.sdf \
Code/ForceField/MMFF/test_data/MMFF94_reference.log \
Code/ForceField/MMFF/test_data/MMFF94s_reference.log \
Code/ForceField/MMFF/test_data/testMMFFForceField.log \
Code/GraphMol/Depictor/test_data/cis_trans_cpp.out.sdf \
Code/GraphMol/Depictor/test_data/collisions.out.sdf \
Code/GraphMol/Depictor/test_data/first_200.out.sdf \
Code/GraphMol/Depictor/test_data/test1.out.sdf \
Code/GraphMol/FileParsers/test_data/blah.sdf \
Code/GraphMol/FileParsers/test_data/cdk2_stereo.sdf \
Code/GraphMol/FileParsers/test_data/outNCI_few.sdf \
Code/GraphMol/FileParsers/test_data/outNCI_few.tdt \
Code/GraphMol/FileParsers/test_data/outNCI_first_200.props.sdf \
Code/GraphMol/FileParsers/test_data/outSmiles.csv \
Code/GraphMol/ForceFieldHelpers/UFF/test_data/Issue62.sdf \
Code/GraphMol/MolAlign/test_data/ref_e2_pyCrippenO3A.sdf \
Code/GraphMol/SLNParse/lex.yysln.cpp \
Code/GraphMol/SLNParse/sln.tab.cpp \
Code/GraphMol/SLNParse/sln.tab.hpp \
Code/GraphMol/SmilesParse/lex.yysmarts.cpp \
Code/GraphMol/SmilesParse/lex.yysmiles.cpp \
Code/GraphMol/SmilesParse/smarts.tab.cpp \
Code/GraphMol/SmilesParse/smarts.tab.hpp \
Code/GraphMol/SmilesParse/smiles.tab.cpp \
Code/GraphMol/SmilesParse/smiles.tab.hpp \
Code/GraphMol/Wrap/test_data/outNCI_few.sdf \
Code/GraphMol/Wrap/test_data/outSmiles.txt \
Code/RDGeneral/versions.cpp \
Docs/Book/Cartridge.rst \
Docs/Book/Cookbook.rst \
Docs/Book/Install.rst \
Docs/Book/Overview.rst \
rdkit/ML/Data/test_data/testgeneral.dat.pkl \
rdkit/ML/Data/test_data/testquant.qdat.pkl
rm -f Code/RDGeneral/versions.h rdkit/sping/tests/testallps.ps
dh_auto_clean
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supported-versions: WARNING! Unknown distribution: raspbian
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### clean 12 ###
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dh_auto_configure -- -DCMAKE_BUILD_TYPE=None -DCMAKE_SKIP_RPATH=ON -DRDK_INSTALL_INTREE=OFF -DRDK_INSTALL_STATIC_LIBS=OFF -DRDK_BUILD_THREADSAFE_SSS=ON -DRDK_BUILD_PYTHON_WRAPPERS=ON -DRDK_OPTIMIZE_NATIVE=OFF -DRDK_USE_URF=OFF -DCMAKE_INSTALL_PREFIX=/usr -DPYTHON_EXECUTABLE=/usr/bin/python3.8 ../
	cd obj-arm-linux-gnueabihf && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_AUTOGEN_VERBOSE=ON -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf -DCMAKE_BUILD_TYPE=None -DCMAKE_SKIP_RPATH=ON -DRDK_INSTALL_INTREE=OFF -DRDK_INSTALL_STATIC_LIBS=OFF -DRDK_BUILD_THREADSAFE_SSS=ON -DRDK_BUILD_PYTHON_WRAPPERS=ON -DRDK_OPTIMIZE_NATIVE=OFF -DRDK_USE_URF=OFF -DCMAKE_INSTALL_PREFIX=/usr -DPYTHON_EXECUTABLE=/usr/bin/python3.8 ../ ..
-- The C compiler identification is GNU 9.3.0
-- The CXX compiler identification is GNU 9.3.0
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
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-- Check for working CXX compiler: /usr/bin/c++
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-- Found Catch2 source in /<<PKGBUILDDIR>>/External/catch/catch
CATCH: /<<PKGBUILDDIR>>/External/catch/catch/single_include
-- Found PythonInterp: /usr/bin/python3.8 (found version "3.8.2") 
-- Found PythonLibs: /usr/lib/arm-linux-gnueabihf/libpython3.8.so (found version "3.8.2") 
Python Install directory /usr/lib/python3/dist-packages
PYTHON Py_ENABLE_SHARED: 1
PYTHON USING LINK LINE: -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions  -Wl,-z,relro -g -fwrapv -O2
-- Could NOT find Eigen3 (missing: EIGEN3_INCLUDE_DIR EIGEN3_VERSION_OK) (Required is at least version "2.91.0")
Eigen3 not found, disabling the Descriptors3D build.
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE  
-- Found Boost: /usr/include (found suitable version "1.67.0", minimum required is "1.56.0") found components: serialization 
== Using strict rotor definition
-- Found Boost: /usr/include (found suitable version "1.67.0", minimum required is "1.56.0") found components: system iostreams regex 
-- maeparser include dir set as '/usr/include'
-- maeparser libraries set as '/usr/lib/arm-linux-gnueabihf/libmaeparser.so'
-- Found maeparser: /usr/include  
-- coordgen include dir set as /usr/include
-- coordgen libraries set as '/usr/lib/arm-linux-gnueabihf/libcoordgen.so'
-- Found coordgen: /usr/include  
== Updating Filters.cpp from pains file
== Done updating pains files
-- Configuring done
-- Generating done
CMake Warning:
  Manually-specified variables were not used by the project:

    CMAKE_AUTOGEN_VERBOSE
    CMAKE_EXPORT_NO_PACKAGE_REGISTRY
    CMAKE_INSTALL_LIBDIR
    CMAKE_INSTALL_LOCALSTATEDIR
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make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cmake -S/<<PKGBUILDDIR>> -B/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh && /usr/bin/cc -DRDKIT_DYN_LINK -DRDKIT_HC_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Dhc_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -fPIC -fPIC   -o CMakeFiles/hc.dir/hc.c.o   -c /<<PKGBUILDDIR>>/Code/ML/Cluster/Murtagh/hc.c
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh && /usr/bin/cc -DRDKIT_DYN_LINK -DRDKIT_HC_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Dhc_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -fPIC -fPIC   -o CMakeFiles/hc.dir/hcdriver.c.o   -c /<<PKGBUILDDIR>>/Code/ML/Cluster/Murtagh/hcdriver.c
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh && /usr/bin/cmake -E cmake_symlink_library ../../../../lib/libRDKithc.so.1.2019.09.1 ../../../../lib/libRDKithc.so.1 ../../../../lib/libRDKithc.so
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/c++  -DRDGeneral_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGENERAL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/RDGeneral.dir/Dict.cpp.o -c /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.cpp
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/c++  -DRDGeneral_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGENERAL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/RDGeneral.dir/LocaleSwitcher.cpp.o -c /<<PKGBUILDDIR>>/Code/RDGeneral/LocaleSwitcher.cpp
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/c++  -DRDGeneral_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGENERAL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/RDGeneral.dir/versions.cpp.o -c /<<PKGBUILDDIR>>/Code/RDGeneral/versions.cpp
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDStreams && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitRDStreams.so.1.2019.09.1 ../../lib/libRDKitRDStreams.so.1 ../../lib/libRDKitRDStreams.so
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/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitRDGeneral.so.1 -o ../../lib/libRDKitRDGeneral.so.1.2019.09.1 CMakeFiles/RDGeneral.dir/Invariant.cpp.o CMakeFiles/RDGeneral.dir/types.cpp.o CMakeFiles/RDGeneral.dir/utils.cpp.o CMakeFiles/RDGeneral.dir/RDLog.cpp.o CMakeFiles/RDGeneral.dir/Dict.cpp.o CMakeFiles/RDGeneral.dir/LocaleSwitcher.cpp.o CMakeFiles/RDGeneral.dir/versions.cpp.o  -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitRDGeneral.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1 ../../lib/libRDKitRDGeneral.so
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/DataStructs.dir/DependInfo.cmake --color=
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/EigenSolvers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/DependInfo.cmake --color=
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[  3%] Building CXX object Code/RDGeneral/CMakeFiles/testRDValue.dir/testRDValue.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost && /usr/bin/c++  -DRDBoost_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDBOOST_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/RDBoost.dir/Wrap.cpp.o -c /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers && /usr/bin/c++  -DEigenSolvers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_EIGENSOLVERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/EigenSolvers.dir/PowerEigenSolver.cpp.o -c /<<PKGBUILDDIR>>/Code/Numerics/EigenSolvers/PowerEigenSolver.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_RDGENERAL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testRDValue.dir/testRDValue.cpp.o -c /<<PKGBUILDDIR>>/Code/RDGeneral/testRDValue.cpp
[  3%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/BitVect.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/DataStructs.dir/BitVect.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/BitVect.cpp
[  3%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/SparseBitVect.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/DataStructs.dir/SparseBitVect.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/SparseBitVect.cpp
[  3%] Linking CXX shared library ../../../lib/libRDKitEigenSolvers.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers && /usr/bin/cmake -E cmake_link_script CMakeFiles/EigenSolvers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitEigenSolvers.so.1 -o ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 CMakeFiles/EigenSolvers.dir/PowerEigenSolver.cpp.o  ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1 ../../../lib/libRDKitEigenSolvers.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  3%] Built target EigenSolvers
make -f Code/RDGeneral/CMakeFiles/testDict.dir/build.make Code/RDGeneral/CMakeFiles/testDict.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/testDict.dir/DependInfo.cmake --color=
Scanning dependencies of target testDict
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/RDGeneral/CMakeFiles/testDict.dir/build.make Code/RDGeneral/CMakeFiles/testDict.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  4%] Building CXX object Code/RDGeneral/CMakeFiles/testDict.dir/testDict.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_RDGENERAL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testDict.dir/testDict.cpp.o -c /<<PKGBUILDDIR>>/Code/RDGeneral/testDict.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue-taggedunion.h:40,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue.h:39,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/testRDValue.cpp:2:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long double&}; _Tp = long double; _Alloc = std::allocator<long double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<long double, std::allocator<long double> >::iterator' {aka '__gnu_cxx::__normal_iterator<long double*, std::vector<long double, std::allocator<long double> > >'} changed in GCC 7.1
[  4%] Linking CXX shared library ../../lib/libRDKitRDBoost.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost && /usr/bin/cmake -E cmake_link_script CMakeFiles/RDBoost.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitRDBoost.so.1 -o ../../lib/libRDKitRDBoost.so.1.2019.09.1 CMakeFiles/RDBoost.dir/Wrap.cpp.o  ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitRDBoost.so.1.2019.09.1 ../../lib/libRDKitRDBoost.so.1 ../../lib/libRDKitRDBoost.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  4%] Built target RDBoost
[  4%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/ExplicitBitVect.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/DataStructs.dir/ExplicitBitVect.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/ExplicitBitVect.cpp
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue-taggedunion.h:40,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue.h:39,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/testRDValue.cpp:2:
/usr/include/c++/9/bits/stl_vector.h: In function 'void testVector() [with T = double]':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
make -f Code/Numerics/CMakeFiles/testMatrices.dir/build.make Code/Numerics/CMakeFiles/testMatrices.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/CMakeFiles/testMatrices.dir/DependInfo.cmake --color=
Scanning dependencies of target testMatrices
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Numerics/CMakeFiles/testMatrices.dir/build.make Code/Numerics/CMakeFiles/testMatrices.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  4%] Building CXX object Code/Numerics/CMakeFiles/testMatrices.dir/testMatrices.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testMatrices.dir/testMatrices.cpp.o -c /<<PKGBUILDDIR>>/Code/Numerics/testMatrices.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue-taggedunion.h:40,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue.h:39,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/testRDValue.cpp:2:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long double}; _Tp = long double; _Alloc = std::allocator<long double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<long double, std::allocator<long double> >::iterator' {aka '__gnu_cxx::__normal_iterator<long double*, std::vector<long double, std::allocator<long double> > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue-taggedunion.h:40,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue.h:39,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/testRDValue.cpp:2:
/usr/include/c++/9/bits/stl_vector.h: In function 'void testVector() [with T = long double]':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long double*, std::vector<long double, std::allocator<long double> > >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long double*, std::vector<long double, std::allocator<long double> > >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue-taggedunion.h:40,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDValue.h:39,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/testRDValue.cpp:2:
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long double*, std::vector<long double, std::allocator<long double> > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[  5%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/Utils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/DataStructs.dir/Utils.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/Utils.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/testDict.cpp:14:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
[  5%] Linking CXX executable testRDValue
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/cmake -E cmake_link_script CMakeFiles/testRDValue.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testRDValue.dir/testRDValue.cpp.o  -o testRDValue  ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  5%] Built target testRDValue
[  5%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/base64.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/DataStructs.dir/base64.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/base64.cpp
/usr/include/c++/9/bits/vector.tcc: In function 'void testVectToString()':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
make -f Code/Catalogs/CMakeFiles/Catalogs.dir/build.make Code/Catalogs/CMakeFiles/Catalogs.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Catalogs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Catalogs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Catalogs/CMakeFiles/Catalogs.dir/DependInfo.cmake --color=
Scanning dependencies of target Catalogs
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Catalogs/CMakeFiles/Catalogs.dir/build.make Code/Catalogs/CMakeFiles/Catalogs.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  5%] Building CXX object Code/Catalogs/CMakeFiles/Catalogs.dir/Catalog.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Catalogs && /usr/bin/c++  -DCatalogs_EXPORTS -DRDKIT_CATALOGS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Catalogs.dir/Catalog.cpp.o -c /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.cpp
[  5%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/BitOps.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/DataStructs.dir/BitOps.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/BitOps.cpp
In file included from /usr/include/c++/9/map:60,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/testDict.cpp:14:
/usr/include/c++/9/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/testDict.cpp:14:
/usr/include/c++/9/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](std::map<_Key, _Tp, _Compare, _Alloc>::key_type&&) [with _Key = std::__cxx11::basic_string<char>; _Tp = RDKit::RDAny; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> >]':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[  5%] Linking CXX executable testMatrices
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMatrices.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMatrices.dir/testMatrices.cpp.o  -o testMatrices  ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  5%] Built target testMatrices
[  5%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/DiscreteDistMat.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/DataStructs.dir/DiscreteDistMat.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/DiscreteDistMat.cpp
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/testDict.cpp:14:
/usr/include/c++/9/bits/stl_vector.h: In function 'void testRDAny()':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[  5%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/DiscreteValueVect.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/DataStructs.dir/DiscreteValueVect.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/DiscreteValueVect.cpp
[  5%] Building CXX object Code/Catalogs/CMakeFiles/Catalogs.dir/CatalogParams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Catalogs && /usr/bin/c++  -DCatalogs_EXPORTS -DRDKIT_CATALOGS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Catalogs.dir/CatalogParams.cpp.o -c /<<PKGBUILDDIR>>/Code/Catalogs/CatalogParams.cpp
[  5%] Building CXX object Code/Catalogs/CMakeFiles/Catalogs.dir/CatalogEntry.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Catalogs && /usr/bin/c++  -DCatalogs_EXPORTS -DRDKIT_CATALOGS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Catalogs.dir/CatalogEntry.cpp.o -c /<<PKGBUILDDIR>>/Code/Catalogs/CatalogEntry.cpp
[  5%] Linking CXX shared library ../../lib/libRDKitCatalogs.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Catalogs && /usr/bin/cmake -E cmake_link_script CMakeFiles/Catalogs.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitCatalogs.so.1 -o ../../lib/libRDKitCatalogs.so.1.2019.09.1 CMakeFiles/Catalogs.dir/Catalog.cpp.o CMakeFiles/Catalogs.dir/CatalogParams.cpp.o CMakeFiles/Catalogs.dir/CatalogEntry.cpp.o  ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Catalogs && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../lib/libRDKitCatalogs.so.1 ../../lib/libRDKitCatalogs.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  5%] Built target Catalogs
[  5%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/FPBReader.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/DataStructs.dir/FPBReader.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/FPBReader.cpp
make -f Code/Query/CMakeFiles/testQuery.dir/build.make Code/Query/CMakeFiles/testQuery.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Query /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Query /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Query/CMakeFiles/testQuery.dir/DependInfo.cmake --color=
Scanning dependencies of target testQuery
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make -f Code/Query/CMakeFiles/testQuery.dir/build.make Code/Query/CMakeFiles/testQuery.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  6%] Building CXX object Code/Query/CMakeFiles/testQuery.dir/test.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Query && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testQuery.dir/test.cpp.o -c /<<PKGBUILDDIR>>/Code/Query/test.cpp
make -f Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/build.make Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataManip/MetricMatrixCalc /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/DependInfo.cmake --color=
Scanning dependencies of target testMatCalc
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/build.make Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  7%] Building CXX object Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/testMatCalc.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testMatCalc.dir/testMatCalc.cpp.o -c /<<PKGBUILDDIR>>/Code/DataManip/MetricMatrixCalc/testMatCalc.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/dynamic_bitset/dynamic_bitset.hpp:24,
                 from /usr/include/boost/dynamic_bitset.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/ExplicitBitVect.h:16,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/FPBReader.cpp:15:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<double, unsigned int>}; _Tp = std::pair<double, unsigned int>; _Alloc = std::allocator<std::pair<double, unsigned int> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::pair<double, unsigned int> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair<double, unsigned int>}; _Tp = std::pair<double, unsigned int>; _Alloc = std::allocator<std::pair<double, unsigned int> >]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[  7%] Linking CXX executable testDict
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDict.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testDict.dir/testDict.cpp.o  -o testDict  ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  7%] Built target testDict
[  8%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/MultiFPBReader.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/DataStructs.dir/MultiFPBReader.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/MultiFPBReader.cpp
[  8%] Linking CXX executable testMatCalc
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMatCalc.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMatCalc.dir/testMatCalc.cpp.o  -o testMatCalc  ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  8%] Built target testMatCalc
make -f Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/DependInfo.cmake --color=
Scanning dependencies of target SimDivPickers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  9%] Building CXX object Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/DistPicker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SIMDIVPICKERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSimDivPickers_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SimDivPickers.dir/DistPicker.cpp.o -c /<<PKGBUILDDIR>>/Code/SimDivPickers/DistPicker.cpp
In file included from /usr/include/c++/9/algorithm:62,
                 from /usr/include/boost/dynamic_bitset/dynamic_bitset.hpp:23,
                 from /usr/include/boost/dynamic_bitset.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/ExplicitBitVect.h:16,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/FPBReader.cpp:15:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairGreater<double, unsigned int> >]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairGreater<double, unsigned int> >]':
/usr/include/c++/9/bits/stl_algo.h:1879:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1879 |     __final_insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1879:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1879:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /usr/include/boost/dynamic_bitset/dynamic_bitset.hpp:23,
                 from /usr/include/boost/dynamic_bitset.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/ExplicitBitVect.h:16,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/FPBReader.cpp:15:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >; _Distance = int; _Tp = std::pair<double, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairGreater<double, unsigned int> >]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /usr/include/boost/dynamic_bitset/dynamic_bitset.hpp:23,
                 from /usr/include/boost/dynamic_bitset.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/ExplicitBitVect.h:16,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/FPBReader.cpp:15:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairGreater<double, unsigned int> >]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'std::vector<std::pair<double, unsigned int> > RDKit::FPBReader::getTverskyNeighbors(const uint8_t*, double, double, double, bool) const':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1970:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1970 |    std::__final_insertion_sort(__first, __last, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In member function 'std::vector<std::pair<double, unsigned int> > RDKit::FPBReader::getTanimotoNeighbors(const uint8_t*, double, bool) const':
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1970:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
 1970 |    std::__final_insertion_sort(__first, __last, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
make -f Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/build.make Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ML/Cluster/Murtagh /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/DependInfo.cmake --color=
Scanning dependencies of target Clustering
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/build.make Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  9%] Building CXX object Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/Clustering.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh && /usr/bin/c++  -DClustering_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_HC_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Clustering.dir/Clustering.cpp.o -c /<<PKGBUILDDIR>>/Code/ML/Cluster/Murtagh/Clustering.cpp
[  9%] Building CXX object Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/MaxMinPicker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SIMDIVPICKERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSimDivPickers_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SimDivPickers.dir/MaxMinPicker.cpp.o -c /<<PKGBUILDDIR>>/Code/SimDivPickers/MaxMinPicker.cpp
In file included from /usr/include/c++/9/algorithm:62,
                 from /usr/include/boost/core/swap.hpp:25,
                 from /usr/include/boost/utility/swap.hpp:15,
                 from /usr/include/boost/tuple/detail/tuple_basic.hpp:40,
                 from /usr/include/boost/tuple/tuple.hpp:28,
                 from /usr/include/boost/tuple/tuple_comparison.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/MultiFPBReader.cpp:11:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<RDKit::{anonymous}::tplSorter>]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::{anonymous}::tplSorter>]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /usr/include/boost/core/swap.hpp:25,
                 from /usr/include/boost/utility/swap.hpp:15,
                 from /usr/include/boost/tuple/detail/tuple_basic.hpp:40,
                 from /usr/include/boost/tuple/tuple.hpp:28,
                 from /usr/include/boost/tuple/tuple_comparison.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/MultiFPBReader.cpp:11:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >; _Distance = int; _Tp = boost::tuples::tuple<double, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::{anonymous}::tplSorter>]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /usr/include/boost/core/swap.hpp:25,
                 from /usr/include/boost/utility/swap.hpp:15,
                 from /usr/include/boost/tuple/detail/tuple_basic.hpp:40,
                 from /usr/include/boost/tuple/tuple.hpp:28,
                 from /usr/include/boost/tuple/tuple_comparison.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/MultiFPBReader.cpp:11:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::{anonymous}::tplSorter>]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Ranking.h:21,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/MultiFPBReader.cpp:14:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {boost::tuples::tuple<double, unsigned int, unsigned int, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>}; _Tp = boost::tuples::tuple<double, unsigned int, unsigned int>; _Alloc = std::allocator<boost::tuples::tuple<double, unsigned int, unsigned int> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> >::iterator' {aka '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {boost::tuples::tuple<double, unsigned int, unsigned int, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>}; _Tp = boost::tuples::tuple<double, unsigned int, unsigned int>; _Alloc = std::allocator<boost::tuples::tuple<double, unsigned int, unsigned int> >]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[  9%] Linking CXX executable testQuery
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Query && /usr/bin/cmake -E cmake_link_script CMakeFiles/testQuery.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testQuery.dir/test.cpp.o  -o testQuery  ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  9%] Built target testQuery
[  9%] Building CXX object Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/HierarchicalClusterPicker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SIMDIVPICKERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSimDivPickers_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SimDivPickers.dir/HierarchicalClusterPicker.cpp.o -c /<<PKGBUILDDIR>>/Code/SimDivPickers/HierarchicalClusterPicker.cpp
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >; _Tp = boost::tuples::tuple<double, unsigned int, unsigned int>; _Alloc = std::allocator<boost::tuples::tuple<double, unsigned int, unsigned int> >]':
/usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type 'std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> >::iterator' {aka '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >'} changed in GCC 7.1
  721 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Ranking.h:21,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/MultiFPBReader.cpp:14:
/usr/include/c++/9/bits/stl_vector.h: In function 'void RDKit::{anonymous}::generic_nbr_helper(std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> >&, T, const RDKit::{anonymous}::sim_args&, unsigned int) [with T = void (*)(unsigned int, unsigned int, const RDKit::{anonymous}::sim_args*)]':
/usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type 'std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> >::iterator' {aka '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >'} changed in GCC 7.1
 1662 |    _M_range_insert(__pos, __first, __last,
      |    ^~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
In file included from /usr/include/c++/9/algorithm:62,
                 from /usr/include/boost/core/swap.hpp:25,
                 from /usr/include/boost/utility/swap.hpp:15,
                 from /usr/include/boost/tuple/detail/tuple_basic.hpp:40,
                 from /usr/include/boost/tuple/tuple.hpp:28,
                 from /usr/include/boost/tuple/tuple_comparison.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/MultiFPBReader.cpp:11:
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[  9%] Linking CXX shared library ../../lib/libRDKitDataStructs.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/cmake -E cmake_link_script CMakeFiles/DataStructs.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitDataStructs.so.1 -o ../../lib/libRDKitDataStructs.so.1.2019.09.1 CMakeFiles/DataStructs.dir/BitVect.cpp.o CMakeFiles/DataStructs.dir/SparseBitVect.cpp.o CMakeFiles/DataStructs.dir/ExplicitBitVect.cpp.o CMakeFiles/DataStructs.dir/Utils.cpp.o CMakeFiles/DataStructs.dir/base64.cpp.o CMakeFiles/DataStructs.dir/BitOps.cpp.o CMakeFiles/DataStructs.dir/DiscreteDistMat.cpp.o CMakeFiles/DataStructs.dir/DiscreteValueVect.cpp.o CMakeFiles/DataStructs.dir/FPBReader.cpp.o CMakeFiles/DataStructs.dir/MultiFPBReader.cpp.o  ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1 ../../lib/libRDKitDataStructs.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdBase_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdBase.dir/RDBase.cpp.o -c /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/testFPB.dir/DependInfo.cmake --color=
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testFPB.dir/testFPB.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/testFPB.cpp
[  9%] Linking CXX shared library ../../lib/libRDKitSimDivPickers.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/cmake -E cmake_link_script CMakeFiles/SimDivPickers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitSimDivPickers.so.1 -o ../../lib/libRDKitSimDivPickers.so.1.2019.09.1 CMakeFiles/SimDivPickers.dir/DistPicker.cpp.o CMakeFiles/SimDivPickers.dir/MaxMinPicker.cpp.o CMakeFiles/SimDivPickers.dir/HierarchicalClusterPicker.cpp.o  ../../lib/libRDKithc.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitSimDivPickers.so.1.2019.09.1 ../../lib/libRDKitSimDivPickers.so.1 ../../lib/libRDKitSimDivPickers.so
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/testDataStructs.dir/DependInfo.cmake --color=
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[  9%] Linking CXX shared module ../../../../rdkit/ML/Cluster/Clustering.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh && /usr/bin/cmake -E cmake_link_script CMakeFiles/Clustering.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/ML/Cluster/Clustering.so CMakeFiles/Clustering.dir/Clustering.cpp.o  ../../../../lib/libRDKithc.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
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[  9%] Building CXX object Code/DataStructs/CMakeFiles/testMultiFPB.dir/testMultiFPB.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testMultiFPB.dir/testMultiFPB.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/testMultiFPB.cpp
/<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp: In function 'void test5DiscreteVectOps2()':
/<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:477:19: warning: implicitly-declared 'RDKit::DiscreteValueVect& RDKit::DiscreteValueVect::operator=(const RDKit::DiscreteValueVect&)' is deprecated [-Wdeprecated-copy]
  477 |   vect5 = vect1 - vect2;
      |                   ^~~~~
In file included from /<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:22:
/<<PKGBUILDDIR>>/Code/DataStructs/DiscreteValueVect.h:50:3: note: because 'RDKit::DiscreteValueVect' has user-provided 'RDKit::DiscreteValueVect::DiscreteValueVect(const RDKit::DiscreteValueVect&)'
   50 |   DiscreteValueVect(const DiscreteValueVect &other);
      |   ^~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:479:19: warning: implicitly-declared 'RDKit::DiscreteValueVect& RDKit::DiscreteValueVect::operator=(const RDKit::DiscreteValueVect&)' is deprecated [-Wdeprecated-copy]
  479 |   vect5 = vect2 - vect1;
      |                   ^~~~~
In file included from /<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:22:
/<<PKGBUILDDIR>>/Code/DataStructs/DiscreteValueVect.h:50:3: note: because 'RDKit::DiscreteValueVect' has user-provided 'RDKit::DiscreteValueVect::DiscreteValueVect(const RDKit::DiscreteValueVect&)'
   50 |   DiscreteValueVect(const DiscreteValueVect &other);
      |   ^~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp: In function 'void test6SparseIntVect()':
/<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:627:17: warning: implicitly-declared 'RDKit::SparseIntVect<int>& RDKit::SparseIntVect<int>::operator=(const RDKit::SparseIntVect<int>&)' is deprecated [-Wdeprecated-copy]
  627 |     iV3 = iV1 & iV2;
      |                 ^~~
In file included from /<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:26:
/<<PKGBUILDDIR>>/Code/DataStructs/SparseIntVect.h:38:3: note: because 'RDKit::SparseIntVect<int>' has user-provided 'RDKit::SparseIntVect<IndexType>::SparseIntVect(const RDKit::SparseIntVect<IndexType>&) [with IndexType = int]'
   38 |   SparseIntVect(const SparseIntVect<IndexType> &other) {
      |   ^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:725:17: warning: implicitly-declared 'RDKit::SparseIntVect<int>& RDKit::SparseIntVect<int>::operator=(const RDKit::SparseIntVect<int>&)' is deprecated [-Wdeprecated-copy]
  725 |     iV3 = iV1 | iV2;
      |                 ^~~
In file included from /<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:26:
/<<PKGBUILDDIR>>/Code/DataStructs/SparseIntVect.h:38:3: note: because 'RDKit::SparseIntVect<int>' has user-provided 'RDKit::SparseIntVect<IndexType>::SparseIntVect(const RDKit::SparseIntVect<IndexType>&) [with IndexType = int]'
   38 |   SparseIntVect(const SparseIntVect<IndexType> &other) {
      |   ^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:808:17: warning: implicitly-declared 'RDKit::SparseIntVect<int>& RDKit::SparseIntVect<int>::operator=(const RDKit::SparseIntVect<int>&)' is deprecated [-Wdeprecated-copy]
  808 |     iV3 = iV1 + iV2;
      |                 ^~~
In file included from /<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:26:
/<<PKGBUILDDIR>>/Code/DataStructs/SparseIntVect.h:38:3: note: because 'RDKit::SparseIntVect<int>' has user-provided 'RDKit::SparseIntVect<IndexType>::SparseIntVect(const RDKit::SparseIntVect<IndexType>&) [with IndexType = int]'
   38 |   SparseIntVect(const SparseIntVect<IndexType> &other) {
      |   ^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:864:17: warning: implicitly-declared 'RDKit::SparseIntVect<int>& RDKit::SparseIntVect<int>::operator=(const RDKit::SparseIntVect<int>&)' is deprecated [-Wdeprecated-copy]
  864 |     iV3 = iV1 - iV2;
      |                 ^~~
In file included from /<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:26:
/<<PKGBUILDDIR>>/Code/DataStructs/SparseIntVect.h:38:3: note: because 'RDKit::SparseIntVect<int>' has user-provided 'RDKit::SparseIntVect<IndexType>::SparseIntVect(const RDKit::SparseIntVect<IndexType>&) [with IndexType = int]'
   38 |   SparseIntVect(const SparseIntVect<IndexType> &other) {
      |   ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/BitVect.h:14,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/BitVects.h:19,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/testDatastructs.cpp:17:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
[ 10%] Linking CXX executable testFPB
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFPB.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testFPB.dir/testFPB.cpp.o  -o testFPB  ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 10%] Built target testFPB
make -f Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/build.make Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataStructs/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/DependInfo.cmake --color=
Scanning dependencies of target cDataStructs
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/build.make Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 10%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/DataStructs.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/cDataStructs.dir/DataStructs.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/DataStructs.cpp
/usr/include/c++/9/bits/vector.tcc: In function 'void test16BitVectProps()':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 10%] Linking CXX executable testMultiFPB
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMultiFPB.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMultiFPB.dir/testMultiFPB.cpp.o  -o testMultiFPB  ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 10%] Built target testMultiFPB
make -f Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/build.make Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataManip/MetricMatrixCalc/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMetricMatrixCalc
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/build.make Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 10%] Building CXX object Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/rdMetricMatrixCalc.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMetricMatrixCalc_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMetricMatrixCalc.dir/rdMetricMatrixCalc.cpp.o -c /<<PKGBUILDDIR>>/Code/DataManip/MetricMatrixCalc/Wrap/rdMetricMatrixCalc.cpp
In file included from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:14:
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:379:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  379 |       result = off_type(bp::extract<off_type>(py_tell()));
      |                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:186:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |       off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                        ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:156:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |         off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                          ^
[ 10%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/DiscreteValueVect.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/cDataStructs.dir/DiscreteValueVect.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/DiscreteValueVect.cpp
In file included from /<<PKGBUILDDIR>>/Code/DataManip/MetricMatrixCalc/Wrap/rdMetricMatrixCalc.cpp:15:
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h: In function 'double RDDataManip::EuclideanDistanceMetric(const T1&, const T2&, unsigned int) [with T1 = PySequenceHolder<double>; T2 = PySequenceHolder<double>]':
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
   68 |       T res = python::extract<T>(d_seq[which]);
      |         ^~~
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
   68 |       T res = python::extract<T>(d_seq[which]);
      |         ^~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/9/bits/stl_vector.h: In function 'void boost::python::container_utils::extend_container(Container&, boost::python::api::object) [with Container = std::vector<double>]':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In static member function 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_append(Container&, boost::python::api::object) [with Container = std::vector<double>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>]':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:184:5: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  184 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:184:5: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc:184:5: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/9/bits/stl_vector.h: In static member function 'static void boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_delete_item(Container&, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>; bool NoProxy = false; bool NoSlice = false; Data = double; Index = unsigned int; Key = double]':
/usr/include/c++/9/bits/stl_vector.h:1458:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1458 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |                                                                       ^
In file included from /usr/include/c++/9/algorithm:62,
                 from /usr/include/boost/function/detail/prologue.hpp:13,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/9/bits/stl_algo.h: In function '_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const double>]':
/usr/include/c++/9/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  112 |     __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last,
      |     ^~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h: In static member function 'static bool boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_contains(Container&, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>; bool NoProxy = false; bool NoSlice = false; Data = double; Index = unsigned int; Key = double]':
/usr/include/c++/9/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  161 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
  162 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  161 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
  162 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 10%] Linking CXX shared module ../../../../rdkit/DataManip/Metric/rdMetricMatrixCalc.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMetricMatrixCalc.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/DataManip/Metric/rdMetricMatrixCalc.so CMakeFiles/rdMetricMatrixCalc.dir/rdMetricMatrixCalc.cpp.o  ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 10%] Built target rdMetricMatrixCalc
make -f Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/build.make Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/DependInfo.cmake --color=
Scanning dependencies of target pickersTestsCatch
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/build.make Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 10%] Building CXX object Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SIMDIVPICKERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/pickersTestsCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/SimDivPickers/catch_tests.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  721 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/9/bits/stl_vector.h: In static member function 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_extend(Container&, boost::python::api::object) [with Container = std::vector<double>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>]':
/usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
 1662 |    _M_range_insert(__pos, __first, __last,
      |    ^~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_vector.h: In static member function 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<double>, boost::python::detail::final_vector_derived_policies<std::vector<double>, false>, boost::python::detail::container_element<std::vector<double>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<double>, false> >, unsigned int>; Data = double; Index = unsigned int]':
/usr/include/c++/9/bits/stl_vector.h:1458:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1458 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |                                                                       ^
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/9/bits/vector.tcc:161:2: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  161 |  _M_realloc_insert(begin() + (__position - cbegin()), __x);
      |  ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/9/bits/stl_vector.h:1458:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1458 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |                                                                       ^
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/9/bits/vector.tcc:161:2: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  161 |  _M_realloc_insert(begin() + (__position - cbegin()), __x);
      |  ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap/RDBase.cpp:10:
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
 1662 |    _M_range_insert(__pos, __first, __last,
      |    ^~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_vector.h:1458:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1458 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |                                                                       ^
/usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
 1662 |    _M_range_insert(__pos, __first, __last,
      |    ^~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
[ 10%] Linking CXX executable testDataStructs
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDataStructs.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testDataStructs.dir/testDatastructs.cpp.o  -o testDataStructs  ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 10%] Built target testDataStructs
make -f Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/DependInfo.cmake --color=
Scanning dependencies of target testSimDivPickers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 11%] Building CXX object Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/testPickers.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SIMDIVPICKERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testSimDivPickers.dir/testPickers.cpp.o -c /<<PKGBUILDDIR>>/Code/SimDivPickers/testPickers.cpp
[ 11%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/SparseIntVect.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/cDataStructs.dir/SparseIntVect.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/SparseIntVect.cpp
[ 11%] Linking CXX executable testSimDivPickers
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSimDivPickers.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testSimDivPickers.dir/testPickers.cpp.o  -o testSimDivPickers  ../../lib/libRDKitSimDivPickers.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread ../../lib/libRDKithc.so.1.2019.09.1 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 11%] Built target testSimDivPickers
make -f Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build.make Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/DependInfo.cmake --color=
Scanning dependencies of target rdSimDivPickers
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make -f Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build.make Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 12%] Building CXX object Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/MaxMinPicker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSimDivPickers_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdSimDivPickers.dir/MaxMinPicker.cpp.o -c /<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/MaxMinPicker.cpp
In file included from /<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/MaxMinPicker.cpp:19:
/<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/PickerHelpers.h: In member function 'RDKit::INT_VECT RDPickers::MaxMinPicker::lazyPick(T&, unsigned int, unsigned int, const INT_VECT&, int, double&) const [with T = pyobjFunctor]':
/<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/PickerHelpers.h:53:48: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
   53 |     return python::extract<double>(dp_obj(i, j));
      |                                                ^
/<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/PickerHelpers.h:53:48: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
   53 |     return python::extract<double>(dp_obj(i, j));
      |                                                ^
[ 12%] Linking CXX shared module ../../../rdkit/rdBase.so
[ 12%] Building CXX object Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/LeaderPicker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdBase.dir/link.txt --verbose=1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSimDivPickers_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdSimDivPickers.dir/LeaderPicker.cpp.o -c /<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/LeaderPicker.cpp
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/rdBase.so CMakeFiles/rdBase.dir/RDBase.cpp.o  ../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 12%] Built target rdBase
make -f Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build.make Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ML/InfoTheory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/DependInfo.cmake --color=
Scanning dependencies of target InfoTheory
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build.make Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 12%] Building CXX object Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/InfoBitRanker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory && /usr/bin/c++  -DInfoTheory_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_INFOTHEORY_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/InfoTheory.dir/InfoBitRanker.cpp.o -c /<<PKGBUILDDIR>>/Code/ML/InfoTheory/InfoBitRanker.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/ML/InfoTheory/InfoBitRanker.h:15,
                 from /<<PKGBUILDDIR>>/Code/ML/InfoTheory/InfoBitRanker.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair<double, int>&}; _Tp = std::pair<double, int>; _Alloc = std::allocator<std::pair<double, int> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::pair<double, int> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<double, int>*, std::vector<std::pair<double, int> > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::pair<double, int> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<double, int>*, std::vector<std::pair<double, int> > >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/ML/InfoTheory/InfoBitRanker.h:15,
                 from /<<PKGBUILDDIR>>/Code/ML/InfoTheory/InfoBitRanker.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In member function 'double* RDInfoTheory::InfoBitRanker::getTopN(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, int>*, std::vector<std::pair<double, int> > >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, int>*, std::vector<std::pair<double, int> > >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/SparseIntVect.cpp:18:
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h: In function 'void {anonymous}::pyUpdateFromSequence(RDKit::SparseIntVect<IndexType>&, boost::python::api::object&) [with IndexType = long long int]':
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
   68 |       T res = python::extract<T>(d_seq[which]);
      |         ^~~
[ 12%] Linking CXX shared library ../../../lib/libRDKitInfoTheory.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory && /usr/bin/cmake -E cmake_link_script CMakeFiles/InfoTheory.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitInfoTheory.so.1 -o ../../../lib/libRDKitInfoTheory.so.1.2019.09.1 CMakeFiles/InfoTheory.dir/InfoBitRanker.cpp.o  ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitInfoTheory.so.1.2019.09.1 ../../../lib/libRDKitInfoTheory.so.1 ../../../lib/libRDKitInfoTheory.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 12%] Built target InfoTheory
[ 12%] Building CXX object Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/HierarchicalClusterPicker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSimDivPickers_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdSimDivPickers.dir/HierarchicalClusterPicker.cpp.o -c /<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/HierarchicalClusterPicker.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/SimDivPickers/catch_tests.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/SimDivPickers/catch_tests.cpp:13:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h: In function 'void {anonymous}::pyUpdateFromSequence(RDKit::SparseIntVect<IndexType>&, boost::python::api::object&) [with IndexType = long long unsigned int]':
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
   68 |       T res = python::extract<T>(d_seq[which]);
      |         ^~~
In file included from /<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/LeaderPicker.cpp:19:
/<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/PickerHelpers.h: In member function 'RDKit::INT_VECT RDPickers::LeaderPicker::lazyPick(T&, unsigned int, unsigned int, const INT_VECT&, double, int) const [with T = pyobjFunctor]':
/<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/PickerHelpers.h:53:48: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
   53 |     return python::extract<double>(dp_obj(i, j));
      |                                                ^
/<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/PickerHelpers.h:53:48: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
   53 |     return python::extract<double>(dp_obj(i, j));
      |                                                ^
[ 12%] Building CXX object Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/rdSimDivPickers.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSimDivPickers_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdSimDivPickers.dir/rdSimDivPickers.cpp.o -c /<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap/rdSimDivPickers.cpp
make -f Code/Geometry/CMakeFiles/RDGeometryLib.dir/build.make Code/Geometry/CMakeFiles/RDGeometryLib.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/RDGeometryLib.dir/DependInfo.cmake --color=
Scanning dependencies of target RDGeometryLib
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Geometry/CMakeFiles/RDGeometryLib.dir/build.make Code/Geometry/CMakeFiles/RDGeometryLib.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 12%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/point.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++  -DRDGeometryLib_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/RDGeometryLib.dir/point.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/point.cpp
[ 12%] Linking CXX shared module ../../../rdkit/SimDivFilters/rdSimDivPickers.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdSimDivPickers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/SimDivFilters/rdSimDivPickers.so CMakeFiles/rdSimDivPickers.dir/MaxMinPicker.cpp.o CMakeFiles/rdSimDivPickers.dir/LeaderPicker.cpp.o CMakeFiles/rdSimDivPickers.dir/HierarchicalClusterPicker.cpp.o CMakeFiles/rdSimDivPickers.dir/rdSimDivPickers.cpp.o  ../../../lib/libRDKitSimDivPickers.so.1.2019.09.1 ../../../lib/libRDKithc.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 12%] Built target rdSimDivPickers
[ 13%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/Transform2D.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++  -DRDGeometryLib_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/RDGeometryLib.dir/Transform2D.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/Transform2D.cpp
make -f Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build.make Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ML/InfoTheory/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/DependInfo.cmake --color=
Scanning dependencies of target rdInfoTheory
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build.make Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 13%] Building CXX object Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/InfoBitRanker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdInfoTheory_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdInfoTheory.dir/InfoBitRanker.cpp.o -c /<<PKGBUILDDIR>>/Code/ML/InfoTheory/Wrap/InfoBitRanker.cpp
[ 13%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_SparseBV.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/cDataStructs.dir/wrap_SparseBV.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/wrap_SparseBV.cpp
[ 13%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/Transform3D.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++  -DRDGeometryLib_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/RDGeometryLib.dir/Transform3D.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/Transform3D.cpp
[ 13%] Building CXX object Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/BitCorrMatGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdInfoTheory_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdInfoTheory.dir/BitCorrMatGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/ML/InfoTheory/Wrap/BitCorrMatGenerator.cpp
[ 13%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/UniformGrid3D.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++  -DRDGeometryLib_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/RDGeometryLib.dir/UniformGrid3D.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/UniformGrid3D.cpp
[ 14%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_ExplicitBV.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/cDataStructs.dir/wrap_ExplicitBV.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/wrap_ExplicitBV.cpp
/<<PKGBUILDDIR>>/Code/Geometry/UniformGrid3D.cpp: In member function 'RDGeom::UniformGrid3D& RDGeom::UniformGrid3D::operator=(const RDGeom::UniformGrid3D&)':
/<<PKGBUILDDIR>>/Code/Geometry/UniformGrid3D.cpp:39:11: warning: control reaches end of non-void function [-Wreturn-type]
   39 |   initGrid(other.d_numX * other.d_spacing, other.d_numY * other.d_spacing,
      |   ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   40 |            other.d_numZ * other.d_spacing, other.d_spacing,
      |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   41 |            other.dp_storage->getValueType(), other.d_offSet, data);
      |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 14%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/GridUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++  -DRDGeometryLib_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/RDGeometryLib.dir/GridUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/GridUtils.cpp
[ 14%] Building CXX object Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/rdInfoTheory.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdInfoTheory_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdInfoTheory.dir/rdInfoTheory.cpp.o -c /<<PKGBUILDDIR>>/Code/ML/InfoTheory/Wrap/rdInfoTheory.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Geometry/GridUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/Geometry/GridUtils.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDGeom::Point3D&}; _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Geometry/GridUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/Geometry/GridUtils.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In function 'std::vector<RDGeom::Point3D> RDGeom::findGridTerminalPoints(const RDGeom::UniformGrid3D&, double, double)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 14%] Linking CXX shared library ../../lib/libRDKitRDGeometryLib.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/cmake -E cmake_link_script CMakeFiles/RDGeometryLib.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitRDGeometryLib.so.1 -o ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 CMakeFiles/RDGeometryLib.dir/point.cpp.o CMakeFiles/RDGeometryLib.dir/Transform2D.cpp.o CMakeFiles/RDGeometryLib.dir/Transform3D.cpp.o CMakeFiles/RDGeometryLib.dir/UniformGrid3D.cpp.o CMakeFiles/RDGeometryLib.dir/GridUtils.cpp.o  ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1 ../../lib/libRDKitRDGeometryLib.so
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[ 14%] Building CXX object Code/ML/Data/CMakeFiles/cQuantize.dir/cQuantize.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Data && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DcQuantize_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/cQuantize.dir/cQuantize.cpp.o -c /<<PKGBUILDDIR>>/Code/ML/Data/cQuantize.cpp
[ 14%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_BitOps.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/cDataStructs.dir/wrap_BitOps.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/wrap_BitOps.cpp
[ 14%] Linking CXX shared module ../../../../rdkit/ML/InfoTheory/rdInfoTheory.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdInfoTheory.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/ML/InfoTheory/rdInfoTheory.so CMakeFiles/rdInfoTheory.dir/InfoBitRanker.cpp.o CMakeFiles/rdInfoTheory.dir/BitCorrMatGenerator.cpp.o CMakeFiles/rdInfoTheory.dir/rdInfoTheory.cpp.o  ../../../../lib/libRDKitInfoTheory.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
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/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/ML/Data/cQuantize.so CMakeFiles/cQuantize.dir/cQuantize.cpp.o  ../../../lib/libRDKitInfoTheory.so.1.2019.09.1 ../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
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[ 16%] Linking CXX shared library ../../lib/libRDKitChemicalFeatures.so
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/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitChemicalFeatures.so.1 -o ../../lib/libRDKitChemicalFeatures.so.1.2019.09.1 CMakeFiles/ChemicalFeatures.dir/FreeChemicalFeature.cpp.o  ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitChemicalFeatures.so.1.2019.09.1 ../../lib/libRDKitChemicalFeatures.so.1 ../../lib/libRDKitChemicalFeatures.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 16%] Built target ChemicalFeatures
make -f Code/Geometry/CMakeFiles/geometryTestsCatch.dir/build.make Code/Geometry/CMakeFiles/geometryTestsCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/geometryTestsCatch.dir/DependInfo.cmake --color=
Scanning dependencies of target geometryTestsCatch
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Geometry/CMakeFiles/geometryTestsCatch.dir/build.make Code/Geometry/CMakeFiles/geometryTestsCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 16%] Building CXX object Code/Geometry/CMakeFiles/geometryTestsCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/geometryTestsCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/catch_tests.cpp
[ 16%] Linking CXX shared library ../../../lib/libRDKitAlignment.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment && /usr/bin/cmake -E cmake_link_script CMakeFiles/Alignment.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitAlignment.so.1 -o ../../../lib/libRDKitAlignment.so.1.2019.09.1 CMakeFiles/Alignment.dir/AlignPoints.cpp.o  ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1 ../../../lib/libRDKitAlignment.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 16%] Built target Alignment
make -f Code/Geometry/CMakeFiles/testGrid.dir/build.make Code/Geometry/CMakeFiles/testGrid.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/testGrid.dir/DependInfo.cmake --color=
Scanning dependencies of target testGrid
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Geometry/CMakeFiles/testGrid.dir/build.make Code/Geometry/CMakeFiles/testGrid.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 16%] Building CXX object Code/Geometry/CMakeFiles/testGrid.dir/testGrid.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testGrid.dir/testGrid.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/testGrid.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 16%] Linking CXX executable testGrid
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/cmake -E cmake_link_script CMakeFiles/testGrid.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testGrid.dir/testGrid.cpp.o  -o testGrid  ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 16%] Built target testGrid
make -f Code/Geometry/CMakeFiles/testTransforms.dir/build.make Code/Geometry/CMakeFiles/testTransforms.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/testTransforms.dir/DependInfo.cmake --color=
Scanning dependencies of target testTransforms
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Geometry/CMakeFiles/testTransforms.dir/build.make Code/Geometry/CMakeFiles/testTransforms.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 16%] Building CXX object Code/Geometry/CMakeFiles/testTransforms.dir/testTransforms.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testTransforms.dir/testTransforms.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/testTransforms.cpp
[ 16%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/QueryAtom.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/QueryAtom.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/QueryAtom.cpp
[ 17%] Linking CXX executable testTransforms
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/cmake -E cmake_link_script CMakeFiles/testTransforms.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testTransforms.dir/testTransforms.cpp.o  -o testTransforms  ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 17%] Built target testTransforms
make -f Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build.make Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Geometry/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/DependInfo.cmake --color=
Scanning dependencies of target rdGeometry
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build.make Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 17%] Building CXX object Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/Point.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdGeometry_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdGeometry.dir/Point.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/Wrap/Point.cpp
[ 17%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/QueryBond.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/QueryBond.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/QueryBond.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/Geometry/catch_tests.cpp:3:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/Geometry/catch_tests.cpp:3:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 17%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_FPB.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/cDataStructs.dir/wrap_FPB.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/wrap_FPB.cpp
[ 17%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Bond.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/Bond.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Bond.cpp
[ 17%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/MolOps.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/MolOps.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.cpp
[ 17%] Building CXX object Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/UniformGrid3D.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdGeometry_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdGeometry.dir/UniformGrid3D.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/Wrap/UniformGrid3D.cpp
[ 17%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_Utils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/cDataStructs.dir/wrap_Utils.cpp.o -c /<<PKGBUILDDIR>>/Code/DataStructs/Wrap/wrap_Utils.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
[ 17%] Linking CXX shared module ../../../rdkit/DataStructs/cDataStructs.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/cDataStructs.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/DataStructs/cDataStructs.so CMakeFiles/cDataStructs.dir/DataStructs.cpp.o CMakeFiles/cDataStructs.dir/DiscreteValueVect.cpp.o CMakeFiles/cDataStructs.dir/SparseIntVect.cpp.o CMakeFiles/cDataStructs.dir/wrap_SparseBV.cpp.o CMakeFiles/cDataStructs.dir/wrap_ExplicitBV.cpp.o CMakeFiles/cDataStructs.dir/wrap_BitOps.cpp.o CMakeFiles/cDataStructs.dir/wrap_FPB.cpp.o CMakeFiles/cDataStructs.dir/wrap_Utils.cpp.o  ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In function 'std::map<T, boost::shared_ptr<RDKit::ROMol> > RDKit::MolOps::getMolFragsWithQuery(const RDKit::ROMol&, T (*)(const RDKit::ROMol&, const RDKit::Atom*), bool, const std::vector<T>*, bool) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function 'std::map<T, boost::shared_ptr<RDKit::ROMol> > RDKit::MolOps::getMolFragsWithQuery(const RDKit::ROMol&, T (*)(const RDKit::ROMol&, const RDKit::Atom*), bool, const std::vector<T>*, bool) [with T = int]':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 17%] Built target cDataStructs
make -f Code/Numerics/CMakeFiles/testConrec.dir/build.make Code/Numerics/CMakeFiles/testConrec.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/CMakeFiles/testConrec.dir/DependInfo.cmake --color=
Scanning dependencies of target testConrec
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Numerics/CMakeFiles/testConrec.dir/build.make Code/Numerics/CMakeFiles/testConrec.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 17%] Building CXX object Code/Numerics/CMakeFiles/testConrec.dir/testConrec.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testConrec.dir/testConrec.cpp.o -c /<<PKGBUILDDIR>>/Code/Numerics/testConrec.cpp
/usr/include/c++/9/bits/stl_vector.h: In function 'std::map<T, boost::shared_ptr<RDKit::ROMol> > RDKit::MolOps::getMolFragsWithQuery(const RDKit::ROMol&, T (*)(const RDKit::ROMol&, const RDKit::Atom*), bool, const std::vector<T>*, bool) [with T = unsigned int]':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In function 'std::vector<boost::shared_ptr<RDKit::ROMol> > RDKit::MolOps::getMolFrags(const RDKit::ROMol&, bool, RDKit::INT_VECT*, RDKit::VECT_INT_VECT*, bool)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.cpp:11:
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 18%] Building CXX object Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/rdGeometry.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdGeometry_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdGeometry.dir/rdGeometry.cpp.o -c /<<PKGBUILDDIR>>/Code/Geometry/Wrap/rdGeometry.cpp
[ 18%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/FindRings.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/FindRings.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FindRings.cpp
/<<PKGBUILDDIR>>/Code/GraphMol/FindRings.cpp: In function 'int RDKit::MolOps::symmetrizeSSSR(RDKit::ROMol&, RDKit::VECT_INT_VECT&)':
/<<PKGBUILDDIR>>/Code/GraphMol/FindRings.cpp:1103:16: warning: variable 'nsssr' set but not used [-Wunused-but-set-variable]
 1103 |   unsigned int nsssr;
      |                ^~~~~
[ 18%] Linking CXX shared module ../../../rdkit/Geometry/rdGeometry.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdGeometry.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/Geometry/rdGeometry.so CMakeFiles/rdGeometry.dir/Point.cpp.o CMakeFiles/rdGeometry.dir/UniformGrid3D.cpp.o CMakeFiles/rdGeometry.dir/rdGeometry.cpp.o  ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 18%] Built target rdGeometry
make -f Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/Alignment /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/DependInfo.cmake --color=
Scanning dependencies of target testAlignment
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 18%] Building CXX object Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/testAlignment.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment && /usr/bin/c++  -DRDKIT_ALIGNMENT_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testAlignment.dir/testAlignment.cpp.o -c /<<PKGBUILDDIR>>/Code/Numerics/Alignment/testAlignment.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FindRings.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 18%] Linking CXX executable testAlignment
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment && /usr/bin/cmake -E cmake_link_script CMakeFiles/testAlignment.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testAlignment.dir/testAlignment.cpp.o  -o testAlignment  ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 18%] Built target testAlignment
[ 18%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/ROMol.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/ROMol.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.cpp
[ 19%] Linking CXX executable geometryTestsCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/cmake -E cmake_link_script CMakeFiles/geometryTestsCatch.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/geometryTestsCatch.dir/catch_tests.cpp.o  -o geometryTestsCatch  ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make -f Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build.make Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/Alignment/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/DependInfo.cmake --color=
Scanning dependencies of target rdAlignment
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build.make Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 20%] Building CXX object Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/rdAlignment.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdAlignment_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdAlignment.dir/rdAlignment.cpp.o -c /<<PKGBUILDDIR>>/Code/Numerics/Alignment/Wrap/rdAlignment.cpp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 20%] Built target geometryTestsCatch
[ 21%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/RWMol.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/RWMol.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/Numerics/testConrec.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/Numerics/testConrec.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.cpp:17:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.cpp:16:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.cpp:16:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.cpp:16:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/Numerics/Alignment/Wrap/rdAlignment.cpp:16:
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h: In member function 'T PySequenceHolder<T>::operator[](unsigned int) const [with T = double]':
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
   68 |       T res = python::extract<T>(d_seq[which]);
      |         ^~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::vector<std::__cxx11::basic_string<char> >]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.cpp:17:
/usr/include/c++/9/bits/stl_vector.h: In member function 'unsigned int RDKit::ROMol::addAtom(RDKit::Atom*, bool, bool)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.cpp:16:
/usr/include/c++/9/bits/stl_vector.h: In member function 'void RDKit::RWMol::insertMol(const RDKit::ROMol&)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 21%] Linking CXX shared module ../../../../rdkit/Numerics/rdAlignment.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdAlignment.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Numerics/rdAlignment.so CMakeFiles/rdAlignment.dir/rdAlignment.cpp.o  ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 21%] Built target rdAlignment
make -f Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/DependInfo.cmake --color=
Scanning dependencies of target testChemicalFeatures
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 21%] Building CXX object Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/testChemicalFeatures.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures && /usr/bin/c++  -DRDKIT_CHEMICALFEATURES_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testChemicalFeatures.dir/testChemicalFeatures.cpp.o -c /<<PKGBUILDDIR>>/Code/ChemicalFeatures/testChemicalFeatures.cpp
/usr/include/c++/9/bits/stl_vector.h: In member function 'unsigned int RDKit::RWMol::addAtom(bool)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 21%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/PeriodicTable.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/PeriodicTable.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/PeriodicTable.cpp
[ 21%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/atomic_data.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/atomic_data.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/atomic_data.cpp
[ 22%] Linking CXX executable testChemicalFeatures
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures && /usr/bin/cmake -E cmake_link_script CMakeFiles/testChemicalFeatures.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testChemicalFeatures.dir/testChemicalFeatures.cpp.o  -o testChemicalFeatures  ../../lib/libRDKitChemicalFeatures.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 22%] Built target testChemicalFeatures
[ 22%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/QueryOps.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/QueryOps.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/PeriodicTable.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/PeriodicTable.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDKit::atomicData&}; _Tp = RDKit::atomicData; _Alloc = std::allocator<RDKit::atomicData>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::atomicData>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::atomicData*, std::vector<RDKit::atomicData> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/PeriodicTable.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/PeriodicTable.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::PeriodicTable::PeriodicTable()':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::atomicData*, std::vector<RDKit::atomicData> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 22%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/MolPickler.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/MolPickler.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.cpp
[ 22%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Canon.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/Canon.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Canon.cpp
[ 23%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/AtomIterators.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/AtomIterators.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/AtomIterators.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Canon.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.cpp:10:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 23%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/BondIterators.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/BondIterators.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/BondIterators.cpp
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.cpp:10:
/usr/include/c++/9/bits/stl_vector.h: In static member function 'static void RDKit::MolPickler::_addAtomFromPickleV1(std::istream&, RDKit::ROMol*)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 23%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Aromaticity.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/Aromaticity.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Aromaticity.cpp
[ 23%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Kekulize.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/Kekulize.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Kekulize.cpp
[ 23%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/MolDiscriminators.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/MolDiscriminators.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDiscriminators.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Aromaticity.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 23%] Linking CXX executable testConrec
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics && /usr/bin/cmake -E cmake_link_script CMakeFiles/testConrec.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testConrec.dir/testConrec.cpp.o  -o testConrec  ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 23%] Built target testConrec
[ 23%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/ConjugHybrid.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/ConjugHybrid.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ConjugHybrid.cpp
[ 23%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/AddHs.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/AddHs.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/AddHs.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDiscriminators.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 24%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Matrices.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/Matrices.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Matrices.cpp
[ 24%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Chirality.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/Chirality.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Chirality.cpp
[ 24%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/RingInfo.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/RingInfo.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/RingInfo.cpp
[ 24%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Conformer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/Conformer.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Matrices.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/AddHs.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/AddHs.cpp:10:
/usr/include/c++/9/bits/stl_vector.h: In member function 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/AddHs.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 24%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Renumber.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/Renumber.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Renumber.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Chirality.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/AddHs.cpp:10:
/usr/include/c++/9/bits/stl_vector.h: In function 'void RDKit::{anonymous}::setHydrogenCoords(RDKit::ROMol*, unsigned int, unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 24%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/AdjustQuery.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/AdjustQuery.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/AdjustQuery.cpp
[ 25%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Resonance.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/Resonance.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Resonance.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Renumber.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Renumber.cpp:10:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Renumber.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Renumber.cpp:10:
/usr/include/c++/9/bits/stl_vector.h: In function 'RDKit::ROMol* RDKit::MolOps::renumberAtoms(const RDKit::ROMol&, const std::vector<unsigned int>&)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 25%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/StereoGroup.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/StereoGroup.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/StereoGroup.cpp
[ 25%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/new_canon.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/new_canon.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/new_canon.cpp
[ 25%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/SubstanceGroup.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/GraphMol.dir/SubstanceGroup.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Resonance.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In function 'void RDKit::ResonanceUtils::fixExplicitImplicitHs(RDKit::ROMol&)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::array<RDGeom::Point3D, 3>&}; _Tp = std::array<RDGeom::Point3D, 3>; _Alloc = std::allocator<std::array<RDGeom::Point3D, 3> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::array<RDGeom::Point3D, 3> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::array<RDGeom::Point3D, 3>*, std::vector<std::array<RDGeom::Point3D, 3> > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In member function 'void RDKit::SubstanceGroup::addBracket(const Bracket&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::array<RDGeom::Point3D, 3>*, std::vector<std::array<RDGeom::Point3D, 3> > >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::SubstanceGroup::CState}; _Tp = RDKit::SubstanceGroup::CState; _Alloc = std::allocator<RDKit::SubstanceGroup::CState>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::SubstanceGroup::CState>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::SubstanceGroup::CState*, std::vector<RDKit::SubstanceGroup::CState> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::SubstanceGroup::addCState(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::SubstanceGroup::CState*, std::vector<RDKit::SubstanceGroup::CState> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In constructor 'RDKit::SubstanceGroup::SubstanceGroup(RDKit::ROMol*, const string&)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 25%] Linking CXX shared library ../../lib/libRDKitGraphMol.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/GraphMol.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitGraphMol.so.1 -o ../../lib/libRDKitGraphMol.so.1.2019.09.1 CMakeFiles/GraphMol.dir/Atom.cpp.o CMakeFiles/GraphMol.dir/QueryAtom.cpp.o CMakeFiles/GraphMol.dir/QueryBond.cpp.o CMakeFiles/GraphMol.dir/Bond.cpp.o CMakeFiles/GraphMol.dir/MolOps.cpp.o CMakeFiles/GraphMol.dir/FindRings.cpp.o CMakeFiles/GraphMol.dir/ROMol.cpp.o CMakeFiles/GraphMol.dir/RWMol.cpp.o CMakeFiles/GraphMol.dir/PeriodicTable.cpp.o CMakeFiles/GraphMol.dir/atomic_data.cpp.o CMakeFiles/GraphMol.dir/QueryOps.cpp.o CMakeFiles/GraphMol.dir/MolPickler.cpp.o CMakeFiles/GraphMol.dir/Canon.cpp.o CMakeFiles/GraphMol.dir/AtomIterators.cpp.o CMakeFiles/GraphMol.dir/BondIterators.cpp.o CMakeFiles/GraphMol.dir/Aromaticity.cpp.o CMakeFiles/GraphMol.dir/Kekulize.cpp.o CMakeFiles/GraphMol.dir/MolDiscriminators.cpp.o CMakeFiles/GraphMol.dir/ConjugHybrid.cpp.o CMakeFiles/GraphMol.dir/AddHs.cpp.o CMakeFiles/GraphMol.dir/Matrices.cpp.o CMakeFiles/GraphMol.dir/Chirality.cpp.o CMakeFiles/GraphMol.dir/RingInfo.cpp.o CMakeFiles/GraphMol.dir/Conformer.cpp.o CMakeFiles/GraphMol.dir/Renumber.cpp.o CMakeFiles/GraphMol.dir/AdjustQuery.cpp.o CMakeFiles/GraphMol.dir/Resonance.cpp.o CMakeFiles/GraphMol.dir/StereoGroup.cpp.o CMakeFiles/GraphMol.dir/new_canon.cpp.o CMakeFiles/GraphMol.dir/SubstanceGroup.cpp.o  ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1 ../../lib/libRDKitGraphMol.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 25%] Built target GraphMol
make -f Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/depend
make -f Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/depend
make -f Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/depend
make -f Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/DependInfo.cmake --color=
Scanning dependencies of target Trajectory
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Scanning dependencies of target MolTransforms
Scanning dependencies of target SubstructMatch
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 26%] Building CXX object Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/Trajectory.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_TRAJECTORY_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DTrajectory_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Trajectory.dir/Trajectory.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Trajectory.cpp
Scanning dependencies of target SmilesParse
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/build
[ 26%] Building CXX object Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/MolTransforms.cpp.o
[ 26%] Building CXX object Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/SubstructMatch.cpp.o
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBSTRUCTMATCH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubstructMatch_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SubstructMatch.dir/SubstructMatch.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms && /usr/bin/c++  -DMolTransforms_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLTRANSFORMS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolTransforms.dir/MolTransforms.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/MolTransforms.cpp
[ 26%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmilesParse.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SmilesParse.dir/SmilesParse.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesParse.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Trajectory.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Trajectory.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Trajectory.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDKit::Snapshot&}; _Tp = RDKit::Snapshot; _Alloc = std::allocator<RDKit::Snapshot>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Snapshot>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(std::vector<_Tp, _Alloc>::const_iterator, const value_type&) [with _Tp = RDKit::Snapshot; _Alloc = std::allocator<RDKit::Snapshot>]':
/usr/include/c++/9/bits/vector.tcc:130:5: note: parameter passing for argument of type 'std::vector<RDKit::Snapshot>::const_iterator' {aka '__gnu_cxx::__normal_iterator<const RDKit::Snapshot*, std::vector<RDKit::Snapshot> >'} changed in GCC 7.1
  130 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:161:2: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
  161 |  _M_realloc_insert(begin() + (__position - cbegin()), __x);
      |  ^~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Trajectory.cpp: In member function 'unsigned int RDKit::Trajectory::insertSnapshot(unsigned int, RDKit::Snapshot)':
/<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Trajectory.cpp:73:74: note: parameter passing for argument of type 'std::vector<RDKit::Snapshot>::const_iterator' {aka '__gnu_cxx::__normal_iterator<const RDKit::Snapshot*, std::vector<RDKit::Snapshot> >'} changed in GCC 7.1
   73 |   return (d_snapshotVect->insert(d_snapshotVect->begin() + snapshotNum, s) -
      |                                                                          ^
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Trajectory.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In member function 'unsigned int RDKit::Trajectory::addConformersToMol(RDKit::ROMol&, int, int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesParse.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesParse.cpp:26:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 26%] Linking CXX shared library ../../../lib/libRDKitTrajectory.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory && /usr/bin/cmake -E cmake_link_script CMakeFiles/Trajectory.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitTrajectory.so.1 -o ../../../lib/libRDKitTrajectory.so.1.2019.09.1 CMakeFiles/Trajectory.dir/Trajectory.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1 ../../../lib/libRDKitTrajectory.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 26%] Built target Trajectory
[ 26%] Building CXX object Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/SubstructUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBSTRUCTMATCH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubstructMatch_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SubstructMatch.dir/SubstructUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructUtils.cpp
[ 26%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmilesParseOps.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SmilesParse.dir/SmilesParseOps.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesParseOps.cpp
[ 26%] Linking CXX shared library ../../../lib/libRDKitMolTransforms.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolTransforms.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitMolTransforms.so.1 -o ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 CMakeFiles/MolTransforms.dir/MolTransforms.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1 ../../../lib/libRDKitMolTransforms.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 26%] Built target MolTransforms
make -f Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/DependInfo.cmake --color=
Scanning dependencies of target Subgraphs
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 26%] Building CXX object Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/Subgraphs.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBGRAPHS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubgraphs_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Subgraphs.dir/Subgraphs.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/Subgraphs.cpp
make -f Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/DependInfo.cmake --color=
Scanning dependencies of target PartialCharges
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 26%] Building CXX object Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/GasteigerCharges.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges && /usr/bin/c++  -DPartialCharges_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_PARTIALCHARGES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/PartialCharges.dir/GasteigerCharges.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerCharges.cpp
[ 26%] Linking CXX shared library ../../../lib/libRDKitSubstructMatch.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/cmake -E cmake_link_script CMakeFiles/SubstructMatch.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitSubstructMatch.so.1 -o ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 CMakeFiles/SubstructMatch.dir/SubstructMatch.cpp.o CMakeFiles/SubstructMatch.dir/SubstructUtils.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1 ../../../lib/libRDKitSubstructMatch.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 26%] Built target SubstructMatch
[ 27%] Building CXX object Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/SubgraphUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBGRAPHS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubgraphs_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Subgraphs.dir/SubgraphUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/SubgraphUtils.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesParseOps.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 28%] Building CXX object Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/GasteigerParams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges && /usr/bin/c++  -DPartialCharges_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_PARTIALCHARGES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/PartialCharges.dir/GasteigerParams.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerParams.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerCharges.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerCharges.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerCharges.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerCharges.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In function 'void RDKit::computeGasteigerCharges(const RDKit::ROMol&, std::vector<double>&, int, bool)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 28%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmilesWrite.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SmilesParse.dir/SmilesWrite.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesWrite.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/Subgraphs.h:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/SubgraphUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/SubgraphUtils.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/Subgraphs.h:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/SubgraphUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/SubgraphUtils.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function 'RDKit::ROMol* RDKit::Subgraphs::pathToSubmol(const RDKit::ROMol&, const PATH_TYPE&, bool, RDKit::INT_MAP_INT&)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 29%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmartsWrite.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SmilesParse.dir/SmartsWrite.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmartsWrite.cpp
[ 29%] Linking CXX shared library ../../../lib/libRDKitSubgraphs.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/cmake -E cmake_link_script CMakeFiles/Subgraphs.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitSubgraphs.so.1 -o ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 CMakeFiles/Subgraphs.dir/Subgraphs.cpp.o CMakeFiles/Subgraphs.dir/SubgraphUtils.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1 ../../../lib/libRDKitSubgraphs.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 29%] Built target Subgraphs
make -f Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build.make Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMolTransforms
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build.make Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 29%] Building CXX object Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/rdMolTransforms.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolTransforms_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMolTransforms.dir/rdMolTransforms.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/Wrap/rdMolTransforms.cpp
[ 29%] Linking CXX shared library ../../../lib/libRDKitPartialCharges.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges && /usr/bin/cmake -E cmake_link_script CMakeFiles/PartialCharges.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitPartialCharges.so.1 -o ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 CMakeFiles/PartialCharges.dir/GasteigerCharges.cpp.o CMakeFiles/PartialCharges.dir/GasteigerParams.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1 ../../../lib/libRDKitPartialCharges.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 29%] Built target PartialCharges
make -f Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/DependInfo.cmake --color=
Scanning dependencies of target ShapeHelpers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 29%] Building CXX object Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/ShapeEncoder.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SHAPEHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DShapeHelpers_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ShapeHelpers.dir/ShapeEncoder.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/ShapeEncoder.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesWrite.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesWrite.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 29%] Building CXX object Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/ShapeUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SHAPEHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DShapeHelpers_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ShapeHelpers.dir/ShapeUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/ShapeUtils.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmartsWrite.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmartsWrite.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In function 'std::string RDKit::{anonymous}::getAtomSmartsSimple(const RDKit::QueryAtom*, const ATOM_EQUALS_QUERY*, bool&)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In function 'std::string RDKit::SmartsWrite::GetAtomSmarts(const RDKit::QueryAtom*)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In function 'std::string RDKit::{anonymous}::molToSmarts(const RDKit::ROMol&, bool, std::vector<RDKit::Canon::AtomColors>&&, const boost::dynamic_bitset<>*)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 29%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/CXSmilesOps.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SmilesParse.dir/CXSmilesOps.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/CXSmilesOps.cpp
[ 29%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/smarts.tab.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SmilesParse.dir/smarts.tab.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/smarts.tab.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/ShapeUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/ShapeUtils.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/ShapeUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/ShapeUtils.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In function 'std::vector<double> RDKit::MolShapes::getConfDimensions(const RDKit::Conformer&, double, const RDGeom::Point3D*, bool)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 29%] Linking CXX shared library ../../../lib/libRDKitShapeHelpers.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/ShapeHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitShapeHelpers.so.1 -o ../../../lib/libRDKitShapeHelpers.so.1.2019.09.1 CMakeFiles/ShapeHelpers.dir/ShapeEncoder.cpp.o CMakeFiles/ShapeHelpers.dir/ShapeUtils.cpp.o  ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitShapeHelpers.so.1.2019.09.1 ../../../lib/libRDKitShapeHelpers.so.1 ../../../lib/libRDKitShapeHelpers.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 29%] Built target ShapeHelpers
make -f Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/DependInfo.cmake --color=
Scanning dependencies of target MolCatalog
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 29%] Building CXX object Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/MolCatalogEntry.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog && /usr/bin/c++  -DMolCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolCatalog.dir/MolCatalogEntry.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/MolCatalogEntry.cpp
[ 29%] Linking CXX shared module ../../../../rdkit/Chem/rdMolTransforms.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolTransforms.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdMolTransforms.so CMakeFiles/rdMolTransforms.dir/rdMolTransforms.cpp.o  ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 29%] Built target rdMolTransforms
[ 30%] Building CXX object Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/MolCatalogParams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog && /usr/bin/c++  -DMolCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolCatalog.dir/MolCatalogParams.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/MolCatalogParams.cpp
[ 30%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/smiles.tab.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SmilesParse.dir/smiles.tab.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/smiles.tab.cpp
In file included from /usr/include/c++/9/vector:72,
                 from smarts.yy:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function.hpp:30,
                 from /usr/include/boost/algorithm/string/detail/find_iterator.hpp:18,
                 from /usr/include/boost/algorithm/string/find_iterator.hpp:24,
                 from /usr/include/boost/algorithm/string/iter_find.hpp:27,
                 from /usr/include/boost/algorithm/string/split.hpp:16,
                 from /usr/include/boost/algorithm/string.hpp:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/CXSmilesOps.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function.hpp:30,
                 from /usr/include/boost/algorithm/string/detail/find_iterator.hpp:18,
                 from /usr/include/boost/algorithm/string/find_iterator.hpp:24,
                 from /usr/include/boost/algorithm/string/iter_find.hpp:27,
                 from /usr/include/boost/algorithm/string/split.hpp:16,
                 from /usr/include/boost/algorithm/string.hpp:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/CXSmilesOps.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function.hpp:30,
                 from /usr/include/boost/algorithm/string/detail/find_iterator.hpp:18,
                 from /usr/include/boost/algorithm/string/find_iterator.hpp:24,
                 from /usr/include/boost/algorithm/string/iter_find.hpp:27,
                 from /usr/include/boost/algorithm/string/split.hpp:16,
                 from /usr/include/boost/algorithm/string.hpp:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/CXSmilesOps.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 30%] Linking CXX shared library ../../../lib/libRDKitMolCatalog.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolCatalog.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitMolCatalog.so.1 -o ../../../lib/libRDKitMolCatalog.so.1.2019.09.1 CMakeFiles/MolCatalog.dir/MolCatalogEntry.cpp.o CMakeFiles/MolCatalog.dir/MolCatalogParams.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolCatalog.so.1.2019.09.1 ../../../lib/libRDKitMolCatalog.so.1 ../../../lib/libRDKitMolCatalog.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 30%] Built target MolCatalog
make -f Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/DependInfo.cmake --color=
Scanning dependencies of target MolInterchange
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 30%] Building CXX object Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/Parser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange && /usr/bin/c++  -DMolInterchange_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLINTERCHANGE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/rapidjson -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolInterchange.dir/Parser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/Parser.cpp
In file included from /usr/include/c++/9/vector:72,
                 from smiles.yy:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 30%] Building CXX object Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/Writer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange && /usr/bin/c++  -DMolInterchange_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLINTERCHANGE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/rapidjson -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolInterchange.dir/Writer.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/Writer.cpp
[ 30%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/lex.yysmarts.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SmilesParse.dir/lex.yysmarts.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/lex.yysmarts.cpp
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function.hpp:30,
                 from /usr/include/boost/algorithm/string/detail/find_iterator.hpp:18,
                 from /usr/include/boost/algorithm/string/find_iterator.hpp:24,
                 from /usr/include/boost/algorithm/string/iter_find.hpp:27,
                 from /usr/include/boost/algorithm/string/split.hpp:16,
                 from /usr/include/boost/algorithm/string.hpp:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/CXSmilesOps.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In function 'bool SmilesParseOps::parser::parse_coords(Iterator&, Iterator, RDKit::RWMol&) [with Iterator = __gnu_cxx::__normal_iterator<const char*, std::__cxx11::basic_string<char> >]':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
make -f Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/DependInfo.cmake --color=
Scanning dependencies of target SLNParse
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 30%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/SLNParse.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SLNPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSLNParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SLNParse.dir/SLNParse.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNParse.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/Parser.cpp:16:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/Parser.cpp:16:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/Parser.cpp:16:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/Parser.cpp:16:
/usr/include/c++/9/bits/stl_vector.h: In function 'void RDKit::MolInterchange::{anonymous}::readConformer(RDKit::Conformer*, const Value&)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 30%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/lex.yysmiles.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SmilesParse.dir/lex.yysmiles.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/lex.yysmiles.cpp
make -f Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/DependInfo.cmake --color=
Scanning dependencies of target rdqueries
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 30%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/rdqueries.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdqueries_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdqueries.dir/rdqueries.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/rdqueries.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNParse.cpp:35:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In function 'void RDKit::SLNParse::finalizeQueryMol(RDKit::ROMol*, bool)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 30%] Linking CXX shared library ../../../lib/libRDKitMolInterchange.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolInterchange.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitMolInterchange.so.1 -o ../../../lib/libRDKitMolInterchange.so.1.2019.09.1 CMakeFiles/MolInterchange.dir/Parser.cpp.o CMakeFiles/MolInterchange.dir/Writer.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolInterchange.so.1.2019.09.1 ../../../lib/libRDKitMolInterchange.so.1 ../../../lib/libRDKitMolInterchange.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 30%] Built target MolInterchange
[ 30%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/SLNAttribs.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SLNPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSLNParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SLNParse.dir/SLNAttribs.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNAttribs.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from smiles.ll:25:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 31%] Linking CXX shared library ../../../lib/libRDKitSmilesParse.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/SmilesParse.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitSmilesParse.so.1 -o ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 CMakeFiles/SmilesParse.dir/SmilesParse.cpp.o CMakeFiles/SmilesParse.dir/SmilesParseOps.cpp.o CMakeFiles/SmilesParse.dir/SmilesWrite.cpp.o CMakeFiles/SmilesParse.dir/SmartsWrite.cpp.o CMakeFiles/SmilesParse.dir/CXSmilesOps.cpp.o CMakeFiles/SmilesParse.dir/smarts.tab.cpp.o CMakeFiles/SmilesParse.dir/smiles.tab.cpp.o CMakeFiles/SmilesParse.dir/lex.yysmarts.cpp.o CMakeFiles/SmilesParse.dir/lex.yysmiles.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1 ../../../lib/libRDKitSmilesParse.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 31%] Built target SmilesParse
[ 32%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/sln.tab.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SLNPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSLNParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SLNParse.dir/sln.tab.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/sln.tab.cpp
[ 32%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/Queries.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdqueries_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdqueries.dir/Queries.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Queries.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNAttribs.h:39,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNAttribs.cpp:37:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
make -f Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/DependInfo.cmake --color=
Scanning dependencies of target rdtrajectory
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 32%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/Trajectory.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdtrajectory_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdtrajectory.dir/Trajectory.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Trajectory.cpp
make -f Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build.make Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ChemicalFeatures/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/DependInfo.cmake --color=
Scanning dependencies of target rdChemicalFeatures
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build.make Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 33%] Building CXX object Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/rdChemicalFeatures.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdChemicalFeatures_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdChemicalFeatures.dir/rdChemicalFeatures.cpp.o -c /<<PKGBUILDDIR>>/Code/ChemicalFeatures/Wrap/rdChemicalFeatures.cpp
In file included from /usr/include/c++/9/vector:72,
                 from sln.yy:41:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 33%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/lex.yysln.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SLNPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSLNParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SLNParse.dir/lex.yysln.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/lex.yysln.cpp
[ 33%] Building CXX object Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/FreeChemicalFeature.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdChemicalFeatures_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdChemicalFeatures.dir/FreeChemicalFeature.cpp.o -c /<<PKGBUILDDIR>>/Code/ChemicalFeatures/Wrap/FreeChemicalFeature.cpp
[ 33%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/rdTrajectory.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdtrajectory_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdtrajectory.dir/rdTrajectory.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/rdTrajectory.cpp
[ 33%] Linking CXX shared library ../../../lib/libRDKitSLNParse.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/SLNParse.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitSLNParse.so.1 -o ../../../lib/libRDKitSLNParse.so.1.2019.09.1 CMakeFiles/SLNParse.dir/SLNParse.cpp.o CMakeFiles/SLNParse.dir/SLNAttribs.cpp.o CMakeFiles/SLNParse.dir/sln.tab.cpp.o CMakeFiles/SLNParse.dir/lex.yysln.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitSLNParse.so.1.2019.09.1 ../../../lib/libRDKitSLNParse.so.1 ../../../lib/libRDKitSLNParse.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 33%] Built target SLNParse
make -f Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/Optimizer /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/DependInfo.cmake --color=
Scanning dependencies of target Optimizer
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 33%] Building CXX object Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/BFGSOpt.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer && /usr/bin/c++  -DOptimizer_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_OPTIMIZER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Optimizer.dir/BFGSOpt.cpp.o -c /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/BFGSOpt.cpp
[ 34%] Linking CXX shared module ../../../rdkit/Chem/rdtrajectory.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdtrajectory.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/Chem/rdtrajectory.so CMakeFiles/rdtrajectory.dir/Trajectory.cpp.o CMakeFiles/rdtrajectory.dir/rdTrajectory.cpp.o  ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitRDBoost.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
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[ 34%] Built target rdtrajectory
[ 34%] Building CXX object Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/LinearSearch.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer && /usr/bin/c++  -DOptimizer_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_OPTIMIZER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Optimizer.dir/LinearSearch.cpp.o -c /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/LinearSearch.cpp
[ 34%] Linking CXX shared module ../../../rdkit/Chem/rdqueries.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdqueries.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/Chem/rdqueries.so CMakeFiles/rdqueries.dir/rdqueries.cpp.o CMakeFiles/rdqueries.dir/Queries.cpp.o  ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
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[ 34%] Built target rdqueries
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/DependInfo.cmake --color=
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[ 34%] Building CXX object Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/catch_sgroups.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/graphmolSGroupCatch.dir/catch_sgroups.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/catch_sgroups.cpp
make -f Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/depend
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/DependInfo.cmake --color=
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[ 34%] Building CXX object Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/querytest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/graphmolqueryTest.dir/querytest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/querytest.cpp
[ 34%] Linking CXX shared library ../../../lib/libRDKitOptimizer.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer && /usr/bin/cmake -E cmake_link_script CMakeFiles/Optimizer.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitOptimizer.so.1 -o ../../../lib/libRDKitOptimizer.so.1.2019.09.1 CMakeFiles/Optimizer.dir/BFGSOpt.cpp.o CMakeFiles/Optimizer.dir/LinearSearch.cpp.o  ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1 ../../../lib/libRDKitOptimizer.so
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[ 34%] Built target Optimizer
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolcpTest.dir/DependInfo.cmake --color=
Scanning dependencies of target graphmolcpTest
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[ 35%] Building CXX object Code/GraphMol/CMakeFiles/graphmolcpTest.dir/cptest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/graphmolcpTest.dir/cptest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/cptest.cpp
[ 35%] Linking CXX shared module ../../../rdkit/Chem/rdChemicalFeatures.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdChemicalFeatures.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/Chem/rdChemicalFeatures.so CMakeFiles/rdChemicalFeatures.dir/rdChemicalFeatures.cpp.o CMakeFiles/rdChemicalFeatures.dir/FreeChemicalFeature.cpp.o  ../../../lib/libRDKitChemicalFeatures.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Built target rdChemicalFeatures
make -f Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/DependInfo.cmake --color=
Scanning dependencies of target graphmolMemTest1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Building CXX object Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/memtest1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/graphmolMemTest1.dir/memtest1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/memtest1.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/cptest.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/cptest.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/querytest.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/memtest1.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 35%] Linking CXX executable graphmolcpTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolcpTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/graphmolcpTest.dir/cptest.cpp.o  -o graphmolcpTest  ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Built target graphmolcpTest
make -f Code/GraphMol/CMakeFiles/test-valgrind.dir/build.make Code/GraphMol/CMakeFiles/test-valgrind.dir/depend
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/test-valgrind.dir/DependInfo.cmake --color=
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Building CXX object Code/GraphMol/CMakeFiles/test-valgrind.dir/test-valgrind.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/test-valgrind.dir/test-valgrind.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/test-valgrind.cpp
[ 35%] Linking CXX executable graphmolMemTest1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolMemTest1.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/graphmolMemTest1.dir/memtest1.cpp.o  -o graphmolMemTest1  ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Built target graphmolMemTest1
make -f Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolIterTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolIterTest.dir/DependInfo.cmake --color=
Scanning dependencies of target graphmolIterTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Building CXX object Code/GraphMol/CMakeFiles/graphmolIterTest.dir/itertest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/graphmolIterTest.dir/itertest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/itertest.cpp
[ 35%] Linking CXX executable graphmolqueryTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolqueryTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/graphmolqueryTest.dir/querytest.cpp.o  -o graphmolqueryTest  ../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Built target graphmolqueryTest
make -f Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/DependInfo.cmake --color=
Scanning dependencies of target ChemTransforms
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Building CXX object Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/ChemTransforms.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/c++  -DChemTransforms_EXPORTS -DRDKIT_CHEMTRANSFORMS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ChemTransforms.dir/ChemTransforms.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/ChemTransforms.cpp
[ 35%] Linking CXX executable test-valgrind
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-valgrind.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/test-valgrind.dir/test-valgrind.cpp.o  -o test-valgrind  ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Built target test-valgrind
make -f Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/DependInfo.cmake --color=
Scanning dependencies of target smaTest1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/smatest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/smaTest1.dir/smatest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/smatest.cpp
[ 35%] Linking CXX executable graphmolIterTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolIterTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/graphmolIterTest.dir/itertest.cpp.o  -o graphmolIterTest  ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Built target graphmolIterTest
[ 35%] Building CXX object Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/MolFragmenter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/c++  -DChemTransforms_EXPORTS -DRDKIT_CHEMTRANSFORMS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ChemTransforms.dir/MolFragmenter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/MolFragmenter.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/catch_sgroups.cpp:14:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/catch_sgroups.cpp:14:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/ChemTransforms.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/ChemTransforms.cpp:10:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function 'void RDKit::{anonymous}::updateSubMolConfs(const RDKit::ROMol&, RDKit::RWMol&, boost::dynamic_bitset<>&)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function 'RDKit::ROMol* RDKit::combineMols(const RDKit::ROMol&, const RDKit::ROMol&, RDGeom::Point3D)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/catch_sgroups.cpp:14:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function 'RDKit::ROMol* RDKit::replaceCore(const RDKit::ROMol&, const RDKit::ROMol&, const MatchVectType&, bool, bool, bool)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/MolFragmenter.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/MolFragmenter.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/DependInfo.cmake --color=
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
Scanning dependencies of target smiTest2
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/test2.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/smiTest2.dir/test2.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/test2.cpp
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/MolFragmenter.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/MolFragmenter.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In function 'RDKit::ROMol* RDKit::MolFragmenter::fragmentOnBonds(const RDKit::ROMol&, const std::vector<unsigned int>&, bool, const std::vector<std::pair<unsigned int, unsigned int> >*, const std::vector<RDKit::Bond::BondType>*, std::vector<unsigned int>*)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 35%] Linking CXX shared library ../../../lib/libRDKitChemTransforms.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/cmake -E cmake_link_script CMakeFiles/ChemTransforms.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitChemTransforms.so.1 -o ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 CMakeFiles/ChemTransforms.dir/ChemTransforms.cpp.o CMakeFiles/ChemTransforms.dir/MolFragmenter.cpp.o  ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1 ../../../lib/libRDKitChemTransforms.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Built target ChemTransforms
make -f Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/DependInfo.cmake --color=
Scanning dependencies of target FilterCatalog
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/Filters.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++  -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FilterCatalog.dir/Filters.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Filters.cpp
[ 35%] Linking CXX executable smiTest2
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/smiTest2.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/smiTest2.dir/test2.cpp.o  -o smiTest2  ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Built target smiTest2
make -f Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/DependInfo.cmake --color=
Scanning dependencies of target Fingerprints
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/Fingerprints.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Fingerprints.dir/Fingerprints.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.cpp
[ 35%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FilterCatalog.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++  -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FilterCatalog.dir/FilterCatalog.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalog.cpp
In file included from /usr/include/c++/9/algorithm:62,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:17,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.cpp:11:
/usr/include/c++/9/bits/stl_algo.h: In function '_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const unsigned int>]':
/usr/include/c++/9/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  112 |     __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last,
      |     ^~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/set:60,
                 from /<<PKGBUILDDIR>>/Code/Query/SetQuery.h:13,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.cpp:11:
/usr/include/c++/9/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<long long unsigned int&&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::vector<std::vector<int> > >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<std::vector<int> > >, std::_Select1st<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<std::vector<int> > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:17,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:21,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.cpp:11:
/usr/include/c++/9/bits/stl_algo.h: In function 'RDKit::SparseIntVect<long long unsigned int>* RDKit::getUnfoldedRDKFingerprintMol(const RDKit::ROMol&, unsigned int, unsigned int, bool, bool, bool, std::vector<unsigned int>*, const std::vector<unsigned int>*, std::vector<std::vector<long long unsigned int> >*, std::map<long long unsigned int, std::vector<std::vector<int> > >*)':
/usr/include/c++/9/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  161 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
  162 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.cpp:11:
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:26,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.cpp:11:
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<std::vector<int> > >, std::_Select1st<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<std::vector<int> > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.cpp:812:1: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
  812 | }
      | ^
[ 35%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/PatternFingerprints.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Fingerprints.dir/PatternFingerprints.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/PatternFingerprints.cpp
[ 36%] Linking CXX executable smaTest1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/smaTest1.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/smaTest1.dir/smatest.cpp.o  -o smaTest1  ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 36%] Built target smaTest1
make -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/DependInfo.cmake --color=
Scanning dependencies of target testSubgraphs2
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 37%] Building CXX object Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/test2.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBGRAPHS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testSubgraphs2.dir/test2.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/test2.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.h:18,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalog.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalog.cpp:32:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void boost::archive::detail::iserializer<Archive, T>::load_object_data(boost::archive::detail::basic_iarchive&, void*, unsigned int) const [with Archive = boost::archive::text_iarchive; T = RDKit::FilterCatalogEntry]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 37%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/MorganFingerprints.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Fingerprints.dir/MorganFingerprints.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganFingerprints.cpp
[ 37%] Linking CXX executable graphmolSGroupCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolSGroupCatch.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/graphmolSGroupCatch.dir/catch_sgroups.cpp.o  -o graphmolSGroupCatch  ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 37%] Built target graphmolSGroupCatch
[ 38%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/AtomPairs.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Fingerprints.dir/AtomPairs.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairs.cpp
[ 38%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FilterCatalogEntry.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++  -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FilterCatalog.dir/FilterCatalogEntry.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalogEntry.cpp
[ 38%] Linking CXX executable testSubgraphs2
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSubgraphs2.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testSubgraphs2.dir/test2.cpp.o  -o testSubgraphs2  ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 38%] Built target testSubgraphs2
[ 38%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/MACCS.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Fingerprints.dir/MACCS.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MACCS.cpp
In file included from /usr/include/c++/9/set:60,
                 from /<<PKGBUILDDIR>>/Code/Query/SetQuery.h:13,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairs.cpp:11:
/usr/include/c++/9/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long int&>, std::tuple<>}; _Key = long long int; _Val = std::pair<const long long int, int>; _KeyOfValue = std::_Select1st<std::pair<const long long int, int> >; _Compare = std::less<long long int>; _Alloc = std::allocator<std::pair<const long long int, int> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<long long int, std::pair<const long long int, int>, std::_Select1st<std::pair<const long long int, int> >, std::less<long long int>, std::allocator<std::pair<const long long int, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long int, int> >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:26,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairs.cpp:11:
/usr/include/c++/9/bits/stl_map.h: In function 'RDKit::SparseIntVect<long long int>* RDKit::AtomPairs::getTopologicalTorsionFingerprint(const RDKit::ROMol&, unsigned int, const std::vector<unsigned int>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, bool)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<long long int, std::pair<const long long int, int>, std::_Select1st<std::pair<const long long int, int> >, std::less<long long int>, std::allocator<std::pair<const long long int, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long int, int> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In function 'void RDKit::AtomPairs::{anonymous}::TorsionFpCalc(T*, const RDKit::ROMol&, unsigned int, unsigned int, const std::vector<unsigned int>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, bool) [with T = RDKit::SparseIntVect<long long int>]':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<long long int, std::pair<const long long int, int>, std::_Select1st<std::pair<const long long int, int> >, std::less<long long int>, std::allocator<std::pair<const long long int, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long int, int> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
make -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/DependInfo.cmake --color=
Scanning dependencies of target testSubgraphs1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 38%] Building CXX object Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBGRAPHS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testSubgraphs1.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs/test1.cpp
make -f Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/DependInfo.cmake --color=
Scanning dependencies of target FragCatalog
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 39%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatalogUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/c++  -DFragCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FragCatalog.dir/FragCatalogUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatalogUtils.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalogEntry.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Filters.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalogEntry.cpp:32:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 39%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/FingerprintGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Fingerprints.dir/FingerprintGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatalogUtils.cpp:14:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
[ 40%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FilterCatalogRunner.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++  -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FilterCatalog.dir/FilterCatalogRunner.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalogRunner.cpp
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 40%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/c++  -DFragCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FragCatalog.dir/FragCatGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatGenerator.cpp
[ 40%] Linking CXX executable testSubgraphs1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSubgraphs1.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testSubgraphs1.dir/test1.cpp.o  -o testSubgraphs1  ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 40%] Built target testSubgraphs1
[ 40%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FilterMatchers.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++  -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FilterCatalog.dir/FilterMatchers.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.cpp
In file included from /usr/include/c++/9/map:60,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/SparseIntVect.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp:11:
/usr/include/c++/9/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, int>; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, int> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, int> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, int>, std::_Select1st<std::pair<const long long unsigned int, int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, int> >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /<<PKGBUILDDIR>>/Code/DataStructs/SparseIntVect.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp:11:
/usr/include/c++/9/bits/stl_map.h: In member function 'RDKit::SparseIntVect<IndexType>* RDKit::FingerprintGenerator<OutputType>::getFingerprintHelper(const RDKit::ROMol&, const std::vector<unsigned int>*, const std::vector<unsigned int>*, int, const RDKit::AdditionalOutput*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, uint64_t) const [with OutputType = long long unsigned int]':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, int>, std::_Select1st<std::pair<const long long unsigned int, int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, int> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, int>, std::_Select1st<std::pair<const long long unsigned int, int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, int> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.h:18,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
[ 40%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/AtomPairGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Fingerprints.dir/AtomPairGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp
In file included from /usr/include/c++/9/set:60,
                 from /usr/include/boost/graph/adjacency_list.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.h:18,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:11:
/usr/include/c++/9/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const double&>, std::tuple<>}; _Key = double; _Val = std::pair<const double, int>; _KeyOfValue = std::_Select1st<std::pair<const double, int> >; _Compare = RDKit::ltDouble; _Alloc = std::allocator<std::pair<const double, int> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/functional/hash.hpp:6,
                 from /usr/include/boost/unordered/unordered_set.hpp:18,
                 from /usr/include/boost/unordered_set.hpp:17,
                 from /usr/include/boost/graph/adjacency_list.hpp:21,
                 from /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.h:18,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:11:
/usr/include/c++/9/bits/stl_map.h: In function 'unsigned int RDKit::addOrder1Paths(RDKit::PATH_LIST&, const RDKit::ROMol&, RDKit::FragCatalog*, RDKit::DOUBLE_INT_MAP&, const MatchVectType&)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 40%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/MorganGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Fingerprints.dir/MorganGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.cpp
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.h:18,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In function 'unsigned int RDKit::addHigherOrderPaths(const INT_PATH_LIST_MAP&, const RDKit::ROMol&, RDKit::FragCatalog*, RDKit::DOUBLE_INT_MAP&, const MatchVectType&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/functional/hash.hpp:6,
                 from /usr/include/boost/unordered/unordered_set.hpp:18,
                 from /usr/include/boost/unordered_set.hpp:17,
                 from /usr/include/boost/graph/adjacency_list.hpp:21,
                 from /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.h:18,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:11:
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 40%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatalogEntry.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/c++  -DFragCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FragCatalog.dir/FragCatalogEntry.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatalogEntry.cpp
[ 40%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FunctionalGroupHierarchy.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++  -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FilterCatalog.dir/FunctionalGroupHierarchy.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FunctionalGroupHierarchy.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
make -f Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/DependInfo.cmake --color=
Scanning dependencies of target testPartialCharges
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 40%] Building CXX object Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_PARTIALCHARGES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testPartialCharges.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/test1.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatParams.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatalogEntry.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatalogEntry.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 40%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/RDKitFPGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Fingerprints.dir/RDKitFPGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp
[ 40%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatParams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/c++  -DFragCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FragCatalog.dir/FragCatParams.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatParams.cpp
[ 40%] Linking CXX executable testPartialCharges
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges && /usr/bin/cmake -E cmake_link_script CMakeFiles/testPartialCharges.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testPartialCharges.dir/test1.cpp.o  -o testPartialCharges  ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 40%] Built target testPartialCharges
[ 41%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/FingerprintUtil.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Fingerprints.dir/FingerprintUtil.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintUtil.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.h:18,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalog.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FunctionalGroupHierarchy.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FunctionalGroupHierarchy.cpp:33:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In function 'void RDKit::{anonymous}::hierarchy_create()':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 41%] Linking CXX shared library ../../../lib/libRDKitFilterCatalog.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/FilterCatalog.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitFilterCatalog.so.1 -o ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 CMakeFiles/FilterCatalog.dir/Filters.cpp.o CMakeFiles/FilterCatalog.dir/FilterCatalog.cpp.o CMakeFiles/FilterCatalog.dir/FilterCatalogEntry.cpp.o CMakeFiles/FilterCatalog.dir/FilterCatalogRunner.cpp.o CMakeFiles/FilterCatalog.dir/FilterMatchers.cpp.o CMakeFiles/FilterCatalog.dir/FunctionalGroupHierarchy.cpp.o  ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 -lboost_serialization ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitFilterCatalog.so.1 ../../../lib/libRDKitFilterCatalog.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 41%] Built target FilterCatalog
[ 41%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/TopologicalTorsionGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Fingerprints.dir/TopologicalTorsionGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp
[ 41%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragFPGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/c++  -DFragCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FragCatalog.dir/FragFPGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragFPGenerator.cpp
make -f Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build.make Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/DependInfo.cmake --color=
Scanning dependencies of target rdPartialCharges
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build.make Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 41%] Building CXX object Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/rdPartialCharges.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdPartialCharges_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdPartialCharges.dir/rdPartialCharges.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/Wrap/rdPartialCharges.cpp
make -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/DependInfo.cmake --color=
Scanning dependencies of target MolChemicalFeatures
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 41%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeature.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/c++  -DMolChemicalFeatures_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCHEMICALFEATURES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeature.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeature.cpp
[ 41%] Linking CXX shared library ../../../lib/libRDKitFingerprints.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_link_script CMakeFiles/Fingerprints.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitFingerprints.so.1 -o ../../../lib/libRDKitFingerprints.so.1.2019.09.1 CMakeFiles/Fingerprints.dir/Fingerprints.cpp.o CMakeFiles/Fingerprints.dir/PatternFingerprints.cpp.o CMakeFiles/Fingerprints.dir/MorganFingerprints.cpp.o CMakeFiles/Fingerprints.dir/AtomPairs.cpp.o CMakeFiles/Fingerprints.dir/MACCS.cpp.o CMakeFiles/Fingerprints.dir/FingerprintGenerator.cpp.o CMakeFiles/Fingerprints.dir/AtomPairGenerator.cpp.o CMakeFiles/Fingerprints.dir/MorganGenerator.cpp.o CMakeFiles/Fingerprints.dir/RDKitFPGenerator.cpp.o CMakeFiles/Fingerprints.dir/FingerprintUtil.cpp.o CMakeFiles/Fingerprints.dir/TopologicalTorsionGenerator.cpp.o  ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1 ../../../lib/libRDKitFingerprints.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 41%] Built target Fingerprints
make -f Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/DependInfo.cmake --color=
Scanning dependencies of target rdShapeHelpers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 41%] Building CXX object Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/rdShapeHelpers.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdShapeHelpers_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdShapeHelpers.dir/rdShapeHelpers.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/Wrap/rdShapeHelpers.cpp
In file included from /usr/include/c++/9/set:60,
                 from /usr/include/boost/graph/adjacency_list.hpp:19,
                 from /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.h:18,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragFPGenerator.cpp:11:
/usr/include/c++/9/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const double&>, std::tuple<>}; _Key = double; _Val = std::pair<const double, int>; _KeyOfValue = std::_Select1st<std::pair<const double, int> >; _Compare = RDKit::ltDouble; _Alloc = std::allocator<std::pair<const double, int> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/functional/hash.hpp:6,
                 from /usr/include/boost/unordered/unordered_set.hpp:18,
                 from /usr/include/boost/unordered_set.hpp:17,
                 from /usr/include/boost/graph/adjacency_list.hpp:21,
                 from /<<PKGBUILDDIR>>/Code/Catalogs/Catalog.h:18,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragFPGenerator.cpp:11:
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDKit::FragFPGenerator::computeFP(const RDKit::ROMol&, const FragCatalog&, const MatchVectType&, ExplicitBitVect*)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 41%] Linking CXX shared library ../../../lib/libRDKitFragCatalog.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/FragCatalog.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitFragCatalog.so.1 -o ../../../lib/libRDKitFragCatalog.so.1.2019.09.1 CMakeFiles/FragCatalog.dir/FragCatalogUtils.cpp.o CMakeFiles/FragCatalog.dir/FragCatGenerator.cpp.o CMakeFiles/FragCatalog.dir/FragCatalogEntry.cpp.o CMakeFiles/FragCatalog.dir/FragCatParams.cpp.o CMakeFiles/FragCatalog.dir/FragFPGenerator.cpp.o  ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitFragCatalog.so.1.2019.09.1 ../../../lib/libRDKitFragCatalog.so.1 ../../../lib/libRDKitFragCatalog.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 41%] Built target FragCatalog
[ 41%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureDef.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/c++  -DMolChemicalFeatures_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCHEMICALFEATURES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureDef.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.cpp
make -f Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/DependInfo.cmake --color=
Scanning dependencies of target ReducedGraphs
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 41%] Building CXX object Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/ReducedGraphs.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_REDUCEDGRAPHS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DReducedGraphs_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ReducedGraphs.dir/ReducedGraphs.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs/ReducedGraphs.cpp
[ 41%] Linking CXX shared module ../../../../rdkit/Chem/rdPartialCharges.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdPartialCharges.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdPartialCharges.so CMakeFiles/rdPartialCharges.dir/rdPartialCharges.cpp.o  ../../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 41%] Built target rdPartialCharges
[ 41%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/c++  -DMolChemicalFeatures_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCHEMICALFEATURES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureFactory.cpp
make -f Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/DependInfo.cmake --color=
Scanning dependencies of target SubstructLibrary
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 41%] Building CXX object Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/SubstructLibrary.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBSTRUCTLIBRARY_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubstructLibrary_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/SubstructLibrary.dir/SubstructLibrary.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/SubstructLibrary.cpp
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/Wrap/rdShapeHelpers.cpp:13:
/<<PKGBUILDDIR>>/Code/Geometry/point.h: In function 'boost::python::tuple RDKit::getUnionOfTwoBox(boost::python::tuple, boost::python::tuple)':
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:31: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                         ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:43: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::y' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                                     ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:55: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::z' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                                                 ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:31: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                         ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:43: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::y' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                                     ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:55: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::z' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                                                 ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:31: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                         ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:43: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::y' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                                     ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:55: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::z' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                                                 ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:31: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                         ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:43: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::y' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                                     ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:55: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::z' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                                                 ~~~~~~^
[ 41%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/FeatureParser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/c++  -DMolChemicalFeatures_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCHEMICALFEATURES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolChemicalFeatures.dir/FeatureParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/FeatureParser.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs/ReducedGraphs.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 41%] Linking CXX shared module ../../../../rdkit/Chem/rdShapeHelpers.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdShapeHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdShapeHelpers.so CMakeFiles/rdShapeHelpers.dir/rdShapeHelpers.cpp.o  ../../../../lib/libRDKitShapeHelpers.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 41%] Built target rdShapeHelpers
make -f Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/build.make Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMolInterchange
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/build.make Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 41%] Building CXX object Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/rdMolInterchange.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolInterchange_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/rapidjson -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMolInterchange.dir/rdMolInterchange.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/Wrap/rdMolInterchange.cpp
[ 41%] Linking CXX shared library ../../../lib/libRDKitReducedGraphs.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs && /usr/bin/cmake -E cmake_link_script CMakeFiles/ReducedGraphs.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitReducedGraphs.so.1 -o ../../../lib/libRDKitReducedGraphs.so.1.2019.09.1 CMakeFiles/ReducedGraphs.dir/ReducedGraphs.cpp.o  ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitReducedGraphs.so.1.2019.09.1 ../../../lib/libRDKitReducedGraphs.so.1 ../../../lib/libRDKitReducedGraphs.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 41%] Built target ReducedGraphs
make -f Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/DependInfo.cmake --color=
Scanning dependencies of target testSLNParse
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 41%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/test.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SLNPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testSLNParse.dir/test.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/test.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/FeatureParser.h:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/FeatureParser.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  721 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In function 'RDKit::MolChemicalFeatureDef* RDKit::Local::parseFeatureDef(std::istream&, const string&, unsigned int&, const std::map<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char> >&)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/FeatureParser.h:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/FeatureParser.cpp:11:
/usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
 1662 |    _M_range_insert(__pos, __first, __last,
      |    ^~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
[ 42%] Linking CXX shared library ../../../lib/libRDKitMolChemicalFeatures.so
[ 42%] Linking CXX shared module ../../../../rdkit/Chem/rdMolInterchange.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolInterchange.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdMolInterchange.so CMakeFiles/rdMolInterchange.dir/rdMolInterchange.cpp.o  ../../../../lib/libRDKitMolInterchange.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolChemicalFeatures.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitMolChemicalFeatures.so.1 -o ../../../lib/libRDKitMolChemicalFeatures.so.1.2019.09.1 CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeature.cpp.o CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureDef.cpp.o CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o CMakeFiles/MolChemicalFeatures.dir/FeatureParser.cpp.o  ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 42%] Built target rdMolInterchange
make -f Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/build.make Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/DependInfo.cmake --color=
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolChemicalFeatures.so.1.2019.09.1 ../../../lib/libRDKitMolChemicalFeatures.so.1 ../../../lib/libRDKitMolChemicalFeatures.so
Scanning dependencies of target rdSLNParse
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 42%] Building CXX object Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/rdSLNParse.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSLNParse_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdSLNParse.dir/rdSLNParse.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/Wrap/rdSLNParse.cpp
[ 42%] Built target MolChemicalFeatures
make -f Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/DependInfo.cmake --color=
Scanning dependencies of target rdchem
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 42%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/rdchem.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdchem.dir/rdchem.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/rdchem.cpp
[ 42%] Linking CXX shared library ../../../lib/libRDKitSubstructLibrary.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary && /usr/bin/cmake -E cmake_link_script CMakeFiles/SubstructLibrary.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitSubstructLibrary.so.1 -o ../../../lib/libRDKitSubstructLibrary.so.1.2019.09.1 CMakeFiles/SubstructLibrary.dir/SubstructLibrary.cpp.o  ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 -lboost_serialization ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitSubstructLibrary.so.1.2019.09.1 ../../../lib/libRDKitSubstructLibrary.so.1 ../../../lib/libRDKitSubstructLibrary.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 42%] Built target SubstructLibrary
[ 42%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Table.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdchem.dir/Table.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Table.cpp
[ 42%] Linking CXX shared module ../../../../rdkit/Chem/rdSLNParse.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdSLNParse.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdSLNParse.so CMakeFiles/rdSLNParse.dir/rdSLNParse.cpp.o  ../../../../lib/libRDKitSLNParse.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 42%] Built target rdSLNParse
make -f Code/ForceField/CMakeFiles/ForceField.dir/build.make Code/ForceField/CMakeFiles/ForceField.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ForceField /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/CMakeFiles/ForceField.dir/DependInfo.cmake --color=
Scanning dependencies of target ForceField
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ForceField/CMakeFiles/ForceField.dir/build.make Code/ForceField/CMakeFiles/ForceField.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 42%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/ForceField.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/ForceField.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/ForceField.cpp
[ 42%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Atom.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdchem.dir/Atom.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Atom.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/ForceField/ForceField.h:14,
                 from /<<PKGBUILDDIR>>/Code/ForceField/ForceField.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDKit::Snapshot&}; _Tp = RDKit::Snapshot; _Alloc = std::allocator<RDKit::Snapshot>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Snapshot>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/ForceField/ForceField.h:14,
                 from /<<PKGBUILDDIR>>/Code/ForceField/ForceField.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In member function 'double ForceFields::ForceField::calcEnergy(std::vector<double>*) const':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function 'int BFGSOpt::minimize(unsigned int, double*, double, unsigned int&, double&, EnergyFunctor, GradientFunctor, unsigned int, RDKit::SnapshotVect*, double, unsigned int) [with EnergyFunctor = ForceFieldsHelper::calcEnergy; GradientFunctor = ForceFieldsHelper::calcGradient]':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 42%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/AngleBend.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/UFF/AngleBend.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/AngleBend.cpp
[ 42%] Linking CXX executable testSLNParse
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSLNParse.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testSLNParse.dir/test.cpp.o  -o testSLNParse  ../../../lib/libRDKitSLNParse.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 42%] Built target testSLNParse
make -f Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/Optimizer /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/DependInfo.cmake --color=
Scanning dependencies of target testOptimizer
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 43%] Building CXX object Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/testOptimizer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_OPTIMIZER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testOptimizer.dir/testOptimizer.cpp.o -c /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/testOptimizer.cpp
[ 44%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Bond.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdchem.dir/Bond.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Bond.cpp
[ 44%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/BondStretch.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/UFF/BondStretch.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/BondStretch.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Snapshot.h:14,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/BFGSOpt.h:13,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/testOptimizer.cpp:16:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDKit::Snapshot&}; _Tp = RDKit::Snapshot; _Alloc = std::allocator<RDKit::Snapshot>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Snapshot>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Snapshot.h:14,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/BFGSOpt.h:13,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Optimizer/testOptimizer.cpp:16:
/usr/include/c++/9/bits/stl_vector.h: In function 'int BFGSOpt::minimize(unsigned int, double*, double, unsigned int&, double&, EnergyFunctor, GradientFunctor, unsigned int, RDKit::SnapshotVect*, double, unsigned int) [with EnergyFunctor = double (*)(double*); GradientFunctor = double (*)(double*, double*)]':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 44%] Linking CXX executable testOptimizer
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer && /usr/bin/cmake -E cmake_link_script CMakeFiles/testOptimizer.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testOptimizer.dir/testOptimizer.cpp.o  -o testOptimizer  ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 44%] Built target testOptimizer
make -f Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build.make Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/DependInfo.cmake --color=
Scanning dependencies of target rdFingerprintGenerator
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build.make Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 44%] Building CXX object Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/FingerprintGeneratorWrapper.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdFingerprintGenerator_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdFingerprintGenerator.dir/FingerprintGeneratorWrapper.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Wrap/FingerprintGeneratorWrapper.cpp
[ 44%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/Nonbonded.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/UFF/Nonbonded.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/Nonbonded.cpp
[ 45%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/Inversion.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/UFF/Inversion.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/Inversion.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Atom.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Bond.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 45%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/TorsionAngle.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/UFF/TorsionAngle.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/TorsionAngle.cpp
[ 45%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Mol.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdchem.dir/Mol.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Mol.cpp
[ 45%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/DistanceConstraint.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/UFF/DistanceConstraint.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/DistanceConstraint.cpp
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolChemicalFeatures_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMolChemicalFeatures.dir/rdMolChemicalFeatures.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/Wrap/rdMolChemicalFeatures.cpp
[ 45%] Linking CXX shared module ../../../../rdkit/Chem/rdFingerprintGenerator.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdFingerprintGenerator.dir/link.txt --verbose=1
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[ 45%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/AngleConstraint.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/UFF/AngleConstraint.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/AngleConstraint.cpp
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/DependInfo.cmake --color=
Scanning dependencies of target testReducedGraphs
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[ 45%] Building CXX object Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_REDUCEDGRAPHS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testReducedGraphs.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs/test1.cpp
[ 45%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/TorsionConstraint.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/UFF/TorsionConstraint.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/TorsionConstraint.cpp
[ 45%] Building CXX object Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeature.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolChemicalFeatures_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeature.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/Wrap/MolChemicalFeature.cpp
[ 45%] Linking CXX executable testReducedGraphs
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs && /usr/bin/cmake -E cmake_link_script CMakeFiles/testReducedGraphs.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testReducedGraphs.dir/test1.cpp.o  -o testReducedGraphs  ../../../lib/libRDKitReducedGraphs.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 45%] Built target testReducedGraphs
[ 45%] Building CXX object Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolChemicalFeatures_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/Wrap/MolChemicalFeatureFactory.cpp
[ 45%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/PositionConstraint.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/UFF/PositionConstraint.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/PositionConstraint.cpp
[ 46%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/Params.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/UFF/Params.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/Params.cpp
[ 46%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Conformer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdchem.dir/Conformer.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Conformer.cpp
[ 46%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/AngleBend.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/MMFF/AngleBend.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/AngleBend.cpp
[ 46%] Building CXX object Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/ChemicalFeatureUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolChemicalFeatures_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMolChemicalFeatures.dir/ChemicalFeatureUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/Wrap/ChemicalFeatureUtils.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Mol.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 46%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/BondStretch.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/MMFF/BondStretch.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/BondStretch.cpp
[ 46%] Linking CXX shared module ../../../../rdkit/Chem/rdMolChemicalFeatures.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolChemicalFeatures.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdMolChemicalFeatures.so CMakeFiles/rdMolChemicalFeatures.dir/rdMolChemicalFeatures.cpp.o CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeature.cpp.o CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o CMakeFiles/rdMolChemicalFeatures.dir/ChemicalFeatureUtils.cpp.o  ../../../../lib/libRDKitMolChemicalFeatures.so.1.2019.09.1 ../../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 46%] Built target rdMolChemicalFeatures
[ 46%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/StretchBend.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/MMFF/StretchBend.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/StretchBend.cpp
[ 46%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/OopBend.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/MMFF/OopBend.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/OopBend.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Conformer.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Conformer.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In member function 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Conformer.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Conformer.cpp:21:
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h: In member function 'T PySequenceHolder<T>::operator[](unsigned int) const [with T = double]':
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
   68 |       T res = python::extract<T>(d_seq[which]);
      |         ^~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/Conformer.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In function 'void RDKit::SetAtomPos(RDKit::Conformer*, unsigned int, boost::python::api::object)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 46%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/TorsionAngle.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/MMFF/TorsionAngle.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/TorsionAngle.cpp
[ 46%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/Nonbonded.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/MMFF/Nonbonded.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Nonbonded.cpp
[ 47%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/DistanceConstraint.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/MMFF/DistanceConstraint.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/DistanceConstraint.cpp
[ 47%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/RingInfo.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdchem.dir/RingInfo.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/RingInfo.cpp
[ 47%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/AngleConstraint.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/MMFF/AngleConstraint.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/AngleConstraint.cpp
[ 47%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/TorsionConstraint.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/MMFF/TorsionConstraint.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/TorsionConstraint.cpp
[ 47%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/PositionConstraint.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/MMFF/PositionConstraint.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/PositionConstraint.cpp
[ 47%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/Params.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceField.dir/MMFF/Params.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Params.cpp
[ 47%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/EditableMol.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdchem.dir/EditableMol.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/EditableMol.cpp
[ 47%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/MonomerInfo.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdchem.dir/MonomerInfo.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MonomerInfo.cpp
[ 48%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/ResonanceMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdchem.dir/ResonanceMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/ResonanceMolSupplier.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Params.h:20,
                 from /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Params.cpp:17:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFPBCI&}; _Tp = ForceFields::MMFF::MMFFPBCI; _Alloc = std::allocator<ForceFields::MMFF::MMFFPBCI>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFPBCI>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFPBCI*, std::vector<ForceFields::MMFF::MMFFPBCI> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFChg&}; _Tp = ForceFields::MMFF::MMFFChg; _Alloc = std::allocator<ForceFields::MMFF::MMFFChg>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFChg>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFChg*, std::vector<ForceFields::MMFF::MMFFChg> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFBond&}; _Tp = ForceFields::MMFF::MMFFBond; _Alloc = std::allocator<ForceFields::MMFF::MMFFBond>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFBond>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFBond*, std::vector<ForceFields::MMFF::MMFFBond> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFHerschbachLaurie&}; _Tp = ForceFields::MMFF::MMFFHerschbachLaurie; _Alloc = std::allocator<ForceFields::MMFF::MMFFHerschbachLaurie>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFHerschbachLaurie>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFHerschbachLaurie*, std::vector<ForceFields::MMFF::MMFFHerschbachLaurie> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFCovRadPauEle&}; _Tp = ForceFields::MMFF::MMFFCovRadPauEle; _Alloc = std::allocator<ForceFields::MMFF::MMFFCovRadPauEle>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFCovRadPauEle>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFCovRadPauEle*, std::vector<ForceFields::MMFF::MMFFCovRadPauEle> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFAngle&}; _Tp = ForceFields::MMFF::MMFFAngle; _Alloc = std::allocator<ForceFields::MMFF::MMFFAngle>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFAngle>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFAngle*, std::vector<ForceFields::MMFF::MMFFAngle> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFStbn&}; _Tp = ForceFields::MMFF::MMFFStbn; _Alloc = std::allocator<ForceFields::MMFF::MMFFStbn>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFStbn>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFStbn*, std::vector<ForceFields::MMFF::MMFFStbn> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFOop&}; _Tp = ForceFields::MMFF::MMFFOop; _Alloc = std::allocator<ForceFields::MMFF::MMFFOop>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFOop>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFOop*, std::vector<ForceFields::MMFF::MMFFOop> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFTor&}; _Tp = ForceFields::MMFF::MMFFTor; _Alloc = std::allocator<ForceFields::MMFF::MMFFTor>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFTor>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFTor*, std::vector<ForceFields::MMFF::MMFFTor> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFVdW&}; _Tp = ForceFields::MMFF::MMFFVdW; _Alloc = std::allocator<ForceFields::MMFF::MMFFVdW>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFVdW>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFVdW*, std::vector<ForceFields::MMFF::MMFFVdW> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Params.h:20,
                 from /<<PKGBUILDDIR>>/Code/ForceField/MMFF/Params.cpp:17:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFPBCICollection::MMFFPBCICollection(std::string)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFPBCI*, std::vector<ForceFields::MMFF::MMFFPBCI> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFChgCollection::MMFFChgCollection(std::string)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFChg*, std::vector<ForceFields::MMFF::MMFFChg> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFBondCollection::MMFFBondCollection(std::string)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFBond*, std::vector<ForceFields::MMFF::MMFFBond> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFBndkCollection::MMFFBndkCollection(std::string)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFBond*, std::vector<ForceFields::MMFF::MMFFBond> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFHerschbachLaurieCollection::MMFFHerschbachLaurieCollection(std::string)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFHerschbachLaurie*, std::vector<ForceFields::MMFF::MMFFHerschbachLaurie> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFCovRadPauEleCollection::MMFFCovRadPauEleCollection(std::string)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFCovRadPauEle*, std::vector<ForceFields::MMFF::MMFFCovRadPauEle> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFAngleCollection::MMFFAngleCollection(std::string)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFAngle*, std::vector<ForceFields::MMFF::MMFFAngle> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFStbnCollection::MMFFStbnCollection(std::string)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFStbn*, std::vector<ForceFields::MMFF::MMFFStbn> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFOopCollection::MMFFOopCollection(bool, std::string)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFOop*, std::vector<ForceFields::MMFF::MMFFOop> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFTorCollection::MMFFTorCollection(bool, std::string)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFTor*, std::vector<ForceFields::MMFF::MMFFTor> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFVdWCollection::MMFFVdWCollection(std::string)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFVdW*, std::vector<ForceFields::MMFF::MMFFVdW> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 48%] Linking CXX shared library ../../lib/libRDKitForceField.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/cmake -E cmake_link_script CMakeFiles/ForceField.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitForceField.so.1 -o ../../lib/libRDKitForceField.so.1.2019.09.1 CMakeFiles/ForceField.dir/ForceField.cpp.o CMakeFiles/ForceField.dir/UFF/AngleBend.cpp.o CMakeFiles/ForceField.dir/UFF/BondStretch.cpp.o CMakeFiles/ForceField.dir/UFF/Nonbonded.cpp.o CMakeFiles/ForceField.dir/UFF/Inversion.cpp.o CMakeFiles/ForceField.dir/UFF/TorsionAngle.cpp.o CMakeFiles/ForceField.dir/UFF/DistanceConstraint.cpp.o CMakeFiles/ForceField.dir/UFF/AngleConstraint.cpp.o CMakeFiles/ForceField.dir/UFF/TorsionConstraint.cpp.o CMakeFiles/ForceField.dir/UFF/PositionConstraint.cpp.o CMakeFiles/ForceField.dir/UFF/Params.cpp.o CMakeFiles/ForceField.dir/MMFF/AngleBend.cpp.o CMakeFiles/ForceField.dir/MMFF/BondStretch.cpp.o CMakeFiles/ForceField.dir/MMFF/StretchBend.cpp.o CMakeFiles/ForceField.dir/MMFF/OopBend.cpp.o CMakeFiles/ForceField.dir/MMFF/TorsionAngle.cpp.o CMakeFiles/ForceField.dir/MMFF/Nonbonded.cpp.o CMakeFiles/ForceField.dir/MMFF/DistanceConstraint.cpp.o CMakeFiles/ForceField.dir/MMFF/AngleConstraint.cpp.o CMakeFiles/ForceField.dir/MMFF/TorsionConstraint.cpp.o CMakeFiles/ForceField.dir/MMFF/PositionConstraint.cpp.o CMakeFiles/ForceField.dir/MMFF/Params.cpp.o  ../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitForceField.so.1.2019.09.1 ../../lib/libRDKitForceField.so.1 ../../lib/libRDKitForceField.so
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/DependInfo.cmake --color=
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdReducedGraphs_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdReducedGraphs.dir/rdReducedGraphs.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs/Wrap/rdReducedGraphs.cpp
[ 48%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/MolBundle.cpp.o
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[ 48%] Linking CXX shared module ../../../../rdkit/Chem/rdReducedGraphs.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdReducedGraphs.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdReducedGraphs.so CMakeFiles/rdReducedGraphs.dir/rdReducedGraphs.cpp.o  ../../../../lib/libRDKitReducedGraphs.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 48%] Built target rdReducedGraphs
make -f Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/DependInfo.cmake --color=
Scanning dependencies of target ForceFieldHelpers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 49%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/UFF/AtomTyper.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/c++  -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceFieldHelpers.dir/UFF/AtomTyper.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/AtomTyper.cpp
/<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SubstanceGroup.cpp: In function 'void RDKit::{anonymous}::addBracketHelper(RDKit::SubstanceGroup&, boost::python::api::object)':
/<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SubstanceGroup.cpp:55:16: warning: unused variable 'i' [-Wunused-variable]
   55 |   unsigned int i = 0;
      |                ^
[ 49%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/UFF/Builder.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/c++  -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceFieldHelpers.dir/UFF/Builder.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/Builder.cpp
[ 49%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/MMFF/AtomTyper.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/c++  -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceFieldHelpers.dir/MMFF/AtomTyper.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/AtomTyper.cpp
[ 49%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/MMFF/Builder.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/c++  -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceFieldHelpers.dir/MMFF/Builder.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/Builder.cpp
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SubstanceGroup.cpp:17:
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:31: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                         ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:43: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::y' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                                     ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:56:55: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::z' may be used uninitialized in this function [-Wmaybe-uninitialized]
   56 |       : Point(other), x(other.x), y(other.y), z(other.z) {}
      |                                                 ~~~~~~^
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SubstanceGroup.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 49%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionAngleM6.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/c++  -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionAngleM6.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionAngleM6.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/AtomTyper.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 49%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionPreferences.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/c++  -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionPreferences.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.cpp
[ 49%] Linking CXX shared module ../../../rdkit/Chem/rdchem.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdchem.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/Chem/rdchem.so CMakeFiles/rdchem.dir/rdchem.cpp.o CMakeFiles/rdchem.dir/Table.cpp.o CMakeFiles/rdchem.dir/Atom.cpp.o CMakeFiles/rdchem.dir/Bond.cpp.o CMakeFiles/rdchem.dir/Mol.cpp.o CMakeFiles/rdchem.dir/Conformer.cpp.o CMakeFiles/rdchem.dir/RingInfo.cpp.o CMakeFiles/rdchem.dir/EditableMol.cpp.o CMakeFiles/rdchem.dir/MonomerInfo.cpp.o CMakeFiles/rdchem.dir/ResonanceMolSupplier.cpp.o CMakeFiles/rdchem.dir/MolBundle.cpp.o CMakeFiles/rdchem.dir/StereoGroup.cpp.o CMakeFiles/rdchem.dir/SubstanceGroup.cpp.o  ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 49%] Built target rdchem
[ 49%] Linking CXX shared library ../../../lib/libRDKitForceFieldHelpers.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/ForceFieldHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitForceFieldHelpers.so.1 -o ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 CMakeFiles/ForceFieldHelpers.dir/UFF/AtomTyper.cpp.o CMakeFiles/ForceFieldHelpers.dir/UFF/Builder.cpp.o CMakeFiles/ForceFieldHelpers.dir/MMFF/AtomTyper.cpp.o CMakeFiles/ForceFieldHelpers.dir/MMFF/Builder.cpp.o CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionAngleM6.cpp.o CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionPreferences.cpp.o  ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1 ../../../lib/libRDKitForceFieldHelpers.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 49%] Built target ForceFieldHelpers
make -f Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/depend
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DistGeom /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/CMakeFiles/DistGeometry.dir/DependInfo.cmake --color=
make -f Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build.make Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/depend
make -f Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ForceField/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/DependInfo.cmake --color=
Scanning dependencies of target MolAlign
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Scanning dependencies of target DistGeometry
[ 49%] Building CXX object Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/AlignMolecules.cpp.o
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/DistGeom/CMakeFiles/DistGeometry.dir/build.make Code/DistGeom/CMakeFiles/DistGeometry.dir/build
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/c++  -DMolAlign_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLALIGN_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolAlign.dir/AlignMolecules.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/AlignMolecules.cpp
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Scanning dependencies of target rdForceField
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build.make Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build
Scanning dependencies of target rdForceFieldHelpers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 49%] Building CXX object Code/DistGeom/CMakeFiles/DistGeometry.dir/DistGeomUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/c++  -DDistGeometry_EXPORTS -DRDKIT_DISTGEOMETRY_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/DistGeometry.dir/DistGeomUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/DistGeom/DistGeomUtils.cpp
[ 49%] Building CXX object Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/rdForceFields.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdForceFieldHelpers_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdForceFieldHelpers.dir/rdForceFields.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/Wrap/rdForceFields.cpp
[ 50%] Building CXX object Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/ForceField.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdForceField_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdForceField.dir/ForceField.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/Wrap/ForceField.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:15,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Matrix.h:15,
                 from /<<PKGBUILDDIR>>/Code/Numerics/SquareMatrix.h:14,
                 from /<<PKGBUILDDIR>>/Code/Geometry/Transform3D.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/AlignMolecules.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/AlignMolecules.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 50%] Building CXX object Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/O3AAlignMolecules.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/c++  -DMolAlign_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLALIGN_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolAlign.dir/O3AAlignMolecules.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/O3AAlignMolecules.cpp
[ 50%] Building CXX object Code/DistGeom/CMakeFiles/DistGeometry.dir/TriangleSmooth.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/c++  -DDistGeometry_EXPORTS -DRDKIT_DISTGEOMETRY_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/DistGeometry.dir/TriangleSmooth.cpp.o -c /<<PKGBUILDDIR>>/Code/DistGeom/TriangleSmooth.cpp
[ 50%] Building CXX object Code/DistGeom/CMakeFiles/DistGeometry.dir/DistViolationContrib.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/c++  -DDistGeometry_EXPORTS -DRDKIT_DISTGEOMETRY_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/DistGeometry.dir/DistViolationContrib.cpp.o -c /<<PKGBUILDDIR>>/Code/DistGeom/DistViolationContrib.cpp
/<<PKGBUILDDIR>>/Code/ForceField/Wrap/ForceField.cpp: In member function 'double ForceFields::PyForceField::calcEnergyWithPos(const boost::python::api::object&)':
/<<PKGBUILDDIR>>/Code/ForceField/Wrap/ForceField.cpp:135:12: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  135 |       c[i] = python::extract<double>(pos[i]);
/<<PKGBUILDDIR>>/Code/ForceField/Wrap/ForceField.cpp: In member function 'PyObject* ForceFields::PyForceField::calcGradWithPos(const boost::python::api::object&)':
/<<PKGBUILDDIR>>/Code/ForceField/Wrap/ForceField.cpp:169:12: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  169 |       c[i] = python::extract<double>(pos[i]);
[ 50%] Linking CXX shared module ../../../../rdkit/Chem/rdForceFieldHelpers.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdForceFieldHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdForceFieldHelpers.so CMakeFiles/rdForceFieldHelpers.dir/rdForceFields.cpp.o  ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 50%] Built target rdForceFieldHelpers
[ 51%] Building CXX object Code/DistGeom/CMakeFiles/DistGeometry.dir/ChiralViolationContrib.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/c++  -DDistGeometry_EXPORTS -DRDKIT_DISTGEOMETRY_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/DistGeometry.dir/ChiralViolationContrib.cpp.o -c /<<PKGBUILDDIR>>/Code/DistGeom/ChiralViolationContrib.cpp
[ 51%] Linking CXX shared library ../../../lib/libRDKitMolAlign.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolAlign.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitMolAlign.so.1 -o ../../../lib/libRDKitMolAlign.so.1.2019.09.1 CMakeFiles/MolAlign.dir/AlignMolecules.cpp.o CMakeFiles/MolAlign.dir/O3AAlignMolecules.cpp.o  ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1 ../../../lib/libRDKitMolAlign.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 51%] Built target MolAlign
make -f Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/depend
make -f External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/build.make External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/depend
[ 51%] Linking CXX shared library ../../lib/libRDKitDistGeometry.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/cmake -E cmake_link_script CMakeFiles/DistGeometry.dir/link.txt --verbose=1
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/External/CoordGen/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Depictor /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/DependInfo.cmake --color=
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitDistGeometry.so.1 -o ../../lib/libRDKitDistGeometry.so.1.2019.09.1 CMakeFiles/DistGeometry.dir/DistGeomUtils.cpp.o CMakeFiles/DistGeometry.dir/TriangleSmooth.cpp.o CMakeFiles/DistGeometry.dir/DistViolationContrib.cpp.o CMakeFiles/DistGeometry.dir/ChiralViolationContrib.cpp.o  ../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../lib/libRDKitForceField.so.1.2019.09.1 ../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
Scanning dependencies of target Depictor
Scanning dependencies of target rdCoordGen
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/build.make External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 51%] Building CXX object External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/rdCoordGen.cpp.o
[ 51%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/RDDepictor.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/Wrap && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DIN_COORDGEN -DIN_MAEPARSER -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdCoordGen_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdCoordGen.dir/rdCoordGen.cpp.o -c /<<PKGBUILDDIR>>/External/CoordGen/Wrap/rdCoordGen.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/c++  -DDepictor_EXPORTS -DIN_COORDGEN -DRDKIT_DEPICTOR_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Depictor.dir/RDDepictor.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitDistGeometry.so.1.2019.09.1 ../../lib/libRDKitDistGeometry.so.1 ../../lib/libRDKitDistGeometry.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 51%] Built target DistGeometry
make -f Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/DependInfo.cmake --color=
Scanning dependencies of target DistGeomHelpers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 52%] Building CXX object Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/BoundsMatrixBuilder.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/c++  -DDistGeomHelpers_EXPORTS -DRDKIT_DISTGEOMHELPERS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/DistGeomHelpers.dir/BoundsMatrixBuilder.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.cpp
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.cpp:12:
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h: In member function 'RDDepict::EmbeddedAtom RDDepict::EmbeddedFrag::GetEmbeddedAtom(unsigned int) const':
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h:314:18: warning: implicitly-declared 'RDDepict::EmbeddedAtom::EmbeddedAtom(const RDDepict::EmbeddedAtom&)' is deprecated [-Wdeprecated-copy]
  314 |     return posi->second;
      |                  ^~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h:59:17: note: because 'RDDepict::EmbeddedAtom' has user-provided 'RDDepict::EmbeddedAtom& RDDepict::EmbeddedAtom::operator=(const RDDepict::EmbeddedAtom&)'
   59 |   EmbeddedAtom &operator=(const EmbeddedAtom &other) {
      |                 ^~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function 'unsigned int RDDepict::copyCoordinate(RDKit::ROMol&, std::__cxx11::list<RDDepict::EmbeddedFrag>&, bool)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 52%] Linking CXX shared module ../../../rdkit/ForceField/rdForceField.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdForceField.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/ForceField/rdForceField.so CMakeFiles/rdForceField.dir/ForceField.cpp.o  ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 52%] Built target rdForceField
make -f Code/DistGeom/CMakeFiles/testDistGeom.dir/build.make Code/DistGeom/CMakeFiles/testDistGeom.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DistGeom /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/CMakeFiles/testDistGeom.dir/DependInfo.cmake --color=
/usr/include/c++/9/bits/stl_vector.h: In function 'unsigned int RDKit::CoordGen::addCoords(T&, const RDKit::CoordGen::CoordGenParams*) [with T = RDKit::ROMol]':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
Scanning dependencies of target testDistGeom
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/DistGeom/CMakeFiles/testDistGeom.dir/build.make Code/DistGeom/CMakeFiles/testDistGeom.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 52%] Building CXX object Code/DistGeom/CMakeFiles/testDistGeom.dir/testDistGeom.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/c++  -DRDKIT_DISTGEOMETRY_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testDistGeom.dir/testDistGeom.cpp.o -c /<<PKGBUILDDIR>>/Code/DistGeom/testDistGeom.cpp
/usr/include/c++/9/bits/stl_vector.h: In function 'unsigned int RDDepict::compute2DCoords(RDKit::ROMol&, const INT_POINT2D_MAP*, bool, bool, unsigned int, unsigned int, int, bool, bool)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 52%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/EmbeddedFrag.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/c++  -DDepictor_EXPORTS -DIN_COORDGEN -DRDKIT_DEPICTOR_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Depictor.dir/EmbeddedFrag.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/External/CoordGen/Wrap/rdCoordGen.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/External/CoordGen/Wrap/rdCoordGen.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function 'unsigned int RDKit::CoordGen::addCoords(T&, const RDKit::CoordGen::CoordGenParams*) [with T = RDKit::ROMol]':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:25,
                 from /<<PKGBUILDDIR>>/External/CoordGen/Wrap/rdCoordGen.cpp:17:
/<<PKGBUILDDIR>>/Code/Geometry/point.h: In function 'void RDKit::{anonymous}::SetCoordMap(RDKit::CoordGen::CoordGenParams*, boost::python::dict&)':
/<<PKGBUILDDIR>>/Code/Geometry/point.h:293:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point2D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
  293 |     x = other.x;
      |         ~~~~~~^
[ 52%] Building CXX object Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/Embedder.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/c++  -DDistGeomHelpers_EXPORTS -DRDKIT_DISTGEOMHELPERS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/DistGeomHelpers.dir/Embedder.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Embedder.cpp
[ 52%] Linking CXX shared module ../../../rdkit/Chem/rdCoordGen.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdCoordGen.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/Chem/rdCoordGen.so CMakeFiles/rdCoordGen.dir/rdCoordGen.cpp.o  -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lpython3.8 -lboost_python3 -lboost_serialization 
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:17:
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h: In member function 'RDDepict::EmbeddedAtom RDDepict::EmbeddedFrag::GetEmbeddedAtom(unsigned int) const':
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h:314:18: warning: implicitly-declared 'RDDepict::EmbeddedAtom::EmbeddedAtom(const RDDepict::EmbeddedAtom&)' is deprecated [-Wdeprecated-copy]
  314 |     return posi->second;
      |                  ^~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h:59:17: note: because 'RDDepict::EmbeddedAtom' has user-provided 'RDDepict::EmbeddedAtom& RDDepict::EmbeddedAtom::operator=(const RDDepict::EmbeddedAtom&)'
   59 |   EmbeddedAtom &operator=(const EmbeddedAtom &other) {
      |                 ^~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp: In member function 'void RDDepict::EmbeddedFrag::addAtomToAtomWithAng(unsigned int, unsigned int)':
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:710:40: warning: implicitly-declared 'RDDepict::EmbeddedAtom::EmbeddedAtom(const RDDepict::EmbeddedAtom&)' is deprecated [-Wdeprecated-copy]
  710 |   EmbeddedAtom refAtom = d_eatoms[toAid];
      |                                        ^
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:17:
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h:59:17: note: because 'RDDepict::EmbeddedAtom' has user-provided 'RDDepict::EmbeddedAtom& RDDepict::EmbeddedAtom::operator=(const RDDepict::EmbeddedAtom&)'
   59 |   EmbeddedAtom &operator=(const EmbeddedAtom &other) {
      |                 ^~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp: In member function 'void RDDepict::EmbeddedFrag::addAtomToAtomWithNoAng(unsigned int, unsigned int)':
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:781:40: warning: implicitly-declared 'RDDepict::EmbeddedAtom::EmbeddedAtom(const RDDepict::EmbeddedAtom&)' is deprecated [-Wdeprecated-copy]
  781 |   EmbeddedAtom refAtom = d_eatoms[toAid];
      |                                        ^
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:17:
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h:59:17: note: because 'RDDepict::EmbeddedAtom' has user-provided 'RDDepict::EmbeddedAtom& RDDepict::EmbeddedAtom::operator=(const RDDepict::EmbeddedAtom&)'
   59 |   EmbeddedAtom &operator=(const EmbeddedAtom &other) {
      |                 ^~~~~~~~
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 52%] Built target rdCoordGen
make -f Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build.make Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DistGeom/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/DependInfo.cmake --color=
Scanning dependencies of target DistGeom
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build.make Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 52%] Building CXX object Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/DistGeom.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap && /usr/bin/c++  -DDistGeom_EXPORTS -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/DistGeom.dir/DistGeom.cpp.o -c /<<PKGBUILDDIR>>/Code/DistGeom/Wrap/DistGeom.cpp
[ 52%] Linking CXX executable testDistGeom
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDistGeom.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testDistGeom.dir/testDistGeom.cpp.o  -o testDistGeom  ../../lib/libRDKitDistGeometry.so.1.2019.09.1 ../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../lib/libRDKitForceField.so.1.2019.09.1 ../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 52%] Built target testDistGeom
[ 52%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/DepictUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/c++  -DDepictor_EXPORTS -DIN_COORDGEN -DRDKIT_DEPICTOR_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Depictor.dir/DepictUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/DepictUtils.cpp
In file included from /usr/include/c++/9/map:60,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:10:
/usr/include/c++/9/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = unsigned int; _Val = std::pair<const unsigned int, RDDepict::EmbeddedAtom>; _KeyOfValue = std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]':
/usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
 2187 |     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const unsigned int&>, std::tuple<>}; _Key = unsigned int; _Val = std::pair<const unsigned int, RDDepict::EmbeddedAtom>; _KeyOfValue = std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:10:
/usr/include/c++/9/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::reflectIfNecessaryThirdPt(RDDepict::EmbeddedFrag&, unsigned int, unsigned int, unsigned int)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::reflectIfNecessaryDensity(RDDepict::EmbeddedFrag&, unsigned int, unsigned int)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'RDGeom::Transform2D RDDepict::EmbeddedFrag::computeTwoAtomTrans(unsigned int, unsigned int, const INT_POINT2D_MAP&)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'std::vector<std::pair<int, int> > RDDepict::EmbeddedFrag::findCollisions(const double*, bool)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::openAngles(const double*, unsigned int, unsigned int)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::updateNewNeighs(unsigned int)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In constructor 'RDDepict::EmbeddedFrag::EmbeddedFrag(unsigned int, const RDKit::ROMol*)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::addAtomToAtomWithNoAng(unsigned int, unsigned int)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/9/map:60,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:10:
/usr/include/c++/9/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<unsigned int&&>, std::tuple<>}; _Key = unsigned int; _Val = std::pair<const unsigned int, RDDepict::EmbeddedAtom>; _KeyOfValue = std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.cpp:10:
/usr/include/c++/9/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](std::map<_Key, _Tp, _Compare, _Alloc>::key_type&&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::permuteBonds(unsigned int, unsigned int, unsigned int)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::initFromRingCoords(const INT_VECT&, const INT_POINT2D_MAP&)':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'RDGeom::Transform2D RDDepict::EmbeddedFrag::computeOneAtomTrans(unsigned int, const RDDepict::EmbeddedFrag&)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::addAtomToAtomWithAng(unsigned int, unsigned int)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::addNonRingAtom(unsigned int, unsigned int)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::reflectIfNecessaryCisTrans(RDDepict::EmbeddedFrag&, unsigned int, unsigned int, unsigned int)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::computeNbrsAndAng(unsigned int, const INT_VECT&)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In constructor 'RDDepict::EmbeddedFrag::EmbeddedFrag(const RDKit::ROMol*, const INT_POINT2D_MAP&)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Embedder.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Embedder.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Embedder.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Embedder.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::mergeWithCommon(RDDepict::EmbeddedFrag&, RDKit::INT_VECT&)':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::mergeFragsWithComm(std::__cxx11::list<RDDepict::EmbeddedFrag>&)':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::expandEfrag(RDKit::INT_LIST&, std::__cxx11::list<RDDepict::EmbeddedFrag>&)':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::flipAboutBond(unsigned int, bool)':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::mergeRing(const RDDepict::EmbeddedFrag&, unsigned int, const INT_VECT&)':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/DepictUtils.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDGeom::Point2D&}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point2D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::removeCollisionsShortenBonds()':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::randomSampleFlipsAndPermutations(unsigned int, unsigned int, int, const DOUBLE_SMART_PTR*, double, bool)':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_vector.h: In function 'void RDKit::DGeomHelpers::detail::embedHelper_(int, int, RDKit::DGeomHelpers::detail::EmbedArgs*, const RDKit::DGeomHelpers::EmbedParameters*)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/DepictUtils.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In function 'RDDepict::INT_PAIR_VECT RDDepict::findBondsPairsToPermuteDeg4(const RDGeom::Point2D&, const INT_VECT&, const VECT_C_POINT&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 52%] Linking CXX shared module ../../../rdkit/DistanceGeometry/DistGeom.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/DistGeom.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/DistanceGeometry/DistGeom.so CMakeFiles/DistGeom.dir/DistGeom.cpp.o  ../../../lib/libRDKitDistGeometry.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 52%] Built target DistGeom
[ 52%] Linking CXX shared library ../../../lib/libRDKitDistGeomHelpers.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/DistGeomHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitDistGeomHelpers.so.1 -o ../../../lib/libRDKitDistGeomHelpers.so.1.2019.09.1 CMakeFiles/DistGeomHelpers.dir/BoundsMatrixBuilder.cpp.o CMakeFiles/DistGeomHelpers.dir/Embedder.cpp.o  ../../../lib/libRDKitDistGeometry.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitDistGeomHelpers.so.1.2019.09.1 ../../../lib/libRDKitDistGeomHelpers.so.1 ../../../lib/libRDKitDistGeomHelpers.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 52%] Built target DistGeomHelpers
[ 52%] Linking CXX shared library ../../../lib/libRDKitDepictor.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/cmake -E cmake_link_script CMakeFiles/Depictor.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitDepictor.so.1 -o ../../../lib/libRDKitDepictor.so.1.2019.09.1 CMakeFiles/Depictor.dir/RDDepictor.cpp.o CMakeFiles/Depictor.dir/EmbeddedFrag.cpp.o CMakeFiles/Depictor.dir/DepictUtils.cpp.o  ../../../lib/libRDKitMolAlign.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1 ../../../lib/libRDKitDepictor.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 52%] Built target Depictor
make -f Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/DependInfo.cmake --color=
Scanning dependencies of target FileParsers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 53%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolFileParser.cpp.o
[ 53%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/Mol2FileParser.cpp.o
[ 53%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolSGroupParsing.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/Mol2FileParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/Mol2FileParser.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/MolFileParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileParser.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/MolSGroupParsing.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupParsing.cpp
[ 53%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolSGroupWriting.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/MolSGroupWriting.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:14:
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h: In function 'std::string RDKit::SGroupWriting::BuildV2000SDSLines(const RDKit::ROMol&)':
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:25: warning: '%3d' directive output may be truncated writing between 3 and 9 bytes into a region of size 4 [-Wformat-truncation=]
   24 |   snprintf(output, 5, " %3d", value);
      |                         ^~~
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:23: note: directive argument in the range [-23342212, 23342214]
   24 |   snprintf(output, 5, " %3d", value);
      |                       ^~~~~~
In file included from /usr/include/stdio.h:867,
                 from /usr/include/c++/9/cstdio:42,
                 from /usr/include/c++/9/ext/string_conversions.h:43,
                 from /usr/include/c++/9/bits/basic_string.h:6493,
                 from /usr/include/c++/9/string:55,
                 from /usr/include/c++/9/bits/locale_classes.h:40,
                 from /usr/include/c++/9/bits/ios_base.h:41,
                 from /usr/include/c++/9/ios:42,
                 from /usr/include/c++/9/ostream:38,
                 from /usr/include/c++/9/iterator:64,
                 from /usr/include/boost/iterator/iterator_traits.hpp:10,
                 from /usr/include/boost/range/mutable_iterator.hpp:23,
                 from /usr/include/boost/range/iterator.hpp:20,
                 from /usr/include/boost/range/begin.hpp:24,
                 from /usr/include/boost/algorithm/string/detail/sequence.hpp:17,
                 from /usr/include/boost/algorithm/string/join.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:11:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 5
   67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   68 |        __bos (__s), __fmt, __va_arg_pack ());
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:14:
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h: In function 'std::string RDKit::SGroupWriting::BuildV2000StringPropLines(unsigned int, const RDKit::ROMol&, const string&, const string&, unsigned int)':
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:25: warning: '%3d' directive output may be truncated writing between 3 and 9 bytes into a region of size 4 [-Wformat-truncation=]
   24 |   snprintf(output, 5, " %3d", value);
      |                         ^~~
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:23: note: directive argument in the range [-23342212, 23342214]
   24 |   snprintf(output, 5, " %3d", value);
      |                       ^~~~~~
In file included from /usr/include/stdio.h:867,
                 from /usr/include/c++/9/cstdio:42,
                 from /usr/include/c++/9/ext/string_conversions.h:43,
                 from /usr/include/c++/9/bits/basic_string.h:6493,
                 from /usr/include/c++/9/string:55,
                 from /usr/include/c++/9/bits/locale_classes.h:40,
                 from /usr/include/c++/9/bits/ios_base.h:41,
                 from /usr/include/c++/9/ios:42,
                 from /usr/include/c++/9/ostream:38,
                 from /usr/include/c++/9/iterator:64,
                 from /usr/include/boost/iterator/iterator_traits.hpp:10,
                 from /usr/include/boost/range/mutable_iterator.hpp:23,
                 from /usr/include/boost/range/iterator.hpp:20,
                 from /usr/include/boost/range/begin.hpp:24,
                 from /usr/include/boost/algorithm/string/detail/sequence.hpp:17,
                 from /usr/include/boost/algorithm/string/join.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:11:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 5
   67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   68 |        __bos (__s), __fmt, __va_arg_pack ());
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupParsing.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:14:
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h: In function 'std::string RDKit::SGroupWriting::BuildV2000STYLines(const RDKit::ROMol&)':
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:25: warning: '%3d' directive output may be truncated writing between 3 and 9 bytes into a region of size 4 [-Wformat-truncation=]
   24 |   snprintf(output, 5, " %3d", value);
      |                         ^~~
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:23: note: directive argument in the range [-23342212, 23342214]
   24 |   snprintf(output, 5, " %3d", value);
      |                       ^~~~~~
In file included from /usr/include/stdio.h:867,
                 from /usr/include/c++/9/cstdio:42,
                 from /usr/include/c++/9/ext/string_conversions.h:43,
                 from /usr/include/c++/9/bits/basic_string.h:6493,
                 from /usr/include/c++/9/string:55,
                 from /usr/include/c++/9/bits/locale_classes.h:40,
                 from /usr/include/c++/9/bits/ios_base.h:41,
                 from /usr/include/c++/9/ios:42,
                 from /usr/include/c++/9/ostream:38,
                 from /usr/include/c++/9/iterator:64,
                 from /usr/include/boost/iterator/iterator_traits.hpp:10,
                 from /usr/include/boost/range/mutable_iterator.hpp:23,
                 from /usr/include/boost/range/iterator.hpp:20,
                 from /usr/include/boost/range/begin.hpp:24,
                 from /usr/include/boost/algorithm/string/detail/sequence.hpp:17,
                 from /usr/include/boost/algorithm/string/join.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:11:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 5
   67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   68 |        __bos (__s), __fmt, __va_arg_pack ());
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:14:
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h: In function 'std::string RDKit::SGroupWriting::BuildV2000SBTLines(const RDKit::ROMol&)':
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:25: warning: '%3d' directive output may be truncated writing between 3 and 9 bytes into a region of size 4 [-Wformat-truncation=]
   24 |   snprintf(output, 5, " %3d", value);
      |                         ^~~
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:23: note: directive argument in the range [-23342212, 23342214]
   24 |   snprintf(output, 5, " %3d", value);
      |                       ^~~~~~
In file included from /usr/include/stdio.h:867,
                 from /usr/include/c++/9/cstdio:42,
                 from /usr/include/c++/9/ext/string_conversions.h:43,
                 from /usr/include/c++/9/bits/basic_string.h:6493,
                 from /usr/include/c++/9/string:55,
                 from /usr/include/c++/9/bits/locale_classes.h:40,
                 from /usr/include/c++/9/bits/ios_base.h:41,
                 from /usr/include/c++/9/ios:42,
                 from /usr/include/c++/9/ostream:38,
                 from /usr/include/c++/9/iterator:64,
                 from /usr/include/boost/iterator/iterator_traits.hpp:10,
                 from /usr/include/boost/range/mutable_iterator.hpp:23,
                 from /usr/include/boost/range/iterator.hpp:20,
                 from /usr/include/boost/range/begin.hpp:24,
                 from /usr/include/boost/algorithm/string/detail/sequence.hpp:17,
                 from /usr/include/boost/algorithm/string/join.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:11:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 5
   67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   68 |        __bos (__s), __fmt, __va_arg_pack ());
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:14:
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:25: warning: '%3d' directive output may be truncated writing between 3 and 9 bytes into a region of size 4 [-Wformat-truncation=]
   24 |   snprintf(output, 5, " %3d", value);
      |                         ^~~
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:23: note: directive argument in the range [-23342212, 23342214]
   24 |   snprintf(output, 5, " %3d", value);
      |                       ^~~~~~
In file included from /usr/include/stdio.h:867,
                 from /usr/include/c++/9/cstdio:42,
                 from /usr/include/c++/9/ext/string_conversions.h:43,
                 from /usr/include/c++/9/bits/basic_string.h:6493,
                 from /usr/include/c++/9/string:55,
                 from /usr/include/c++/9/bits/locale_classes.h:40,
                 from /usr/include/c++/9/bits/ios_base.h:41,
                 from /usr/include/c++/9/ios:42,
                 from /usr/include/c++/9/ostream:38,
                 from /usr/include/c++/9/iterator:64,
                 from /usr/include/boost/iterator/iterator_traits.hpp:10,
                 from /usr/include/boost/range/mutable_iterator.hpp:23,
                 from /usr/include/boost/range/iterator.hpp:20,
                 from /usr/include/boost/range/begin.hpp:24,
                 from /usr/include/boost/algorithm/string/detail/sequence.hpp:17,
                 from /usr/include/boost/algorithm/string/join.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:11:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 5
   67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   68 |        __bos (__s), __fmt, __va_arg_pack ());
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/Mol2FileParser.cpp:37:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/Mol2FileParser.cpp:37:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/Mol2FileParser.cpp:37:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDGeom::Point3D&}; _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:14:
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h: In function 'std::string RDKit::SGroupWriting::BuildV2000SAPLines(int, const RDKit::SubstanceGroup&)':
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:25: warning: '%3d' directive output may be truncated writing between 3 and 11 bytes into a region of size 4 [-Wformat-truncation=]
   24 |   snprintf(output, 5, " %3d", value);
      |                         ^~~
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:23: note: directive argument in the range [-2147483647, 2147483647]
   24 |   snprintf(output, 5, " %3d", value);
      |                       ^~~~~~
In file included from /usr/include/stdio.h:867,
                 from /usr/include/c++/9/cstdio:42,
                 from /usr/include/c++/9/ext/string_conversions.h:43,
                 from /usr/include/c++/9/bits/basic_string.h:6493,
                 from /usr/include/c++/9/string:55,
                 from /usr/include/c++/9/bits/locale_classes.h:40,
                 from /usr/include/c++/9/bits/ios_base.h:41,
                 from /usr/include/c++/9/ios:42,
                 from /usr/include/c++/9/ostream:38,
                 from /usr/include/c++/9/iterator:64,
                 from /usr/include/boost/iterator/iterator_traits.hpp:10,
                 from /usr/include/boost/range/mutable_iterator.hpp:23,
                 from /usr/include/boost/range/iterator.hpp:20,
                 from /usr/include/boost/range/begin.hpp:24,
                 from /usr/include/boost/algorithm/string/detail/sequence.hpp:17,
                 from /usr/include/boost/algorithm/string/join.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:11:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 13 bytes into a destination of size 5
   67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   68 |        __bos (__s), __fmt, __va_arg_pack ());
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:14:
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h: In function 'std::string RDKit::SGroupWriting::BuildV2000SNCLines(const RDKit::ROMol&)':
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:25: warning: '%3d' directive output may be truncated writing between 3 and 9 bytes into a region of size 4 [-Wformat-truncation=]
   24 |   snprintf(output, 5, " %3d", value);
      |                         ^~~
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:23: note: directive argument in the range [-23342212, 23342214]
   24 |   snprintf(output, 5, " %3d", value);
      |                       ^~~~~~
In file included from /usr/include/stdio.h:867,
                 from /usr/include/c++/9/cstdio:42,
                 from /usr/include/c++/9/ext/string_conversions.h:43,
                 from /usr/include/c++/9/bits/basic_string.h:6493,
                 from /usr/include/c++/9/string:55,
                 from /usr/include/c++/9/bits/locale_classes.h:40,
                 from /usr/include/c++/9/bits/ios_base.h:41,
                 from /usr/include/c++/9/ios:42,
                 from /usr/include/c++/9/ostream:38,
                 from /usr/include/c++/9/iterator:64,
                 from /usr/include/boost/iterator/iterator_traits.hpp:10,
                 from /usr/include/boost/range/mutable_iterator.hpp:23,
                 from /usr/include/boost/range/iterator.hpp:20,
                 from /usr/include/boost/range/begin.hpp:24,
                 from /usr/include/boost/algorithm/string/detail/sequence.hpp:17,
                 from /usr/include/boost/algorithm/string/join.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:11:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 5
   67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   68 |        __bos (__s), __fmt, __va_arg_pack ());
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:14:
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h: In function 'std::string RDKit::SGroupWriting::BuildV2000SLBLines(const RDKit::ROMol&)':
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:25: warning: '%3d' directive output may be truncated writing between 3 and 9 bytes into a region of size 4 [-Wformat-truncation=]
   24 |   snprintf(output, 5, " %3d", value);
      |                         ^~~
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:23: note: directive argument in the range [-23342212, 23342214]
   24 |   snprintf(output, 5, " %3d", value);
      |                       ^~~~~~
In file included from /usr/include/stdio.h:867,
                 from /usr/include/c++/9/cstdio:42,
                 from /usr/include/c++/9/ext/string_conversions.h:43,
                 from /usr/include/c++/9/bits/basic_string.h:6493,
                 from /usr/include/c++/9/string:55,
                 from /usr/include/c++/9/bits/locale_classes.h:40,
                 from /usr/include/c++/9/bits/ios_base.h:41,
                 from /usr/include/c++/9/ios:42,
                 from /usr/include/c++/9/ostream:38,
                 from /usr/include/c++/9/iterator:64,
                 from /usr/include/boost/iterator/iterator_traits.hpp:10,
                 from /usr/include/boost/range/mutable_iterator.hpp:23,
                 from /usr/include/boost/range/iterator.hpp:20,
                 from /usr/include/boost/range/begin.hpp:24,
                 from /usr/include/boost/algorithm/string/detail/sequence.hpp:17,
                 from /usr/include/boost/algorithm/string/join.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:11:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 5
   67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   68 |        __bos (__s), __fmt, __va_arg_pack ());
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:14:
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h: In function 'std::string RDKit::SGroupWriting::BuildV2000SPLLines(const RDKit::ROMol&)':
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:25: warning: '%3d' directive output may be truncated writing between 3 and 9 bytes into a region of size 4 [-Wformat-truncation=]
   24 |   snprintf(output, 5, " %3d", value);
      |                         ^~~
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h:24:23: note: directive argument in the range [-23342212, 23342214]
   24 |   snprintf(output, 5, " %3d", value);
      |                       ^~~~~~
In file included from /usr/include/stdio.h:867,
                 from /usr/include/c++/9/cstdio:42,
                 from /usr/include/c++/9/ext/string_conversions.h:43,
                 from /usr/include/c++/9/bits/basic_string.h:6493,
                 from /usr/include/c++/9/string:55,
                 from /usr/include/c++/9/bits/locale_classes.h:40,
                 from /usr/include/c++/9/bits/ios_base.h:41,
                 from /usr/include/c++/9/ios:42,
                 from /usr/include/c++/9/ostream:38,
                 from /usr/include/c++/9/iterator:64,
                 from /usr/include/boost/iterator/iterator_traits.hpp:10,
                 from /usr/include/boost/range/mutable_iterator.hpp:23,
                 from /usr/include/boost/range/iterator.hpp:20,
                 from /usr/include/boost/range/begin.hpp:24,
                 from /usr/include/boost/algorithm/string/detail/sequence.hpp:17,
                 from /usr/include/boost/algorithm/string/join.hpp:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.cpp:11:
/usr/include/arm-linux-gnueabihf/bits/stdio2.h:67:35: note: '__builtin___snprintf_chk' output between 5 and 11 bytes into a destination of size 5
   67 |   return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1,
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
   68 |        __bos (__s), __fmt, __va_arg_pack ());
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/Mol2FileParser.cpp:37:
/usr/include/c++/9/bits/stl_vector.h: In function 'RDKit::RWMol* RDKit::Mol2DataStreamToMol(std::istream*, bool, bool, RDKit::Mol2Type, bool)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 53%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolFileStereochem.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/MolFileStereochem.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileStereochem.cpp
[ 53%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolFileWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/MolFileWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileWriter.cpp
[ 53%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/ForwardSDMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/ForwardSDMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/ForwardSDMolSupplier.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileParser.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileParser.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileParser.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileStereochem.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileStereochem.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In function 'void RDKit::ClearSingleBondDirFlags(RDKit::ROMol&)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 53%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SDMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/SDMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SDMolSupplier.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/ForwardSDMolSupplier.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileParser.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In function 'bool RDKit::FileParserUtils::ParseV2000CTAB(std::istream*, unsigned int&, RDKit::RWMol*, RDKit::Conformer*&, bool&, unsigned int&, unsigned int&, bool)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileWriter.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<unsigned int, RDGeom::Point3D>}; _Tp = std::pair<unsigned int, RDGeom::Point3D>; _Alloc = std::allocator<std::pair<unsigned int, RDGeom::Point3D> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::pair<unsigned int, RDGeom::Point3D> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:17,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileWriter.cpp:13:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<Rankers::pairLess<unsigned int, RDGeom::Point3D> >]':
/usr/include/c++/9/bits/stl_algo.h:1820:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
 1820 |     __unguarded_linear_insert(_RandomAccessIterator __last,
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairLess<unsigned int, RDGeom::Point3D> >]':
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
 1839 |     __insertion_sort(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1839:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
[ 53%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SDWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/SDWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SDWriter.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SDMolSupplier.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::fpos<__mbstate_t>&}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function 'void RDKit::{anonymous}::ParseV3000AtomBlock(std::istream*, unsigned int&, unsigned int, RDKit::RWMol*, RDKit::Conformer*)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SDMolSupplier.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual RDKit::ROMol* RDKit::SDMolSupplier::next()':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In member function 'unsigned int RDKit::SDMolSupplier::length()':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In member function 'void RDKit::SDMolSupplier::moveTo(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/bits/stl_algo.h:61,
                 from /usr/include/c++/9/algorithm:62,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:17,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileWriter.cpp:13:
/usr/include/c++/9/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >; _Distance = int; _Tp = std::pair<unsigned int, RDGeom::Point3D>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairLess<unsigned int, RDGeom::Point3D> >]':
/usr/include/c++/9/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
  214 |     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
      |     ^~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:17,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileWriter.cpp:13:
/usr/include/c++/9/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairLess<unsigned int, RDGeom::Point3D> >]':
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
 1939 |     __introsort_loop(_RandomAccessIterator __first,
      |     ^~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1939:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:1953:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
 1953 |    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 54%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SmilesMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/SmilesMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SmilesMolSupplier.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileWriter.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In function 'void RDKit::GetMolFileAtomProperties(const RDKit::Atom*, const RDKit::Conformer*, int&, int&, unsigned int&, double&, double&, double&)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/algorithm:62,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:17,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Invariant.h:22,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileWriter.cpp:13:
/usr/include/c++/9/bits/stl_algo.h:1967:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
 1967 |    std::__introsort_loop(__first, __last,
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
 1968 |     std::__lg(__last - __first) * 2,
      |     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 1969 |     __comp);
      |     ~~~~~~~              
/usr/include/c++/9/bits/stl_algo.h:1884:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
 1884 |    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
      |    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:1889:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
 1889 |  std::__insertion_sort(__first, __last, __comp);
      |  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 54%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SmilesWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/SmilesWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SmilesWriter.cpp
[ 54%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TDTMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/TDTMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TDTMolSupplier.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SmilesMolSupplier.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 54%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TDTWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/TDTWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TDTWriter.cpp
[ 54%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TplFileParser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/TplFileParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TplFileParser.cpp
[ 54%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TplFileWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/TplFileWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TplFileWriter.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/token_functions.hpp:34,
                 from /usr/include/boost/token_iterator.hpp:24,
                 from /usr/include/boost/tokenizer.hpp:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TDTMolSupplier.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/token_functions.hpp:34,
                 from /usr/include/boost/token_iterator.hpp:24,
                 from /usr/include/boost/tokenizer.hpp:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TDTMolSupplier.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/token_functions.hpp:34,
                 from /usr/include/boost/token_iterator.hpp:24,
                 from /usr/include/boost/tokenizer.hpp:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TDTMolSupplier.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In function 'void RDKit::TDTParseUtils::ParseNumberList(std::string, std::vector<T>&, std::istream*) [with T = double]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/token_functions.hpp:34,
                 from /usr/include/boost/token_iterator.hpp:24,
                 from /usr/include/boost/tokenizer.hpp:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TDTMolSupplier.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In member function 'RDKit::ROMol* RDKit::TDTMolSupplier::parseMol(std::string)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TplFileParser.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TplFileParser.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TplFileParser.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 55%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/PDBParser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/PDBParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/PDBParser.cpp
[ 55%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/PDBWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/PDBWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/PDBWriter.cpp
[ 55%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/PDBSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/PDBSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/PDBSupplier.cpp
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/TplFileParser.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In function 'void RDKit::ParseTPLAtomLine(std::string, unsigned int, RDKit::RWMol*, RDKit::Conformer*)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function 'RDKit::Conformer* RDKit::ParseConfData(std::istream*, unsigned int&, RDKit::RWMol*, unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 55%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/XYZFileWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/XYZFileWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/XYZFileWriter.cpp
[ 55%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MaeMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/MaeMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MaeMolSupplier.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/PDBParser.cpp:16:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/PDBParser.cpp:16:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/PDBParser.cpp:16:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/PDBParser.cpp:16:
/usr/include/c++/9/bits/stl_vector.h: In function 'void RDKit::PDBConformerLine(RDKit::RWMol*, const char*, unsigned int, RDKit::Conformer*&, int&)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function 'void RDKit::PDBAtomLine(RDKit::RWMol*, const char*, unsigned int, unsigned int, std::map<int, RDKit::Atom*>&)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 55%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/ProximityBonds.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/ProximityBonds.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/ProximityBonds.cpp
[ 55%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SequenceParsers.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/SequenceParsers.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SequenceParsers.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MaeMolSupplier.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MaeMolSupplier.cpp:13:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 56%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SequenceWriters.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/SequenceWriters.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SequenceWriters.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MaeMolSupplier.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MaeMolSupplier.cpp:13:
/usr/include/c++/9/bits/stl_vector.h: In function 'void RDKit::addAtoms(std::shared_ptr<schrodinger::mae::Block>&, RDKit::RWMol&)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/BadFileException.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MaeMolSupplier.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'virtual RDKit::ROMol* RDKit::MaeMolSupplier::next()':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 56%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SVGParser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FileParsers.dir/SVGParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SVGParser.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SequenceParsers.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In function 'RDKit::RWMol* RDKit::FASTAToMol(const char*, bool, int)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SVGParser.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SVGParser.cpp:10:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SVGParser.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDGeom::Point3D&}; _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SVGParser.cpp:10:
/usr/include/c++/9/bits/stl_vector.h: In function 'RDKit::RWMol* RDKit::RDKitSVGToMol(std::istream*, bool, bool)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 56%] Linking CXX shared library ../../../lib/libRDKitFileParsers.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/FileParsers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitFileParsers.so.1 -o ../../../lib/libRDKitFileParsers.so.1.2019.09.1 CMakeFiles/FileParsers.dir/Mol2FileParser.cpp.o CMakeFiles/FileParsers.dir/MolFileParser.cpp.o CMakeFiles/FileParsers.dir/MolSGroupParsing.cpp.o CMakeFiles/FileParsers.dir/MolSGroupWriting.cpp.o CMakeFiles/FileParsers.dir/MolFileStereochem.cpp.o CMakeFiles/FileParsers.dir/MolFileWriter.cpp.o CMakeFiles/FileParsers.dir/ForwardSDMolSupplier.cpp.o CMakeFiles/FileParsers.dir/SDMolSupplier.cpp.o CMakeFiles/FileParsers.dir/SDWriter.cpp.o CMakeFiles/FileParsers.dir/SmilesMolSupplier.cpp.o CMakeFiles/FileParsers.dir/SmilesWriter.cpp.o CMakeFiles/FileParsers.dir/TDTMolSupplier.cpp.o CMakeFiles/FileParsers.dir/TDTWriter.cpp.o CMakeFiles/FileParsers.dir/TplFileParser.cpp.o CMakeFiles/FileParsers.dir/TplFileWriter.cpp.o CMakeFiles/FileParsers.dir/PDBParser.cpp.o CMakeFiles/FileParsers.dir/PDBWriter.cpp.o CMakeFiles/FileParsers.dir/PDBSupplier.cpp.o CMakeFiles/FileParsers.dir/XYZFileWriter.cpp.o CMakeFiles/FileParsers.dir/MaeMolSupplier.cpp.o CMakeFiles/FileParsers.dir/ProximityBonds.cpp.o CMakeFiles/FileParsers.dir/SequenceParsers.cpp.o CMakeFiles/FileParsers.dir/SequenceWriters.cpp.o CMakeFiles/FileParsers.dir/SVGParser.cpp.o  ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1 ../../../lib/libRDKitFileParsers.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 56%] Built target FileParsers
make -f External/CoordGen/CMakeFiles/testCoordGen.dir/build.make External/CoordGen/CMakeFiles/testCoordGen.dir/depend
make -f Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build.make Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/depend
make -f Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/build.make Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/depend
make -f Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/External/CoordGen /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/CMakeFiles/testCoordGen.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ForceField/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ForceField/UFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/UFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/DependInfo.cmake --color=
Scanning dependencies of target testCoordGen
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f External/CoordGen/CMakeFiles/testCoordGen.dir/build.make External/CoordGen/CMakeFiles/testCoordGen.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Scanning dependencies of target testUFFForceField
Scanning dependencies of target testMMFFForceField
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build.make Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/build.make Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 56%] Building CXX object External/CoordGen/CMakeFiles/testCoordGen.dir/test.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DIN_COORDGEN -DIN_MAEPARSER -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testCoordGen.dir/test.cpp.o -c /<<PKGBUILDDIR>>/External/CoordGen/test.cpp
Scanning dependencies of target graphmolTestsCatch
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build
[ 56%] Building CXX object Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/testUFFForceField.cpp.o
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/UFF && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testUFFForceField.dir/testUFFForceField.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/UFF/testUFFForceField.cpp
[ 56%] Building CXX object Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/testMMFFForceField.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/MMFF && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testMMFFForceField.dir/testMMFFForceField.cpp.o -c /<<PKGBUILDDIR>>/Code/ForceField/MMFF/testMMFFForceField.cpp
[ 56%] Building CXX object Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/graphmolTestsCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/catch_tests.cpp
/<<PKGBUILDDIR>>/Code/GraphMol/catch_tests.cpp: In function 'void ____C_A_T_C_H____T_E_S_T____45()':
/<<PKGBUILDDIR>>/Code/GraphMol/catch_tests.cpp:350:14: warning: unused variable 'm' [-Wunused-variable]
  350 |         auto m = SmilesToMol(pr.first);
      |              ^
/<<PKGBUILDDIR>>/Code/GraphMol/catch_tests.cpp:363:14: warning: unused variable 'm' [-Wunused-variable]
  363 |         auto m = SmilesToMol(pr.first);
      |              ^
/<<PKGBUILDDIR>>/Code/GraphMol/catch_tests.cpp:376:14: warning: unused variable 'm' [-Wunused-variable]
  376 |         auto m = SmilesToMol(pr.first);
      |              ^
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/External/CoordGen/test.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/External/CoordGen/test.cpp:13:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/External/CoordGen/test.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/External/CoordGen/test.cpp:13:
/usr/include/c++/9/bits/stl_vector.h: In function 'unsigned int RDKit::CoordGen::addCoords(T&, const RDKit::CoordGen::CoordGenParams*) [with T = RDKit::ROMol]':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/External/CoordGen/test.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, const char*)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/ForceField/MMFF/testMMFFForceField.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In function 'void testMMFFTorsionConstraints()':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 56%] Linking CXX executable testCoordGen
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen && /usr/bin/cmake -E cmake_link_script CMakeFiles/testCoordGen.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testCoordGen.dir/test.cpp.o  -o testCoordGen  -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../lib/libRDKitDepictor.so.1.2019.09.1 ../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../lib/libRDKitAlignment.so.1.2019.09.1 ../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../lib/libRDKitForceField.so.1.2019.09.1 ../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 56%] Built target testCoordGen
make -f Code/GraphMol/CMakeFiles/graphmolTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolTest1.dir/DependInfo.cmake --color=
Scanning dependencies of target graphmolTest1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolTest1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 56%] Building CXX object Code/GraphMol/CMakeFiles/graphmolTest1.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/graphmolTest1.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/test1.cpp
[ 56%] Linking CXX executable testUFFForceField
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/UFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testUFFForceField.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testUFFForceField.dir/testUFFForceField.cpp.o  -o testUFFForceField  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 56%] Built target testUFFForceField
make -f Code/GraphMol/CMakeFiles/hanoiTest.dir/build.make Code/GraphMol/CMakeFiles/hanoiTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/hanoiTest.dir/DependInfo.cmake --color=
Scanning dependencies of target hanoiTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/hanoiTest.dir/build.make Code/GraphMol/CMakeFiles/hanoiTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 56%] Building CXX object Code/GraphMol/CMakeFiles/hanoiTest.dir/hanoitest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/hanoiTest.dir/hanoitest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/hanoitest.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/new_canon.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/hanoitest.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/test1.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/test1.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In member function 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/test1.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, const char*)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 56%] Linking CXX executable testMMFFForceField
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/MMFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMMFFForceField.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMMFFForceField.dir/testMMFFForceField.cpp.o  -o testMMFFForceField  ../../../lib/libRDKitDistGeomHelpers.so.1.2019.09.1 ../../../lib/libRDKitDistGeometry.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 56%] Built target testMMFFForceField
make -f Code/GraphMol/CMakeFiles/testSGroup.dir/build.make Code/GraphMol/CMakeFiles/testSGroup.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/testSGroup.dir/DependInfo.cmake --color=
Scanning dependencies of target testSGroup
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/testSGroup.dir/build.make Code/GraphMol/CMakeFiles/testSGroup.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 56%] Building CXX object Code/GraphMol/CMakeFiles/testSGroup.dir/testSGroup.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testSGroup.dir/testSGroup.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/testSGroup.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/catch_tests.cpp:3:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/catch_tests.cpp:3:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 56%] Linking CXX executable hanoiTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/hanoiTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/hanoiTest.dir/hanoitest.cpp.o  -o hanoiTest  ../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../lib/libRDKitDepictor.so.1.2019.09.1 ../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../lib/libRDKitAlignment.so.1.2019.09.1 ../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitForceField.so.1.2019.09.1 ../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 56%] Built target hanoiTest
make -f Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/DependInfo.cmake --color=
Scanning dependencies of target graphmoltestPicklerGlobalSetting
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 56%] Building CXX object Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/testPicklerGlobalSettings.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/graphmoltestPicklerGlobalSetting.dir/testPicklerGlobalSettings.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/testPicklerGlobalSettings.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/catch_tests.cpp:3:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/catch_tests.cpp:3:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/catch_tests.cpp:3:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/testSGroup.cpp:14:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/testPicklerGlobalSettings.cpp:33:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 56%] Linking CXX executable graphmolTest1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolTest1.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/graphmolTest1.dir/test1.cpp.o  -o graphmolTest1  ../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../lib/libRDKitDepictor.so.1.2019.09.1 ../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../lib/libRDKitForceField.so.1.2019.09.1 ../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../lib/libRDKitAlignment.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 56%] Built target graphmolTest1
make -f Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/DependInfo.cmake --color=
Scanning dependencies of target graphmolMolOpsTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 56%] Building CXX object Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/molopstest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/graphmolMolOpsTest.dir/molopstest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/molopstest.cpp
[ 57%] Linking CXX executable testSGroup
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSGroup.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testSGroup.dir/testSGroup.cpp.o  -o testSGroup  ../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../lib/libRDKitDepictor.so.1.2019.09.1 ../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../lib/libRDKitAlignment.so.1.2019.09.1 ../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../lib/libRDKitForceField.so.1.2019.09.1 ../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Built target testSGroup
make -f Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/DependInfo.cmake --color=
Scanning dependencies of target graphmoltestChirality
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Building CXX object Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/testChirality.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/graphmoltestChirality.dir/testChirality.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/testChirality.cpp
[ 57%] Linking CXX executable graphmoltestPicklerGlobalSetting
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmoltestPicklerGlobalSetting.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/graphmoltestPicklerGlobalSetting.dir/testPicklerGlobalSettings.cpp.o  -o graphmoltestPicklerGlobalSetting  ../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../lib/libRDKitDepictor.so.1.2019.09.1 ../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../lib/libRDKitAlignment.so.1.2019.09.1 ../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../lib/libRDKitForceField.so.1.2019.09.1 ../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 57%] Built target graphmoltestPicklerGlobalSetting
make -f Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/DependInfo.cmake --color=
Scanning dependencies of target graphmoltestPickler
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Building CXX object Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/testPickler.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/graphmoltestPickler.dir/testPickler.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/testPickler.cpp
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/catch_tests.cpp:3:
/usr/include/c++/9/bits/stl_vector.h: In function 'void ____C_A_T_C_H____T_E_S_T____35()':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/catch_tests.cpp:3:
/usr/include/c++/9/bits/vector.tcc: In function 'void ____C_A_T_C_H____T_E_S_T____7()':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/testPickler.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/testPickler.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/testPickler.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/molopstest.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/molopstest.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In member function 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/molopstest.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
[ 58%] Linking CXX executable graphmoltestPickler
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmoltestPickler.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/graphmoltestPickler.dir/testPickler.cpp.o  -o graphmoltestPickler  ../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../lib/libRDKitDepictor.so.1.2019.09.1 ../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../lib/libRDKitAlignment.so.1.2019.09.1 ../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../lib/libRDKitForceField.so.1.2019.09.1 ../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Built target graphmoltestPickler
make -f Code/GraphMol/CMakeFiles/molBundleTest.dir/build.make Code/GraphMol/CMakeFiles/molBundleTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/molBundleTest.dir/DependInfo.cmake --color=
Scanning dependencies of target molBundleTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/molBundleTest.dir/build.make Code/GraphMol/CMakeFiles/molBundleTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Building CXX object Code/GraphMol/CMakeFiles/molBundleTest.dir/testMolBundle.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/molBundleTest.dir/testMolBundle.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/testMolBundle.cpp
[ 58%] Linking CXX executable graphmoltestChirality
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmoltestChirality.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/graphmoltestChirality.dir/testChirality.cpp.o  -o graphmoltestChirality  ../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../lib/libRDKitDepictor.so.1.2019.09.1 ../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../lib/libRDKitAlignment.so.1.2019.09.1 ../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../lib/libRDKitForceField.so.1.2019.09.1 ../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Built target graphmoltestChirality
make -f Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/build.make Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/DependInfo.cmake --color=
Scanning dependencies of target resMolSupplierTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/build.make Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Building CXX object Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/resMolSupplierTest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/resMolSupplierTest.dir/resMolSupplierTest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/resMolSupplierTest.cpp
[ 58%] Linking CXX executable molBundleTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/molBundleTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/molBundleTest.dir/testMolBundle.cpp.o  -o molBundleTest  ../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../lib/libRDKitDepictor.so.1.2019.09.1 ../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../lib/libRDKitAlignment.so.1.2019.09.1 ../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../lib/libRDKitForceField.so.1.2019.09.1 ../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Built target molBundleTest
make -f Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Depictor /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/DependInfo.cmake --color=
Scanning dependencies of target testDepictor
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/molopstest.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In function 'void testIssue212()':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 58%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/testDepictor.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/c++  -DIN_COORDGEN -DRDKIT_DEPICTOR_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testDepictor.dir/testDepictor.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp
/usr/include/c++/9/bits/stl_vector.h: In function 'void testAddConformers()':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 58%] Linking CXX executable graphmolTestsCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolTestsCatch.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/graphmolTestsCatch.dir/catch_tests.cpp.o  -o graphmolTestsCatch  ../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../lib/libRDKitDepictor.so.1.2019.09.1 ../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../lib/libRDKitAlignment.so.1.2019.09.1 ../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitForceField.so.1.2019.09.1 ../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Built target graphmolTestsCatch
make -f Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build.make Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/DependInfo.cmake --color=
Scanning dependencies of target rdDepictor
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build.make Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Building CXX object Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/rdDepictor.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap && /usr/bin/c++  -DIN_COORDGEN -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdDepictor_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdDepictor.dir/rdDepictor.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/Wrap/rdDepictor.cpp
/usr/include/c++/9/bits/stl_vector.h: In function 'void testAddHsCoords()':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/set:60,
                 from /<<PKGBUILDDIR>>/Code/Query/SetQuery.h:13,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:13:
/usr/include/c++/9/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_erase_aux(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator) [with _Key = int; _Val = std::pair<const int, RDGeom::Point2D>; _KeyOfValue = std::_Select1st<std::pair<const int, RDGeom::Point2D> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]':
/usr/include/c++/9/bits/stl_tree.h:2504:5: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
 2504 |     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/Wrap/rdDepictor.cpp:18:
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h: In member function 'RDDepict::EmbeddedAtom RDDepict::EmbeddedFrag::GetEmbeddedAtom(unsigned int) const':
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h:314:18: warning: implicitly-declared 'RDDepict::EmbeddedAtom::EmbeddedAtom(const RDDepict::EmbeddedAtom&)' is deprecated [-Wdeprecated-copy]
  314 |     return posi->second;
      |                  ^~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/EmbeddedFrag.h:59:17: note: because 'RDDepict::EmbeddedAtom' has user-provided 'RDDepict::EmbeddedAtom& RDDepict::EmbeddedAtom::operator=(const RDDepict::EmbeddedAtom&)'
   59 |   EmbeddedAtom &operator=(const EmbeddedAtom &other) {
      |                 ^~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/Wrap/rdDepictor.cpp:17:
/<<PKGBUILDDIR>>/Code/Geometry/point.h: In function 'unsigned int RDDepict::Compute2DCoords(RDKit::ROMol&, bool, bool, boost::python::dict&, unsigned int, unsigned int, int, bool, double, bool)':
/<<PKGBUILDDIR>>/Code/Geometry/point.h:293:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point2D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
  293 |     x = other.x;
      |         ~~~~~~^
[ 58%] Linking CXX executable resMolSupplierTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/resMolSupplierTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/resMolSupplierTest.dir/resMolSupplierTest.cpp.o  -o resMolSupplierTest  ../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../lib/libRDKitDepictor.so.1.2019.09.1 ../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../lib/libRDKitAlignment.so.1.2019.09.1 ../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../lib/libRDKitForceField.so.1.2019.09.1 ../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
/usr/include/c++/9/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDGeom::Point2D>; _KeyOfValue = std::_Select1st<std::pair<const int, RDGeom::Point2D> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:26,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:13:
/usr/include/c++/9/bits/stl_map.h: In function 'void testIssue2091304()':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In function 'void testIssue3122141()':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In function 'void testIssue2303566()':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In function 'void testIssue3135833()':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Built target resMolSupplierTest
make -f Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/DependInfo.cmake --color=
/usr/include/c++/9/bits/stl_map.h: In function 'void test4()':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/9/set:60,
                 from /<<PKGBUILDDIR>>/Code/Query/SetQuery.h:13,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:13:
/usr/include/c++/9/bits/stl_tree.h:1220:2: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
 1220 |  _M_erase_aux(__position);
      |  ^~~~~~~~~~~~
/usr/include/c++/9/bits/stl_tree.h:1220:2: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
 1220 |  _M_erase_aux(__position);
      |  ^~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:26,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:13:
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
Scanning dependencies of target cxsmilesTest
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
In file included from /usr/include/c++/9/set:60,
                 from /<<PKGBUILDDIR>>/Code/Query/SetQuery.h:13,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/testDepictor.cpp:13:
/usr/include/c++/9/bits/stl_tree.h:1220:2: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
 1220 |  _M_erase_aux(__position);
      |  ^~~~~~~~~~~~
make -f Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/cxsmiles_test.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/cxsmilesTest.dir/cxsmiles_test.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/cxsmiles_test.cpp
[ 59%] Linking CXX shared module ../../../../rdkit/Chem/rdDepictor.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdDepictor.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdDepictor.so CMakeFiles/rdDepictor.dir/rdDepictor.cpp.o  ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 59%] Built target rdDepictor
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/DependInfo.cmake --color=
Scanning dependencies of target smiTestCatch
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 59%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/smiTestCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/catch_tests.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/molopstest.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::Dict::setPODVal(const string&, T) [with T = int]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 59%] Linking CXX executable testDepictor
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDepictor.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testDepictor.dir/testDepictor.cpp.o  -o testDepictor  ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 59%] Built target testDepictor
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/DependInfo.cmake --color=
Scanning dependencies of target smiTest1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 59%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/test.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/smiTest1.dir/test.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/test.cpp
[ 59%] Linking CXX executable cxsmilesTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/cxsmilesTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/cxsmilesTest.dir/cxsmiles_test.cpp.o  -o cxsmilesTest  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 59%] Built target cxsmilesTest
make -f Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/DependInfo.cmake --color=
Scanning dependencies of target testMol2ToMol
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 59%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/testMol2ToMol.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testMol2ToMol.dir/testMol2ToMol.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMol2ToMol.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/test.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
[ 59%] Linking CXX executable testMol2ToMol
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMol2ToMol.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMol2ToMol.dir/testMol2ToMol.cpp.o  -o testMol2ToMol  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 59%] Built target testMol2ToMol
make -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/DependInfo.cmake --color=
Scanning dependencies of target fileParsersTest1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 60%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/fileParsersTest1.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/test1.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/catch_tests.cpp:14:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/catch_tests.cpp:14:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/test1.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/test1.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In member function 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/test1.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 61%] Linking CXX executable graphmolMolOpsTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolMolOpsTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/graphmolMolOpsTest.dir/molopstest.cpp.o  -o graphmolMolOpsTest  ../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../lib/libRDKitDepictor.so.1.2019.09.1 ../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../lib/libRDKitAlignment.so.1.2019.09.1 ../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../lib/libRDKitForceField.so.1.2019.09.1 ../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 61%] Built target graphmolMolOpsTest
make -f Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/DependInfo.cmake --color=
Scanning dependencies of target testPropertyLists
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 61%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/testPropertyLists.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testPropertyLists.dir/testPropertyLists.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testPropertyLists.cpp
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/test1.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In function 'void testIssue2963522()':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, const char*)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In function 'void testBug3525799()':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 61%] Linking CXX executable smiTest1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/smiTest1.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/smiTest1.dir/test.cpp.o  -o smiTest1  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 61%] Built target smiTest1
make -f Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/DependInfo.cmake --color=
Scanning dependencies of target testMolSupplier
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 61%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/testMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testMolSupplier.dir/testMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMolSupplier.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testPropertyLists.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testPropertyLists.cpp:13:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testPropertyLists.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMolSupplier.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::fpos<__mbstate_t>&}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In function 'void testGitHub23()':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMolSupplier.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In function 'void testSetStreamIndices()':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 62%] Linking CXX executable testMolSupplier
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolSupplier.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMolSupplier.dir/testMolSupplier.cpp.o  -o testMolSupplier  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitRDStreams.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Built target testMolSupplier
make -f Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/DependInfo.cmake --color=
Scanning dependencies of target testMolWriter
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/testMolWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testMolWriter.dir/testMolWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMolWriter.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMolWriter.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMolWriter.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMolWriter.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 62%] Linking CXX executable fileParsersTest1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/fileParsersTest1.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/fileParsersTest1.dir/test1.cpp.o  -o fileParsersTest1  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Built target fileParsersTest1
make -f Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/DependInfo.cmake --color=
Scanning dependencies of target testTplParser
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/testTpls.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testTplParser.dir/testTpls.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testTpls.cpp
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testMolWriter.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In function 'void testIssue265()':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 62%] Linking CXX executable testMolWriter
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolWriter.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMolWriter.dir/testMolWriter.cpp.o  -o testMolWriter  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Built target testMolWriter
make -f Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/DependInfo.cmake --color=
Scanning dependencies of target testSequence
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/testSequence.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testSequence.dir/testSequence.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testSequence.cpp
[ 62%] Linking CXX executable testTplParser
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testTplParser.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testTplParser.dir/testTpls.cpp.o  -o testTplParser  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Built target testTplParser
make -f Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/DependInfo.cmake --color=
Scanning dependencies of target testExtendedStereoParsing
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/testExtendedStereoParsing.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testExtendedStereoParsing.dir/testExtendedStereoParsing.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/testExtendedStereoParsing.cpp
[ 62%] Linking CXX executable testSequence
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSequence.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testSequence.dir/testSequence.cpp.o  -o testSequence  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Built target testSequence
make -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/DependInfo.cmake --color=
Scanning dependencies of target fileParsersCatchTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DBOOST_IOSTREAMS_DYN_LINK -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_IOSTREAMS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/fileParsersCatchTest.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/catch_tests.cpp
[ 62%] Linking CXX executable testExtendedStereoParsing
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testExtendedStereoParsing.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testExtendedStereoParsing.dir/testExtendedStereoParsing.cpp.o  -o testExtendedStereoParsing  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Built target testExtendedStereoParsing
make -f Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/DependInfo.cmake --color=
Scanning dependencies of target substructTestCatch
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Building CXX object Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBSTRUCTMATCH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/substructTestCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/catch_tests.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/catch_tests.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/catch_tests.cpp:13:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/catch_tests.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/catch_tests.cpp:13:
/usr/include/c++/9/bits/stl_vector.h: In member function 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/catch_tests.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/catch_tests.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/catch_tests.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 62%] Linking CXX executable smiTestCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/smiTestCatch.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/smiTestCatch.dir/catch_tests.cpp.o  -o smiTestCatch  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Built target smiTestCatch
make -f Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/DependInfo.cmake --color=
Scanning dependencies of target testSubstructMatch
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Building CXX object Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBSTRUCTMATCH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testSubstructMatch.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/test1.cpp
/usr/include/c++/9/bits/vector.tcc: In function 'void ____C_A_T_C_H____T_E_S_T____38()':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Substruct/test1.cpp:17:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In function 'void test5QueryRoot()':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 62%] Linking CXX executable testSubstructMatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSubstructMatch.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testSubstructMatch.dir/test1.cpp.o  -o testSubstructMatch  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Built target testSubstructMatch
make -f Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/DependInfo.cmake --color=
Scanning dependencies of target Descriptors
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/Crippen.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Descriptors.dir/Crippen.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Crippen.cpp
[ 62%] Linking CXX executable substructTestCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/cmake -E cmake_link_script CMakeFiles/substructTestCatch.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/substructTestCatch.dir/catch_tests.cpp.o  -o substructTestCatch  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Built target substructTestCatch
make -f Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/DependInfo.cmake --color=
Scanning dependencies of target chemTransformsTestCatch
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make -f Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 63%] Building CXX object Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/c++  -DRDKIT_CHEMTRANSFORMS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/chemTransformsTestCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/catch_tests.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Crippen.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDKit::Descriptors::CrippenParams&}; _Tp = RDKit::Descriptors::CrippenParams; _Alloc = std::allocator<RDKit::Descriptors::CrippenParams>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Descriptors::CrippenParams>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Descriptors::CrippenParams*, std::vector<RDKit::Descriptors::CrippenParams> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Crippen.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Descriptors::CrippenParamCollection::CrippenParamCollection(const string&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Descriptors::CrippenParams*, std::vector<RDKit::Descriptors::CrippenParams> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 64%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MolDescriptors.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Descriptors.dir/MolDescriptors.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MolDescriptors.cpp
[ 64%] Linking CXX executable testPropertyLists
[ 64%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MolSurf.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Descriptors.dir/MolSurf.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MolSurf.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testPropertyLists.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testPropertyLists.dir/testPropertyLists.cpp.o  -o testPropertyLists  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 64%] Built target testPropertyLists
make -f Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/DependInfo.cmake --color=
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/catch_tests.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/catch_tests.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
Scanning dependencies of target testChemTransforms
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 64%] Building CXX object Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/testChemTransforms.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/c++  -DRDKIT_CHEMTRANSFORMS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testChemTransforms.dir/testChemTransforms.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/testChemTransforms.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MolSurf.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/testChemTransforms.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
[ 64%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/Lipinski.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Descriptors.dir/Lipinski.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Lipinski.cpp
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, const char*)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 64%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/ConnectivityDescriptors.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Descriptors.dir/ConnectivityDescriptors.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/ConnectivityDescriptors.cpp
[ 64%] Linking CXX executable testChemTransforms
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/cmake -E cmake_link_script CMakeFiles/testChemTransforms.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testChemTransforms.dir/testChemTransforms.cpp.o  -o testChemTransforms  ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 64%] Built target testChemTransforms
make -f Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/DependInfo.cmake --color=
Scanning dependencies of target filterCatalogTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 64%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/filtercatalogtest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/filterCatalogTest.dir/filtercatalogtest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/filtercatalogtest.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:27,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/ConnectivityDescriptors.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/filtercatalogtest.cpp:33:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, const char*)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 64%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MQN.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Descriptors.dir/MQN.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MQN.cpp
/usr/include/c++/9/bits/vector.tcc: In function 'void testFilterCatalogEntry()':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 64%] Linking CXX executable filterCatalogTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/filterCatalogTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/filterCatalogTest.dir/filtercatalogtest.cpp.o  -o filterCatalogTest  ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 -lboost_serialization ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
[ 64%] Linking CXX executable fileParsersCatchTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/fileParsersCatchTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/fileParsersCatchTest.dir/catch_tests.cpp.o  -o fileParsersCatchTest  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 64%] Built target filterCatalogTest
make -f Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build.make Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/DependInfo.cmake --color=
Scanning dependencies of target rdfiltercatalog
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build.make Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 64%] Building CXX object Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/rdfiltercatalog.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfiltercatalog_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdfiltercatalog.dir/rdfiltercatalog.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Wrap/rdfiltercatalog.cpp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 64%] Built target fileParsersCatchTest
[ 64%] Building CXX object Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/FilterCatalog.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfiltercatalog_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdfiltercatalog.dir/FilterCatalog.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Wrap/FilterCatalog.cpp
[ 64%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/Property.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Descriptors.dir/Property.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Property.cpp
make -f Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/DependInfo.cmake --color=
Scanning dependencies of target testFragCatalog
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 64%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testFragCatalog.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/test1.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Property.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Property.cpp:32:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'std::vector<double> RDKit::Descriptors::Properties::computeProperties(const RDKit::ROMol&, bool) const':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 65%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/AUTOCORR2D.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Descriptors.dir/AUTOCORR2D.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/AUTOCORR2D.cpp
[ 65%] Linking CXX executable chemTransformsTestCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/cmake -E cmake_link_script CMakeFiles/chemTransformsTestCatch.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/chemTransformsTestCatch.dir/catch_tests.cpp.o  -o chemTransformsTestCatch  ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 65%] Built target chemTransformsTestCatch
[ 65%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/Data3Ddescriptors.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Descriptors.dir/Data3Ddescriptors.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Data3Ddescriptors.cpp
[ 65%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MolData3Ddescriptors.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Descriptors.dir/MolData3Ddescriptors.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/MolData3Ddescriptors.cpp
[ 65%] Linking CXX executable testFragCatalog
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFragCatalog.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testFragCatalog.dir/test1.cpp.o  -o testFragCatalog  ../../../lib/libRDKitFragCatalog.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 65%] Built target testFragCatalog
make -f Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build.make Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/DependInfo.cmake --color=
Scanning dependencies of target rdfragcatalog
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 65%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/rdfragcatalog.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfragcatalog_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdfragcatalog.dir/rdfragcatalog.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap/rdfragcatalog.cpp
make -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/DependInfo.cmake --color=
Scanning dependencies of target testFingerprintGenerators
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 65%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/testFingerprintGenerators.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testFingerprintGenerators.dir/testFingerprintGenerators.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp
[ 65%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/USRDescriptor.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/Descriptors.dir/USRDescriptor.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/USRDescriptor.cpp
[ 65%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragCatalog.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfragcatalog_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdfragcatalog.dir/FragCatalog.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap/FragCatalog.cpp
In file included from /usr/include/c++/9/algorithm:62,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/RDLog.h:17,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp:11:
/usr/include/c++/9/bits/stl_algo.h: In function '_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const unsigned int>]':
/usr/include/c++/9/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  112 |     __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last,
      |     ^~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Wrap/FilterCatalog.cpp:31:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h: In function 'void testAtomPairOutput()':
/usr/include/c++/9/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  161 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
  162 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  161 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
  162 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  161 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
  162 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  161 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
  162 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  161 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
  162 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  161 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
  162 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::FilterCatalogEntry::setProp(const string&, T) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 65%] Linking CXX shared library ../../../lib/libRDKitDescriptors.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/Descriptors.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitDescriptors.so.1 -o ../../../lib/libRDKitDescriptors.so.1.2019.09.1 CMakeFiles/Descriptors.dir/Crippen.cpp.o CMakeFiles/Descriptors.dir/MolDescriptors.cpp.o CMakeFiles/Descriptors.dir/MolSurf.cpp.o CMakeFiles/Descriptors.dir/Lipinski.cpp.o CMakeFiles/Descriptors.dir/ConnectivityDescriptors.cpp.o CMakeFiles/Descriptors.dir/MQN.cpp.o CMakeFiles/Descriptors.dir/Property.cpp.o CMakeFiles/Descriptors.dir/AUTOCORR2D.cpp.o CMakeFiles/Descriptors.dir/Data3Ddescriptors.cpp.o CMakeFiles/Descriptors.dir/MolData3Ddescriptors.cpp.o CMakeFiles/Descriptors.dir/USRDescriptor.cpp.o  ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap/FragCatalog.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1 ../../../lib/libRDKitDescriptors.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 65%] Built target Descriptors
make -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/DependInfo.cmake --color=
Scanning dependencies of target testFingerprints
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 65%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testFingerprints.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/test1.cpp
[ 65%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragCatParams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfragcatalog_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdfragcatalog.dir/FragCatParams.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap/FragCatParams.cpp
In file included from /usr/include/c++/9/set:60,
                 from /<<PKGBUILDDIR>>/Code/Query/SetQuery.h:13,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp:12:
/usr/include/c++/9/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, int>; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, int> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, int> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, int>, std::_Select1st<std::pair<const long long unsigned int, int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, int> >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:26,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp:12:
/usr/include/c++/9/bits/stl_map.h: In function 'void testRDKitFP()':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, int>, std::_Select1st<std::pair<const long long unsigned int, int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, int> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In function 'void testTopologicalTorsionFPOld()':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, int>, std::_Select1st<std::pair<const long long unsigned int, int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, int> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/test1.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
[ 65%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragCatGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfragcatalog_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdfragcatalog.dir/FragCatGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap/FragCatGenerator.cpp
[ 65%] Linking CXX executable testFingerprintGenerators
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFingerprintGenerators.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testFingerprintGenerators.dir/testFingerprintGenerators.cpp.o  -o testFingerprintGenerators  ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 65%] Built target testFingerprintGenerators
make -f Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/DependInfo.cmake --color=
Scanning dependencies of target fpTestCatch
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 65%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/fpTestCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp
[ 65%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragFPGenerator.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfragcatalog_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdfragcatalog.dir/FragFPGenerator.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap/FragFPGenerator.cpp
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::RDProps::clearProp(const string&) const':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/catch_tests.cpp:13:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 66%] Linking CXX shared module ../../../../rdkit/Chem/rdfragcatalog.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdfragcatalog.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdfragcatalog.so CMakeFiles/rdfragcatalog.dir/rdfragcatalog.cpp.o CMakeFiles/rdfragcatalog.dir/FragCatalog.cpp.o CMakeFiles/rdfragcatalog.dir/FragCatParams.cpp.o CMakeFiles/rdfragcatalog.dir/FragCatGenerator.cpp.o CMakeFiles/rdfragcatalog.dir/FragFPGenerator.cpp.o  ../../../../lib/libRDKitFragCatalog.so.1.2019.09.1 ../../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 66%] Built target rdfragcatalog
make -f Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/DependInfo.cmake --color=
Scanning dependencies of target testMolTransforms
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 66%] Building CXX object Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLTRANSFORMS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testMolTransforms.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/test1.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/test1.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/test1.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function 'void test1Canonicalization()':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 67%] Linking CXX executable testMolTransforms
[ 67%] Linking CXX executable testFingerprints
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolTransforms.dir/link.txt --verbose=1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFingerprints.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMolTransforms.dir/test1.cpp.o  -o testMolTransforms  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testFingerprints.dir/test1.cpp.o  -o testFingerprints  ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 67%] Built target testMolTransforms
make -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 67%] Built target testFingerprints
make -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/DependInfo.cmake --color=
Scanning dependencies of target testMMFFForceFieldHelpersMultiThread
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 67%] Building CXX object Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/testMultiThread.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/testMultiThread.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/testMultiThread.cpp
Scanning dependencies of target testMMFFForceFieldHelpers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/testMMFFHelpers.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testMMFFForceFieldHelpers.dir/testMMFFHelpers.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/testMMFFHelpers.cpp
[ 68%] Linking CXX executable fpTestCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_link_script CMakeFiles/fpTestCatch.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/fpTestCatch.dir/catch_tests.cpp.o  -o fpTestCatch  ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Built target fpTestCatch
make -f Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/DependInfo.cmake --color=
Scanning dependencies of target testUFFForceFieldHelpers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/testUFFHelpers.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testUFFForceFieldHelpers.dir/testUFFHelpers.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/testUFFHelpers.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/testMMFFHelpers.cpp:15:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/testMMFFHelpers.cpp:15:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 68%] Linking CXX executable testMMFFForceFieldHelpersMultiThread
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/testMultiThread.cpp.o  -o testMMFFForceFieldHelpersMultiThread  ../../../../lib/libRDKitDistGeomHelpers.so.1.2019.09.1 ../../../../lib/libRDKitDistGeometry.so.1.2019.09.1 ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Built target testMMFFForceFieldHelpersMultiThread
make -f Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build.make Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/DependInfo.cmake --color=
Scanning dependencies of target testCrystalForceField
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build.make Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/testCrystalFF.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testCrystalForceField.dir/testCrystalFF.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF/testCrystalFF.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/testUFFHelpers.cpp:15:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/testUFFHelpers.cpp:15:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 69%] Linking CXX executable testCrystalForceField
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testCrystalForceField.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testCrystalForceField.dir/testCrystalFF.cpp.o  -o testCrystalForceField  ../../../../lib/libRDKitDistGeomHelpers.so.1.2019.09.1 ../../../../lib/libRDKitDistGeometry.so.1.2019.09.1 ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 69%] Built target testCrystalForceField
make -f Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/DependInfo.cmake --color=
Scanning dependencies of target testDistGeomHelpers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 69%] Building CXX object Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/testDgeomHelpers.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/c++  -DRDKIT_DISTGEOMHELPERS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testDistGeomHelpers.dir/testDgeomHelpers.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp
[ 69%] Linking CXX executable testMMFFForceFieldHelpers
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMMFFForceFieldHelpers.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMMFFForceFieldHelpers.dir/testMMFFHelpers.cpp.o  -o testMMFFForceFieldHelpers  ../../../../lib/libRDKitDistGeomHelpers.so.1.2019.09.1 ../../../../lib/libRDKitDistGeometry.so.1.2019.09.1 ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 69%] Built target testMMFFForceFieldHelpers
make -f Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build.make Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/DependInfo.cmake --color=
Scanning dependencies of target rdDistGeom
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build.make Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 69%] Building CXX object Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/rdDistGeom.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap && /usr/bin/c++  -DBOOST_PYTHON_MAX_ARITY=32 -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdDistGeom_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdDistGeom.dir/rdDistGeom.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp
[ 69%] Linking CXX executable testUFFForceFieldHelpers
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testUFFForceFieldHelpers.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testUFFForceFieldHelpers.dir/testUFFHelpers.cpp.o  -o testUFFForceFieldHelpers  ../../../../lib/libRDKitDistGeomHelpers.so.1.2019.09.1 ../../../../lib/libRDKitDistGeometry.so.1.2019.09.1 ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 69%] Built target testUFFForceFieldHelpers
make -f Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/DependInfo.cmake --color=
Scanning dependencies of target testMolAlign
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 69%] Building CXX object Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/testMolAlign.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLALIGN_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testMolAlign.dir/testMolAlign.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/testMolAlign.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:60,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp:10:
/usr/include/c++/9/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDGeom::Point3D>; _KeyOfValue = std::_Select1st<std::pair<const int, RDGeom::Point3D> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp:17:
/<<PKGBUILDDIR>>/Code/Geometry/point.h: In function 'RDKit::INT_VECT RDKit::EmbedMultipleConfs(RDKit::ROMol&, unsigned int, unsigned int, int, bool, bool, double, bool, unsigned int, double, boost::python::dict&, double, bool, bool, int, bool, bool, bool)':
/<<PKGBUILDDIR>>/Code/Geometry/point.h:85:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
   85 |     x = other.x;
      |         ~~~~~~^
In file included from /usr/include/c++/9/map:61,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp:10:
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp:17:
/<<PKGBUILDDIR>>/Code/Geometry/point.h: In function 'int RDKit::EmbedMolecule(RDKit::ROMol&, unsigned int, int, bool, bool, double, bool, unsigned int, boost::python::dict&, double, bool, bool, bool, bool, bool)':
/<<PKGBUILDDIR>>/Code/Geometry/point.h:85:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
   85 |     x = other.x;
      |         ~~~~~~^
In file included from /usr/include/c++/9/map:61,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp:10:
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Vector.h:15,
                 from /<<PKGBUILDDIR>>/Code/Numerics/Matrix.h:15,
                 from /<<PKGBUILDDIR>>/Code/Numerics/SquareMatrix.h:14,
                 from /<<PKGBUILDDIR>>/Code/Geometry/Transform3D.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/AlignMolecules.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/testMolAlign.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<double, double>}; _Tp = std::pair<double, double>; _Alloc = std::allocator<std::pair<double, double> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::pair<double, double> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<double, double>*, std::vector<std::pair<double, double> > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair<double, double>}; _Tp = std::pair<double, double>; _Alloc = std::allocator<std::pair<double, double> >]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, double>*, std::vector<std::pair<double, double> > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 69%] Linking CXX shared module ../../../../rdkit/Chem/rdDistGeom.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdDistGeom.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdDistGeom.so CMakeFiles/rdDistGeom.dir/rdDistGeom.cpp.o  ../../../../lib/libRDKitDistGeomHelpers.so.1.2019.09.1 ../../../../lib/libRDKitDistGeometry.so.1.2019.09.1 ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
In file included from /usr/include/c++/9/set:60,
                 from /<<PKGBUILDDIR>>/Code/Query/SetQuery.h:13,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:13:
/usr/include/c++/9/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDGeom::Point3D>; _KeyOfValue = std::_Select1st<std::pair<const int, RDGeom::Point3D> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:26,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:13:
/usr/include/c++/9/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](std::map<_Key, _Tp, _Compare, _Alloc>::key_type&&) [with _Key = int; _Tp = RDGeom::Point3D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 69%] Built target rdDistGeom
make -f Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build.make Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/DependInfo.cmake --color=
/usr/include/c++/9/bits/stl_map.h: In function 'void testGithub2246()':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
Scanning dependencies of target rdMolAlign
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build.make Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 69%] Building CXX object Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/rdMolAlign.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolAlign_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMolAlign.dir/rdMolAlign.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp
/usr/include/c++/9/bits/stl_map.h: In function 'void testConstrainedEmbedding()':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In function 'void testGithub55()':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In function 'void testGithub568()':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 70%] Linking CXX executable testMolAlign
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolAlign.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMolAlign.dir/testMolAlign.cpp.o  -o testMolAlign  ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDistGeomHelpers.so.1.2019.09.1 ../../../lib/libRDKitDistGeometry.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 70%] Built target testMolAlign
make -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/DependInfo.cmake --color=
Scanning dependencies of target testFeatures
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make -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 70%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/testFeatures.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLCHEMICALFEATURES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testFeatures.dir/testFeatures.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/testFeatures.cpp
[ 71%] Linking CXX shared module ../../../../rdkit/Chem/rdfiltercatalog.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdfiltercatalog.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdfiltercatalog.so CMakeFiles/rdfiltercatalog.dir/rdfiltercatalog.cpp.o CMakeFiles/rdfiltercatalog.dir/FilterCatalog.cpp.o  ../../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 71%] Built target rdfiltercatalog
make -f Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/DependInfo.cmake --color=
Scanning dependencies of target testShapeHelpers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 71%] Building CXX object Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/testShapeHelpers.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SHAPEHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testShapeHelpers.dir/testShapeHelpers.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/testShapeHelpers.cpp
/<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp: In function 'RDKit::MolAlign::PyO3A* RDKit::MolAlign::getCrippenO3A(RDKit::ROMol&, RDKit::ROMol&, boost::python::list, boost::python::list, int, int, bool, unsigned int, unsigned int, boost::python::list, boost::python::list)':
/<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp:451:40: warning: comparison of integer expressions of different signedness: 'boost::python::ssize_t' {aka 'int'} and 'unsigned int' [-Wsign-compare]
  451 |       (python::len(prbCrippenContribs) == prbNAtoms)) {
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp:466:40: warning: comparison of integer expressions of different signedness: 'boost::python::ssize_t' {aka 'int'} and 'unsigned int' [-Wsign-compare]
  466 |       (python::len(refCrippenContribs) == refNAtoms)) {
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp: In function 'boost::python::tuple RDKit::MolAlign::getCrippenO3AForConfs(RDKit::ROMol&, RDKit::ROMol&, int, boost::python::list, boost::python::list, int, bool, unsigned int, unsigned int, boost::python::list, boost::python::list)':
/<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp:532:40: warning: comparison of integer expressions of different signedness: 'boost::python::ssize_t' {aka 'int'} and 'unsigned int' [-Wsign-compare]
  532 |       (python::len(prbCrippenContribs) == prbNAtoms)) {
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp:547:40: warning: comparison of integer expressions of different signedness: 'boost::python::ssize_t' {aka 'int'} and 'unsigned int' [-Wsign-compare]
  547 |       (python::len(refCrippenContribs) == refNAtoms)) {
      |        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 71%] Linking CXX executable testDistGeomHelpers
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDistGeomHelpers.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testDistGeomHelpers.dir/testDgeomHelpers.cpp.o  -o testDistGeomHelpers  ../../../lib/libRDKitDistGeomHelpers.so.1.2019.09.1 ../../../lib/libRDKitDistGeometry.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 71%] Built target testDistGeomHelpers
make -f Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/DependInfo.cmake --color=
Scanning dependencies of target testMolCatalog
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 71%] Building CXX object Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testMolCatalog.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/test1.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/testFeatures.cpp:16:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/testFeatures.cpp:16:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 71%] Linking CXX executable testShapeHelpers
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testShapeHelpers.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testShapeHelpers.dir/testShapeHelpers.cpp.o  -o testShapeHelpers  ../../../lib/libRDKitShapeHelpers.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 71%] Built target testShapeHelpers
make -f Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build.make Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMolCatalog
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build.make Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 71%] Building CXX object Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/rdMolCatalog.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolCatalog_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMolCatalog.dir/rdMolCatalog.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/Wrap/rdMolCatalog.cpp
/usr/include/c++/9/bits/stl_vector.h: In function 'void test6()':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In function 'void testGithub2077()':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp:24:
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h: In function 'RDNumeric::DoubleVector* RDKit::_translateWeights(boost::python::api::object)':
/<<PKGBUILDDIR>>/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
   68 |       T res = python::extract<T>(d_seq[which]);
      |         ^~~
[ 71%] Linking CXX executable testFeatures
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFeatures.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testFeatures.dir/testFeatures.cpp.o  -o testFeatures  ../../../lib/libRDKitMolChemicalFeatures.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FMCS /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/DependInfo.cmake --color=
Scanning dependencies of target FMCS
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[ 71%] Building CXX object Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/FMCS.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/c++  -DFMCS_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FMCS.dir/FMCS.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/FMCS.cpp
[ 71%] Linking CXX executable testMolCatalog
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolCatalog.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMolCatalog.dir/test1.cpp.o  -o testMolCatalog  ../../../lib/libRDKitMolCatalog.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
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[ 71%] Built target testMolCatalog
[ 71%] Building CXX object Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/Seed.cpp.o
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[ 71%] Linking CXX shared module ../../../../rdkit/Chem/rdMolAlign.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolAlign.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdMolAlign.so CMakeFiles/rdMolAlign.dir/rdMolAlign.cpp.o  ../../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/c++  -DMolHash_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLHASH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolHash.dir/MolHash.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/MolHash.cpp
[ 72%] Linking CXX shared module ../../../../rdkit/Chem/rdMolCatalog.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolCatalog.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdMolCatalog.so CMakeFiles/rdMolCatalog.dir/rdMolCatalog.cpp.o  ../../../../lib/libRDKitMolCatalog.so.1.2019.09.1 ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MMPA /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/DependInfo.cmake --color=
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA && /usr/bin/c++  -DMMPA_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MMPA_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MMPA.dir/MMPA.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MMPA/MMPA.cpp
[ 73%] Building CXX object Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/MaximumCommonSubgraph.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/c++  -DFMCS_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FMCS.dir/MaximumCommonSubgraph.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/MaximumCommonSubgraph.cpp
[ 74%] Building CXX object Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/SubstructMatchCustom.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/c++  -DFMCS_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/FMCS.dir/SubstructMatchCustom.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/SubstructMatchCustom.cpp
[ 75%] Building CXX object Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/HashToString.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/c++  -DMolHash_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLHASH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolHash.dir/HashToString.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/HashToString.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MMPA/MMPA.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
make -f Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/build.make Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/depend
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/DependInfo.cmake --color=
Scanning dependencies of target StructChecker
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 75%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/StructChecker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/StructChecker.dir/StructChecker.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/StructChecker.cpp
[ 75%] Linking CXX shared library ../../../lib/libRDKitMMPA.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMPA.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitMMPA.so.1 -o ../../../lib/libRDKitMMPA.so.1.2019.09.1 CMakeFiles/MMPA.dir/MMPA.cpp.o  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
[ 75%] Building CXX object Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/hashfunctions.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/c++  -DMolHash_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLHASH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolHash.dir/hashfunctions.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/hashfunctions.cpp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMMPA.so.1.2019.09.1 ../../../lib/libRDKitMMPA.so.1 ../../../lib/libRDKitMMPA.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 75%] Built target MMPA
make -f Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/DependInfo.cmake --color=
Scanning dependencies of target trajectoryTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 75%] Building CXX object Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/trajectoryTest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_TRAJECTORY_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/trajectoryTest.dir/trajectoryTest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/trajectoryTest.cpp
[ 75%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/StructCheckerOptions.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/StructChecker.dir/StructCheckerOptions.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/StructCheckerOptions.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/Trajectory.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory/trajectoryTest.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
[ 75%] Building CXX object Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/normalize.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/c++  -DMolHash_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLHASH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolHash.dir/normalize.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/normalize.cpp
/usr/include/c++/9/bits/vector.tcc: In function 'void testAddConformersFromTrajectory()':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 75%] Linking CXX shared library ../../../lib/libRDKitFMCS.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/cmake -E cmake_link_script CMakeFiles/FMCS.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitFMCS.so.1 -o ../../../lib/libRDKitFMCS.so.1.2019.09.1 CMakeFiles/FMCS.dir/FMCS.cpp.o CMakeFiles/FMCS.dir/Seed.cpp.o CMakeFiles/FMCS.dir/MaximumCommonSubgraph.cpp.o CMakeFiles/FMCS.dir/SubstructMatchCustom.cpp.o  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitFMCS.so.1.2019.09.1 ../../../lib/libRDKitFMCS.so.1 ../../../lib/libRDKitFMCS.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 75%] Built target FMCS
make -f Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/DependInfo.cmake --color=
Scanning dependencies of target substructLibraryTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 76%] Building CXX object Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/substructLibraryTest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBSTRUCTLIBRARY_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/substructLibraryTest.dir/substructLibraryTest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/substructLibraryTest.cpp
[ 77%] Linking CXX executable trajectoryTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory && /usr/bin/cmake -E cmake_link_script CMakeFiles/trajectoryTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/trajectoryTest.dir/trajectoryTest.cpp.o  -o trajectoryTest  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 77%] Built target trajectoryTest
make -f Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/DependInfo.cmake --color=
Scanning dependencies of target rdSubstructLibrary
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 77%] Building CXX object Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/rdSubstructLibrary.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSubstructLibrary_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdSubstructLibrary.dir/rdSubstructLibrary.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/Wrap/rdSubstructLibrary.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/normalize.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
[ 77%] Building CXX object Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/SubstructLibraryWrap.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSubstructLibrary_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdSubstructLibrary.dir/SubstructLibraryWrap.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/Wrap/SubstructLibraryWrap.cpp
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::RDProps::clearProp(const string&) const':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 77%] Linking CXX shared library ../../../lib/libRDKitMolHash.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolHash.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitMolHash.so.1 -o ../../../lib/libRDKitMolHash.so.1.2019.09.1 CMakeFiles/MolHash.dir/MolHash.cpp.o CMakeFiles/MolHash.dir/HashToString.cpp.o CMakeFiles/MolHash.dir/hashfunctions.cpp.o CMakeFiles/MolHash.dir/normalize.cpp.o  ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolHash.so.1.2019.09.1 ../../../lib/libRDKitMolHash.so.1 ../../../lib/libRDKitMolHash.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 77%] Built target MolHash
make -f Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/DependInfo.cmake --color=
Scanning dependencies of target RGroupDecomposition
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 77%] Building CXX object Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupDecomp.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_RGROUPDECOMPOSITION_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DRGroupDecomposition_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/RGroupDecomposition.dir/RGroupDecomp.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupDecomp.cpp
[ 77%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/StructureFlags.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/StructChecker.dir/StructureFlags.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/StructureFlags.cpp
[ 77%] Linking CXX executable substructLibraryTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary && /usr/bin/cmake -E cmake_link_script CMakeFiles/substructLibraryTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/substructLibraryTest.dir/substructLibraryTest.cpp.o  -o substructLibraryTest  ../../../lib/libRDKitSubstructLibrary.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 -lboost_serialization ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 77%] Built target substructLibraryTest
make -f Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/DependInfo.cmake --color=
Scanning dependencies of target molInterchangeTest1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 77%] Building CXX object Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLINTERCHANGE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/rapidjson -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/molInterchangeTest1.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/test1.cpp
[ 77%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/Utilites.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/StructChecker.dir/Utilites.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/Utilites.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/../RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupDecomp.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupDecomp.cpp:31:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 77%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/Pattern.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/StructChecker.dir/Pattern.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/Pattern.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/test1.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 77%] Linking CXX executable molInterchangeTest1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange && /usr/bin/cmake -E cmake_link_script CMakeFiles/molInterchangeTest1.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/molInterchangeTest1.dir/test1.cpp.o  -o molInterchangeTest1  ../../../lib/libRDKitMolInterchange.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 77%] Built target molInterchangeTest1
make -f Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/DependInfo.cmake --color=
Scanning dependencies of target rdmolfiles
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 77%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/rdmolfiles.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdmolfiles.dir/rdmolfiles.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/rdmolfiles.cpp
[ 77%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/Stereo.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/StructChecker.dir/Stereo.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/Stereo.cpp
[ 77%] Linking CXX shared module ../../../../rdkit/Chem/rdSubstructLibrary.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdSubstructLibrary.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdSubstructLibrary.so CMakeFiles/rdSubstructLibrary.dir/rdSubstructLibrary.cpp.o CMakeFiles/rdSubstructLibrary.dir/SubstructLibraryWrap.cpp.o  ../../../../lib/libRDKitSubstructLibrary.so.1.2019.09.1 ../../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 77%] Built target rdSubstructLibrary
[ 77%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/ForwardSDMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdmolfiles.dir/ForwardSDMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/ForwardSDMolSupplier.cpp
[ 77%] Linking CXX shared library ../../../lib/libRDKitRGroupDecomposition.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/cmake -E cmake_link_script CMakeFiles/RGroupDecomposition.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitRGroupDecomposition.so.1 -o ../../../lib/libRDKitRGroupDecomposition.so.1.2019.09.1 CMakeFiles/RGroupDecomposition.dir/RGroupDecomp.cpp.o  ../../../lib/libRDKitFMCS.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitRGroupDecomposition.so.1.2019.09.1 ../../../lib/libRDKitRGroupDecomposition.so.1 ../../../lib/libRDKitRGroupDecomposition.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 77%] Built target RGroupDecomposition
make -f Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/DependInfo.cmake --color=
Scanning dependencies of target ChemReactions
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 78%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/Reaction.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ChemReactions.dir/Reaction.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h:37,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.cpp:33:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 79%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/AtomSymbolMatch.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/StructChecker.dir/AtomSymbolMatch.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/AtomSymbolMatch.cpp
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/ForwardSDMolSupplier.cpp:22:
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:186:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |       off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                        ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:156:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |         off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                          ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:379:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  379 |       result = off_type(bp::extract<off_type>(py_tell()));
      |                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 79%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/MDLParser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ChemReactions.dir/MDLParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/MDLParser.cpp
[ 79%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/DaylightParser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ChemReactions.dir/DaylightParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/DaylightParser.cpp
[ 79%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/StripSmallFragments.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/StructChecker.dir/StripSmallFragments.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/StripSmallFragments.cpp
[ 79%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionPickler.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ChemReactions.dir/ReactionPickler.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionPickler.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/../MolOps.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/StripSmallFragments.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
make -f Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/DependInfo.cmake --color=
Scanning dependencies of target testAUTOCORR2D
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 80%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/testAUTOCORR2D.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testAUTOCORR2D.dir/testAUTOCORR2D.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/testAUTOCORR2D.cpp
[ 80%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/ReCharge.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/StructChecker.dir/ReCharge.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/ReCharge.cpp
[ 80%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ChemReactions.dir/ReactionWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionWriter.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/rdmolfiles.cpp:13:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 80%] Linking CXX executable testAUTOCORR2D
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/testAUTOCORR2D.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testAUTOCORR2D.dir/testAUTOCORR2D.cpp.o  -o testAUTOCORR2D  ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 80%] Built target testAUTOCORR2D
[ 80%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionDepict.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ChemReactions.dir/ReactionDepict.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionDepict.cpp
[ 80%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/Tautomer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/StructChecker.dir/Tautomer.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/Tautomer.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h:37,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionWriter.cpp:33:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In function 'void {anonymous}::setRXNRoleOfAllMoleculeAtoms(RDKit::ROMol&, int)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 81%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionFingerprints.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ChemReactions.dir/ReactionFingerprints.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionFingerprints.cpp
make -f Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/DependInfo.cmake --color=
Scanning dependencies of target testDescriptors
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 81%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/test.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testDescriptors.dir/test.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/test.cpp
[ 81%] Linking CXX shared library ../../../lib/libRDKitStructChecker.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/cmake -E cmake_link_script CMakeFiles/StructChecker.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitStructChecker.so.1 -o ../../../lib/libRDKitStructChecker.so.1.2019.09.1 CMakeFiles/StructChecker.dir/StructChecker.cpp.o CMakeFiles/StructChecker.dir/StructCheckerOptions.cpp.o CMakeFiles/StructChecker.dir/StructureFlags.cpp.o CMakeFiles/StructChecker.dir/Utilites.cpp.o CMakeFiles/StructChecker.dir/Pattern.cpp.o CMakeFiles/StructChecker.dir/Stereo.cpp.o CMakeFiles/StructChecker.dir/AtomSymbolMatch.cpp.o CMakeFiles/StructChecker.dir/StripSmallFragments.cpp.o CMakeFiles/StructChecker.dir/ReCharge.cpp.o CMakeFiles/StructChecker.dir/Tautomer.cpp.o  ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitStructChecker.so.1.2019.09.1 ../../../lib/libRDKitStructChecker.so.1 ../../../lib/libRDKitStructChecker.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 81%] Built target StructChecker
[ 81%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ChemReactions.dir/ReactionUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionUtils.cpp
[ 81%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/MaeMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdmolfiles.dir/MaeMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MaeMolSupplier.cpp
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionFingerprints.cpp: In function 'RDKit::SparseIntVect<unsigned int>* RDKit::DifferenceFingerprintChemReaction(const RDKit::ChemicalReaction&, const RDKit::ReactionFingerprintParams&)':
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionFingerprints.cpp:221:42: warning: implicitly-declared 'RDKit::SparseIntVect<unsigned int>& RDKit::SparseIntVect<unsigned int>::operator=(const RDKit::SparseIntVect<unsigned int>&)' is deprecated [-Wdeprecated-copy]
  221 |     (*res) = *productFP - *reactantFP + *agentFP;
      |                                          ^~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionFingerprints.cpp:37:
/<<PKGBUILDDIR>>/Code/DataStructs/SparseIntVect.h:38:3: note: because 'RDKit::SparseIntVect<unsigned int>' has user-provided 'RDKit::SparseIntVect<IndexType>::SparseIntVect(const RDKit::SparseIntVect<IndexType>&) [with IndexType = unsigned int]'
   38 |   SparseIntVect(const SparseIntVect<IndexType> &other) {
      |   ^~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionFingerprints.cpp:226:28: warning: implicitly-declared 'RDKit::SparseIntVect<unsigned int>& RDKit::SparseIntVect<unsigned int>::operator=(const RDKit::SparseIntVect<unsigned int>&)' is deprecated [-Wdeprecated-copy]
  226 |     (*res) = *productFP - *reactantFP;
      |                            ^~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionFingerprints.cpp:37:
/<<PKGBUILDDIR>>/Code/DataStructs/SparseIntVect.h:38:3: note: because 'RDKit::SparseIntVect<unsigned int>' has user-provided 'RDKit::SparseIntVect<IndexType>::SparseIntVect(const RDKit::SparseIntVect<IndexType>&) [with IndexType = unsigned int]'
   38 |   SparseIntVect(const SparseIntVect<IndexType> &other) {
      |   ^~~~~~~~~~~~~
make -f Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build.make Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMolDescriptors
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build.make Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 81%] Building CXX object Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/rdMolDescriptors.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolDescriptors_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMolDescriptors.dir/rdMolDescriptors.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Wrap/rdMolDescriptors.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h:37,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionUtils.cpp:34:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 81%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/MoleculeParser.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ChemReactions.dir/MoleculeParser.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/MoleculeParser.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function.hpp:30,
                 from /usr/include/boost/algorithm/string/detail/find_iterator.hpp:18,
                 from /usr/include/boost/algorithm/string/find_iterator.hpp:24,
                 from /usr/include/boost/algorithm/string/iter_find.hpp:27,
                 from /usr/include/boost/algorithm/string/split.hpp:16,
                 from /usr/include/boost/algorithm/string.hpp:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/test.cpp:16:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MaeMolSupplier.cpp:21:
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:186:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |       off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                        ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:156:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |         off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                          ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:379:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  379 |       result = off_type(bp::extract<off_type>(py_tell()));
      |                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 81%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionRunner.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ChemReactions.dir/ReactionRunner.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionRunner.cpp
[ 81%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SDMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdmolfiles.dir/SDMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SDMolSupplier.cpp
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function.hpp:30,
                 from /usr/include/boost/algorithm/string/detail/find_iterator.hpp:18,
                 from /usr/include/boost/algorithm/string/find_iterator.hpp:24,
                 from /usr/include/boost/algorithm/string/iter_find.hpp:27,
                 from /usr/include/boost/algorithm/string/split.hpp:16,
                 from /usr/include/boost/algorithm/string.hpp:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/test.cpp:16:
/usr/include/c++/9/bits/stl_vector.h: In function 'void testProperties()':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h:37,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionRunner.cpp:33:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h:37,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionRunner.cpp:33:
/usr/include/c++/9/bits/stl_vector.h: In function 'void RDKit::ReactionRunnerUtils::generateProductConformers(RDKit::Conformer*, const RDKit::ROMol&, RDKit::ReactionRunnerUtils::ReactantProductAtomMapping*)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h:37,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionRunner.cpp:33:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Wrap/rdMolDescriptors.cpp:12:
/<<PKGBUILDDIR>>/Code/Geometry/point.h: In function 'boost::python::list {anonymous}::GetUSRDistributionsFromPoints(boost::python::api::object, boost::python::api::object)':
/<<PKGBUILDDIR>>/Code/Geometry/point.h:85:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
   85 |     x = other.x;
      |         ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:86:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::y' may be used uninitialized in this function [-Wmaybe-uninitialized]
   86 |     y = other.y;
      |         ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:87:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::z' may be used uninitialized in this function [-Wmaybe-uninitialized]
   87 |     z = other.z;
      |         ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h: In function 'boost::python::list {anonymous}::GetUSRDistributions(boost::python::api::object, boost::python::api::object)':
/<<PKGBUILDDIR>>/Code/Geometry/point.h:85:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
   85 |     x = other.x;
      |         ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:86:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::y' may be used uninitialized in this function [-Wmaybe-uninitialized]
   86 |     y = other.y;
      |         ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:87:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::z' may be used uninitialized in this function [-Wmaybe-uninitialized]
   87 |     z = other.z;
      |         ~~~~~~^
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SDMolSupplier.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In function 'void RDKit::setStreamIndices(RDKit::SDMolSupplier&, boost::python::api::object)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 81%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/TDTMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdmolfiles.dir/TDTMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/TDTMolSupplier.cpp
[ 81%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/PreprocessRxn.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ChemReactions.dir/PreprocessRxn.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/PreprocessRxn.cpp
[ 81%] Linking CXX executable testDescriptors
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDescriptors.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testDescriptors.dir/test.cpp.o  -o testDescriptors  ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 81%] Built target testDescriptors
make -f Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FMCS /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/DependInfo.cmake --color=
Scanning dependencies of target testFMCS
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 81%] Building CXX object Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/testFMCS_Unit.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testFMCS.dir/testFMCS_Unit.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/testFMCS_Unit.cpp
[ 81%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/SanitizeRxn.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ChemReactions.dir/SanitizeRxn.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/SanitizeRxn.cpp
[ 81%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SmilesMolSupplier.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdmolfiles.dir/SmilesMolSupplier.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SmilesMolSupplier.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h:37,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/SanitizeRxn.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/SanitizeRxn.cpp:32:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/testFMCS_Unit.cpp:48:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 81%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/Enumerate/Enumerate.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ChemReactions.dir/Enumerate/Enumerate.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/Enumerate.cpp
[ 81%] Linking CXX executable testFMCS
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFMCS.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testFMCS.dir/testFMCS_Unit.cpp.o  -o testFMCS  ../../../lib/libRDKitFMCS.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 81%] Built target testFMCS
make -f Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build.make Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/DependInfo.cmake --color=
Scanning dependencies of target rdFMCS
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build.make Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 81%] Building CXX object Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/rdFMCS.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdFMCS_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdFMCS.dir/rdFMCS.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Wrap/rdFMCS.cpp
[ 82%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SmilesWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdmolfiles.dir/SmilesWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SmilesWriter.cpp
[ 83%] Linking CXX shared module ../../../../rdkit/Chem/rdMolDescriptors.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolDescriptors.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdMolDescriptors.so CMakeFiles/rdMolDescriptors.dir/rdMolDescriptors.cpp.o  ../../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 83%] Built target rdMolDescriptors
[ 83%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SDWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdmolfiles.dir/SDWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SDWriter.cpp
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SmilesWriter.cpp:20:
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:186:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |       off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                        ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:156:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |         off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                          ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:379:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  379 |       result = off_type(bp::extract<off_type>(py_tell()));
      |                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 84%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/Enumerate/EnumerationPickler.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ChemReactions.dir/Enumerate/EnumerationPickler.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/EnumerationPickler.cpp
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/SDWriter.cpp:21:
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:186:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |       off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                        ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:156:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |         off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                          ^
[ 84%] Linking CXX shared module ../../../../rdkit/Chem/rdFMCS.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdFMCS.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdFMCS.so CMakeFiles/rdFMCS.dir/rdFMCS.cpp.o  ../../../../lib/libRDKitFMCS.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:379:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  379 |       result = off_type(bp::extract<off_type>(py_tell()));
      |                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 84%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/Enumerate/EvenSamplePairs.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/ChemReactions.dir/Enumerate/EvenSamplePairs.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/EvenSamplePairs.cpp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 84%] Built target rdFMCS
[ 84%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/TDTWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdmolfiles.dir/TDTWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/TDTWriter.cpp
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/DependInfo.cmake --color=
Scanning dependencies of target FMCStest
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[ 84%] Building CXX object Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/testFMCS.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/FMCStest.dir/testFMCS.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp
[ 84%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/PDBWriter.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdmolfiles.dir/PDBWriter.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/PDBWriter.cpp
/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp: In function 'std::string testChEMBL_Txt(const char*, double, const char*)':
/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp:501:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type' {aka 'unsigned int'} [-Wformat=]
  501 |   fprintf(fres, "%s;%lu;%.1f;%.4f;%u;%u;%s;", test, mols.size(), th, sec,
      |                     ~~^                             ~~~~~~~~~~~
      |                       |                                      |
      |                       long unsigned int                      std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type {aka unsigned int}
      |                     %u
/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp: In function 'void testFileSDF_RandomSet_SMI(const char*, const char*)':
/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp:1173:27: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type' {aka 'unsigned int'} [-Wformat=]
 1173 |       fprintf(fcsv, "%u;%lu;%s;%.3f;%u;%u;%s;", n, mols.size(),
      |                         ~~^                        ~~~~~~~~~~~
      |                           |                                 |
      |                           long unsigned int                 std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type {aka unsigned int}
      |                         %u
/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp:1185:27: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type' {aka 'unsigned int'} [-Wformat=]
 1185 |       fprintf(fcsv, "%u;%lu;%s;%.3f;%u;%u;%s\n", n, mols.size(),
      |                         ~~^                         ~~~~~~~~~~~
      |                           |                                  |
      |                           long unsigned int                  std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type {aka unsigned int}
      |                         %u
/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp: In function 'void testFileSDF_RandomSet(const char*, const char*)':
/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp:1287:29: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type' {aka 'unsigned int'} [-Wformat=]
 1287 |         fprintf(fcsv, "%u;%lu;%s;%.5f;%u;%u;%s;", n, mols.size(),
      |                           ~~^                        ~~~~~~~~~~~
      |                             |                                 |
      |                             long unsigned int                 std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type {aka unsigned int}
      |                           %u
/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp:1336:27: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type' {aka 'unsigned int'} [-Wformat=]
 1336 |       fprintf(fcsv, "%u;%lu;%s;%.5f;%u;%u;%s;", n, mols.size(),
      |                         ~~^                        ~~~~~~~~~~~
      |                           |                                 |
      |                           long unsigned int                 std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type {aka unsigned int}
      |                         %u
/<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp:1416:29: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type' {aka 'unsigned int'} [-Wformat=]
 1416 |         fprintf(fcsv, "%u;%lu;%s;%.5f;%u;%u;%s;", n, mols.size(),
      |                           ~~^                        ~~~~~~~~~~~
      |                             |                                 |
      |                             long unsigned int                 std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type {aka unsigned int}
      |                           %u
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/../../RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test/testFMCS.cpp:48:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/TDTWriter.cpp:21:
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:186:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |       off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                        ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:156:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |         off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                          ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:379:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  379 |       result = off_type(bp::extract<off_type>(py_tell()));
      |                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 84%] Linking CXX shared library ../../../lib/libRDKitChemReactions.so
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/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitChemReactions.so.1 -o ../../../lib/libRDKitChemReactions.so.1.2019.09.1 CMakeFiles/ChemReactions.dir/Reaction.cpp.o CMakeFiles/ChemReactions.dir/MDLParser.cpp.o CMakeFiles/ChemReactions.dir/DaylightParser.cpp.o CMakeFiles/ChemReactions.dir/ReactionPickler.cpp.o CMakeFiles/ChemReactions.dir/ReactionWriter.cpp.o CMakeFiles/ChemReactions.dir/ReactionDepict.cpp.o CMakeFiles/ChemReactions.dir/ReactionFingerprints.cpp.o CMakeFiles/ChemReactions.dir/ReactionUtils.cpp.o CMakeFiles/ChemReactions.dir/MoleculeParser.cpp.o CMakeFiles/ChemReactions.dir/ReactionRunner.cpp.o CMakeFiles/ChemReactions.dir/PreprocessRxn.cpp.o CMakeFiles/ChemReactions.dir/SanitizeRxn.cpp.o CMakeFiles/ChemReactions.dir/Enumerate/Enumerate.cpp.o CMakeFiles/ChemReactions.dir/Enumerate/EnumerationPickler.cpp.o CMakeFiles/ChemReactions.dir/Enumerate/EvenSamplePairs.cpp.o  ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 -lboost_serialization ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../lib/libRDKitChemReactions.so.1 ../../../lib/libRDKitChemReactions.so
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[ 84%] Built target ChemReactions
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolHash /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/DependInfo.cmake --color=
Scanning dependencies of target molHashCatchTest
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[ 84%] Building CXX object Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLHASH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/molHashCatchTest.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/catch_tests.cpp
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Scanning dependencies of target testMolHash
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
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[ 84%] Building CXX object Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/testMolHash.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLHASH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testMolHash.dir/testMolHash.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/testMolHash.cpp
/usr/include/c++/9/bits/vector.tcc: In function 'void test504()':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/PDBWriter.cpp:20:
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:186:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |       off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                        ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:156:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |         off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                          ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:379:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  379 |       result = off_type(bp::extract<off_type>(py_tell()));
      |                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 84%] Linking CXX executable FMCStest
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/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/FMCStest.dir/testFMCS.cpp.o  -o FMCStest  ../../../../lib/libRDKitFMCS.so.1.2019.09.1 ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
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[ 84%] Linking CXX shared module ../../../rdkit/Chem/rdmolfiles.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdmolfiles.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/Chem/rdmolfiles.so CMakeFiles/rdmolfiles.dir/rdmolfiles.cpp.o CMakeFiles/rdmolfiles.dir/ForwardSDMolSupplier.cpp.o CMakeFiles/rdmolfiles.dir/MaeMolSupplier.cpp.o CMakeFiles/rdmolfiles.dir/SDMolSupplier.cpp.o CMakeFiles/rdmolfiles.dir/TDTMolSupplier.cpp.o CMakeFiles/rdmolfiles.dir/SmilesMolSupplier.cpp.o CMakeFiles/rdmolfiles.dir/SmilesWriter.cpp.o CMakeFiles/rdmolfiles.dir/SDWriter.cpp.o CMakeFiles/rdmolfiles.dir/TDTWriter.cpp.o CMakeFiles/rdmolfiles.dir/PDBWriter.cpp.o  ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 84%] Built target rdmolfiles
make -f Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MMPA /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/DependInfo.cmake --color=
Scanning dependencies of target testMMPA
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 84%] Building CXX object Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/MMPA_UnitTest.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MMPA_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testMMPA.dir/MMPA_UnitTest.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MMPA/MMPA_UnitTest.cpp
[ 84%] Linking CXX executable testMolHash
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolHash.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMolHash.dir/testMolHash.cpp.o  -o testMolHash  ../../../lib/libRDKitMolHash.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 84%] Built target testMolHash
make -f Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build.make Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MMPA/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMMPA
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build.make Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 84%] Building CXX object Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/rdMMPA.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMMPA_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMMPA.dir/rdMMPA.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MMPA/Wrap/rdMMPA.cpp
[ 84%] Linking CXX shared module ../../../../rdkit/Chem/rdMolHash.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolHash.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdMolHash.so CMakeFiles/rdMolHash.dir/rdMolHash.cpp.o  ../../../../lib/libRDKitMolHash.so.1.2019.09.1 ../../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 84%] Built target rdMolHash
make -f Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/build.make Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/DependInfo.cmake --color=
Scanning dependencies of target testStructChecker
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/build.make Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 84%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/testStructChecker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testStructChecker.dir/testStructChecker.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/testStructChecker.cpp
[ 84%] Linking CXX executable testMMPA
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMMPA.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testMMPA.dir/MMPA_UnitTest.cpp.o  -o testMMPA  ../../../lib/libRDKitMMPA.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 84%] Built target testMMPA
make -f Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/build.make Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/DependInfo.cmake --color=
Scanning dependencies of target rdStructChecker
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/build.make Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 84%] Building CXX object Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/structchecker.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdStructChecker_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdStructChecker.dir/structchecker.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/Wrap/structchecker.cpp
[ 85%] Linking CXX shared module ../../../../rdkit/Chem/rdMMPA.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMMPA.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdMMPA.so CMakeFiles/rdMMPA.dir/rdMMPA.cpp.o  ../../../../lib/libRDKitMMPA.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 85%] Built target rdMMPA
make -f Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/DependInfo.cmake --color=
Scanning dependencies of target testRGroupDecomp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 85%] Building CXX object Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/testRGroupDecomp.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_RGROUPDECOMPOSITION_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testRGroupDecomp.dir/testRGroupDecomp.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/testRGroupDecomp.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/catch_tests.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/catch_tests.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 85%] Linking CXX executable testStructChecker
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/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testStructChecker.dir/testStructChecker.cpp.o  -o testStructChecker  ../../../lib/libRDKitStructChecker.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
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[ 85%] Building CXX object Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/rdRGroupComposition.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdRGroupDecomposition_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdRGroupDecomposition.dir/rdRGroupComposition.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/Wrap/rdRGroupComposition.cpp
[ 86%] Linking CXX shared module ../../../../rdkit/Chem/rdStructChecker.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdStructChecker.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdStructChecker.so CMakeFiles/rdStructChecker.dir/structchecker.cpp.o  ../../../../lib/libRDKitStructChecker.so.1.2019.09.1 ../../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
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[ 87%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/MolStandardize.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/MolStandardize.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/MolStandardize.cpp
[ 87%] Linking CXX executable testRGroupDecomp
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/cmake -E cmake_link_script CMakeFiles/testRGroupDecomp.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testRGroupDecomp.dir/testRGroupDecomp.cpp.o  -o testRGroupDecomp  ../../../lib/libRDKitRGroupDecomposition.so.1.2019.09.1 ../../../lib/libRDKitFMCS.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
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[ 87%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Metal.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/Metal.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Metal.cpp
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[ 87%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/testReaction.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testReaction.dir/testReaction.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/testReaction.cpp
[ 87%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Normalize.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/Normalize.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Normalize.cpp
[ 88%] Linking CXX shared module ../../../../rdkit/Chem/rdRGroupDecomposition.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdRGroupDecomposition.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdRGroupDecomposition.so CMakeFiles/rdRGroupDecomposition.dir/rdRGroupComposition.cpp.o  ../../../../lib/libRDKitRGroupDecomposition.so.1.2019.09.1 ../../../../lib/libRDKitFMCS.so.1.2019.09.1 ../../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 88%] Built target rdRGroupDecomposition
[ 88%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Validate.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/Validate.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Validate.cpp
[ 88%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Charge.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/Charge.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Charge.cpp
[ 88%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Tautomer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/Tautomer.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Tautomer.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/testReaction.cpp:34:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/testReaction.cpp:34:
/usr/include/c++/9/bits/stl_vector.h: In member function 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/testReaction.cpp:34:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 88%] Linking CXX executable molHashCatchTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/cmake -E cmake_link_script CMakeFiles/molHashCatchTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/molHashCatchTest.dir/catch_tests.cpp.o  -o molHashCatchTest  ../../../lib/libRDKitMolHash.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 88%] Built target molHashCatchTest
make -f Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/DependInfo.cmake --color=
Scanning dependencies of target testReactionFingerprints
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 88%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/testReactionFingerprints.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testReactionFingerprints.dir/testReactionFingerprints.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/testReactionFingerprints.cpp
[ 89%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Fragment.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/Fragment.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Fragment.cpp
[ 89%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogEntry.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogEntry.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogEntry.cpp
[ 89%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogParams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogParams.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogParams.cpp
[ 89%] Linking CXX executable testReactionFingerprints
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_link_script CMakeFiles/testReactionFingerprints.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testReactionFingerprints.dir/testReactionFingerprints.cpp.o  -o testReactionFingerprints  ../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 -lboost_serialization ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 -lboost_serialization ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 89%] Built target testReactionFingerprints
make -f Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/DependInfo.cmake --color=
Scanning dependencies of target rxnTestCatch
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 89%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/rxnTestCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/catch_tests.cpp
[ 89%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.cpp
[ 89%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogEntry.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogEntry.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogEntry.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 89%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogParams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogParams.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogParams.cpp
[ 89%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.cpp
[ 90%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogEntry.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogEntry.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogEntry.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 90%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogParams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogParams.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogParams.cpp
[ 90%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/catch_tests.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/catch_tests.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
make -f Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/DependInfo.cmake --color=
Scanning dependencies of target testEnumeration
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 91%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/Enumerate/testEnumerate.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/testEnumeration.dir/Enumerate/testEnumerate.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/testEnumerate.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In function 'std::vector<std::shared_ptr<RDKit::ChemicalReaction> > RDKit::MolStandardize::readTransformations(std::istream&, int)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 91%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogEntry.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogEntry.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogEntry.cpp
[ 91%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogParams.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogParams.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogParams.cpp
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/testReaction.cpp:34:
/usr/include/c++/9/bits/stl_vector.h: In function 'void test25Conformers()':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
[ 91%] Linking CXX executable testEnumeration
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_link_script CMakeFiles/testEnumeration.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/testEnumeration.dir/Enumerate/testEnumerate.cpp.o  -o testEnumeration  ../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 -lboost_serialization ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 -lboost_serialization ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex 
[ 91%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogUtils.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogUtils.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.cpp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 91%] Built target testEnumeration
make -f Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build.make Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/DependInfo.cmake --color=
Scanning dependencies of target rdChemReactions
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build.make Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 91%] Building CXX object Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/Enumerate.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdChemReactions_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdChemReactions.dir/Enumerate.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.cpp:10:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In function 'std::vector<RDKit::MolStandardize::TautomerTransform> RDKit::MolStandardize::readTautomers(std::istream&, int)':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[ 92%] Linking CXX shared library ../../../lib/libRDKitMolStandardize.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolStandardize.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared -Wl,-soname,libRDKitMolStandardize.so.1 -o ../../../lib/libRDKitMolStandardize.so.1.2019.09.1 CMakeFiles/MolStandardize.dir/MolStandardize.cpp.o CMakeFiles/MolStandardize.dir/Metal.cpp.o CMakeFiles/MolStandardize.dir/Normalize.cpp.o CMakeFiles/MolStandardize.dir/Validate.cpp.o CMakeFiles/MolStandardize.dir/Charge.cpp.o CMakeFiles/MolStandardize.dir/Tautomer.cpp.o CMakeFiles/MolStandardize.dir/Fragment.cpp.o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogEntry.cpp.o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogParams.cpp.o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogUtils.cpp.o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogEntry.cpp.o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogParams.cpp.o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogUtils.cpp.o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogEntry.cpp.o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogParams.cpp.o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogUtils.cpp.o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogEntry.cpp.o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogParams.cpp.o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogUtils.cpp.o  ../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lboost_serialization 
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolStandardize.so.1.2019.09.1 ../../../lib/libRDKitMolStandardize.so.1 ../../../lib/libRDKitMolStandardize.so
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 92%] Built target MolStandardize
[ 92%] Building CXX object Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/rdChemReactions.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdChemReactions_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdChemReactions.dir/rdChemReactions.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/9/bits/stl_vector.h: In function 'void boost::python::container_utils::extend_container(Container&, boost::python::api::object) [with Container = std::vector<long long unsigned int>]':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h: In static member function 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_append(Container&, boost::python::api::object) [with Container = std::vector<long long unsigned int>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>]':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/9/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/9/bits/vector.tcc:184:5: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
  184 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:184:5: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/9/bits/stl_vector.h: In static member function 'static void boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_delete_item(Container&, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>; bool NoProxy = false; bool NoSlice = false; Data = long long unsigned int; Index = unsigned int; Key = long long unsigned int]':
/usr/include/c++/9/bits/stl_vector.h:1458:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1458 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |                                                                       ^
In file included from /usr/include/c++/9/algorithm:62,
                 from /usr/include/boost/function/detail/prologue.hpp:13,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/9/bits/stl_algo.h: In function '_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const long long unsigned int>]':
/usr/include/c++/9/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  112 |     __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last,
      |     ^~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_algo.h: In static member function 'static bool boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_contains(Container&, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>; bool NoProxy = false; bool NoSlice = false; Data = long long unsigned int; Index = unsigned int; Key = long long unsigned int]':
/usr/include/c++/9/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  161 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
  162 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  161 |       return __find_if(__first, __last, __pred,
      |              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
  162 |          std::__iterator_category(__first));
      |          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
  721 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc:721:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/9/bits/stl_vector.h: In static member function 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_extend(Container&, boost::python::api::object) [with Container = std::vector<long long unsigned int>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>]':
/usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
 1662 |    _M_range_insert(__pos, __first, __last,
      |    ^~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_vector.h: In static member function 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<long long unsigned int>, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>, boost::python::detail::container_element<std::vector<long long unsigned int>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false> >, unsigned int>; Data = long long unsigned int; Index = unsigned int]':
/usr/include/c++/9/bits/stl_vector.h:1458:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1458 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |                                                                       ^
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/9/bits/vector.tcc:161:2: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  161 |  _M_realloc_insert(begin() + (__position - cbegin()), __x);
      |  ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/9/bits/stl_vector.h:1458:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1458 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |                                                                       ^
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/9/bits/vector.tcc:161:2: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  161 |  _M_realloc_insert(begin() + (__position - cbegin()), __x);
      |  ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
 1662 |    _M_range_insert(__pos, __first, __last,
      |    ^~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/9/bits/stl_vector.h:1458:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
 1458 |  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
      |                                                                       ^
/usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
 1662 |    _M_range_insert(__pos, __first, __last,
      |    ^~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1662:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
In file included from /usr/include/boost/python/suite/indexing/indexing_suite.hpp:12,
                 from /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:9,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:24,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:32:
/usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:689:9: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
  689 |         }
      |         ^
/usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:689:9: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
/usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:689:9: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
/usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:689:9: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Geometry/point.h:16,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp:32:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
make -f Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DependInfo.cmake --color=
[ 92%] Linking CXX shared module ../../../../rdkit/Chem/rdChemReactions.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdChemReactions.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/rdChemReactions.so CMakeFiles/rdChemReactions.dir/Enumerate.cpp.o CMakeFiles/rdChemReactions.dir/rdChemReactions.cpp.o  ../../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
Scanning dependencies of target MolDraw2D
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 93%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2D.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++  -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolDraw2D.dir/MolDraw2D.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 93%] Built target rdChemReactions
[ 93%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2DSVG.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++  -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolDraw2D.dir/MolDraw2DSVG.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DSVG.cpp
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp: In member function 'virtual void RDKit::MolDraw2D::drawBond(const RDKit::ROMol&, const RDKit::Bond*, int, int, const std::vector<int>*, const std::map<int, RDKit::DrawColour>*, const std::vector<int>*, const std::map<int, RDKit::DrawColour>*)':
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:1290:19: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
 1290 |       if (at1_idx == bond->getBeginAtomIdx()) {
      |           ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:14:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/9/bits/vector.tcc:509:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
  509 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:14:
/usr/include/c++/9/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/9/bits/stl_vector.h:957:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
  957 |    _M_fill_insert(end(), __new_size - size(), __x);
      |    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:14:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDGeom::Point2D&}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point2D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:14:
/usr/include/c++/9/bits/stl_vector.h: In member function 'void RDKit::MolDraw2D::extractAtomCoords(const RDKit::ROMol&, int, bool)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 93%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2DDetails.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++  -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/MolDraw2D.dir/MolDraw2DDetails.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DDetails.cpp
In file included from /usr/include/c++/9/set:60,
                 from /<<PKGBUILDDIR>>/Code/Query/SetQuery.h:13,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:29,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:14:
/usr/include/c++/9/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = int; _Val = std::pair<const int, RDKit::DrawColour>; _KeyOfValue = std::_Select1st<std::pair<const int, RDKit::DrawColour> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/9/bits/stl_tree.h:2187:5: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
 2187 |     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDKit::DrawColour>; _KeyOfValue = std::_Select1st<std::pair<const int, RDKit::DrawColour> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const int&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDKit::DrawColour>; _KeyOfValue = std::_Select1st<std::pair<const int, RDKit::DrawColour> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:26,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:14:
/usr/include/c++/9/bits/stl_map.h: In member function 'RDKit::DrawColour RDKit::MolDraw2D::getColourByAtomicNum(int)':
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:14:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void RDKit::MolDraw2D::drawReaction(const RDKit::ChemicalReaction&, bool, const std::vector<RDKit::DrawColour>*, const std::vector<int>*)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:26,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:19,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:14:
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  499 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DDetails.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DDetails.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDGeom::Point2D&}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point2D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DDetails.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DDetails.cpp:11:
/usr/include/c++/9/bits/stl_vector.h: In function 'void RDKit::MolDraw2D_detail::arcPoints(const RDGeom::Point2D&, const RDGeom::Point2D&, std::vector<RDGeom::Point2D>&, float, float)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
make -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
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[ 93%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/molStandardizeTest.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/test1.cpp
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/molValidateTest.dir/testValidate.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/testValidate.cpp
[ 94%] Linking CXX executable molStandardizeTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molStandardizeTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/molStandardizeTest.dir/test1.cpp.o  -o molStandardizeTest  ../../../lib/libRDKitMolStandardize.so.1.2019.09.1 ../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex -lboost_serialization ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
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[ 94%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/testNormalize.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/molNormalizeTest.dir/testNormalize.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/testNormalize.cpp
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/DependInfo.cmake --color=
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/molChargeTest.dir/testCharge.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/testCharge.cpp
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/DependInfo.cmake --color=
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[ 95%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/testTautomer.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/molTautomerTest.dir/testTautomer.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/testTautomer.cpp
[ 96%] Linking CXX executable molNormalizeTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molNormalizeTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/molNormalizeTest.dir/testNormalize.cpp.o  -o molNormalizeTest  ../../../lib/libRDKitMolStandardize.so.1.2019.09.1 ../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex -lboost_serialization ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/DependInfo.cmake --color=
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[ 97%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/testFragment.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/molFragmentTest.dir/testFragment.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/testFragment.cpp
[ 97%] Linking CXX executable molValidateTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molValidateTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/molValidateTest.dir/testValidate.cpp.o  -o molValidateTest  ../../../lib/libRDKitMolStandardize.so.1.2019.09.1 ../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 -lboost_serialization ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/DependInfo.cmake --color=
Scanning dependencies of target molStandardizeCatchTest
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 97%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/molStandardizeCatchTest.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/catch_tests.cpp
[ 97%] Linking CXX executable molChargeTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molChargeTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/molChargeTest.dir/testCharge.cpp.o  -o molChargeTest  ../../../lib/libRDKitMolStandardize.so.1.2019.09.1 ../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 -lboost_serialization ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMolStandardize
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[ 97%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/rdMolStandardize.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMolStandardize.dir/rdMolStandardize.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap/rdMolStandardize.cpp
[ 97%] Linking CXX executable molFragmentTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molFragmentTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/molFragmentTest.dir/testFragment.cpp.o  -o molFragmentTest  ../../../lib/libRDKitMolStandardize.so.1.2019.09.1 ../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lboost_serialization 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 97%] Built target molFragmentTest
[ 97%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Validate.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMolStandardize.dir/Validate.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap/Validate.cpp
[ 97%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Charge.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMolStandardize.dir/Charge.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap/Charge.cpp
[ 97%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Fragment.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMolStandardize.dir/Fragment.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap/Fragment.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/catch_tests.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/catch_tests.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
[ 97%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Normalize.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMolStandardize.dir/Normalize.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap/Normalize.cpp
[ 97%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Metal.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMolStandardize.dir/Metal.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap/Metal.cpp
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/DependInfo.cmake --color=
[ 98%] Linking CXX shared module ../../../../rdkit/Chem/MolStandardize/rdMolStandardize.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolStandardize.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/MolStandardize/rdMolStandardize.so CMakeFiles/rdMolStandardize.dir/rdMolStandardize.cpp.o CMakeFiles/rdMolStandardize.dir/Validate.cpp.o CMakeFiles/rdMolStandardize.dir/Charge.cpp.o CMakeFiles/rdMolStandardize.dir/Fragment.cpp.o CMakeFiles/rdMolStandardize.dir/Normalize.cpp.o CMakeFiles/rdMolStandardize.dir/Metal.cpp.o  ../../../../lib/libRDKitMolStandardize.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lboost_serialization 
Scanning dependencies of target moldraw2DRxnTest1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
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make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 98%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/rxn_test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/moldraw2DRxnTest1.dir/rxn_test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/rxn_test1.cpp
[ 98%] Linking CXX executable molTautomerTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molTautomerTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/molTautomerTest.dir/testTautomer.cpp.o  -o molTautomerTest  ../../../lib/libRDKitMolStandardize.so.1.2019.09.1 ../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 -lboost_serialization ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 98%] Built target rdMolStandardize
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/depend
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cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/DependInfo.cmake --color=
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Scanning dependencies of target moldraw2DTestCatch
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make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 98%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/catch_tests.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/moldraw2DTestCatch.dir/catch_tests.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/catch_tests.cpp
[ 98%] Built target molTautomerTest
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/DependInfo.cmake --color=
Scanning dependencies of target moldraw2DTest1
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make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 99%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/test1.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -std=gnu++11 -o CMakeFiles/moldraw2DTest1.dir/test1.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/test1.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/rxn_test1.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::DrawColour>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:60,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/rxn_test1.cpp:12:
/usr/include/c++/9/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDKit::DrawColour>; _KeyOfValue = std::_Select1st<std::pair<const int, RDKit::DrawColour> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/rxn_test1.cpp:12:
/usr/include/c++/9/bits/stl_map.h: In function 'void {anonymous}::drawit(RDKit::ChemicalReaction*, std::string, bool, const std::vector<RDKit::DrawColour>*)':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/test1.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::DrawColour>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >'} changed in GCC 7.1
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:60,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/test1.cpp:12:
/usr/include/c++/9/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDKit::DrawColour>; _KeyOfValue = std::_Select1st<std::pair<const int, RDKit::DrawColour> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/test1.cpp:12:
/usr/include/c++/9/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](std::map<_Key, _Tp, _Compare, _Alloc>::key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In constructor 'RDKit::MolDrawOptions::MolDrawOptions()':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/9/map:60,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/test1.cpp:12:
/usr/include/c++/9/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, double> >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 99%] Linking CXX executable moldraw2DRxnTest1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/cmake -E cmake_link_script CMakeFiles/moldraw2DRxnTest1.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/moldraw2DRxnTest1.dir/rxn_test1.cpp.o  -o moldraw2DRxnTest1  ../../../lib/libRDKitMolDraw2D.so.1.2019.09.1 ../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 -lboost_serialization ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
In file included from /usr/include/c++/9/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/test1.cpp:12:
/usr/include/c++/9/bits/stl_map.h: In function 'void test3()':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, double> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, double> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 99%] Built target moldraw2DRxnTest1
make -f Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMolDraw2D
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 99%] Building CXX object Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/rdMolDraw2D.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolDraw2D_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdMolDraw2D.dir/rdMolDraw2D.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:21,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/test1.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In function 'void testGithub1322()':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/Dict.h:19,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/types.h:28,
                 from /<<PKGBUILDDIR>>/Code/RDGeneral/utils.h:15,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/test1.cpp:12:
/usr/include/c++/9/bits/stl_map.h: In function 'void test14BWPalette()':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp: In function 'void RDKit::contourAndDrawGridHelper(RDKit::MolDraw2D&, boost::python::api::object&, boost::python::api::object&, boost::python::api::object&, unsigned int, boost::python::api::object&, const RDKit::MolDraw2DUtils::ContourParams&)':
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:405:31: warning: comparison of integer expressions of different signedness: 'npy_intp' {aka 'int'} and 'std::vector<double>::size_type' {aka 'unsigned int'} [-Wsign-compare]
  405 |   if (PyArray_DIM(dataArr, 0) != xcoords->size()) {
      |       ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:411:31: warning: comparison of integer expressions of different signedness: 'npy_intp' {aka 'int'} and 'std::vector<double>::size_type' {aka 'unsigned int'} [-Wsign-compare]
  411 |   if (PyArray_DIM(dataArr, 1) != ycoords->size()) {
      |       ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~
[ 99%] Linking CXX executable moldraw2DTest1
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/cmake -E cmake_link_script CMakeFiles/moldraw2DTest1.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/moldraw2DTest1.dir/test1.cpp.o  -o moldraw2DTest1  ../../../lib/libRDKitMolDraw2D.so.1.2019.09.1 ../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 -lboost_serialization ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 99%] Built target moldraw2DTest1
make -f Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/DependInfo.cmake --color=
Scanning dependencies of target rdmolops
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 99%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/rdmolops.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolops_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdmolops.dir/rdmolops.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/rdmolops.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/catch_tests.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::DrawColour>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:67,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/catch_tests.cpp:12:
/usr/include/c++/9/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDGeom::Point2D&}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point2D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Conformer.h:14,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h:36,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:17:
/<<PKGBUILDDIR>>/Code/Geometry/point.h: In function 'std::unique_ptr<std::vector<T> > pythonObjectToVect(const boost::python::api::object&) [with T = RDGeom::Point2D]':
/<<PKGBUILDDIR>>/Code/Geometry/point.h:266:57: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point2D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
  266 |   Point2D(const Point2D &other) : Point(other), x(other.x), y(other.y) {}
      |                                                   ~~~~~~^
/<<PKGBUILDDIR>>/Code/Geometry/point.h:266:69: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point2D::y' may be used uninitialized in this function [-Wmaybe-uninitialized]
  266 |   Point2D(const Point2D &other) : Point(other), x(other.x), y(other.y) {}
      |                                                               ~~~~~~^
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:11:
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:11:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:14:
/<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h: In function 'std::unique_ptr<std::vector<T> > pythonObjectToVect(const boost::python::api::object&) [with T = double]':
/<<PKGBUILDDIR>>/Code/RDBoost/Wrap.h:116:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  116 |       T v = python::extract<T>(obj[i]);
      |         ^
In file included from /usr/include/c++/9/vector:67,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:11:
/usr/include/c++/9/bits/stl_vector.h:1195:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
 1195 |    _M_realloc_insert(end(), __x);
      |    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:60,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:11:
/usr/include/c++/9/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDKit::DrawColour>; _KeyOfValue = std::_Select1st<std::pair<const int, RDKit::DrawColour> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:11:
/usr/include/c++/9/bits/stl_map.h: In function 'void RDKit::useBWAtomPalette(RDKit::MolDrawOptions&)':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In function 'void RDKit::{anonymous}::pyDictToColourMap(boost::python::api::object, RDKit::ColourPalette&)':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In function 'void RDKit::assignDefaultPalette(RDKit::ColourPalette&)':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp: In function 'void RDKit::{anonymous}::pyDictToDoubleMap(boost::python::api::object, std::map<int, double>&)':
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:72:57: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
   72 |     double r = python::extract<double>(tDict.values()[i]);
      |                                                         ^
[100%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/MolOps.cpp.o
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolops_EXPORTS -I/<<PKGBUILDDIR>>/External/catch/catch/single_include -I/<<PKGBUILDDIR>>/External -I/usr/include/python3.8 -I/usr/lib/python3/dist-packages/numpy/core/include -I/<<PKGBUILDDIR>>/Code -I/<<PKGBUILDDIR>>/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -std=gnu++11 -o CMakeFiles/rdmolops.dir/MolOps.cpp.o -c /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MolOps.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:465,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/catch_tests.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::DrawColour>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
[100%] Linking CXX shared module ../../../../rdkit/Chem/Draw/rdMolDraw2D.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolDraw2D.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../../rdkit/Chem/Draw/rdMolDraw2D.so CMakeFiles/rdMolDraw2D.dir/rdMolDraw2D.cpp.o  ../../../../lib/libRDKitMolDraw2D.so.1.2019.09.1 ../../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lboost_serialization 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[100%] Built target rdMolDraw2D
In file included from /usr/include/c++/9/vector:72,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MolOps.cpp:12:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::DrawColour>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
In file included from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MolOps.cpp:30:
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:379:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  379 |       result = off_type(bp::extract<off_type>(py_tell()));
      |                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:186:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  186 |       off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                        ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:156:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  156 |         off_type py_pos = bp::extract<off_type>(py_tell());
      |                                                          ^
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekpos(boost_adaptbx::python::streambuf::pos_type, std::ios_base::openmode)':
/<<PKGBUILDDIR>>/Code/RDBoost/python_streambuf.h:379:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
  379 |       result = off_type(bp::extract<off_type>(py_tell()));
      |                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:60,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MolOps.cpp:12:
/usr/include/c++/9/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDKit::DrawColour>; _KeyOfValue = std::_Select1st<std::pair<const int, RDKit::DrawColour> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:60,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:4245,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/catch_tests.cpp:12:
/usr/include/c++/9/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDKit::DrawColour>; _KeyOfValue = std::_Select1st<std::pair<const int, RDKit::DrawColour> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/9/bits/stl_tree.h:2452:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
 2452 |       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/9/map:61,
                 from /<<PKGBUILDDIR>>/External/catch/catch/single_include/catch.hpp:4245,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/catch_tests.cpp:12:
/usr/include/c++/9/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](std::map<_Key, _Tp, _Compare, _Alloc>::key_type&&) [with _Key = int; _Tp = RDKit::DrawColour; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDKit::DrawColour> >]':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h: In constructor 'RDKit::MolDrawOptions::MolDrawOptions()':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/9/map:61,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<PKGBUILDDIR>>/Code/RDBoost/python.h:3,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Wrap/MolOps.cpp:12:
/usr/include/c++/9/bits/stl_map.h: In function 'std::string RDKit::molToSVG(const RDKit::ROMol&, unsigned int, unsigned int, boost::python::api::object, bool, unsigned int, unsigned int, bool, int)':
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/9/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDKit::DrawColour>, std::_Select1st<std::pair<const int, RDKit::DrawColour> >, std::less<int>, std::allocator<std::pair<const int, RDKit::DrawColour> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDKit::DrawColour> >'} changed in GCC 7.1
  518 |    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[100%] Linking CXX executable molStandardizeCatchTest
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molStandardizeCatchTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/molStandardizeCatchTest.dir/catch_tests.cpp.o  -o molStandardizeCatchTest  ../../../lib/libRDKitMolStandardize.so.1.2019.09.1 ../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lboost_serialization 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[100%] Built target molStandardizeCatchTest
[100%] Linking CXX shared module ../../../rdkit/Chem/rdmolops.so
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdmolops.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -Wl,-z,now -shared  -o ../../../rdkit/Chem/rdmolops.so CMakeFiles/rdmolops.dir/rdmolops.cpp.o CMakeFiles/rdmolops.dir/MolOps.cpp.o  ../../../lib/libRDKitMolDraw2D.so.1.2019.09.1 ../../../lib/libRDKitRDBoost.so.1.2019.09.1 -lpython3.8 -lboost_python3 -lboost_serialization ../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread -lboost_serialization 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[100%] Built target rdmolops
[100%] Linking CXX executable moldraw2DTestCatch
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/cmake -E cmake_link_script CMakeFiles/moldraw2DTestCatch.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -Wl,-z,now -rdynamic CMakeFiles/moldraw2DTestCatch.dir/catch_tests.cpp.o  -o moldraw2DTestCatch  ../../../lib/libRDKitMolDraw2D.so.1.2019.09.1 ../../../lib/libRDKitChemReactions.so.1.2019.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2019.09.1 ../../../lib/libRDKitCatalogs.so.1.2019.09.1 ../../../lib/libRDKitDescriptors.so.1.2019.09.1 ../../../lib/libRDKitPartialCharges.so.1.2019.09.1 ../../../lib/libRDKitFingerprints.so.1.2019.09.1 ../../../lib/libRDKitChemTransforms.so.1.2019.09.1 -lboost_serialization ../../../lib/libRDKitFileParsers.so.1.2019.09.1 ../../../lib/libRDKitDepictor.so.1.2019.09.1 ../../../lib/libRDKitMolAlign.so.1.2019.09.1 ../../../lib/libRDKitAlignment.so.1.2019.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2019.09.1 ../../../lib/libRDKitSmilesParse.so.1.2019.09.1 ../../../lib/libRDKitForceField.so.1.2019.09.1 ../../../lib/libRDKitOptimizer.so.1.2019.09.1 ../../../lib/libRDKitTrajectory.so.1.2019.09.1 -lcoordgen -lmaeparser -lboost_system -lboost_iostreams -lboost_regex ../../../lib/libRDKitSubstructMatch.so.1.2019.09.1 ../../../lib/libRDKitSubgraphs.so.1.2019.09.1 ../../../lib/libRDKitMolTransforms.so.1.2019.09.1 ../../../lib/libRDKitGraphMol.so.1.2019.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2019.09.1 ../../../lib/libRDKitDataStructs.so.1.2019.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2019.09.1 ../../../lib/libRDKitRDGeneral.so.1.2019.09.1 -lpthread 
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[100%] Built target moldraw2DTestCatch
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles 0
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
STATIC_LINK=0 RDKIT_LIBDIR=/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf//lib pg_buildext build /<<PKGBUILDDIR>>/Code/PgSQL/rdkit build-%v
supported-versions: WARNING! Unknown distribution: raspbian
debian found in ID_LIKE, treating as Debian
### build 12 ###
make[2]: Entering directory '/<<PKGBUILDDIR>>/build-12'
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o rdkit_io.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_io.c
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o mol_op.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'mol_murckoscaffold':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:263:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  263 |   CROMol scaffold = MolMurckoScaffold(mol);
      |   ^~~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'mol_hash':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:283:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  283 |   char *res = pnstrdup(str, len);
      |   ^~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'mol_nm_hash':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:298:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  298 |   char *str = computeNMMolHash(mol, opts);
      |   ^~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:300:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  300 |   char *res = pnstrdup(str, strlen(str));
      |   ^~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:293:7: warning: unused variable 'len' [-Wunused-variable]
  293 |   int len;
      |       ^~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'mol_adjust_query_properties':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:313:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  313 |   char *data = PG_GETARG_CSTRING(1);
      |   ^~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:317:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  317 |   Mol *res = deconstructROMol(adj);
      |   ^~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'mol_to_svg':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:332:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  332 |   char *legend = PG_GETARG_CSTRING(1);
      |   ^~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'fmcs_smiles':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:356:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  356 |   char *res = pnstrdup(str, strlen(str));
      |   ^~~~
In file included from /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:34:
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'fmcs_mol2s_transition':
/usr/include/postgresql/12/server/fmgr.h:263:29: warning: initialization of 'CROMol' {aka 'void *'} from 'Datum' {aka 'unsigned int'} makes pointer from integer without a cast [-Wint-conversion]
  263 | #define PG_GETARG_DATUM(n)  (fcinfo->args[n].value)
      |                             ^
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:408:18: note: in expansion of macro 'PG_GETARG_DATUM'
  408 |     CROMol mol = PG_GETARG_DATUM(1);
      |                  ^~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:424:5: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  424 |     text *ts = (text *)palloc(ts_size);  // new return value
      |     ^~~~
In file included from /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:34:
/usr/include/postgresql/12/server/fmgr.h:263:29: warning: initialization of 'CROMol' {aka 'void *'} from 'Datum' {aka 'unsigned int'} makes pointer from integer without a cast [-Wint-conversion]
  263 | #define PG_GETARG_DATUM(n)  (fcinfo->args[n].value)
      |                             ^
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:436:18: note: in expansion of macro 'PG_GETARG_DATUM'
  436 |     CROMol mol = PG_GETARG_DATUM(1);
      |                  ^~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:444:5: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  444 |     char *smiles = makeMolText(mol, &len, false, false);
      |     ^~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'fmcs_mols':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:482:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  482 |   int32 ts_size = VARHDRSZ + strlen(str);
      |   ^~~~~
In file included from /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:34:
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'fmcs_mol_transition':
/usr/include/postgresql/12/server/fmgr.h:263:29: warning: initialization of 'CROMol' {aka 'void *'} from 'Datum' {aka 'unsigned int'} makes pointer from integer without a cast [-Wint-conversion]
  263 | #define PG_GETARG_DATUM(n)  (fcinfo->args[n].value)
      |                             ^
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:504:18: note: in expansion of macro 'PG_GETARG_DATUM'
  504 |     CROMol mol = PG_GETARG_DATUM(1);
      |                  ^~~~~~~~~~~~~~~
/usr/include/postgresql/12/server/fmgr.h:263:29: warning: initialization of 'CROMol' {aka 'void *'} from 'Datum' {aka 'unsigned int'} makes pointer from integer without a cast [-Wint-conversion]
  263 | #define PG_GETARG_DATUM(n)  (fcinfo->args[n].value)
      |                             ^
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:515:18: note: in expansion of macro 'PG_GETARG_DATUM'
  515 |     CROMol mol = PG_GETARG_DATUM(1);
      |                  ^~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'fmcs_smiles_transition':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:388:1: warning: control reaches end of non-void function [-Wreturn-type]
  388 | }
      | ^
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c: In function 'fmcs_mol_transition':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:523:1: warning: control reaches end of non-void function [-Wreturn-type]
  523 | }
      | ^
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o bfp_op.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bfp_op.c
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o sfp_op.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/sfp_op.c
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o rxn_op.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rxn_op.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rxn_op.c:164:1: warning: multi-line comment [-Wcomment]
  164 | //  /* keep compiler quiet - no extra ; */                                \
      | ^
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rxn_op.c: In function 'reaction_to_svg':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rxn_op.c:179:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  179 |   bool highlightByReactants = PG_GETARG_BOOL(1);
      |   ^~~~
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o rdkit_gist.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c: In function 'soergeldistsign':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:240:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  240 |   uint8 *as = (uint8 *)VARDATA(a);
      |   ^~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c: In function 'soergeldist':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:275:16: warning: implicit declaration of function 'floor' [-Wimplicit-function-declaration]
  275 |   return (int) floor(10000*soergeldistsign(a, b));
      |                ^~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:275:16: warning: incompatible implicit declaration of built-in function 'floor'
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:42:1: note: include '<math.h>' or provide a declaration of 'floor'
   41 | #include "bitstring.h"
  +++ |+#include <math.h>
   42 | 
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:262:10: warning: unused variable 'd' [-Wunused-variable]
  262 |   double d;
      |          ^
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c: In function 'gmol_consistent':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:526:7: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  526 |       uint8 *k = (uint8 *)VARDATA(key);
      |       ^~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:538:7: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  538 |       uint8 *k = (uint8 *)VARDATA(key);
      |       ^~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:570:7: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  570 |       uint8 *k = (uint8 *)VARDATA(key);
      |       ^~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c: In function 'rdkit_consistent':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:658:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  658 |   int siglen = SIGLEN(query);
      |   ^~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:673:5: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  673 |     uint8 *k = (uint8 *)VARDATA(key);
      |     ^~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c: In function 'gsfp_consistent':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:708:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  708 |   int sum, overlapSum, overlapN;
      |   ^~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:714:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  714 |   int nKey = (ISALLTRUE(key)) ?
      |   ^~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c: In function 'greaction_consistent':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:787:7: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  787 |       uint8 *k = (uint8 *)VARDATA(key);
      |       ^~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:804:7: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  804 |       uint8 *k = (uint8 *)VARDATA(key);
      |       ^~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:832:7: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  832 |       uint8 *k = (uint8 *)VARDATA(key);
      |       ^~~~~
At top level:
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:646:1: warning: 'rdkit_consistent' defined but not used [-Wunused-function]
  646 | rdkit_consistent(GISTENTRY *entry, StrategyNumber strategy, bytea *key, bytea *query)
      | ^~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c:261:1: warning: 'soergeldist' defined but not used [-Wunused-function]
  261 | soergeldist(bytea *a, bytea *b) {
      | ^~~~~~~~~~~
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o bfp_gist.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bfp_gist.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bfp_gist.c: In function 'merge_key':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bfp_gist.c:699:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
  699 |   int siglen = GBFP_INNER_SIGLEN(result);
      |   ^~~
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o bfp_gin.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bfp_gin.c
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o low_gist.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/low_gist.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/low_gist.c: In function 'gslfp_consistent':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/low_gist.c:410:30: warning: implicit declaration of function 'searchSfpCache' [-Wimplicit-function-declaration]
  410 |   fcinfo->flinfo->fn_extra = searchSfpCache(
      |                              ^~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/low_gist.c:410:28: warning: assignment to 'void *' from 'int' makes pointer from integer without a cast [-Wint-conversion]
  410 |   fcinfo->flinfo->fn_extra = searchSfpCache(
      |                            ^
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o guc.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/guc.c
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o cache.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/cache.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/cache.c: In function 'createCache':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/cache.c:312:17: warning: assignment discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers]
  312 |     methodsOrig = ctx->methods;
      |                 ^
In file included from /usr/include/postgresql/12/server/postgres.h:47,
                 from /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/cache.c:33:
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/cache.c:341:19: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'unsigned int' [-Wformat=]
  341 |       elog(ERROR, "Could not allocate %ld bytes", sizeof(*newholder));
      |                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  ~~~~~~~~~~~~~~~~~~
      |                                                   |
      |                                                   unsigned int
/usr/include/postgresql/12/server/utils/elog.h:221:23: note: in definition of macro 'elog'
  221 |   elog_finish(elevel, __VA_ARGS__); \
      |                       ^~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/cache.c:341:41: note: format string is defined here
  341 |       elog(ERROR, "Could not allocate %ld bytes", sizeof(*newholder));
      |                                       ~~^
      |                                         |
      |                                         long int
      |                                       %d
g++ -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-function -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"' -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o adapter.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/adapter.cpp
In file included from /usr/include/c++/9/vector:72,
                 from /<<PKGBUILDDIR>>/Code/Query/Query.h:18,
                 from /<<PKGBUILDDIR>>/Code/Query/QueryObjects.h:20,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h:25,
                 from /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h:23,
                 from /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/adapter.cpp:32:
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/9/bits/vector.tcc:426:7: note: parameter passing for argument of type 'std::vector<RDKit::DrawColour>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >'} changed in GCC 7.1
  426 |       vector<_Tp, _Alloc>::
      |       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/9/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::DrawColour}; _Tp = RDKit::DrawColour; _Alloc = std::allocator<RDKit::DrawColour>]':
/usr/include/c++/9/bits/vector.tcc:121:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::DrawColour*, std::vector<RDKit::DrawColour> >' changed in GCC 7.1
  121 |    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
      |    ^~~~~~~~~~~~~~~~~
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o bitstring.o /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bitstring.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bitstring.c: In function 'bitstringUnion':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bitstring.c:72:7: warning: unused variable 'i' [-Wunused-variable]
   72 |   int i;
      |       ^
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bitstring.c: In function 'bitstringIntersection':
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bitstring.c:106:7: warning: unused variable 'i' [-Wunused-variable]
  106 |   int i;
      |       ^
g++ -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Werror=vla -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -shared -o rdkit.so rdkit_io.o mol_op.o bfp_op.o sfp_op.o rxn_op.o rdkit_gist.o bfp_gist.o bfp_gin.o low_gist.o guc.o cache.o adapter.o bitstring.o -L/usr/lib/arm-linux-gnueabihf  -Wl,-z,relro -Wl,-z,now -L/usr/lib/llvm-10/lib  -L/usr/lib/arm-linux-gnueabihf/mit-krb5 -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<PKGBUILDDIR>>=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -L/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf//lib   -lRDKitMolDraw2D -lRDKitMolTransforms -lRDKitMolHash -lRDKitFMCS -lRDKitChemReactions -lRDKitChemTransforms -lRDKitFileParsers -lRDKitSmilesParse -lRDKitFingerprints -lRDKitSubgraphs -lRDKitDescriptors -lRDKitPartialCharges -lRDKitSubstructMatch  -lRDKitGraphMol -lRDKitEigenSolvers -lRDKitDataStructs -lRDKitDepictor -lRDKitRDGeometryLib -lRDKitRDGeneral -pthread  
sed -e's/@RDKIT_PG_BFP_GIST_FETCH@/FUNCTION    9   gbfp_fetch (internal),/;' \
-e's/@RDKIT_GIN_BFP_TRICONSISTENT@/FUNCTION    6   gin_bfp_triconsistent(internal, int2, bfp, int4, internal, internal, internal),/' \
-e's/@RDKIT_PARALLEL_SAFE@/PARALLEL SAFE/' \
 /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit.sql.in > rdkit--3.8.sql
/usr/bin/clang-10 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o rdkit_io.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_io.c
/usr/bin/clang-10 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o mol_op.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:388:1: warning: non-void function does not return a value in all control paths [-Wreturn-type]
}
^
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:408:12: warning: incompatible integer to pointer conversion initializing 'CROMol' (aka 'void *') with an expression of type 'Datum' (aka 'unsigned int') [-Wint-conversion]
    CROMol mol = PG_GETARG_DATUM(1);
           ^     ~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:436:12: warning: incompatible integer to pointer conversion initializing 'CROMol' (aka 'void *') with an expression of type 'Datum' (aka 'unsigned int') [-Wint-conversion]
    CROMol mol = PG_GETARG_DATUM(1);
           ^     ~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:504:12: warning: incompatible integer to pointer conversion initializing 'CROMol' (aka 'void *') with an expression of type 'Datum' (aka 'unsigned int') [-Wint-conversion]
    CROMol mol = PG_GETARG_DATUM(1);
           ^     ~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:515:12: warning: incompatible integer to pointer conversion initializing 'CROMol' (aka 'void *') with an expression of type 'Datum' (aka 'unsigned int') [-Wint-conversion]
    CROMol mol = PG_GETARG_DATUM(1);
           ^     ~~~~~~~~~~~~~~~~~~
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/mol_op.c:523:1: warning: non-void function does not return a value in all control paths [-Wreturn-type]
}
^
6 warnings generated.
/usr/bin/clang-10 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o bfp_op.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bfp_op.c
/usr/bin/clang-10 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o sfp_op.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/sfp_op.c
/usr/bin/clang-10 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o rxn_op.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rxn_op.c
/usr/bin/clang-10 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o rdkit_gist.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit_gist.c
/usr/bin/clang-10 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o bfp_gist.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bfp_gist.c
/usr/bin/clang-10 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o bfp_gin.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bfp_gin.c
/usr/bin/clang-10 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o low_gist.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/low_gist.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/low_gist.c:410:30: warning: implicit declaration of function 'searchSfpCache' is invalid in C99 [-Wimplicit-function-declaration]
  fcinfo->flinfo->fn_extra = searchSfpCache(
                             ^
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/low_gist.c:410:28: warning: incompatible integer to pointer conversion assigning to 'void *' from 'int' [-Wint-conversion]
  fcinfo->flinfo->fn_extra = searchSfpCache(
                           ^ ~~~~~~~~~~~~~~~
2 warnings generated.
/usr/bin/clang-10 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o guc.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/guc.c
/usr/bin/clang-10 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o cache.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/cache.c
/<<PKGBUILDDIR>>/Code/PgSQL/rdkit/cache.c:312:17: warning: assigning to 'MemoryContextMethods *' (aka 'struct MemoryContextMethods *') from 'const MemoryContextMethods *' (aka 'const struct MemoryContextMethods *') discards qualifiers [-Wincompatible-pointer-types-discards-qualifiers]
    methodsOrig = ctx->methods;
                ^ ~~~~~~~~~~~~
1 warning generated.
/usr/bin/clang-10 -xc++ -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -emit-llvm -c -o adapter.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/adapter.cpp
In file included from /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/adapter.cpp:54:
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DSVG.h:74:8: warning: 'tagAtoms' overrides a member function but is not marked 'override' [-Winconsistent-missing-override]
  void tagAtoms(const ROMol &mol) { tagAtoms(mol, 0.2); }
       ^
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:429:16: note: overridden virtual function is here
  virtual void tagAtoms(const ROMol &mol) { RDUNUSED_PARAM(mol); };
               ^
1 warning generated.
opt-10 -module-summary -f adapter.bc -o adapter.bc
/usr/bin/clang-10 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<PKGBUILDDIR>>/Code -DRDKITVER='"007300"'   -I. -I/<<PKGBUILDDIR>>/Code/PgSQL/rdkit -I/usr/include/postgresql/12/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o bitstring.bc /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/bitstring.c
make[2]: Leaving directory '/<<PKGBUILDDIR>>/build-12'
(cd /<<PKGBUILDDIR>>/Code; doxygen doxygen/doxygen.config)
warning: Tag 'SYMBOL_CACHE_SIZE' at line 337 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'SHOW_DIRECTORIES' at line 557 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'HTML_ALIGN_MEMBERS' at line 971 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'USE_INLINE_TREES' at line 1162 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'XML_SCHEMA' at line 1425 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'XML_DTD' at line 1431 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'PERL_PATH' at line 1596 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag 'MSCGEN_PATH' at line 1617 of file 'doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: doxygen no longer ships with the FreeSans font.
You may want to clear or change DOT_FONTNAME.
Otherwise you run the risk that the wrong font is being used for dot generated graphs.
Searching for include files...
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Searching INPUT for files to process...
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Reading and parsing tag files
Parsing files
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Atom.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/atomic_data.h...
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Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/BondIterators.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Canon.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Canon.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Enumerate/CartesianProduct.h...
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Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/RegisterDescriptor.h...
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Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/WHIM.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/details.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/details.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Embedder.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Embedder.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParserUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParserUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileStereochem.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolFileStereochem.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupParsing.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupParsing.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSGroupWriting.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSupplier.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolSupplier.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolWriters.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/MolWriters.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/ProximityBonds.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/ProximityBonds.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SequenceParsers.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SequenceParsers.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SequenceWriters.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SequenceWriters.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalog.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalog.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalogEntry.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterCatalogEntry.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Filters.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Filters.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FunctionalGroupHierarchy.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FunctionalGroupHierarchy.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairGenerator.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairGenerator.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairs.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairs.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintGenerator.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintGenerator.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintUtil.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintUtil.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MACCS.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MACCS.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganFingerprints.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganFingerprints.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/RDKitFPGenerator.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/RDKitFPGenerator.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Composition2N.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Composition2N.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/DebugTrace.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/DebugTrace.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/DuplicatedSeedCache.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/DuplicatedSeedCache.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/FMCS.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/FMCS.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Graph.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Graph.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/MatchTable.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/MatchTable.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/MaximumCommonSubgraph.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/MaximumCommonSubgraph.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/RingMatchTableSet.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/RingMatchTableSet.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Seed.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Seed.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/SeedSet.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/SeedSet.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/SubstructMatchCustom.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/SubstructMatchCustom.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/SubstructureCache.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/SubstructureCache.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Target.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Target.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/TargetMatch.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/TargetMatch.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionAngleM6.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionAngleM6.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/FFConvenience.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/FFConvenience.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/AtomTyper.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/AtomTyper.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/Builder.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/Builder.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/MMFF.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF/MMFF.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/AtomTyper.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/AtomTyper.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/Builder.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/Builder.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/UFF.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF/UFF.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatalogEntry.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatalogEntry.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatalogUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatalogUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatGenerator.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatGenerator.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatParams.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragCatParams.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragFPGenerator.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/FragFPGenerator.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/GraphMol.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MMPA/MMPA.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MMPA/MMPA.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/AlignMolecules.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/AlignMolecules.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/O3AAlignMolecules.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/O3AAlignMolecules.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolBundle.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolBundle.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/MolCatalog.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/MolCatalog.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/MolCatalogEntry.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/MolCatalogEntry.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/MolCatalogParams.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/MolCatalogParams.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/FeatureParser.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/FeatureParser.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeature.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeature.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureFactory.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureFactory.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DCairo.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DCairo.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DDetails.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DDetails.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DQt.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DQt.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DSVG.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DSVG.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2DUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2Dwx.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2Dwx.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MultiMolDraw2D.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MultiMolDraw2D.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/mf.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/mf.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/MolHash.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/MolHash.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/nmmolhash.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/nmmolhash.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/details.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/details.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/MolInterchange.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/MolInterchange.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolOps.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolPickler.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogEntry.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogEntry.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogParams.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogParams.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Charge.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Charge.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Fragment.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Fragment.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogEntry.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogEntry.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogParams.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogParams.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Metal.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Metal.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/MolStandardize.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/MolStandardize.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Normalize.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Normalize.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Tautomer.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Tautomer.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogEntry.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogEntry.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogParams.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogParams.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogEntry.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogEntry.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogParams.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogParams.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Validate.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Validate.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/MolTransforms.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/MolTransforms.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/MonomerInfo.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/MonomerInfo.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/new_canon.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/new_canon.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerCharges.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerCharges.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerParams.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/GasteigerParams.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/PeriodicTable.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/PeriodicTable.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/QueryAtom.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/QueryAtom.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/QueryBond.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/QueryBond.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/RDKitBase.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/RDKitQueries.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/RDKitQueries.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs/ReducedGraphs.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs/ReducedGraphs.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Resonance.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Resonance.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupDecomp.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/RGroupDecomp.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/RingInfo.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/RingInfo.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/Rings.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/Rings.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ROMol.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/RWMol.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/SanitException.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/SanitException.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/ShapeEncoder.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/ShapeEncoder.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/ShapeUtils.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/ShapeUtils.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNAttribs.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNAttribs.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNParse.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNParse.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNParseOps.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/SLNParseOps.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/primes.h...
Parsing file /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/primes.h...
Preprocessing /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmartsWrite.h...
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Preprocessing /build/rdkit-ayqJ8/<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.h:66: warning: documented symbol 'for experimental torsion angle RDKit::DGeomHelpers::preferences' was not declared or defined.
/<<PKGBUILDDIR>>/Code/GraphMol/MolHash/nmmolhash.h:25: warning: documented symbol 'enum RDKIT_MOLHASH_EXPORT RDKit::MolHash::HashFunction' was not declared or defined.
/<<PKGBUILDDIR>>/Code/GraphMol/MolHash/nmmolhash.h:47: warning: documented symbol 'enum RDKIT_MOLHASH_EXPORT RDKit::MolHash::StripType' was not declared or defined.
U/rdkit-201909.1/Code/ForceField/UFF/TorsionConstraint.h...
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Searching for member function documentation...
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Building full member lists recursively...
Adding members to member groups.
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Generating citations page...
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Counting data structures...
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Generating code for file AcidBaseCatalogEntry.h...
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/<<PKGBUILDDIR>>/Code/DataStructs/BitOps.h:184: warning: end of comment block while expecting command </code>
file Snapshot.h...
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 LeaderPicker.h...
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Generating docs for co/<<PKGBUILDDIR>>/Code/DistGeom/DistGeomUtils.h:118: warning: The following parameters of DistGeom::constructForceField(const BoundsMatrix &mmat, RDGeom::PointPtrVect &positions, const VECT_CHIRALSET &csets, double weightChiral=1.0, double weightFourthDim=0.1, std::map< std::pair< int, int >, double > *extraWeights=0, double basinSizeTol=5.0, boost::dynamic_bitset<> *fixedPts=nullptr) are not documented:
  parameter 'fixedPts'
/<<PKGBUILDDIR>>/Code/ForceField/ForceField.h:159: warning: argument 'snapshotFreq' of command @param is not found in the argument list of ForceFields::ForceField::minimize(unsigned int maxIts=200, double forceTol=1e-4, double energyTol=1e-6)
/<<PKGBUILDDIR>>/Code/ForceField/ForceField.h:159: warning: argument 'snapshotVect' of command @param is not found in the argument list of ForceFields::ForceField::minimize(unsigned int maxIts=200, double forceTol=1e-4, double energyTol=1e-6)
/<<PKGBUILDDIR>>/Code/ForceField/ForceField.h:154: warning: The following parameters of ForceFields::ForceField::minimize(unsigned int snapshotFreq, RDKit::SnapshotVect *snapshotVect, unsigned int maxIts=200, double forceTol=1e-4, double energyTol=1e-6) are not documented:
  parameter 'snapshotFreq'
  parameter 'snapshotVect'
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/AngleBend.h:30: warning: argument 'angleType' of command @param is not found in the argument list of ForceFields::MMFF::AngleBendContrib::AngleBendContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, const MMFFAngle *mmffAngleParams, const MMFFProp *mmffPropParamsCentralAtom)
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/AngleBend.h:40: warning: The following parameters of ForceFields::MMFF::AngleBendContrib::AngleBendContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, const MMFFAngle *mmffAngleParams, const MMFFProp *mmffPropParamsCentralAtom) are not documented:
  parameter 'mmffAngleParams'
  parameter 'mmffPropParamsCentralAtom'
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/AngleConstraint.h:27: warning: argument 'minAngle' of command @param is not found in the argument list of ForceFields::MMFF::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst)
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/AngleConstraint.h:27: warning: argument 'maxAngle' of command @param is not found in the argument list of ForceFields::MMFF::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst)
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/AngleConstraint.h:37: warning: The following parameters of ForceFields::MMFF::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst) are not documented:
  parameter 'minAngleDeg'
  parameter 'maxAngleDeg'
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/BondStretch.h:27: warning: argument 'bondType' of command @param is not found in the argument list of ForceFields::MMFF::BondStretchContrib::BondStretchContrib(ForceField *owner, const unsigned int idx1, const unsigned int idx2, const MMFFBond *mmffBondParams)
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/BondStretch.h:27: warning: argument 'end1Params' of command @param is not found in the argument list of ForceFields::MMFF::BondStretchContrib::BondStretchContrib(ForceField *owner, const unsigned int idx1, const unsigned int idx2, const MMFFBond *mmffBondParams)
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/BondStretch.h:27: warning: argument 'end2Params' of command @param is not found in the argument list of ForceFields::MMFF::BondStretchContrib::BondStretchContrib(ForceField *owner, const unsigned int idx1, const unsigned int idx2, const MMFFBond *mmffBondParams)
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/BondStretch.h:36: warning: The following parameters of ForceFields::MMFF::BondStretchContrib::BondStretchContrib(ForceField *owner, const unsigned int idx1, const unsigned int idx2, const MMFFBond *mmffBondParams) are not documented:
  parameter 'mmffBondParams'
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/Nonbonded.h:59: warning: The following parameters of ForceFields::MMFF::EleContrib::EleContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, double chargeTerm, std::uint8_t dielModel, bool is1_4) are not documented:
  parameter 'chargeTerm'
  parameter 'dielModel'
  parameter 'is1_4'
mpound BitVect...
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Generating docs for compound ForceFields::M/<<PKGBUILDDIR>>/Code/ForceField/MMFF/PositionConstraint.h:28: warning: argument 'minDispl' of command @param is not found in the argument list of ForceFields::MMFF::PositionConstraintContrib::PositionConstraintContrib(ForceField *owner, unsigned int idx, double maxDispl, double forceConst)
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/StretchBend.h:31: warning: argument 'angleType' of command @param is not found in the argument list of ForceFields::MMFF::StretchBendContrib::StretchBendContrib(ForceField *owner, const unsigned int idx1, const unsigned int idx2, const unsigned int idx3, const MMFFStbn *mmffStbnParams, const MMFFAngle *mmffAngleParams, const MMFFBond *mmffBondParams1, const MMFFBond *mmffBondParams2)
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/StretchBend.h:41: warning: The following parameters of ForceFields::MMFF::StretchBendContrib::StretchBendContrib(ForceField *owner, const unsigned int idx1, const unsigned int idx2, const unsigned int idx3, const MMFFStbn *mmffStbnParams, const MMFFAngle *mmffAngleParams, const MMFFBond *mmffBondParams1, const MMFFBond *mmffBondParams2) are not documented:
  parameter 'mmffStbnParams'
  parameter 'mmffAngleParams'
  parameter 'mmffBondParams1'
  parameter 'mmffBondParams2'
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/TorsionAngle.h:34: warning: argument 'torsionType' of command @param is not found in the argument list of ForceFields::MMFF::TorsionAngleContrib::TorsionAngleContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, unsigned int idx4, const MMFFTor *mmffTorParams)
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/TorsionAngle.h:46: warning: The following parameters of ForceFields::MMFF::TorsionAngleContrib::TorsionAngleContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, unsigned int idx4, const MMFFTor *mmffTorParams) are not documented:
  parameter 'mmffTorParams'
/<<PKGBUILDDIR>>/Code/ForceField/MMFF/Nonbonded.h:35: warning: The following parameters of ForceFields::MMFF::VdWContrib::VdWContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, const MMFFVdWRijstarEps *mmffVdWConstants) are not documented:
  parameter 'mmffVdWConstants'
/<<PKGBUILDDIR>>/Code/ForceField/UFF/AngleConstraint.h:27: warning: argument 'minAngle' of command @param is not found in the argument list of ForceFields::UFF::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst)
/<<PKGBUILDDIR>>/Code/ForceField/UFF/AngleConstraint.h:27: warning: argument 'maxAngle' of command @param is not found in the argument list of ForceFields::UFF::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst)
/<<PKGBUILDDIR>>/Code/ForceField/UFF/AngleConstraint.h:37: warning: The following parameters of ForceFields::UFF::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst) are not documented:
  parameter 'minAngleDeg'
  parameter 'maxAngleDeg'
/<<PKGBUILDDIR>>/Code/ForceField/UFF/Inversion.h:39: warning: The following parameters of ForceFields::UFF::InversionContrib::InversionContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, unsigned int idx4, int at2AtomicNum, bool isCBoundToO, double oobForceScalingFactor=1.0) are not documented:
  parameter 'oobForceScalingFactor'
/<<PKGBUILDDIR>>/Code/ForceField/UFF/PositionConstraint.h:28: warning: argument 'minDispl' of command @param is not found in the argument list of ForceFields::UFF::PositionConstraintContrib::PositionConstraintContrib(ForceField *owner, unsigned int idx, double maxDispl, double forceConst)
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.h:73: warning: The following parameters of RDDepict::compute2DCoords(RDKit::ROMol &mol, const RDGeom::INT_POINT2D_MAP *coordMap=0, bool canonOrient=false, bool clearConfs=true, unsigned int nFlipsPerSample=0, unsigned int nSamples=0, int sampleSeed=0, bool permuteDeg4Nodes=false, bool forceRDKit=false) are not documented:
  parameter 'forceRDKit'
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.h:128: warning: The following parameters of RDDepict::compute2DCoordsMimicDistMat(RDKit::ROMol &mol, const DOUBLE_SMART_PTR *dmat=0, bool canonOrient=true, bool clearConfs=true, double weightDistMat=0.5, unsigned int nFlipsPerSample=3, unsigned int nSamples=100, int sampleSeed=25, bool permuteDeg4Nodes=true, bool forceRDKit=false) are not documented:
  parameter 'forceRDKit'
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.h:160: warning: The following parameters of RDDepict::generateDepictionMatching2DStructure(RDKit::ROMol &mol, const RDKit::ROMol &reference, int confId=-1, RDKit::ROMol *referencePattern=static_cast< RDKit::ROMol * >(0), bool acceptFailure=false, bool forceRDKit=false) are not documented:
  parameter 'forceRDKit'
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.h:167: warning: argument 'refPattern' of command @param is not found in the argument list of RDDepict::generateDepictionMatching3DStructure(RDKit::ROMol &mol, const RDKit::ROMol &reference, int confId=-1, RDKit::ROMol *referencePattern=0, bool acceptFailure=false, bool forceRDKit=false)
/<<PKGBUILDDIR>>/Code/GraphMol/Depictor/RDDepictor.h:187: warning: The following parameters of RDDepict::generateDepictionMatching3DStructure(RDKit::ROMol &mol, const RDKit::ROMol &reference, int confId=-1, RDKit::ROMol *referencePattern=0, bool acceptFailure=false, bool forceRDKit=false) are not documented:
  parameter 'referencePattern'
  parameter 'forceRDKit'
MFF::MMFFTor...
Generating docs for compound ForceFields::MMFF::MMFFTorCollection...
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Ge/<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:500: warning: Found unknown command '\overloadquery'
/<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:509: warning: Found unknown command '\overloadquery'
/<<PKGBUILDDIR>>/Code/GraphMol/SubstanceGroup.h:197: warning: The following parameters of RDKit::addSubstanceGroup(ROMol &mol, SubstanceGroup sgroup) are not documented:
  parameter 'mol'
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SequenceParsers.h:104: warning: argument 'seq' of command @param is not found in the argument list of RDKit::HELMToMol(const char *helm, bool sanitize=true)
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/SequenceParsers.h:110: warning: The following parameters of RDKit::HELMToMol(const char *helm, bool sanitize=true) are not documented:
  parameter 'helm'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.h:105: warning: The following parameters of RDKit::LayeredFingerprintMol(const ROMol &mol, unsigned int layerFlags=0xFFFFFFFF, unsigned int minPath=1, unsigned int maxPath=7, unsigned int fpSize=2048, std::vector< unsigned int > *atomCounts=0, ExplicitBitVect *setOnlyBits=0, bool branchedPaths=true, const std::vector< std::uint32_t > *fromAtoms=0) are not documented:
  parameter 'fromAtoms'
/<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:500: warning: Found unknown command '\overloadquery'
/<<PKGBUILDDIR>>/Code/GraphMol/QueryOps.h:509: warning: Found unknown command '\overloadquery'
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:60: warning: argument 'line' from the argument list of RDKit::MolDataStreamToMol has multiple @param documentation sections
/<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesWrite.h:126: warning: The following parameters of RDKit::MolToCXSmiles(const ROMol &mol, bool doIsomericSmiles=true, bool doKekule=false, int rootedAtAtom=-1, bool canonical=true, bool allBondsExplicit=false, bool allHsExplicit=false, bool doRandom=false) are not documented:
  parameter 'doRandom'
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:286: warning: argument 'fName' of command @param is not found in the argument list of RDKit::MolToPDBFile(const ROMol &mol, const std::string &fname, int confId=-1, unsigned int flavor=0)
/<<PKGBUILDDIR>>/Code/GraphMol/FileParsers/FileParsers.h:298: warning: The following parameters of RDKit::MolToPDBFile(const ROMol &mol, const std::string &fname, int confId=-1, unsigned int flavor=0) are not documented:
  parameter 'fname'
/<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse/SmilesWrite.h:75: warning: The following parameters of RDKit::MolToSmiles(const ROMol &mol, bool doIsomericSmiles=true, bool doKekule=false, int rootedAtAtom=-1, bool canonical=true, bool allBondsExplicit=false, bool allHsExplicit=false, bool doRandom=false) are not documented:
  parameter 'doRandom'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.h:24: warning: argument 'useBondOrders' of command @param is not found in the argument list of RDKit::RDKFingerprintMol(const ROMol &mol, unsigned int minPath=1, unsigned int maxPath=7, unsigned int fpSize=2048, unsigned int nBitsPerHash=2, bool useHs=true, double tgtDensity=0.0, unsigned int minSize=128, bool branchedPaths=true, bool useBondOrder=true, std::vector< std::uint32_t > *atomInvariants=0, const std::vector< std::uint32_t > *fromAtoms=0, std::vector< std::vector< std::uint32_t >> *atomBits=0, std::map< std::uint32_t, std::vector< std::vector< int >>> *bitInfo=0)
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Fingerprints.h:53: warning: The following parameters of RDKit::RDKFingerprintMol(const ROMol &mol, unsigned int minPath=1, unsigned int maxPath=7, unsigned int fpSize=2048, unsigned int nBitsPerHash=2, bool useHs=true, double tgtDensity=0.0, unsigned int minSize=128, bool branchedPaths=true, bool useBondOrder=true, std::vector< std::uint32_t > *atomInvariants=0, const std::vector< std::uint32_t > *fromAtoms=0, std::vector< std::vector< std::uint32_t >> *atomBits=0, std::map< std::uint32_t, std::vector< std::vector< int >>> *bitInfo=0) are not documented:
  parameter 'useBondOrder'
  parameter 'bitInfo'
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionRunner.h:97: warning: The following parameters of RDKit::reduceProductToSideChains(const ROMOL_SPTR &product, bool addDummyAtoms=true) are not documented:
  parameter 'product'
/<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms/ChemTransforms.h:113: warning: argument 'useChirality' of command @param is not found in the argument list of RDKit::replaceCore(const ROMol &mol, const ROMol &core, const MatchVectType &matchVect, bool replaceDummies=true, bool labelByIndex=false, bool requireDummyMatch=false)
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionRunner.h:63: warning: argument 'reactantTemplateIdx' of command @param is not found in the argument list of RDKit::run_Reactant(const ChemicalReaction &rxn, const ROMOL_SPTR &reactant, unsigned int reactantIdx)
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/ReactionRunner.h:77: warning: The following parameters of RDKit::run_Reactant(const ChemicalReaction &rxn, const ROMOL_SPTR &reactant, unsigned int reactantIdx) are not documented:
  parameter 'rxn'
  parameter 'reactantIdx'
/<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.h:55: warning: argument 'matchParams' of command @param is not found in the argument list of RDKit::SubstructMatch(const ROMol &mol, const ROMol &query, const SubstructMatchParameters &params=SubstructMatchParameters())
/<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.h:63: warning: The following parameters of RDKit::SubstructMatch(const ROMol &mol, const ROMol &query, const SubstructMatchParameters &params=SubstructMatchParameters()) are not documented:
  parameter 'params'
/<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.h:68: warning: argument 'matchParams' of command @param is not found in the argument list of RDKit::SubstructMatch(ResonanceMolSupplier &resMolSuppl, const ROMol &query, const SubstructMatchParameters &params=SubstructMatchParameters())
/<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.h:76: warning: The following parameters of RDKit::SubstructMatch(ResonanceMolSupplier &resMolSuppl, const ROMol &query, const SubstructMatchParameters &params=SubstructMatchParameters()) are not documented:
  parameter 'params'
/<<PKGBUILDDIR>>/Code/GraphMol/Substruct/SubstructMatch.h:145: warning: The following parameters of RDKit::SubstructMatch(T1 &mol, const T2 &query, std::vector< MatchVectType > &matchVect, bool uniquify=true, bool recursionPossible=true, bool useChirality=false, bool useQueryQueryMatches=false, unsigned int maxMatches=1000, int numThreads=1) are not documented:
  parameter 'numThreads'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintGenerator.h:109: warning: The following parameters of RDKit::AtomEnvironment::getBitId(FingerprintArguments< OutputType > *arguments, const std::vector< std::uint32_t > *atomInvariants, const std::vector< std::uint32_t > *bondInvariants, const AdditionalOutput *AdditionalOutput, const bool hashResults=false) const=0 are not documented:
  parameter 'AdditionalOutput'
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h:206: warning: argument 'maxProducts' of command @param is not found in the argument list of RDKit::ChemicalReaction::runReactants(const MOL_SPTR_VECT reactants, unsigned int numProducts=1000) const
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Reaction.h:222: warning: The following parameters of RDKit::ChemicalReaction::runReactants(const MOL_SPTR_VECT reactants, unsigned int numProducts=1000) const are not documented:
  parameter 'numProducts'
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h:415: warning: argument 'matches' of command @param is not found in the argument list of RDKit::ExclusionList::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const inherited from member getMatches at line 98 in file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h:415: warning: The following parameters of RDKit::ExclusionList::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const are not documented:
  parameter 'matchVect'
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h:98: warning: argument 'matches' of command @param is not found in the argument list of RDKit::FilterMatcherBase::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const=0
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h:105: warning: The following parameters of RDKit::FilterMatcherBase::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const=0 are not documented:
  parameter 'matchVect'
nerating docs for compound RDGeom::PointND...
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Generating docs for compound RDKit::DataStructsExplicitBitVecPropHandler...
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Generating docs for compound RDKi/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:222: warning: argument 'highlight_atoms' from the argument list of RDKit::MolDraw2D::drawMolecule has multiple @param documentation sections
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:222: warning: The following parameters of RDKit::MolDraw2D::drawMolecule(const ROMol &mol, const std::string &legend, const std::vector< int > *highlight_atoms, const std::vector< int > *highlight_bonds, const std::map< int, DrawColour > *highlight_atom_map=nullptr, const std::map< int, DrawColour > *highlight_bond_map=nullptr, const std::map< int, double > *highlight_radii=nullptr, int confId=-1) are not documented:
  parameter 'highlight_bonds'
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:252: warning: argument 'highlight_atom_map' of command @param is not found in the argument list of RDKit::MolDraw2D::drawMolecules(const std::vector< ROMol * > &mols, const std::vector< std::string > *legends=nullptr, const std::vector< std::vector< int >> *highlight_atoms=nullptr, const std::vector< std::vector< int >> *highlight_bonds=nullptr, const std::vector< std::map< int, DrawColour >> *highlight_atom_maps=nullptr, const std::vector< std::map< int, DrawColour >> *highlight_bond_maps=nullptr, const std::vector< std::map< int, double >> *highlight_radii=nullptr, const std::vector< int > *confIds=nullptr)
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:252: warning: argument 'highlight_bond_map' of command @param is not found in the argument list of RDKit::MolDraw2D::drawMolecules(const std::vector< ROMol * > &mols, const std::vector< std::string > *legends=nullptr, const std::vector< std::vector< int >> *highlight_atoms=nullptr, const std::vector< std::vector< int >> *highlight_bonds=nullptr, const std::vector< std::map< int, DrawColour >> *highlight_atom_maps=nullptr, const std::vector< std::map< int, DrawColour >> *highlight_bond_maps=nullptr, const std::vector< std::map< int, double >> *highlight_radii=nullptr, const std::vector< int > *confIds=nullptr)
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:252: warning: argument 'confId' of command @param is not found in the argument list of RDKit::MolDraw2D::drawMolecules(const std::vector< ROMol * > &mols, const std::vector< std::string > *legends=nullptr, const std::vector< std::vector< int >> *highlight_atoms=nullptr, const std::vector< std::vector< int >> *highlight_bonds=nullptr, const std::vector< std::map< int, DrawColour >> *highlight_atom_maps=nullptr, const std::vector< std::map< int, DrawColour >> *highlight_bond_maps=nullptr, const std::vector< std::map< int, double >> *highlight_radii=nullptr, const std::vector< int > *confIds=nullptr)
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:277: warning: argument 'highlight_atoms' from the argument list of RDKit::MolDraw2D::drawMolecules has multiple @param documentation sections
/<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/MolDraw2D.h:277: warning: The following parameters of RDKit::MolDraw2D::drawMolecules(const std::vector< ROMol * > &mols, const std::vector< std::string > *legends=nullptr, const std::vector< std::vector< int >> *highlight_atoms=nullptr, const std::vector< std::vector< int >> *highlight_bonds=nullptr, const std::vector< std::map< int, DrawColour >> *highlight_atom_maps=nullptr, const std::vector< std::map< int, DrawColour >> *highlight_bond_maps=nullptr, const std::vector< std::map< int, double >> *highlight_radii=nullptr, const std::vector< int > *confIds=nullptr) are not documented:
  parameter 'highlight_bonds'
  parameter 'highlight_atom_maps'
  parameter 'highlight_bond_maps'
  parameter 'confIds'
/<<PKGBUILDDIR>>/Code/GraphMol/Resonance.h:55: warning: argument 'numThreads' of command @param is not found in the argument list of RDKit::ResonanceMolSupplier::ResonanceMolSupplier(ROMol &mol, unsigned int flags=0, unsigned int maxStructs=1000)
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h:322: warning: argument 'matches' of command @param is not found in the argument list of RDKit::SmartsMatcher::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const inherited from member getMatches at line 98 in file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h:322: warning: The following parameters of RDKit::SmartsMatcher::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const are not documented:
  parameter 'matchVect'
t::FragCatGenerator...
Generating docs for compound RDKit::FragCatParams...
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G/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairGenerator.h:103: warning: The following parameters of RDKit::AtomPair::AtomPairAtomEnv::getBitId(FingerprintArguments< OutputType > *arguments, const std::vector< std::uint32_t > *atomInvariants, const std::vector< std::uint32_t > *bondInvariants, const AdditionalOutput *AdditionalOutput, const bool hashResults=false) const are not documented:
  parameter 'AdditionalOutput'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/AtomPairs.h:121: warning: The following parameters of RDKit::AtomPairs::getHashedAtomPairFingerprint(const ROMol &mol, unsigned int nBits=2048, unsigned int minLength=1, unsigned int maxLength=maxPathLen - 1, const std::vector< std::uint32_t > *fromAtoms=0, const std::vector< std::uint32_t > *ignoreAtoms=0, const std::vector< std::uint32_t > *atomInvariants=0, bool includeChirality=false, bool use2D=true, int confId=-1) are not documented:
  parameter 'confId'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/FingerprintUtil.h:77: warning: The following parameters of RDKit::AtomPairs::getTopologicalTorsionCode(const std::vector< std::uint32_t > &atomCodes, bool includeChirality=false) are not documented:
  parameter 'includeChirality'
/<<PKGBUILDDIR>>/Code/GraphMol/Canon.h:114: warning: The following parameters of RDKit::Canon::canonicalizeFragment(ROMol &mol, int atomIdx, std::vector< AtomColors > &colors, const std::vector< unsigned int > &ranks, MolStack &molStack, const boost::dynamic_bitset<> *bondsInPlay=0, const std::vector< std::string > *bondSymbols=0, bool doIsomericSmiles=false, bool doRandom=false) are not documented:
  parameter 'bondsInPlay'
  parameter 'bondSymbols'
  parameter 'doIsomericSmiles'
  parameter 'doRandom'
/<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Lipinski.h:44: warning: argument 'strict' of command @param is not found in the argument list of RDKit::Descriptors::calcNumRotatableBonds(const ROMol &mol, NumRotatableBondsOptions useStrictDefinition=Default)
/<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Lipinski.h:52: warning: The following parameters of RDKit::Descriptors::calcNumRotatableBonds(const ROMol &mol, NumRotatableBondsOptions useStrictDefinition=Default) are not documented:
  parameter 'useStrictDefinition'
/<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/USRDescriptor.h:81: warning: The following parameters of RDKit::Descriptors::USRCAT(const ROMol &mol, std::vector< double > &descriptor, std::vector< std::vector< unsigned int >> &atomIds, int confId=-1) are not documented:
  parameter 'atomIds'
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h:86: warning: argument 'matches' of command @param is not found in the argument list of RDKit::FilterMatchOps::And::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const inherited from member getMatches at line 98 in file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h:86: warning: The following parameters of RDKit::FilterMatchOps::And::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const are not documented:
  parameter 'matchVect'
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h:204: warning: argument 'matches' of command @param is not found in the argument list of RDKit::FilterMatchOps::Not::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const inherited from member getMatches at line 98 in file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h:204: warning: The following parameters of RDKit::FilterMatchOps::Not::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const are not documented:
  parameter 'matchVect'
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h:148: warning: argument 'matches' of command @param is not found in the argument list of RDKit::FilterMatchOps::Or::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const inherited from member getMatches at line 98 in file /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatcherBase.h
/<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/FilterMatchers.h:148: warning: The following parameters of RDKit::FilterMatchOps::Or::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const are not documented:
  parameter 'matchVect'
enerating docs for compound RDKit::SubstanceGroup...
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Generating docs for compound RDKit::MMFF::MMFFAtomProperties...
Generating docs for compound RDKit::MMFF::MMFFMolProperties/<<PKGBUILDDIR>>/Code/GraphMol/MMPA/MMPA.h:36: warning: The following parameters of RDKit::MMPA::fragmentMol(const ROMol &mol, std::vector< std::pair< ROMOL_SPTR, ROMOL_SPTR >> &result, unsigned int maxCuts=3, unsigned int maxCutBonds=20, const std::string &pattern="[#6+0;!$(*=,#[!#6])]!@!=!#[*]") are not documented:
  parameter 'pattern'
/<<PKGBUILDDIR>>/Code/GraphMol/MMPA/MMPA.h:57: warning: The following parameters of RDKit::MMPA::fragmentMol(const ROMol &mol, std::vector< std::pair< ROMOL_SPTR, ROMOL_SPTR >> &result, unsigned int minCuts, unsigned int maxCuts, unsigned int maxCutBonds, const std::string &pattern="[#6+0;!$(*=,#[!#6])]!@!=!#[*]") are not documented:
  parameter 'pattern'
/<<PKGBUILDDIR>>/Code/GraphMol/MolOps.h:673: warning: The following parameters of RDKit::MolOps::getAdjacencyMatrix(const ROMol &mol, bool useBO=false, int emptyVal=0, bool force=false, const char *propNamePrefix=0, const boost::dynamic_bitset<> *bondsToUse=0) are not documented:
  parameter 'bondsToUse'
/<<PKGBUILDDIR>>/Code/GraphMol/MolOps.h:260: warning: The following parameters of RDKit::MolOps::mergeQueryHs(const ROMol &mol, bool mergeUnmappedOnly=false) are not documented:
  parameter 'mergeUnmappedOnly'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.h:188: warning: argument 'OutputType' of command @param is not found in the argument list of RDKit::MorganFingerprint::getMorganGenerator(const unsigned int radius, const bool countSimulation=false, const bool includeChirality=false, const bool useBondTypes=true, const bool onlyNonzeroInvariants=false, AtomInvariantsGenerator *atomInvariantsGenerator=nullptr, BondInvariantsGenerator *bondInvariantsGenerator=nullptr, const std::uint32_t fpSize=2048, const std::vector< std::uint32_t > countBounds={1, 2, 4, 8}, const bool ownsAtomInvGen=false, const bool ownsBondInvGen=false)
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.h:188: warning: argument 'radiu' of command @param is not found in the argument list of RDKit::MorganFingerprint::getMorganGenerator(const unsigned int radius, const bool countSimulation=false, const bool includeChirality=false, const bool useBondTypes=true, const bool onlyNonzeroInvariants=false, AtomInvariantsGenerator *atomInvariantsGenerator=nullptr, BondInvariantsGenerator *bondInvariantsGenerator=nullptr, const std::uint32_t fpSize=2048, const std::vector< std::uint32_t > countBounds={1, 2, 4, 8}, const bool ownsAtomInvGen=false, const bool ownsBondInvGen=false)
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.h:228: warning: argument 'countSimulation' from the argument list of RDKit::MorganFingerprint::getMorganGenerator has multiple @param documentation sections
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.h:228: warning: argument 'includeChirality' from the argument list of RDKit::MorganFingerprint::getMorganGenerator has multiple @param documentation sections
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.h:228: warning: argument 'onlyNonzeroInvariants' from the argument list of RDKit::MorganFingerprint::getMorganGenerator has multiple @param documentation sections
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.h:228: warning: The following parameters of RDKit::MorganFingerprint::getMorganGenerator(const unsigned int radius, const bool countSimulation=false, const bool includeChirality=false, const bool useBondTypes=true, const bool onlyNonzeroInvariants=false, AtomInvariantsGenerator *atomInvariantsGenerator=nullptr, BondInvariantsGenerator *bondInvariantsGenerator=nullptr, const std::uint32_t fpSize=2048, const std::vector< std::uint32_t > countBounds={1, 2, 4, 8}, const bool ownsAtomInvGen=false, const bool ownsBondInvGen=false) are not documented:
  parameter 'radius'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganGenerator.h:151: warning: The following parameters of RDKit::MorganFingerprint::MorganAtomEnv::getBitId(FingerprintArguments< OutputType > *arguments, const std::vector< std::uint32_t > *atomInvariants, const std::vector< std::uint32_t > *bondInvariants, const AdditionalOutput *AdditionalOutput, const bool hashResults=false) const are not documented:
  parameter 'AdditionalOutput'
...
Generating docs for namespace RDKit::MMFF::DefaultParameters
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Generating docs for namespace RDKit::MMPA
Generating docs for namespace RDKit::MolAlign
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Generating docs for compound RDKit::MolInterchange::JSONParseParameters...
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Generating docs for compound RDKit::MolOps::AdjustQueryParameters...
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Generating docs for compound RDKit::MolStandardize::AcidBaseCatalogEntry...
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Generating docs for namespace RDKit::MorganFingerprint
Generating docs for compound RDKit::MorganFingerprint::MorganArguments...
Generating docs for compound RDKit::MorganFingerprint::MorganAtomEnv...
Generatin/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/MorganFingerprints.h:152: warning: The following parameters of RDKit::MorganFingerprints::getHashedFingerprint(const ROMol &mol, unsigned int radius, unsigned int nBits=2048, std::vector< std::uint32_t > *invariants=0, const std::vector< std::uint32_t > *fromAtoms=0, bool useChirality=false, bool useBondTypes=true, bool onlyNonzeroInvariants=false, BitInfoMap *atomsSettingBits=0) are not documented:
  parameter 'nBits'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/RDKitFPGenerator.h:76: warning: The following parameters of RDKit::RDKitFP::RDKitFPAtomEnv::getBitId(FingerprintArguments< OutputType > *arguments, const std::vector< std::uint32_t > *atomInvariants, const std::vector< std::uint32_t > *bondInvariants, const AdditionalOutput *AdditionalOutput, bool hashResults=false) const are not documented:
  parameter 'AdditionalOutput'
/<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs/ReducedGraphs.h:34: warning: The following parameters of RDKit::ReducedGraphs::generateMolExtendedReducedGraph(const ROMol &mol, std::vector< boost::dynamic_bitset<>> *atomTypes=0) are not documented:
  parameter 'atomTypes'
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/SanitizeRxn.h:125: warning: argument 'operationThatFailed' of command @param is not found in the argument list of RDKit::RxnOps::sanitizeRxn(ChemicalReaction &rxn, unsigned int &operationsThatFailed, unsigned int sanitizeOps=SANITIZE_ALL, const MolOps::AdjustQueryParameters &params=DefaultRxnAdjustParams())
/<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/SanitizeRxn.h:156: warning: The following parameters of RDKit::RxnOps::sanitizeRxn(ChemicalReaction &rxn, unsigned int &operationsThatFailed, unsigned int sanitizeOps=SANITIZE_ALL, const MolOps::AdjustQueryParameters &params=DefaultRxnAdjustParams()) are not documented:
  parameter 'operationsThatFailed'
  parameter 'params'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:86: warning: argument 'useCountSimulation' of command @param is not found in the argument list of RDKit::TopologicalTorsion::getTopologicalTorsionGenerator(const bool includeChirality=false, const uint32_t torsionAtomCount=4, AtomInvariantsGenerator *atomInvariantsGenerator=nullptr, const bool countSimulation=true, const std::vector< std::uint32_t > countBounds={1, 2, 4, 8}, const std::uint32_t fpSize=2048, const bool ownsAtomInvGen=false)
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:109: warning: The following parameters of RDKit::TopologicalTorsion::getTopologicalTorsionGenerator(const bool includeChirality=false, const uint32_t torsionAtomCount=4, AtomInvariantsGenerator *atomInvariantsGenerator=nullptr, const bool countSimulation=true, const std::vector< std::uint32_t > countBounds={1, 2, 4, 8}, const std::uint32_t fpSize=2048, const bool ownsAtomInvGen=false) are not documented:
  parameter 'countSimulation'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:32: warning: argument 'useCountSimulation' of command @param is not found in the argument list of RDKit::TopologicalTorsion::TopologicalTorsionArguments< OutputType >::TopologicalTorsionArguments(const bool includeChirality, const uint32_t torsionAtomCount, const bool countSimulation, const std::vector< std::uint32_t > countBounds, const std::uint32_t fpSize)
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:44: warning: The following parameters of RDKit::TopologicalTorsion::TopologicalTorsionArguments::TopologicalTorsionArguments(const bool includeChirality, const uint32_t torsionAtomCount, const bool countSimulation, const std::vector< std::uint32_t > countBounds, const std::uint32_t fpSize) are not documented:
  parameter 'countSimulation'
/<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:57: warning: The following parameters of RDKit::TopologicalTorsion::TopologicalTorsionAtomEnv::getBitId(FingerprintArguments< OutputType > *arguments, const std::vector< std::uint32_t > *atomInvariants, const std::vector< std::uint32_t > *bondInvariants, const AdditionalOutput *AdditionalOutput, const bool hashResults=false) const are not documented:
  parameter 'AdditionalOutput'
/<<PKGBUILDDIR>>/Code/SimDivPickers/HierarchicalClusterPicker.h:80: warning: The following parameters of RDPickers::HierarchicalClusterPicker::pick(const double *distMat, unsigned int poolSize, unsigned int pickSize) const are not documented:
  parameter 'distMat'
/<<PKGBUILDDIR>>/Code/SimDivPickers/LeaderPicker.h:46: warning: argument 'firstPicks' of command @param is not found in the argument list of RDPickers::LeaderPicker::lazyPick(T &func, unsigned int poolSize, unsigned int pickSize) const
/<<PKGBUILDDIR>>/Code/SimDivPickers/LeaderPicker.h:46: warning: argument 'seed' of command @param is not found in the argument list of RDPickers::LeaderPicker::lazyPick(T &func, unsigned int poolSize, unsigned int pickSize) const
/<<PKGBUILDDIR>>/Code/SimDivPickers/LeaderPicker.h:98: warning: The following parameters of RDPickers::LeaderPicker::pick(const double *distMat, unsigned int poolSize, unsigned int pickSize, const RDKit::INT_VECT &firstPicks, double threshold, int nthreads) const are not documented:
  parameter 'threshold'
  parameter 'nthreads'
/<<PKGBUILDDIR>>/Code/SimDivPickers/MaxMinPicker.h:42: warning: argument 'firstPicks' of command @param is not found in the argument list of RDPickers::MaxMinPicker::lazyPick(T &func, unsigned int poolSize, unsigned int pickSize) const
/<<PKGBUILDDIR>>/Code/SimDivPickers/MaxMinPicker.h:42: warning: argument 'seed' of command @param is not found in the argument list of RDPickers::MaxMinPicker::lazyPick(T &func, unsigned int poolSize, unsigned int pickSize) const
g docs for compound RDKit::MorganFingerprint::MorganAtomInvGenerator...
Generating docs for compound RDKit::MorganFingerprint::MorganBondInvGenerator...
Generating docs for compound RDKit::MorganFingerprint::MorganEnvGenerator...
Generating docs for compound RDKit::MorganFingerprint::MorganFeatureAtomInvGenerator...
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Running plantuml with JAVA...
lookup cache used 16858/65536 hits=136806 misses=18285
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(cd /<<PKGBUILDDIR>>/Docs/Book; RDBASE=/<<PKGBUILDDIR>> /usr/bin/make html)
make[2]: Entering directory '/<<PKGBUILDDIR>>/Docs/Book'
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/usr/lib/python3/dist-packages/recommonmark/parser.py:280: UserWarning: Unsupported inline type Hardbreak
  warn("Unsupported inline type " + inline.t)
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInPython.rst:2817: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/RDKit_Book.rst:208: WARNING: Title underline too short.

Ring closures
------------
/<<PKGBUILDDIR>>/Docs/Book/RDKit_Book.rst:208: WARNING: Title underline too short.

Ring closures
------------
WARNING: autodoc: failed to import module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Avalon' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Avalon.pyAvalonTools' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AllChem' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs.Pairs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs.Sheridan' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs.Torsions' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs.Utils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.BRICS' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.BuildFragmentCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils.AlignDepict' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils.BulkTester' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils.DescriptorUtilities' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils.SDFToCSV' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils.TemplateExpand' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemicalFeatures' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemicalForceFields' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Crippen' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.DSViewer' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Descriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Descriptors3D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.IPythonConsole' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.MolDrawing' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.SimilarityMaps' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.aggCanvas' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.cairoCanvas' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.canvasbase' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.mplCanvas' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.qtCanvas' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.rdMolDraw2D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState.AtomTypes' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState.EState' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState.EState_VSA' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState.Fingerprinter' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EnumerateHeterocycles' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EnumerateStereoisomers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FastSDMolSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatFinderCLI' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps.FeatMapParser' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps.FeatMapPoint' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps.FeatMapUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps.FeatMaps' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Features' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Features.FeatDirUtilsRD' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Features.ShowFeats' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FilterCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.ClusterMols' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.DbFpSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.FingerprintMols' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.MolSimilarity' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.SimilarityScreener' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fraggle' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fraggle.FraggleSim' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FragmentCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FragmentMatcher' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fragments' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FunctionalGroups' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.GraphDescriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Graphs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Lipinski' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MACCSkeys' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MCS' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb.FingerprintUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb.Loader' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb.Loader_orig' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb.Loader_sa' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolKey' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolKey.InchiInfo' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolKey.MolKey' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolStandardize.rdMolStandardize' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolSurf' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.PandasTools' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.PeriodicTable' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.Generate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.Gobbi_Pharm2D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.LazyGenerator' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.Matcher' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.SigFactory' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.Utils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm3D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm3D.EmbedLib' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm3D.ExcludedVolume' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm3D.Pharmacophore' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.PropertyMol' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.PyMol' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.QED' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Randomize' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Recap' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ReducedGraphs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.SATIS' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.SaltRemover' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Scaffolds' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Scaffolds.MurckoScaffold' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Scaffolds.ScaffoldTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ShowMols' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.SimpleEnum' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.SimpleEnum.Enumerator' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape.BuilderUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape.SubshapeAligner' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape.SubshapeBuilder' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape.SubshapeObjects' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape.testCombined' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Suppliers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Suppliers.DbMolSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Suppliers.MolSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.TemplateAlign' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.TorsionFingerprints' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.fmcs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.fmcs.fmcs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.inchi' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdChemReactions' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdChemicalFeatures.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdChemicalFeatures module
=================================
WARNING: autodoc: failed to import module 'Chem.rdChemicalFeatures' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdCoordGen' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdDepictor' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdDistGeom' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdFMCS' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdFingerprintGenerator' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdForceFieldHelpers.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdForceFieldHelpers module
=================================
WARNING: autodoc: failed to import module 'Chem.rdForceFieldHelpers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdFreeSASA' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMMPA' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMolAlign' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMolCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdMolChemicalFeatures.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdMolChemicalFeatures module
=================================
WARNING: autodoc: failed to import module 'Chem.rdMolChemicalFeatures' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdMolDescriptors.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdMolDescriptors module
=================================
WARNING: autodoc: failed to import module 'Chem.rdMolDescriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMolHash' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdMolInterchange.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdMolInterchange module
=================================
WARNING: autodoc: failed to import module 'Chem.rdMolInterchange' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMolTransforms' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdPartialCharges.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdPartialCharges module
=================================
WARNING: autodoc: failed to import module 'Chem.rdPartialCharges' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdRGroupDecomposition.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdRGroupDecomposition module
=================================
WARNING: autodoc: failed to import module 'Chem.rdRGroupDecomposition' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdReducedGraphs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdSLNParse' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdShapeHelpers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdStructChecker' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdSubstructLibrary.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdSubstructLibrary module
=================================
WARNING: autodoc: failed to import module 'Chem.rdSubstructLibrary' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdchem' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdfiltercatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdfragcatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdinchi' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdmolfiles' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdmolops' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdqueries' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdtrajectory' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataManip' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataManip.Metric' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataManip.Metric.rdMetricMatrixCalc' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.BitEnsemble' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.BitEnsembleDb' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.BitUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.HierarchyVis' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.LazySignature' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.TopNContainer' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.VectCollection' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.cDataStructs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbConnection' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbInfo' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbModule' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbReport' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbResultSet' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.StorageUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DistanceGeometry' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DistanceGeometry.DistGeom' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ForceField.rst:5: WARNING: Block quote ends without a blank line; unexpected unindent.
WARNING: autodoc: failed to import module 'ForceField' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ForceField.rdForceField' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Geometry' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Geometry.rdGeometry' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.AnalyzeComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.BuildComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Butina' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.ClusterUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.ClusterVis' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Clustering' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Clusters' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Murtagh' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Resemblance' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Standardize' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Composite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Composite.AdjustComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Composite.BayesComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Composite.Composite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.CompositeRun' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.DataUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.FindQuantBounds' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.MLData' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.Quantize' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.SplitData' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.Stats' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.Transforms' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.BuildQuantTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.BuildSigTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.CrossValidate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.DecTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.Forest' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.ID3' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.PruneTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.QuantTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.SigTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.Tree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.TreeUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.TreeVis' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.randomtest' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors.CompoundDescriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors.Descriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors.MoleculeDescriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors.Parser' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.EnrichPlot' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.GrowComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.InfoTheory' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.InfoTheory.BitClusterer' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.InfoTheory.BitRank' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.InfoTheory.entropy' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.InfoTheory.rdInfoTheory.rst:2: WARNING: Title underline too short.

rdkit.ML.InfoTheory.rdInfoTheory module
======================================
WARNING: autodoc: failed to import module 'ML.InfoTheory.rdInfoTheory' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.CrossValidate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.DistFunctions' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.KNNClassificationModel' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.KNNModel' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.KNNRegressionModel' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.MLUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.MLUtils.VoteImg' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.MatOps' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.ModelPackage' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.ModelPackage.PackageUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.ModelPackage.Packager' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.NaiveBayes' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.NaiveBayes.ClassificationModel' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.NaiveBayes.CrossValidate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.ActFuncs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.CrossValidate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.NetNode' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.Network' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.Trainers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.SLT' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.SLT.Risk' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Scoring' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Scoring.Scoring' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.ScreenComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.files' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Numerics' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Numerics.rdAlignment' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'RDConfig' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'RDLogger' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'RDPaths' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'RDRandom' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'SimDivFilters' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'SimDivFilters.SimilarityPickers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'SimDivFilters.rdSimDivPickers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'TestRunner' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.Filter' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.Node' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.DbMolSupply' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.DbPickleSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.SDSupply' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.SmartsMolFilter' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.SmartsRemover' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.SmilesDupeFilter' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.SmilesOutput' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.SmilesSupply' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.NodeLib.demo' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.Output' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.Supply' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib.Transform' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdBase' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'six' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.cactvs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.chemdraw' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.chemdraw_qax' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.chemutils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.comhack' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.fileutils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.listutils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'utils.spiral' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
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/usr/lib/python3/dist-packages/recommonmark/parser.py:280: UserWarning: Unsupported inline type Hardbreak
  warn("Unsupported inline type " + inline.t)
/<<PKGBUILDDIR>>/Docs/Book/GettingStartedInPython.rst:2817: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<PKGBUILDDIR>>/Docs/Book/RDKit_Book.rst:208: WARNING: Title underline too short.

Ring closures
------------
/<<PKGBUILDDIR>>/Docs/Book/RDKit_Book.rst:208: WARNING: Title underline too short.

Ring closures
------------
WARNING: autodoc: failed to import module 'rdkit'; the following exception was raised:
No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AllChem' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs.Pairs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs.Sheridan' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs.Torsions' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.AtomPairs.Utils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.BRICS' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.BuildFragmentCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils.DescriptorUtilities' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils.SDFToCSV' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemUtils.TemplateExpand' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemicalFeatures' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ChemicalForceFields' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Crippen' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.DSViewer' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Descriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
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No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.IPythonConsole' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.MolDrawing' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.SimilarityMaps' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.aggCanvas' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.cairoCanvas' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.canvasbase' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.mplCanvas' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.qtCanvas' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Draw.rdMolDraw2D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState.AtomTypes' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState.EState' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState.EState_VSA' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EState.Fingerprinter' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EnumerateHeterocycles' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.EnumerateStereoisomers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FastSDMolSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatFinderCLI' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps.FeatMapParser' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps.FeatMapPoint' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps.FeatMapUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FeatMaps.FeatMaps' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Features' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Features.FeatDirUtilsRD' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Features.ShowFeats' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FilterCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.ClusterMols' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.DbFpSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.FingerprintMols' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.MolSimilarity' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fingerprints.SimilarityScreener' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fraggle' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fraggle.FraggleSim' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FragmentCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FragmentMatcher' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Fragments' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.FunctionalGroups' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.GraphDescriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Graphs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Lipinski' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MACCSkeys' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MCS' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb.FingerprintUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb.Loader' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb.Loader_orig' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolDb.Loader_sa' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolKey' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolKey.InchiInfo' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolKey.MolKey' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolStandardize.rdMolStandardize' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.MolSurf' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.PandasTools' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.PeriodicTable' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.Generate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.Gobbi_Pharm2D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.LazyGenerator' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.Matcher' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.SigFactory' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm2D.Utils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm3D' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm3D.EmbedLib' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm3D.ExcludedVolume' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Pharm3D.Pharmacophore' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.PropertyMol' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.PyMol' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.QED' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Randomize' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Recap' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ReducedGraphs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.SATIS' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.SaltRemover' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Scaffolds' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Scaffolds.MurckoScaffold' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Scaffolds.ScaffoldTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.ShowMols' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.SimpleEnum' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.SimpleEnum.Enumerator' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape.BuilderUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape.SubshapeAligner' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape.SubshapeBuilder' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape.SubshapeObjects' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Subshape.testCombined' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Suppliers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Suppliers.DbMolSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.Suppliers.MolSupplier' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.TemplateAlign' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.TorsionFingerprints' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.fmcs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.fmcs.fmcs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.inchi' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdChemReactions' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdChemicalFeatures.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdChemicalFeatures module
=================================
WARNING: autodoc: failed to import module 'Chem.rdChemicalFeatures' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdCoordGen' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdDepictor' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdDistGeom' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdFMCS' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdFingerprintGenerator' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdForceFieldHelpers.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdForceFieldHelpers module
=================================
WARNING: autodoc: failed to import module 'Chem.rdForceFieldHelpers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdFreeSASA' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMMPA' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMolAlign' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMolCatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdMolChemicalFeatures.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdMolChemicalFeatures module
=================================
WARNING: autodoc: failed to import module 'Chem.rdMolChemicalFeatures' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdMolDescriptors.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdMolDescriptors module
=================================
WARNING: autodoc: failed to import module 'Chem.rdMolDescriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMolHash' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdMolInterchange.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdMolInterchange module
=================================
WARNING: autodoc: failed to import module 'Chem.rdMolInterchange' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdMolTransforms' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdPartialCharges.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdPartialCharges module
=================================
WARNING: autodoc: failed to import module 'Chem.rdPartialCharges' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdRGroupDecomposition.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdRGroupDecomposition module
=================================
WARNING: autodoc: failed to import module 'Chem.rdRGroupDecomposition' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdReducedGraphs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdSLNParse' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdShapeHelpers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdStructChecker' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.Chem.rdSubstructLibrary.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdSubstructLibrary module
=================================
WARNING: autodoc: failed to import module 'Chem.rdSubstructLibrary' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdchem' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdfiltercatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdfragcatalog' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdinchi' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdmolfiles' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdmolops' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdqueries' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Chem.rdtrajectory' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataManip' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataManip.Metric' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataManip.Metric.rdMetricMatrixCalc' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.BitEnsemble' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.BitEnsembleDb' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.BitUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.HierarchyVis' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.LazySignature' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.TopNContainer' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.VectCollection' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DataStructs.cDataStructs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbConnection' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbInfo' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbModule' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbReport' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbResultSet' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.DbUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Dbase.StorageUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DistanceGeometry' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'DistanceGeometry.DistGeom' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ForceField.rst:5: WARNING: Block quote ends without a blank line; unexpected unindent.
WARNING: autodoc: failed to import module 'ForceField' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ForceField.rdForceField' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Geometry' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Geometry.rdGeometry' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.AnalyzeComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.BuildComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Butina' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.ClusterUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.ClusterVis' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Clustering' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Clusters' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Murtagh' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Resemblance' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Cluster.Standardize' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Composite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Composite.AdjustComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Composite.BayesComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Composite.Composite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.CompositeRun' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.DataUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.FindQuantBounds' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.MLData' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.Quantize' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.SplitData' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.Stats' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Data.Transforms' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.BuildQuantTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.BuildSigTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.CrossValidate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.DecTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.Forest' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.ID3' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.PruneTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.QuantTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.SigTree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.Tree' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.TreeUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.TreeVis' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.DecTree.randomtest' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors.CompoundDescriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors.Descriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors.MoleculeDescriptors' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Descriptors.Parser' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.EnrichPlot' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.GrowComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.InfoTheory' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.InfoTheory.BitClusterer' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.InfoTheory.BitRank' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.InfoTheory.entropy' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
/<<PKGBUILDDIR>>/Docs/Book/source/rdkit.ML.InfoTheory.rdInfoTheory.rst:2: WARNING: Title underline too short.

rdkit.ML.InfoTheory.rdInfoTheory module
======================================
WARNING: autodoc: failed to import module 'ML.InfoTheory.rdInfoTheory' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.CrossValidate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.DistFunctions' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.KNNClassificationModel' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.KNNModel' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.KNN.KNNRegressionModel' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.MLUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.MLUtils.VoteImg' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.MatOps' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.ModelPackage' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.ModelPackage.PackageUtils' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.ModelPackage.Packager' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.NaiveBayes' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.NaiveBayes.ClassificationModel' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.NaiveBayes.CrossValidate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.ActFuncs' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.CrossValidate' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.NetNode' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.Network' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Neural.Trainers' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.SLT' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.SLT.Risk' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Scoring' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.Scoring.Scoring' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.ScreenComposite' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'ML.files' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Numerics' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'Numerics.rdAlignment' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'RDConfig' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
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No module named 'rdkit'
WARNING: autodoc: failed to import module 'RDPaths' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
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No module named 'rdkit'
WARNING: autodoc: failed to import module 'SimDivFilters' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
WARNING: autodoc: failed to import module 'VLib' from module 'rdkit'; the following exception was raised:
No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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processing RDKit.tex...index Overview Install GettingStartedInPython RDKit_Book Cookbook Cartridge BackwardsIncompatibleChanges api-docs source/rdkit source/rdkit.Avalon source/rdkit.Avalon.pyAvalonTools source/rdkit.Chem source/rdkit.Chem.AtomPairs source/rdkit.Chem.AtomPairs.Pairs source/rdkit.Chem.AtomPairs.Sheridan source/rdkit.Chem.AtomPairs.Torsions source/rdkit.Chem.AtomPairs.Utils source/rdkit.Chem.ChemUtils source/rdkit.Chem.ChemUtils.AlignDepict source/rdkit.Chem.ChemUtils.BulkTester source/rdkit.Chem.ChemUtils.DescriptorUtilities source/rdkit.Chem.ChemUtils.SDFToCSV source/rdkit.Chem.ChemUtils.TemplateExpand source/rdkit.Chem.Draw source/rdkit.Chem.Draw.IPythonConsole source/rdkit.Chem.Draw.MolDrawing source/rdkit.Chem.Draw.SimilarityMaps source/rdkit.Chem.Draw.rdMolDraw2D source/rdkit.Chem.Draw.aggCanvas source/rdkit.Chem.Draw.cairoCanvas source/rdkit.Chem.Draw.canvasbase source/rdkit.Chem.Draw.mplCanvas source/rdkit.Chem.Draw.qtCanvas source/rdkit.Chem.EState source/rdkit.Chem.EState.AtomTypes source/rdkit.Chem.EState.EState source/rdkit.Chem.EState.EState_VSA source/rdkit.Chem.EState.Fingerprinter source/rdkit.Chem.FeatMaps source/rdkit.Chem.FeatMaps.FeatMapParser source/rdkit.Chem.FeatMaps.FeatMapPoint source/rdkit.Chem.FeatMaps.FeatMapUtils source/rdkit.Chem.FeatMaps.FeatMaps source/rdkit.Chem.Features source/rdkit.Chem.Features.FeatDirUtilsRD source/rdkit.Chem.Features.ShowFeats source/rdkit.Chem.Fingerprints source/rdkit.Chem.Fingerprints.ClusterMols source/rdkit.Chem.Fingerprints.DbFpSupplier source/rdkit.Chem.Fingerprints.FingerprintMols source/rdkit.Chem.Fingerprints.MolSimilarity source/rdkit.Chem.Fingerprints.SimilarityScreener source/rdkit.Chem.Fraggle source/rdkit.Chem.Fraggle.FraggleSim source/rdkit.Chem.MolDb source/rdkit.Chem.MolDb.FingerprintUtils source/rdkit.Chem.MolDb.Loader source/rdkit.Chem.MolDb.Loader_orig source/rdkit.Chem.MolDb.Loader_sa source/rdkit.Chem.MolKey source/rdkit.Chem.MolKey.InchiInfo source/rdkit.Chem.MolKey.MolKey source/rdkit.Chem.Pharm2D source/rdkit.Chem.Pharm2D.Generate source/rdkit.Chem.Pharm2D.Gobbi_Pharm2D source/rdkit.Chem.Pharm2D.LazyGenerator source/rdkit.Chem.Pharm2D.Matcher source/rdkit.Chem.Pharm2D.SigFactory source/rdkit.Chem.Pharm2D.Utils source/rdkit.Chem.Pharm3D source/rdkit.Chem.Pharm3D.EmbedLib source/rdkit.Chem.Pharm3D.ExcludedVolume source/rdkit.Chem.Pharm3D.Pharmacophore source/rdkit.Chem.Scaffolds source/rdkit.Chem.Scaffolds.MurckoScaffold source/rdkit.Chem.Scaffolds.ScaffoldTree source/rdkit.Chem.SimpleEnum source/rdkit.Chem.SimpleEnum.Enumerator source/rdkit.Chem.Subshape source/rdkit.Chem.Subshape.BuilderUtils source/rdkit.Chem.Subshape.SubshapeAligner source/rdkit.Chem.Subshape.SubshapeBuilder source/rdkit.Chem.Subshape.SubshapeObjects source/rdkit.Chem.Subshape.testCombined source/rdkit.Chem.Suppliers source/rdkit.Chem.Suppliers.DbMolSupplier source/rdkit.Chem.Suppliers.MolSupplier source/rdkit.Chem.fmcs source/rdkit.Chem.fmcs.fmcs source/rdkit.Chem.AllChem source/rdkit.Chem.BRICS source/rdkit.Chem.BuildFragmentCatalog source/rdkit.Chem.ChemicalFeatures source/rdkit.Chem.ChemicalForceFields source/rdkit.Chem.Crippen source/rdkit.Chem.DSViewer source/rdkit.Chem.Descriptors source/rdkit.Chem.Descriptors3D source/rdkit.Chem.EnumerateHeterocycles source/rdkit.Chem.EnumerateStereoisomers source/rdkit.Chem.FastSDMolSupplier source/rdkit.Chem.FeatFinderCLI source/rdkit.Chem.FilterCatalog source/rdkit.Chem.FragmentCatalog source/rdkit.Chem.FragmentMatcher source/rdkit.Chem.Fragments source/rdkit.Chem.FunctionalGroups source/rdkit.Chem.GraphDescriptors source/rdkit.Chem.Graphs source/rdkit.Chem.Lipinski source/rdkit.Chem.MACCSkeys source/rdkit.Chem.MCS source/rdkit.Chem.MolCatalog source/rdkit.Chem.MolStandardize source/rdkit.Chem.MolStandardize.rdMolStandardize source/rdkit.Chem.MolSurf source/rdkit.Chem.PandasTools source/rdkit.Chem.PeriodicTable source/rdkit.Chem.PropertyMol source/rdkit.Chem.PyMol source/rdkit.Chem.QED source/rdkit.Chem.Randomize source/rdkit.Chem.Recap source/rdkit.Chem.ReducedGraphs source/rdkit.Chem.SATIS source/rdkit.Chem.SaltRemover source/rdkit.Chem.ShowMols source/rdkit.Chem.TemplateAlign source/rdkit.Chem.TorsionFingerprints source/rdkit.Chem.inchi source/rdkit.Chem.rdchem source/rdkit.Chem.rdDistGeom source/rdkit.Chem.rdqueries source/rdkit.Chem.rdFMCS source/rdkit.Chem.rdMolAlign source/rdkit.Chem.rdMolHash source/rdkit.Chem.rdReducedGraphs source/rdkit.Chem.rdtrajectory source/rdkit.Chem.rdMolTransforms source/rdkit.Chem.rdmolfiles source/rdkit.Chem.rdPartialCharges source/rdkit.Chem.rdMolCatalog source/rdkit.Chem.rdCoordGen source/rdkit.Chem.rdMolChemicalFeatures source/rdkit.Chem.rdMMPA source/rdkit.Chem.rdRGroupDecomposition source/rdkit.Chem.rdForceFieldHelpers source/rdkit.Chem.rdDepictor source/rdkit.Chem.rdChemicalFeatures source/rdkit.Chem.rdmolops source/rdkit.Chem.rdFreeSASA source/rdkit.Chem.rdMolInterchange source/rdkit.Chem.rdShapeHelpers source/rdkit.Chem.rdinchi source/rdkit.Chem.rdChemReactions source/rdkit.Chem.rdSubstructLibrary source/rdkit.Chem.rdfiltercatalog source/rdkit.Chem.rdfragcatalog source/rdkit.Chem.rdStructChecker source/rdkit.Chem.rdMolDescriptors source/rdkit.Chem.rdFingerprintGenerator source/rdkit.Chem.rdSLNParse source/rdkit.DataManip source/rdkit.DataManip.Metric source/rdkit.DataManip.Metric.rdMetricMatrixCalc source/rdkit.DataStructs source/rdkit.DataStructs.BitEnsemble source/rdkit.DataStructs.BitEnsembleDb source/rdkit.DataStructs.BitUtils source/rdkit.DataStructs.HierarchyVis source/rdkit.DataStructs.LazySignature source/rdkit.DataStructs.TopNContainer source/rdkit.DataStructs.VectCollection source/rdkit.DataStructs.cDataStructs source/rdkit.Dbase source/rdkit.Dbase.DbConnection source/rdkit.Dbase.DbInfo source/rdkit.Dbase.DbModule source/rdkit.Dbase.DbReport source/rdkit.Dbase.DbResultSet source/rdkit.Dbase.DbUtils source/rdkit.Dbase.StorageUtils source/rdkit.DistanceGeometry source/rdkit.DistanceGeometry.DistGeom source/rdkit.ForceField source/rdkit.ForceField.rdForceField source/rdkit.Geometry source/rdkit.Geometry.rdGeometry source/rdkit.ML source/rdkit.ML.Cluster source/rdkit.ML.Cluster.Butina source/rdkit.ML.Cluster.ClusterUtils source/rdkit.ML.Cluster.ClusterVis source/rdkit.ML.Cluster.Clusters source/rdkit.ML.Cluster.Murtagh source/rdkit.ML.Cluster.Resemblance source/rdkit.ML.Cluster.Standardize source/rdkit.ML.Cluster.Clustering source/rdkit.ML.Composite source/rdkit.ML.Composite.AdjustComposite source/rdkit.ML.Composite.BayesComposite source/rdkit.ML.Composite.Composite source/rdkit.ML.Data source/rdkit.ML.Data.DataUtils source/rdkit.ML.Data.FindQuantBounds source/rdkit.ML.Data.MLData source/rdkit.ML.Data.Quantize source/rdkit.ML.Data.SplitData source/rdkit.ML.Data.Stats source/rdkit.ML.Data.Transforms source/rdkit.ML.DecTree source/rdkit.ML.DecTree.BuildQuantTree source/rdkit.ML.DecTree.BuildSigTree source/rdkit.ML.DecTree.CrossValidate source/rdkit.ML.DecTree.DecTree source/rdkit.ML.DecTree.Forest source/rdkit.ML.DecTree.ID3 source/rdkit.ML.DecTree.PruneTree source/rdkit.ML.DecTree.QuantTree source/rdkit.ML.DecTree.SigTree source/rdkit.ML.DecTree.Tree source/rdkit.ML.DecTree.TreeUtils source/rdkit.ML.DecTree.TreeVis source/rdkit.ML.DecTree.randomtest source/rdkit.ML.Descriptors source/rdkit.ML.Descriptors.CompoundDescriptors source/rdkit.ML.Descriptors.Descriptors source/rdkit.ML.Descriptors.MoleculeDescriptors source/rdkit.ML.Descriptors.Parser source/rdkit.ML.InfoTheory source/rdkit.ML.InfoTheory.BitClusterer source/rdkit.ML.InfoTheory.BitRank source/rdkit.ML.InfoTheory.entropy source/rdkit.ML.InfoTheory.rdInfoTheory source/rdkit.ML.KNN source/rdkit.ML.KNN.CrossValidate source/rdkit.ML.KNN.DistFunctions source/rdkit.ML.KNN.KNNClassificationModel source/rdkit.ML.KNN.KNNModel source/rdkit.ML.KNN.KNNRegressionModel source/rdkit.ML.MLUtils source/rdkit.ML.MLUtils.VoteImg source/rdkit.ML.ModelPackage source/rdkit.ML.ModelPackage.PackageUtils source/rdkit.ML.ModelPackage.Packager source/rdkit.ML.NaiveBayes source/rdkit.ML.NaiveBayes.ClassificationModel source/rdkit.ML.NaiveBayes.CrossValidate source/rdkit.ML.Neural source/rdkit.ML.Neural.ActFuncs source/rdkit.ML.Neural.CrossValidate source/rdkit.ML.Neural.NetNode source/rdkit.ML.Neural.Network source/rdkit.ML.Neural.Trainers source/rdkit.ML.SLT source/rdkit.ML.SLT.Risk source/rdkit.ML.Scoring source/rdkit.ML.Scoring.Scoring source/rdkit.ML.AnalyzeComposite source/rdkit.ML.BuildComposite source/rdkit.ML.CompositeRun source/rdkit.ML.EnrichPlot source/rdkit.ML.GrowComposite source/rdkit.ML.MatOps source/rdkit.ML.ScreenComposite source/rdkit.ML.files source/rdkit.Numerics source/rdkit.Numerics.rdAlignment source/rdkit.SimDivFilters source/rdkit.SimDivFilters.SimilarityPickers source/rdkit.SimDivFilters.rdSimDivPickers source/rdkit.VLib source/rdkit.VLib.NodeLib source/rdkit.VLib.NodeLib.DbMolSupply 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[]\T1/ptm/m/n/10 IPython note-book: [][]$http : / / nbviewer . ipython . org / 
gist / greglandrum / 8351725$[][] [][]$https : / / gist . github . com / gregla
ndrum /
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Chapter 6.
[111] [112] [113] [114]
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Chapter 7.
[129] [130] [131] [132]
Chapter 8.
[133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144]
[145] [146] [147] [148] [149] [150]
Chapter 9.
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Chapter 10.
No file RDKit.ind.

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)<<ot1.cmap>><<oml.cmap>><<oms.cmap>><<omx.cmap>>
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Chapter 1.
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[]\T1/ptm/m/n/10 Cheminformatics nodes for KN-IME (dis-tributed from the KN-IME
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[1]

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Chapter 3.
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[]\T1/ptm/m/n/10 More fine-grained con-trol can be ob-tained us-ing the core fu
nc-tion \T1/pcr/m/n/10 rdkit.Chem.rdDepictor.
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[]\T1/ptm/m/n/10 Acidic| 
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Chapter 4.
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opy)>] [71 <./picture_10.png> <./picture_12.png>] [72 <./picture_11.png>]
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[]\T1/ptm/m/n/10 By de-fault the \T1/pcr/m/n/10 rdkit.Chem.rdmolfiles.SDMolSupp
lier \T1/ptm/m/n/10 and \T1/pcr/m/n/10 rdkit.Chem.rdmolfiles.

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\T1/pcr/m/n/10 ForwardSDMolSupplier \T1/ptm/m/n/10 classes (\T1/pcr/m/n/10 RDKi
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[]\T1/ptm/m/n/10 If you have atom prop-er-ties that you would like to have writ
-ten to SDF files, you can

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and.png> <./enhanced_stereo_and1_trans_base.png> <./enhanced_stereo_and1_trans_
expand.png> <./enhanced_stereo_or1_or2_base.png> <./enhanced_stereo_or1_cis_bas
e.png> <./enhanced_stereo_or1_trans_base.png> <./enhanced_stereo_abs_and_base.p
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[]\T1/ptm/m/n/10 It is pos-si-ble to enu-mer-ate the el-e-ments of a \T1/pcr/m/
n/10 StereoGroup \T1/ptm/m/n/10 us-ing the func-tion \T1/pcr/m/n/10 rdkit.Chem.


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[]\T1/ptm/m/n/10 Reactions also pre-serve \T1/pcr/m/n/10 StereoGroup\TS1/cmtt/m
/n/10 ``\T1/pcr/m/n/10 s. Product atoms are included in the
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Chapter 5.
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[]\T1/ptm/m/n/10 IPython note-book: [][]$http : / / nbviewer . ipython . org / 
gist / greglandrum / 8351725$[][] [][]$https : / / gist . github . com / gregla
ndrum /
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Chapter 6.
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[]\T1/pcr/m/n/9 CC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)[C[]@[][]\T1/pcr/b/n/
9 @H[]\T1/pcr/m/n/9 ][]1[]NC([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][
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](C)CC)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CO)NC([]=[]O)[C[]\T1/pcr
/b/n/9 @H[]\T1/pcr/m/n/9 ](C)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ]([C
[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)O)NC([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T
1/pcr/m/n/9 ][]2[]CSSC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](NC1[]=[]O)C([]=[]O)
N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc1cnc[nH][]1[])C([]=[]O)N[C[]\T1/p
cr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc1ccccc1)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1
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](Cc1c[nH]c3ccccc13)C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CCCNC(
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N)NC([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2ccc(O)cc2)NC([]=[]O)[
C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]2[]CCCN2C([]=[]O)[C[]\T1/pcr/b/n/9 @
H[]\T1/pcr/m/n/9 ](Cc2ccc3ccccc3c2)NC([]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr
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[]\T1/pcr/m/n/9 NCCCC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](NC([]=[]O)[C[]\T1/pc
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[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)C([]=[]O)N[C[]\T1/pcr/b/n/9 @H[
]\T1/pcr/m/n/9 ](C([]=[]O)N1CCC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]1[]C([]=[
]O)N1CCC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]1[]C([]=[]O)N[C[]\T1/pcr/b/n/9 @
H[]\T1/pcr/m/n/9 ](CCC([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CCC([
]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CC(C)C)C([]=[]O)O)Cc1ccccc1)C
c1ccccc1)C(C)C)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C)CC|  
[116] [117] [118]
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[121] [122] [123] [124] [125] [126] [127] [128]
Chapter 7.
[129] [130] [131] [132]
Chapter 8.
[133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144]
[145] [146] [147] [148] [149] [150]
Chapter 9.
[151] [152]
Chapter 10.
(./RDKit.ind) [153] (./RDKit.aux)

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[]\T1/ptm/m/n/10 Cheminformatics nodes for KN-IME (dis-tributed from the KN-IME
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[]\T1/ptm/m/n/10 More fine-grained con-trol can be ob-tained us-ing the core fu
nc-tion \T1/pcr/m/n/10 rdkit.Chem.rdDepictor.
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> <./cdk2_mol2.png>] [30 <./cdk2_molgrid.png>] [31 <./cdk2_molgrid_aligned.png 
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[]\T1/ptm/m/n/10 Or we can use the bit rank-ing func-tion-al-ity from the \T1/p
cr/m/n/10 rdkit.ML.InfoTheory.rdInfoTheory.
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[]\T1/pcr/m/n/10 [$([O,S;H1;v2;!$(*-*=[O,N,P,S])]),$([O,S;H0;v2]),$([O,S;-]),$(
[N;v3;!

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]);!

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[]\T1/ptm/m/n/10 Acidic| 
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Chapter 4.
[69 <./picture_9.png (PNG copy)>] [70 <./picture_8.png> <./picture_7.png (PNG c
opy)>] [71 <./picture_10.png> <./picture_12.png>] [72 <./picture_11.png>]
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[]\T1/ptm/m/n/10 By de-fault the \T1/pcr/m/n/10 rdkit.Chem.rdmolfiles.SDMolSupp
lier \T1/ptm/m/n/10 and \T1/pcr/m/n/10 rdkit.Chem.rdmolfiles.

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\T1/pcr/m/n/10 ForwardSDMolSupplier \T1/ptm/m/n/10 classes (\T1/pcr/m/n/10 RDKi
t::SDMolSupplier \T1/ptm/m/n/10 and \T1/pcr/m/n/10 RDKit::ForwardMolSupplier

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[]\T1/ptm/m/n/10 If you have atom prop-er-ties that you would like to have writ
-ten to SDF files, you can

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\T1/ptm/m/n/10 use the func-tions \T1/pcr/m/n/10 rdkit.Chem.rdmolfiles.CreateAt
omStringPropertyList()\T1/ptm/m/n/10 ,

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, \T1/pcr/m/n/10 rdkit.Chem.

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pand.png> <./enhanced_stereo_and1_cis_base.png> <./enhanced_stereo_and1_cis_exp
and.png> <./enhanced_stereo_and1_trans_base.png> <./enhanced_stereo_and1_trans_
expand.png> <./enhanced_stereo_or1_or2_base.png> <./enhanced_stereo_or1_cis_bas
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[]\T1/ptm/m/n/10 It is pos-si-ble to enu-mer-ate the el-e-ments of a \T1/pcr/m/
n/10 StereoGroup \T1/ptm/m/n/10 us-ing the func-tion \T1/pcr/m/n/10 rdkit.Chem.


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[]\T1/ptm/m/n/10 Reactions also pre-serve \T1/pcr/m/n/10 StereoGroup\TS1/cmtt/m
/n/10 ``\T1/pcr/m/n/10 s. Product atoms are included in the
[92] [93] [94]
Chapter 5.
[95] [96 <./indole1.png>]
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[]\T1/ptm/m/n/10 IPython note-book: [][]$http : / / nbviewer . ipython . org / 
gist / greglandrum / 8351725$[][] [][]$https : / / gist . github . com / gregla
ndrum /
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Chapter 6.
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[116] [117] [118]
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[121] [122] [123] [124] [125] [126] [127] [128]
Chapter 7.
[129] [130] [131] [132]
Chapter 8.
[133] [134] [135] [136] [137] [138] [139] [140] [141] [142] [143] [144]
[145] [146] [147] [148] [149] [150]
Chapter 9.
[151] [152]
Chapter 10.
(./RDKit.ind) [153] (./RDKit.aux)

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make[3]: Leaving directory '/<<PKGBUILDDIR>>/Docs/Book/_build/latex'
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   debian/rules override_dh_auto_test
make[1]: Entering directory '/<<PKGBUILDDIR>>'
cp -r rdkit obj-*/
find /<<PKGBUILDDIR>> -name rdchem.so
/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/rdkit/Chem/rdchem.so
#export RDBASE=/<<PKGBUILDDIR>> PYTHONPATH=/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/ LD_LIBRARY_PATH="/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf//lib:"
PYTHONPATH=/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/:/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf//rdkit/Chem/ LD_LIBRARY_PATH="/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf//lib:" dh_auto_test
	cd obj-arm-linux-gnueabihf && make -j4 test ARGS\+=-j4
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Running tests...
/usr/bin/ctest --force-new-ctest-process -j4
Test project /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf
        Start   1: testCoordGen
        Start   2: pyCoordGen
        Start   3: testDict
        Start   4: testRDValue
  1/158 Test   #4: testRDValue ............................   Passed    0.21 sec
        Start   5: testDataStructs
  2/158 Test   #5: testDataStructs ........................   Passed    0.13 sec
        Start   6: testFPB
  3/158 Test   #6: testFPB ................................   Passed    0.10 sec
        Start   7: testMultiFPB
  4/158 Test   #7: testMultiFPB ...........................   Passed    0.10 sec
        Start   8: pyBV
  5/158 Test   #2: pyCoordGen .............................***Exception: SegFault  3.05 sec

        Start   9: pyDiscreteValueVect
  6/158 Test   #9: pyDiscreteValueVect ....................   Passed    1.93 sec
        Start  10: pySparseIntVect
  7/158 Test   #1: testCoordGen ...........................   Passed    6.22 sec
        Start  11: pyFPB
  8/158 Test  #10: pySparseIntVect ........................   Passed    1.88 sec
        Start  12: testTransforms
  9/158 Test  #12: testTransforms .........................   Passed    0.08 sec
        Start  13: testGrid
 10/158 Test  #13: testGrid ...............................   Passed    0.42 sec
        Start  14: geometryTestsCatch
 11/158 Test  #14: geometryTestsCatch .....................   Passed    0.10 sec
        Start  15: testPyGeometry
 12/158 Test   #8: pyBV ...................................   Passed    7.68 sec
        Start  16: testMatrices
 13/158 Test  #11: pyFPB ..................................   Passed    2.18 sec
        Start  17: testConrec
 14/158 Test  #16: testMatrices ...........................   Passed    0.12 sec
        Start  18: testAlignment
 15/158 Test  #18: testAlignment ..........................   Passed    0.10 sec
        Start  19: pyAlignment
 16/158 Test  #17: testConrec .............................   Passed    0.46 sec
        Start  20: testOptimizer
 17/158 Test  #20: testOptimizer ..........................   Passed    0.05 sec
        Start  21: testUFFForceField
 18/158 Test  #21: testUFFForceField ......................   Passed    0.73 sec
        Start  22: testMMFFForceField
 19/158 Test  #15: testPyGeometry .........................   Passed    2.66 sec
        Start  23: pyForceFieldConstraints
 20/158 Test  #19: pyAlignment ............................   Passed    2.29 sec
        Start  24: testDistGeom
 21/158 Test  #24: testDistGeom ...........................   Passed    0.13 sec
        Start  25: pyDistGeom
 22/158 Test   #3: testDict ...............................   Passed   12.07 sec
        Start  26: graphmolTest1
 23/158 Test  #23: pyForceFieldConstraints ................***Exception: SegFault  2.04 sec

        Start  27: graphmolcpTest
 24/158 Test  #27: graphmolcpTest .........................   Passed    0.18 sec
        Start  28: graphmolqueryTest
 25/158 Test  #28: graphmolqueryTest ......................   Passed    0.21 sec
        Start  29: graphmolMolOpsTest
 26/158 Test  #25: pyDistGeom .............................   Passed    2.19 sec
        Start  30: graphmoltestChirality
 27/158 Test  #30: graphmoltestChirality ..................   Passed    0.46 sec
        Start  31: graphmoltestPickler
 28/158 Test  #31: graphmoltestPickler ....................   Passed    2.25 sec
        Start  32: graphmoltestPicklerGlobalSetting
 29/158 Test  #32: graphmoltestPicklerGlobalSetting .......   Passed    0.20 sec
        Start  33: graphmolIterTest
 30/158 Test  #33: graphmolIterTest .......................   Passed    0.17 sec
        Start  34: hanoiTest
 31/158 Test  #29: graphmolMolOpsTest .....................   Passed   14.28 sec
        Start  35: graphmolMemTest1
 32/158 Test  #35: graphmolMemTest1 .......................   Passed    0.11 sec
        Start  36: resMolSupplierTest
 33/158 Test  #36: resMolSupplierTest .....................   Passed    4.89 sec
        Start  37: molBundleTest
 34/158 Test  #37: molBundleTest ..........................   Passed    0.26 sec
        Start  38: testSGroup
 35/158 Test  #38: testSGroup .............................   Passed    0.24 sec
        Start  39: test-valgrind
 36/158 Test  #39: test-valgrind ..........................   Passed    0.19 sec
        Start  40: graphmolTestsCatch
 37/158 Test  #40: graphmolTestsCatch .....................   Passed    0.37 sec
        Start  41: graphmolSGroupCatch
 38/158 Test  #41: graphmolSGroupCatch ....................   Passed    0.18 sec
        Start  42: testDepictor
 39/158 Test  #42: testDepictor ...........................   Passed    2.33 sec
        Start  43: pyDepictor
 40/158 Test  #43: pyDepictor .............................***Exception: SegFault  2.30 sec

        Start  44: smiTest1
 41/158 Test  #44: smiTest1 ...............................   Passed    1.72 sec
        Start  45: smiTest2
 42/158 Test  #45: smiTest2 ...............................   Passed    0.11 sec
        Start  46: cxsmilesTest
 43/158 Test  #46: cxsmilesTest ...........................   Passed    0.19 sec
        Start  47: smaTest1
 44/158 Test  #47: smaTest1 ...............................   Passed    1.32 sec
        Start  48: smiTestCatch
 45/158 Test  #48: smiTestCatch ...........................   Passed    0.34 sec
        Start  49: fileParsersTest1
 46/158 Test  #49: fileParsersTest1 .......................   Passed  115.74 sec
        Start  50: testMolSupplier
 47/158 Test  #50: testMolSupplier ........................   Passed    2.95 sec
        Start  51: testMolWriter
 48/158 Test  #51: testMolWriter ..........................   Passed    2.31 sec
        Start  52: testTplParser
 49/158 Test  #52: testTplParser ..........................   Passed    0.26 sec
        Start  53: testMol2ToMol
 50/158 Test  #53: testMol2ToMol ..........................   Passed    0.31 sec
        Start  54: testSequence
 51/158 Test  #54: testSequence ...........................   Passed    0.32 sec
        Start  55: testExtendedStereoParsing
 52/158 Test  #55: testExtendedStereoParsing ..............   Passed    0.19 sec
        Start  56: fileParsersCatchTest
 53/158 Test  #56: fileParsersCatchTest ...................   Passed    0.36 sec
        Start  57: testPropertyLists
 54/158 Test  #57: testPropertyLists ......................   Passed    0.31 sec
        Start  58: testSubstructMatch
 55/158 Test  #58: testSubstructMatch .....................   Passed    2.63 sec
        Start  59: substructTestCatch
 56/158 Test  #59: substructTestCatch .....................   Passed    0.31 sec
        Start  60: testReaction
 57/158 Test  #60: testReaction ...........................   Passed    3.97 sec
        Start  61: testReactionFingerprints
 58/158 Test  #61: testReactionFingerprints ...............   Passed    0.38 sec
        Start  62: testEnumeration
 59/158 Test  #22: testMMFFForceField .....................   Passed  174.18 sec
        Start  63: rxnTestCatch
 60/158 Test  #63: rxnTestCatch ...........................   Passed    0.71 sec
        Start  64: pyChemReactions
 61/158 Test  #64: pyChemReactions ........................***Exception: SegFault  2.88 sec

        Start  65: pyChemReactionEnumerations
 62/158 Test  #65: pyChemReactionEnumerations .............***Exception: SegFault 23.34 sec

        Start  66: pyChemReactionSanitize
 63/158 Test  #34: hanoiTest ..............................   Passed  205.60 sec
        Start  67: testChemTransforms
 64/158 Test  #66: pyChemReactionSanitize .................***Exception: SegFault 16.62 sec

        Start  68: chemTransformsTestCatch
 65/158 Test  #68: chemTransformsTestCatch ................   Passed    0.55 sec
        Start  69: testSubgraphs1
 66/158 Test  #67: testChemTransforms .....................   Passed    1.42 sec
        Start  70: testSubgraphs2
 67/158 Test  #70: testSubgraphs2 .........................   Passed    0.31 sec
        Start  71: filterCatalogTest
 68/158 Test  #69: testSubgraphs1 .........................   Passed    2.07 sec
        Start  72: pyFilterCatalog
 69/158 Test  #71: filterCatalogTest ......................   Passed    1.81 sec
        Start  73: testFragCatalog
 70/158 Test  #72: pyFilterCatalog ........................***Exception: SegFault  2.80 sec

        Start  74: pyFragCatalog
 71/158 Test  #74: pyFragCatalog ..........................***Exception: SegFault  2.30 sec

        Start  75: testDescriptors
 72/158 Test  #73: testFragCatalog ........................   Passed    7.20 sec
        Start  76: testAUTOCORR2D
 73/158 Test  #76: testAUTOCORR2D .........................   Passed    4.85 sec
        Start  77: pyMolDescriptors
 74/158 Test  #77: pyMolDescriptors .......................***Exception: SegFault  3.97 sec

        Start  78: pyMolDescriptors3D
 75/158 Test  #78: pyMolDescriptors3D .....................***Exception: SegFault  3.99 sec

        Start  79: testFingerprints
 76/158 Test  #75: testDescriptors ........................   Passed   35.04 sec
        Start  80: testFingerprintGenerators
 77/158 Test  #79: testFingerprints .......................   Passed   48.72 sec
        Start  81: fpTestCatch
 78/158 Test  #81: fpTestCatch ............................   Passed    8.17 sec
        Start  82: pyTestGenerator
 79/158 Test  #80: testFingerprintGenerators ..............   Passed   46.21 sec
        Start  83: testPartialCharges
 80/158 Test  #83: testPartialCharges .....................   Passed    0.66 sec
        Start  84: pyPartialCharges
 81/158 Test  #82: pyTestGenerator ........................***Exception: SegFault 12.41 sec

        Start  85: testMolTransforms
 82/158 Test  #84: pyPartialCharges .......................***Exception: SegFault 11.47 sec

        Start  86: pyMolTransforms
 83/158 Test  #85: testMolTransforms ......................   Passed    1.36 sec
        Start  87: testMMFFForceFieldHelpers
 84/158 Test  #86: pyMolTransforms ........................***Exception: SegFault  2.97 sec

        Start  88: testMMFFForceFieldHelpersMultiThread
 85/158 Test  #88: testMMFFForceFieldHelpersMultiThread ...   Passed    3.01 sec
        Start  89: testUFFForceFieldHelpers
 86/158 Test  #87: testMMFFForceFieldHelpers ..............   Passed   73.29 sec
        Start  90: testCrystalForceField
 87/158 Test  #90: testCrystalForceField ..................   Passed    0.73 sec
        Start  91: pyForceFieldHelpers
 88/158 Test  #91: pyForceFieldHelpers ....................***Exception: SegFault  3.05 sec

        Start  92: testDistGeomHelpers
 89/158 Test  #89: testUFFForceFieldHelpers ...............   Passed   74.10 sec
        Start  93: pyDistGeomHelpers
 90/158 Test  #93: pyDistGeomHelpers ......................***Exception: SegFault  2.62 sec

        Start  94: testMolAlign
 91/158 Test  #62: testEnumeration ........................   Passed  256.91 sec
        Start  95: pyMolAlign
 92/158 Test  #95: pyMolAlign .............................***Exception: SegFault  3.22 sec

        Start  96: testFeatures
 93/158 Test  #96: testFeatures ...........................   Passed    0.50 sec
        Start  97: pyChemicalFeatures
 94/158 Test  #97: pyChemicalFeatures .....................***Exception: SegFault  3.19 sec

        Start  98: testShapeHelpers
 95/158 Test  #98: testShapeHelpers .......................   Passed    0.51 sec
        Start  99: pyShapeHelpers
 96/158 Test  #99: pyShapeHelpers .........................***Exception: SegFault  2.77 sec

        Start 100: testMolCatalog
 97/158 Test #100: testMolCatalog .........................   Passed    0.37 sec
        Start 101: pyMolCatalog
 98/158 Test #101: pyMolCatalog ...........................***Exception: SegFault  3.50 sec

        Start 102: moldraw2DTest1
 99/158 Test #102: moldraw2DTest1 .........................   Passed   30.63 sec
        Start 103: moldraw2DTestCatch
100/158 Test #103: moldraw2DTestCatch .....................   Passed    0.98 sec
        Start 104: moldraw2DRxnTest1
101/158 Test #104: moldraw2DRxnTest1 ......................   Passed    0.73 sec
        Start 105: pyMolDraw2D
102/158 Test #105: pyMolDraw2D ............................***Exception: SegFault  3.04 sec

        Start 106: testFMCS
103/158 Test #106: testFMCS ...............................   Passed   35.35 sec
        Start 107: pyFMCS
104/158 Test #107: pyFMCS .................................***Exception: SegFault  5.37 sec

        Start 108: FMCStest
105/158 Test #108: FMCStest ...............................   Passed    0.39 sec
        Start 109: testMolHash
106/158 Test #109: testMolHash ............................   Passed    1.24 sec
        Start 110: molHashCatchTest
107/158 Test #110: molHashCatchTest .......................   Passed    0.61 sec
        Start 111: pyMolHash
108/158 Test #111: pyMolHash ..............................***Exception: SegFault  5.02 sec

        Start 112: testMMPA
109/158 Test #112: testMMPA ...............................   Passed    1.72 sec
        Start 113: pyMMPA
110/158 Test #113: pyMMPA .................................***Exception: SegFault  2.44 sec

        Start 114: testStructChecker
111/158 Test #114: testStructChecker ......................   Passed    0.73 sec
        Start 115: pyStructChecker
112/158 Test #115: pyStructChecker ........................***Exception: SegFault  1.87 sec

        Start 116: testReducedGraphs
113/158 Test #116: testReducedGraphs ......................   Passed    0.42 sec
        Start 117: pyReducedGraphs
114/158 Test #117: pyReducedGraphs ........................***Exception: SegFault  1.92 sec

        Start 118: trajectoryTest
115/158 Test #118: trajectoryTest .........................   Passed    4.76 sec
        Start 119: substructLibraryTest
116/158 Test #119: substructLibraryTest ...................   Passed    3.41 sec
        Start 120: pySubstructLibrary
117/158 Test #120: pySubstructLibrary .....................***Exception: SegFault  2.49 sec

        Start 121: testRGroupDecomp
118/158 Test #121: testRGroupDecomp .......................   Passed    4.30 sec
        Start 122: pyRGroupDecomposition
119/158 Test #122: pyRGroupDecomposition ..................***Exception: SegFault  1.94 sec

        Start 123: molInterchangeTest1
120/158 Test #123: molInterchangeTest1 ....................   Passed    0.36 sec
        Start 124: pyMolInterchange
121/158 Test #124: pyMolInterchange .......................***Exception: SegFault  1.90 sec

        Start 125: testSLNParse
122/158 Test #125: testSLNParse ...........................   Passed    0.45 sec
        Start 126: pySLNParse
123/158 Test #126: pySLNParse .............................***Exception: SegFault  2.46 sec

        Start 127: pyGraphMolWrap
124/158 Test #127: pyGraphMolWrap .........................***Exception: SegFault  3.29 sec

        Start 128: pyTestConformerWrap
125/158 Test #128: pyTestConformerWrap ....................***Exception: SegFault  1.98 sec

        Start 129: pyTestTrajectory
126/158 Test #129: pyTestTrajectory .......................***Exception: SegFault  1.99 sec

        Start 130: pyTestSGroups
127/158 Test #130: pyTestSGroups ..........................***Exception: SegFault  2.71 sec

        Start 131: pyTestThreads
128/158 Test #131: pyTestThreads ..........................***Exception: SegFault  2.32 sec

        Start 132: pyTestPropertyLists
129/158 Test #132: pyTestPropertyLists ....................***Exception: SegFault  2.06 sec

        Start 133: molStandardizeTest
130/158 Test #133: molStandardizeTest .....................   Passed    1.28 sec
        Start 134: molNormalizeTest
131/158 Test #134: molNormalizeTest .......................   Passed    0.96 sec
        Start 135: molValidateTest
132/158 Test #135: molValidateTest ........................   Passed    0.82 sec
        Start 136: molChargeTest
133/158 Test #136: molChargeTest ..........................   Passed    1.17 sec
        Start 137: molTautomerTest
134/158 Test #137: molTautomerTest ........................   Passed    9.40 sec
        Start 138: molStandardizeSmallTest
135/158 Test #138: molStandardizeSmallTest ................   Passed    0.66 sec
        Start 139: molFragmentTest
136/158 Test #139: molFragmentTest ........................   Passed    0.79 sec
        Start 140: molStandardizeCatchTest
137/158 Test #140: molStandardizeCatchTest ................   Passed    0.67 sec
        Start 141: pyMolStandardize
138/158 Test #141: pyMolStandardize .......................***Exception: SegFault  2.26 sec

        Start 142: testQuery
139/158 Test #142: testQuery ..............................   Passed    0.06 sec
        Start 143: testMatCalc
140/158 Test #143: testMatCalc ............................   Passed    0.03 sec
        Start 144: pyMatCalc
141/158 Test #144: pyMatCalc ..............................   Passed    6.19 sec
        Start 145: testSimDivPickers
142/158 Test #145: testSimDivPickers ......................   Passed    0.16 sec
        Start 146: pickersTestsCatch
143/158 Test #146: pickersTestsCatch ......................   Passed    0.78 sec
        Start 147: pySimDivPickers
144/158 Test #147: pySimDivPickers ........................   Passed   15.05 sec
        Start 148: pyRanker
145/158 Test #148: pyRanker ...............................   Passed    4.29 sec
        Start 149: testChemicalFeatures
146/158 Test #149: testChemicalFeatures ...................   Passed    0.06 sec
        Start 150: pyFeatures
147/158 Test #150: pyFeatures .............................***Exception: SegFault  2.07 sec

        Start 151: pythonTestDbCLI
148/158 Test #151: pythonTestDbCLI ........................***Failed   19.62 sec
FFFFFFFFFFFF
======================================================================
FAIL: test1Create (__main__.TestCase)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "TestDbCLI.py", line 18, in test1Create
    self.assertFalse(res)
AssertionError: -11 is not false

======================================================================
FAIL: test2_1SearchFPs (__main__.TestCase)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "TestDbCLI.py", line 70, in test2_1SearchFPs
    self.assertTrue(os.path.exists('testData/bzr/Compounds.sqlt'))
AssertionError: False is not true

======================================================================
FAIL: test2_2SearchAtomPairs (__main__.TestCase)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "TestDbCLI.py", line 102, in test2_2SearchAtomPairs
    self.assertTrue(os.path.exists('testData/bzr/Compounds.sqlt'))
AssertionError: False is not true

======================================================================
FAIL: test2_3SearchTorsions (__main__.TestCase)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "TestDbCLI.py", line 135, in test2_3SearchTorsions
    self.assertTrue(os.path.exists('testData/bzr/Compounds.sqlt'))
AssertionError: False is not true

======================================================================
FAIL: test2_4SearchProps (__main__.TestCase)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "TestDbCLI.py", line 167, in test2_4SearchProps
    self.assertTrue(os.path.exists('testData/bzr/Compounds.sqlt'))
AssertionError: False is not true

======================================================================
FAIL: test2_5SearchSmarts (__main__.TestCase)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "TestDbCLI.py", line 206, in test2_5SearchSmarts
    self.assertFalse(res)
AssertionError: -11 is not false

======================================================================
FAIL: test2_6SearchBoth (__main__.TestCase)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "TestDbCLI.py", line 264, in test2_6SearchBoth
    self.assertFalse(res)
AssertionError: -11 is not false

======================================================================
FAIL: test2_7SearchGobbi (__main__.TestCase)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "TestDbCLI.py", line 288, in test2_7SearchGobbi
    self.assertTrue(os.path.exists('testData/bzr/Compounds.sqlt'))
AssertionError: False is not true

======================================================================
FAIL: test2_8SearchThresh (__main__.TestCase)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "TestDbCLI.py", line 323, in test2_8SearchThresh
    self.assertTrue(os.path.exists('testData/bzr/Compounds.sqlt'))
AssertionError: False is not true

======================================================================
FAIL: test4CreateOptions (__main__.TestCase)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "TestDbCLI.py", line 360, in test4CreateOptions
    self.assertFalse(res)
AssertionError: -11 is not false

======================================================================
FAIL: test5TestBackwardsCompat (__main__.TestCase)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "TestDbCLI.py", line 482, in test5TestBackwardsCompat
    self.assertFalse(res)
AssertionError: -11 is not false

======================================================================
FAIL: test6Update (__main__.TestCase)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "TestDbCLI.py", line 518, in test6Update
    self.assertFalse(res)
AssertionError: -11 is not false

----------------------------------------------------------------------
Ran 12 tests in 17.859s

FAILED (failures=12)
!!! TEST FAILURE:  python TestDbCLI.py {'dir': 'DbCLI'}

        Start 152: pythonTestDirML
149/158 Test  #26: graphmolTest1 ..........................   Passed  663.03 sec
        Start 153: pythonTestDirDataStructs
150/158 Test #153: pythonTestDirDataStructs ...............***Failed   16.93 sec
..............UnitTestcBitVect.py:42: DeprecationWarning: Please use assertRaisesRegex instead.
  with self.assertRaisesRegexp(IndexError, ""):
....................
----------------------------------------------------------------------
Ran 34 tests in 0.096s

OK
.....
----------------------------------------------------------------------
Ran 5 tests in 1.865s

OK
.......
----------------------------------------------------------------------
Ran 7 tests in 0.035s

OK
!!! TEST FAILURE:  python UnitTestDocTests.py {}

        Start 154: pythonTestDirDbase
151/158 Test #154: pythonTestDirDbase .....................   Passed   18.36 sec
        Start 155: pythonTestDirSimDivFilters
152/158 Test #155: pythonTestDirSimDivFilters .............***Failed    4.68 sec
!!! TEST FAILURE:  python SimilarityPickers.py {}

        Start 156: pythonTestDirVLib
153/158 Test #156: pythonTestDirVLib ......................***Failed    7.59 sec
.............
----------------------------------------------------------------------
Ran 13 tests in 0.151s

OK
!!! TEST FAILURE:  python UnitTestNodeLib.py {}
!!! TEST FAILURE:  python test_list.py {'dir': 'NodeLib'}

        Start 157: pythonTestDirChem
154/158 Test #157: pythonTestDirChem ......................***Exception: SegFault  3.75 sec

        Start 158: pythonTestSping
155/158 Test #158: pythonTestSping ........................***Exception: SegFault  3.69 sec

156/158 Test  #94: testMolAlign ...........................   Passed  329.56 sec
157/158 Test #152: pythonTestDirML ........................***Failed  149.29 sec
.......
----------------------------------------------------------------------
Ran 7 tests in 6.174s

OK
............
----------------------------------------------------------------------
Ran 12 tests in 1.249s

OK
.
----------------------------------------------------------------------
Ran 1 test in 0.371s

OK
...
----------------------------------------------------------------------
Ran 3 tests in 0.015s

OK
........
----------------------------------------------------------------------
Ran 8 tests in 0.008s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 1.868s

OK
.....
----------------------------------------------------------------------
Ran 5 tests in 0.019s

OK
.........
----------------------------------------------------------------------
Ran 9 tests in 0.038s

OK
............
----------------------------------------------------------------------
Ran 12 tests in 0.029s

OK
.....
----------------------------------------------------------------------
Ran 5 tests in 0.314s

OK
.
----------------------------------------------------------------------
Ran 1 test in 0.002s

OK
......
----------------------------------------------------------------------
Ran 6 tests in 0.043s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 3.271s

OK
......
----------------------------------------------------------------------
Ran 6 tests in 0.290s

OK
..
----------------------------------------------------------------------
Ran 2 tests in 2.395s

OK
..........
----------------------------------------------------------------------
Ran 10 tests in 0.237s

OK
.....
----------------------------------------------------------------------
Ran 5 tests in 1.002s

OK
..
----------------------------------------------------------------------
Ran 2 tests in 0.061s

OK
...
----------------------------------------------------------------------
Ran 3 tests in 0.179s

OK
!!! TEST FAILURE:  python UnitTestMolDescriptors.py {}
...
----------------------------------------------------------------------
Ran 3 tests in 5.499s

OK
......
----------------------------------------------------------------------
Ran 6 tests in 3.724s

OK
!!! TEST FAILURE:  python UnitTestPackage.py {}
....
----------------------------------------------------------------------
Ran 4 tests in 0.092s

OK
.....
----------------------------------------------------------------------
Ran 5 tests in 29.227s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 0.012s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 0.005s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 0.032s

OK
!!! TEST FAILURE:  python test_list.py {'dir': 'Descriptors'}
!!! TEST FAILURE:  python test_list.py {'dir': 'ModelPackage'}

158/158 Test  #92: testDistGeomHelpers ....................   Passed  526.00 sec

72% tests passed, 44 tests failed out of 158

Total Test time (real) = 934.80 sec

The following tests FAILED:
	  2 - pyCoordGen (SEGFAULT)
	 23 - pyForceFieldConstraints (SEGFAULT)
	 43 - pyDepictor (SEGFAULT)
	 64 - pyChemReactions (SEGFAULT)
	 65 - pyChemReactionEnumerations (SEGFAULT)
	 66 - pyChemReactionSanitize (SEGFAULT)
	 72 - pyFilterCatalog (SEGFAULT)
	 74 - pyFragCatalog (SEGFAULT)
	 77 - pyMolDescriptors (SEGFAULT)
	 78 - pyMolDescriptors3D (SEGFAULT)
	 82 - pyTestGenerator (SEGFAULT)
	 84 - pyPartialCharges (SEGFAULT)
	 86 - pyMolTransforms (SEGFAULT)
	 91 - pyForceFieldHelpers (SEGFAULT)
	 93 - pyDistGeomHelpers (SEGFAULT)
	 95 - pyMolAlign (SEGFAULT)
	 97 - pyChemicalFeatures (SEGFAULT)
	 99 - pyShapeHelpers (SEGFAULT)
	101 - pyMolCatalog (SEGFAULT)
	105 - pyMolDraw2D (SEGFAULT)
	107 - pyFMCS (SEGFAULT)
	111 - pyMolHash (SEGFAULT)
	113 - pyMMPA (SEGFAULT)
	115 - pyStructChecker (SEGFAULT)
	117 - pyReducedGraphs (SEGFAULT)
	120 - pySubstructLibrary (SEGFAULT)
	122 - pyRGroupDecomposition (SEGFAULT)
	124 - pyMolInterchange (SEGFAULT)
	126 - pySLNParse (SEGFAULT)
	127 - pyGraphMolWrap (SEGFAULT)
	128 - pyTestConformerWrap (SEGFAULT)
	129 - pyTestTrajectory (SEGFAULT)
	130 - pyTestSGroups (SEGFAULT)
	131 - pyTestThreads (SEGFAULT)
	132 - pyTestPropertyLists (SEGFAULT)
	141 - pyMolStandardize (SEGFAULT)
	150 - pyFeatures (SEGFAULT)
	151 - pythonTestDbCLI (Failed)
	152 - pythonTestDirML (Failed)
	153 - pythonTestDirDataStructs (Failed)
	155 - pythonTestDirSimDivFilters (Failed)
	156 - pythonTestDirVLib (Failed)
	157 - pythonTestDirChem (SEGFAULT)
	158 - pythonTestSping (SEGFAULT)
Errors while running CTest
make[2]: *** [Makefile:109: test] Error 8
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
dh_auto_test: error: cd obj-arm-linux-gnueabihf && make -j4 test ARGS\+=-j4 returned exit code 2
make[1]: [debian/rules:124: override_dh_auto_test] Error 25 (ignored)
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
 fakeroot debian/rules binary-arch
dh binary-arch --with python3 --buildsystem=cmake --parallel
   dh_testroot -a -O--buildsystem=cmake -O--parallel
   dh_prep -a -O--buildsystem=cmake -O--parallel
   debian/rules override_dh_auto_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_auto_install
	cd obj-arm-linux-gnueabihf && make -j4 install DESTDIR=/<<PKGBUILDDIR>>/debian/tmp AM_UPDATE_INFO_DIR=no
make[2]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cmake -S/<<PKGBUILDDIR>> -B/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles/progress.marks
make -f CMakeFiles/Makefile2 all
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f External/catch/CMakeFiles/catch.dir/build.make External/catch/CMakeFiles/catch.dir/depend
make -f External/INCHI-API/CMakeFiles/inchi_support.dir/build.make External/INCHI-API/CMakeFiles/inchi_support.dir/depend
make -f External/CoordGen/CMakeFiles/coordgen_support.dir/build.make External/CoordGen/CMakeFiles/coordgen_support.dir/depend
make -f External/RingFamilies/CMakeFiles/ringdecomposerlib_support.dir/build.make External/RingFamilies/CMakeFiles/ringdecomposerlib_support.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/External/catch /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/catch /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/catch/CMakeFiles/catch.dir/DependInfo.cmake --color=
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/External/INCHI-API /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/INCHI-API /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/INCHI-API/CMakeFiles/inchi_support.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/External/RingFamilies /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/RingFamilies /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/RingFamilies/CMakeFiles/ringdecomposerlib_support.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/External/CoordGen /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/CMakeFiles/coordgen_support.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f External/catch/CMakeFiles/catch.dir/build.make External/catch/CMakeFiles/catch.dir/build
make -f External/INCHI-API/CMakeFiles/inchi_support.dir/build.make External/INCHI-API/CMakeFiles/inchi_support.dir/build
make -f External/RingFamilies/CMakeFiles/ringdecomposerlib_support.dir/build.make External/RingFamilies/CMakeFiles/ringdecomposerlib_support.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f External/CoordGen/CMakeFiles/coordgen_support.dir/build.make External/CoordGen/CMakeFiles/coordgen_support.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/INCHI-API && /usr/bin/cmake -E copy /<<PKGBUILDDIR>>/External/INCHI-API/python/noinchi.py /<<PKGBUILDDIR>>/rdkit/Chem/inchi.py
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'External/RingFamilies/CMakeFiles/ringdecomposerlib_support.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'External/catch/CMakeFiles/catch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'External/CoordGen/CMakeFiles/coordgen_support.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  0%] Built target catch
[  0%] Built target ringdecomposerlib_support
[  0%] Built target coordgen_support
make -f Code/RDGeneral/CMakeFiles/RDGeneral.dir/build.make Code/RDGeneral/CMakeFiles/RDGeneral.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/RDStreams/CMakeFiles/RDStreams.dir/build.make Code/RDStreams/CMakeFiles/RDStreams.dir/depend
make -f Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/build.make Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDStreams /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDStreams /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDStreams/CMakeFiles/RDStreams.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ML/Cluster/Murtagh /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/RDGeneral.dir/DependInfo.cmake --color=
[  0%] Built target inchi_support
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/RDStreams/CMakeFiles/RDStreams.dir/build.make Code/RDStreams/CMakeFiles/RDStreams.dir/build
make -f Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/build.make Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/RDStreams/CMakeFiles/RDStreams.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/RDGeneral/CMakeFiles/RDGeneral.dir/build.make Code/RDGeneral/CMakeFiles/RDGeneral.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/RDGeneral/CMakeFiles/RDGeneral.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  2%] Built target RDStreams
[  2%] Built target hc
[  3%] Built target RDGeneral
make -f Code/DataStructs/CMakeFiles/DataStructs.dir/build.make Code/DataStructs/CMakeFiles/DataStructs.dir/depend
make -f Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/build.make Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/depend
make -f Code/RDBoost/CMakeFiles/RDBoost.dir/build.make Code/RDBoost/CMakeFiles/RDBoost.dir/depend
make -f Code/RDGeneral/CMakeFiles/testRDValue.dir/build.make Code/RDGeneral/CMakeFiles/testRDValue.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDBoost /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost/CMakeFiles/RDBoost.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/EigenSolvers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/testRDValue.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/DataStructs.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/RDBoost/CMakeFiles/RDBoost.dir/build.make Code/RDBoost/CMakeFiles/RDBoost.dir/build
make -f Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/build.make Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/RDGeneral/CMakeFiles/testRDValue.dir/build.make Code/RDGeneral/CMakeFiles/testRDValue.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/RDBoost/CMakeFiles/RDBoost.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/RDGeneral/CMakeFiles/testRDValue.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/DataStructs/CMakeFiles/DataStructs.dir/build.make Code/DataStructs/CMakeFiles/DataStructs.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/DataStructs/CMakeFiles/DataStructs.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  3%] Built target testRDValue
[  3%] Built target RDBoost
[  3%] Built target EigenSolvers
make -f Code/RDGeneral/CMakeFiles/testDict.dir/build.make Code/RDGeneral/CMakeFiles/testDict.dir/depend
make -f Code/Numerics/CMakeFiles/testMatrices.dir/build.make Code/Numerics/CMakeFiles/testMatrices.dir/depend
make -f Code/Catalogs/CMakeFiles/Catalogs.dir/build.make Code/Catalogs/CMakeFiles/Catalogs.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/testDict.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/CMakeFiles/testMatrices.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Catalogs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Catalogs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Catalogs/CMakeFiles/Catalogs.dir/DependInfo.cmake --color=
[  5%] Built target DataStructs
make -f Code/Query/CMakeFiles/testQuery.dir/build.make Code/Query/CMakeFiles/testQuery.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Query /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Query /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Query/CMakeFiles/testQuery.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/RDGeneral/CMakeFiles/testDict.dir/build.make Code/RDGeneral/CMakeFiles/testDict.dir/build
make -f Code/Numerics/CMakeFiles/testMatrices.dir/build.make Code/Numerics/CMakeFiles/testMatrices.dir/build
make -f Code/Catalogs/CMakeFiles/Catalogs.dir/build.make Code/Catalogs/CMakeFiles/Catalogs.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Numerics/CMakeFiles/testMatrices.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Catalogs/CMakeFiles/Catalogs.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/RDGeneral/CMakeFiles/testDict.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Query/CMakeFiles/testQuery.dir/build.make Code/Query/CMakeFiles/testQuery.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Query/CMakeFiles/testQuery.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  5%] Built target testMatrices
make -f Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/build.make Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataManip/MetricMatrixCalc /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/DependInfo.cmake --color=
[  5%] Built target Catalogs
make -f Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/build.make Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/depend
[  6%] Built target testQuery
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataManip/MetricMatrixCalc/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/DependInfo.cmake --color=
make -f Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/DependInfo.cmake --color=
[  7%] Built target testDict
make -f Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/build.make Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ML/Cluster/Murtagh /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/build.make Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/build
[  8%] Built target testMatCalc
make -f Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build.make Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/build.make Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ML/InfoTheory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/build.make Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  9%] Built target SimDivPickers
make -f Code/Geometry/CMakeFiles/RDGeometryLib.dir/build.make Code/Geometry/CMakeFiles/RDGeometryLib.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/RDGeometryLib.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build.make Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build
[  9%] Built target rdMetricMatrixCalc
make -f Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/build.make Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[  9%] Built target Clustering
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/RDBoost/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/DependInfo.cmake --color=
make -f Code/DataStructs/CMakeFiles/testFPB.dir/build.make Code/DataStructs/CMakeFiles/testFPB.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/testFPB.dir/DependInfo.cmake --color=
[  9%] Built target InfoTheory
make -f Code/DataStructs/CMakeFiles/testDataStructs.dir/build.make Code/DataStructs/CMakeFiles/testDataStructs.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Geometry/CMakeFiles/RDGeometryLib.dir/build.make Code/Geometry/CMakeFiles/RDGeometryLib.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/testDataStructs.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/build.make Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/DataStructs/CMakeFiles/testFPB.dir/build.make Code/DataStructs/CMakeFiles/testFPB.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Geometry/CMakeFiles/RDGeometryLib.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/DataStructs/CMakeFiles/testFPB.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/DataStructs/CMakeFiles/testDataStructs.dir/build.make Code/DataStructs/CMakeFiles/testDataStructs.dir/build
[ 10%] Built target RDGeometryLib
[ 10%] Built target rdBase
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/DataStructs/CMakeFiles/testDataStructs.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/DataStructs/CMakeFiles/testMultiFPB.dir/build.make Code/DataStructs/CMakeFiles/testMultiFPB.dir/depend
[ 11%] Built target testFPB
make -f Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/build.make Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/depend
make -f Code/Geometry/CMakeFiles/geometryTestsCatch.dir/build.make Code/Geometry/CMakeFiles/geometryTestsCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/testMultiFPB.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/geometryTestsCatch.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DataStructs/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/DependInfo.cmake --color=
[ 11%] Built target testDataStructs
make -f Code/Geometry/CMakeFiles/testGrid.dir/build.make Code/Geometry/CMakeFiles/testGrid.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/testGrid.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/DataStructs/CMakeFiles/testMultiFPB.dir/build.make Code/DataStructs/CMakeFiles/testMultiFPB.dir/build
make -f Code/Geometry/CMakeFiles/geometryTestsCatch.dir/build.make Code/Geometry/CMakeFiles/geometryTestsCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/DataStructs/CMakeFiles/testMultiFPB.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Geometry/CMakeFiles/geometryTestsCatch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/build.make Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Geometry/CMakeFiles/testGrid.dir/build.make Code/Geometry/CMakeFiles/testGrid.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Geometry/CMakeFiles/testGrid.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 12%] Built target geometryTestsCatch
[ 12%] Built target testMultiFPB
make -f Code/Geometry/CMakeFiles/testTransforms.dir/build.make Code/Geometry/CMakeFiles/testTransforms.dir/depend
make -f Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build.make Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/testTransforms.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Geometry/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/DependInfo.cmake --color=
[ 13%] Built target cDataStructs
[ 13%] Built target testGrid
make -f Code/Numerics/CMakeFiles/testConrec.dir/build.make Code/Numerics/CMakeFiles/testConrec.dir/depend
make -f Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/build.make Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/CMakeFiles/testConrec.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Geometry/CMakeFiles/testTransforms.dir/build.make Code/Geometry/CMakeFiles/testTransforms.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build.make Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Geometry/CMakeFiles/testTransforms.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/build.make Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Numerics/CMakeFiles/testConrec.dir/build.make Code/Numerics/CMakeFiles/testConrec.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/SimDivPickers/CMakeFiles/pickersTestsCatch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Numerics/CMakeFiles/testConrec.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 14%] Built target testTransforms
make -f Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/DependInfo.cmake --color=
[ 15%] Built target rdGeometry
make -f Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build.make Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/depend
[ 15%] Built target pickersTestsCatch
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/SimDivPickers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/DependInfo.cmake --color=
make -f Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build.make Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/depend
[ 15%] Built target testConrec
make -f Code/ML/Data/CMakeFiles/cQuantize.dir/build.make Code/ML/Data/CMakeFiles/cQuantize.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ML/InfoTheory/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ML/Data /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Data /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ML/Data/CMakeFiles/cQuantize.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 16%] Built target testSimDivPickers
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/depend
make -f Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build.make Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build.make Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ML/Data/CMakeFiles/cQuantize.dir/build.make Code/ML/Data/CMakeFiles/cQuantize.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/ML/Data/CMakeFiles/cQuantize.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 16%] Built target rdInfoTheory
make -f Code/GraphMol/CMakeFiles/GraphMol.dir/build.make Code/GraphMol/CMakeFiles/GraphMol.dir/depend
[ 16%] Built target cQuantize
make -f Code/Numerics/Alignment/CMakeFiles/Alignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/Alignment.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/Alignment /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/CMakeFiles/Alignment.dir/DependInfo.cmake --color=
[ 17%] Built target rdSimDivPickers
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/GraphMol.dir/DependInfo.cmake --color=
[ 18%] Built target ChemicalFeatures
make -f Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Numerics/Alignment/CMakeFiles/Alignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/Alignment.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Numerics/Alignment/CMakeFiles/Alignment.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/GraphMol.dir/build.make Code/GraphMol/CMakeFiles/GraphMol.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 18%] Built target Alignment
make -f Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/depend
make -f Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build.make Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/Alignment /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/Alignment/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/GraphMol.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 19%] Built target testChemicalFeatures
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build
[ 24%] Built target GraphMol
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/depend
make -f Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build.make Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 24%] Built target testAlignment
make -f Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/build
[ 25%] Built target rdAlignment
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build
[ 26%] Built target Trajectory
make -f Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 28%] Built target SmilesParse
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/build
make -f Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build
[ 28%] Built target SubstructMatch
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 28%] Built target MolTransforms
make -f Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/depend
make -f Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/DependInfo.cmake --color=
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 29%] Built target Subgraphs
make -f Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/DependInfo.cmake --color=
[ 30%] Built target PartialCharges
make -f Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 31%] Built target MolCatalog
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/build
make -f Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/depend
[ 31%] Built target ReducedGraphs
make -f Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 31%] Built target MolInterchange
make -f Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build.make Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ChemicalFeatures/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build
[ 32%] Built target SLNParse
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build
make -f Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/Optimizer /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build.make Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 32%] Built target rdqueries
[ 33%] Built target rdtrajectory
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build
make -f Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/depend
make -f Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 34%] Built target rdChemicalFeatures
make -f Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolcpTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolcpTest.dir/DependInfo.cmake --color=
[ 34%] Built target Optimizer
make -f Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/build
make -f Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolSGroupCatch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 34%] Built target graphmolSGroupCatch
[ 34%] Built target graphmolqueryTest
make -f Code/GraphMol/CMakeFiles/test-valgrind.dir/build.make Code/GraphMol/CMakeFiles/test-valgrind.dir/depend
make -f Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolIterTest.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/test-valgrind.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolIterTest.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Built target graphmolcpTest
make -f Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/test-valgrind.dir/build.make Code/GraphMol/CMakeFiles/test-valgrind.dir/build
[ 35%] Built target graphmolMemTest1
make -f Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/test-valgrind.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Built target graphmolIterTest
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/depend
[ 35%] Built target test-valgrind
make -f Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 35%] Built target ChemTransforms
make -f Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/depend
[ 36%] Built target smaTest1
make -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 36%] Built target smiTest2
make -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/depend
[ 37%] Built target FilterCatalog
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/DependInfo.cmake --color=
make -f Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/DependInfo.cmake --color=
[ 38%] Built target testSubgraphs2
make -f Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/build
[ 40%] Built target Fingerprints
make -f Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build.make Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/PartialCharges/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/build
[ 40%] Built target testSubgraphs1
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build.make Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build.make Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/DependInfo.cmake --color=
[ 41%] Built target FragCatalog
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build'.
make -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/DependInfo.cmake --color=
[ 41%] Built target testPartialCharges
make -f Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/DependInfo.cmake --color=
[ 41%] Built target rdPartialCharges
make -f Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build.make Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 41%] Built target MolChemicalFeatures
make -f Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/depend
[ 41%] Built target rdMolTransforms
make -f Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ReducedGraphs/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/DependInfo.cmake --color=
[ 41%] Built target ShapeHelpers
make -f Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/build.make Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/depend
[ 41%] Built target testReducedGraphs
make -f Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/build.make Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 41%] Built target rdReducedGraphs
make -f Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/build.make Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SLNParse/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/DependInfo.cmake --color=
[ 42%] Built target rdMolInterchange
[ 42%] Built target testSLNParse
make -f Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/depend
make -f Code/ForceField/CMakeFiles/ForceField.dir/build.make Code/ForceField/CMakeFiles/ForceField.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ForceField /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/CMakeFiles/ForceField.dir/DependInfo.cmake --color=
[ 42%] Built target SubstructLibrary
make -f Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/Numerics/Optimizer /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/build.make Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ForceField/CMakeFiles/ForceField.dir/build.make Code/ForceField/CMakeFiles/ForceField.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 42%] Built target rdSLNParse
make -f Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build.make Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/ForceField/CMakeFiles/ForceField.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 43%] Built target testOptimizer
make -f Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/DependInfo.cmake --color=
[ 46%] Built target ForceField
make -f Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/depend
[ 48%] Built target rdchem
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build.make Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build
make -f Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build
[ 48%] Built target rdFingerprintGenerator
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 48%] Built target rdMolChemicalFeatures
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 48%] Built target rdShapeHelpers
[ 49%] Built target ForceFieldHelpers
make -f Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/depend
make -f Code/DistGeom/CMakeFiles/DistGeometry.dir/build.make Code/DistGeom/CMakeFiles/DistGeometry.dir/depend
make -f Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build.make Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/depend
make -f Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ForceField/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DistGeom /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/CMakeFiles/DistGeometry.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build.make Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build
make -f Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/DistGeom/CMakeFiles/DistGeometry.dir/build.make Code/DistGeom/CMakeFiles/DistGeometry.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/DistGeom/CMakeFiles/DistGeometry.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 50%] Built target rdForceField
[ 50%] Built target MolAlign
make -f Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/depend
make -f External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/build.make External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/depend
[ 50%] Built target rdForceFieldHelpers
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/External/CoordGen/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/DependInfo.cmake --color=
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Depictor /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/DependInfo.cmake --color=
[ 51%] Built target DistGeometry
make -f Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/depend
make -f Code/DistGeom/CMakeFiles/testDistGeom.dir/build.make Code/DistGeom/CMakeFiles/testDistGeom.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DistGeom /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/CMakeFiles/testDistGeom.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/build.make External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/DistGeom/CMakeFiles/testDistGeom.dir/build.make Code/DistGeom/CMakeFiles/testDistGeom.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'External/CoordGen/Wrap/CMakeFiles/rdCoordGen.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/DistGeom/CMakeFiles/testDistGeom.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 51%] Built target Depictor
make -f Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build.make Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/depend
[ 52%] Built target rdCoordGen
[ 52%] Built target DistGeomHelpers
[ 52%] Built target testDistGeom
make -f Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/DistGeom/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build.make Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 52%] Built target DistGeom
[ 56%] Built target FileParsers
make -f External/CoordGen/CMakeFiles/testCoordGen.dir/build.make External/CoordGen/CMakeFiles/testCoordGen.dir/depend
make -f Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build.make Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/depend
make -f Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/build.make Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/depend
make -f Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/External/CoordGen /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/External/CoordGen/CMakeFiles/testCoordGen.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ForceField/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/DependInfo.cmake --color=
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/ForceField/UFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/UFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f External/CoordGen/CMakeFiles/testCoordGen.dir/build.make External/CoordGen/CMakeFiles/testCoordGen.dir/build
make -f Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build.make Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build
make -f Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/build.make Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'External/CoordGen/CMakeFiles/testCoordGen.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 56%] Built target testUFFForceField
[ 56%] Built target testCoordGen
[ 56%] Built target testMMFFForceField
make -f Code/GraphMol/CMakeFiles/graphmolTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolTest1.dir/depend
make -f Code/GraphMol/CMakeFiles/hanoiTest.dir/build.make Code/GraphMol/CMakeFiles/hanoiTest.dir/depend
make -f Code/GraphMol/CMakeFiles/testSGroup.dir/build.make Code/GraphMol/CMakeFiles/testSGroup.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolTest1.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/hanoiTest.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/testSGroup.dir/DependInfo.cmake --color=
[ 56%] Built target graphmolTestsCatch
make -f Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolTest1.dir/build
make -f Code/GraphMol/CMakeFiles/hanoiTest.dir/build.make Code/GraphMol/CMakeFiles/hanoiTest.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/testSGroup.dir/build.make Code/GraphMol/CMakeFiles/testSGroup.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolTest1.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/hanoiTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/testSGroup.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 56%] Built target graphmolTest1
make -f Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/depend
[ 56%] Built target graphmoltestPicklerGlobalSetting
[ 57%] Built target testSGroup
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/DependInfo.cmake --color=
make -f Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/depend
make -f Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/DependInfo.cmake --color=
[ 57%] Built target hanoiTest
make -f Code/GraphMol/CMakeFiles/molBundleTest.dir/build.make Code/GraphMol/CMakeFiles/molBundleTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/molBundleTest.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/build
make -f Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/molBundleTest.dir/build.make Code/GraphMol/CMakeFiles/molBundleTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/molBundleTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 58%] Built target graphmoltestPickler
[ 59%] Built target graphmoltestChirality
[ 59%] Built target graphmolMolOpsTest
make -f Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/build.make Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/depend
make -f Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/depend
make -f Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build.make Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Depictor /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Depictor/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/DependInfo.cmake --color=
[ 59%] Built target molBundleTest
make -f Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/build.make Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build.make Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 59%] Built target resMolSupplierTest
[ 59%] Built target testDepictor
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/depend
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/DependInfo.cmake --color=
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/DependInfo.cmake --color=
[ 59%] Built target cxsmilesTest
make -f Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/DependInfo.cmake --color=
[ 60%] Built target rdDepictor
make -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 60%] Built target smiTest1
make -f Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/depend
[ 60%] Built target smiTestCatch
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/DependInfo.cmake --color=
make -f Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/DependInfo.cmake --color=
[ 60%] Built target testMol2ToMol
make -f Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/DependInfo.cmake --color=
[ 61%] Built target fileParsersTest1
make -f Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/testPropertyLists.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 61%] Built target testPropertyLists
make -f Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/DependInfo.cmake --color=
[ 61%] Built target testMolWriter
make -f Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/DependInfo.cmake --color=
[ 62%] Built target testMolSupplier
make -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/depend
[ 62%] Built target testTplParser
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/DependInfo.cmake --color=
make -f Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Built target testSequence
make -f Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Substruct/CMakeFiles/substructTestCatch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 62%] Built target testExtendedStereoParsing
make -f Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/depend
[ 62%] Built target fileParsersCatchTest
make -f Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/DependInfo.cmake --color=
[ 62%] Built target substructTestCatch
make -f Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/build
[ 62%] Built target testSubstructMatch
make -f Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ChemTransforms/CMakeFiles/chemTransformsTestCatch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 63%] Built target chemTransformsTestCatch
make -f Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build.make Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FilterCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build
[ 63%] Built target testChemTransforms
make -f Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/DependInfo.cmake --color=
[ 65%] Built target Descriptors
make -f Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build.make Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FragCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build.make Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build
[ 65%] Built target filterCatalogTest
make -f Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build.make Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build
[ 66%] Built target rdfiltercatalog
make -f Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 66%] Built target testFragCatalog
make -f Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build.make Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Descriptors/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/DependInfo.cmake --color=
[ 67%] Built target rdfragcatalog
make -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/DependInfo.cmake --color=
[ 68%] Built target testAUTOCORR2D
make -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build.make Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 68%] Built target testDescriptors
make -f Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/DependInfo.cmake --color=
[ 69%] Built target rdMolDescriptors
make -f Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/DependInfo.cmake --color=
[ 70%] Built target testFingerprints
[ 70%] Built target testFingerprintGenerators
make -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/depend
make -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/DependInfo.cmake --color=
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Fingerprints/CMakeFiles/fpTestCatch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/build
[ 70%] Built target fpTestCatch
make -f Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/UFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpersMultiThread.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 70%] Built target testMolTransforms
make -f Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build.make Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ForceFieldHelpers/CrystalFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/DependInfo.cmake --color=
[ 71%] Built target testMMFFForceFieldHelpersMultiThread
[ 71%] Built target testMMFFForceFieldHelpers
make -f Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/depend
make -f Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build.make Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/DistGeomHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build.make Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build
[ 71%] Built target testUFFForceFieldHelpers
make -f Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build.make Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 72%] Built target testCrystalForceField
make -f Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build.make Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolAlign/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 72%] Built target testDistGeomHelpers
make -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build
[ 72%] Built target rdDistGeom
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build'.
make -f Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ShapeHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build.make Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 73%] Built target testMolAlign
make -f Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 73%] Built target rdMolAlign
make -f Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build.make Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/DependInfo.cmake --color=
[ 73%] Built target testFeatures
make -f Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FMCS /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build
[ 73%] Built target testShapeHelpers
make -f Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolHash /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build.make Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build
[ 73%] Built target testMolCatalog
make -f Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MMPA /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 74%] Built target rdMolCatalog
make -f Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/build.make Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/DependInfo.cmake --color=
[ 75%] Built target FMCS
[ 76%] Built target MolHash
make -f Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/depend
make -f Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Trajectory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/build.make Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/build
[ 77%] Built target MMPA
make -f Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/SubstructLibrary/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build
[ 78%] Built target StructChecker
make -f Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/depend
[ 79%] Built target trajectoryTest
make -f Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/DependInfo.cmake --color=
[ 80%] Built target substructLibraryTest
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolInterchange /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/DependInfo.cmake --color=
[ 80%] Built target rdSubstructLibrary
make -f Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build
[ 80%] Built target RGroupDecomposition
make -f Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 80%] Built target molInterchangeTest1
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FMCS /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/DependInfo.cmake --color=
make -f Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build.make Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/DependInfo.cmake --color=
[ 81%] Built target rdmolfiles
make -f Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/build.make Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/FMCS/Test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build.make Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/build.make Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/build
[ 84%] Built target ChemReactions
make -f Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/build.make Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolHash /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 84%] Built target testFMCS
make -f Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolHash /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/DependInfo.cmake --color=
[ 84%] Built target rdFMCS
make -f Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build.make Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolHash/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/DependInfo.cmake --color=
[ 84%] Built target FMCStest
make -f Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MMPA /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/build.make Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build.make Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolHash/CMakeFiles/molHashCatchTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 84%] Built target molHashCatchTest
make -f Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build.make Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MMPA/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/DependInfo.cmake --color=
[ 84%] Built target testMolHash
make -f Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/build.make Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/DependInfo.cmake --color=
[ 84%] Built target rdMolHash
[ 84%] Built target testMMPA
make -f Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/build.make Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/depend
make -f Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/StructChecker/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build.make Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/build.make Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/build.make Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 85%] Built target rdMMPA
make -f Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/RGroupDecomposition/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/DependInfo.cmake --color=
[ 86%] Built target testStructChecker
[ 86%] Built target rdStructChecker
make -f Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/depend
make -f Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/depend
[ 86%] Built target testRGroupDecomp
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/DependInfo.cmake --color=
make -f Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 87%] Built target rdRGroupDecomposition
make -f Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/DependInfo.cmake --color=
[ 88%] Built target testReaction
make -f Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/DependInfo.cmake --color=
[ 88%] Built target testReactionFingerprints
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build.make Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/ChemReactions/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build
[ 92%] Built target MolStandardize
make -f Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build.make Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 92%] Built target rxnTestCatch
make -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/depend
[ 93%] Built target testEnumeration
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/DependInfo.cmake --color=
make -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build
[ 93%] Built target rdChemReactions
make -f Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/build
[ 94%] Built target MolDraw2D
make -f Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 95%] Built target molStandardizeTest
make -f Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/depend
[ 95%] Built target molValidateTest
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/DependInfo.cmake --color=
make -f Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/depend
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/DependInfo.cmake --color=
[ 95%] Built target molStandardizeSmallTest
make -f Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/build
[ 96%] Built target molNormalizeTest
make -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 96%] Built target molChargeTest
make -f Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/build.make Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/depend
[ 96%] Built target molTautomerTest
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolStandardize/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/DependInfo.cmake --color=
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/DependInfo.cmake --color=
[ 97%] Built target molFragmentTest
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeCatchTest.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/build.make Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/build
[ 97%] Built target molStandardizeCatchTest
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTestCatch.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build
[ 98%] Built target rdMolStandardize
make -f Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/depend
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/MolDraw2D/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 98%] Built target moldraw2DRxnTest1
make -f Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/depend
[ 98%] Built target moldraw2DTestCatch
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
cd /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<PKGBUILDDIR>> /<<PKGBUILDDIR>>/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/DependInfo.cmake --color=
[ 99%] Built target moldraw2DTest1
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build
make[4]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[4]: Nothing to be done for 'Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build'.
make[4]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
[ 99%] Built target rdMolDraw2D
[100%] Built target rdmolops
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_start /<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf/CMakeFiles 0
make -f CMakeFiles/Makefile2 preinstall
make[3]: Entering directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'preinstall'.
make[3]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "None"
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/cmake/rdkit/rdkit-targets.cmake
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/cmake/rdkit/rdkit-targets-none.cmake
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/cmake/rdkit/rdkit-config.cmake
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/cmake/rdkit/rdkit-config-version.cmake
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Avalon
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Avalon/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/AllChem.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/AtomPairs
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/AtomPairs/Pairs.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/AtomPairs/Sheridan.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/AtomPairs/Torsions.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/AtomPairs/Utils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/AtomPairs/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/BRICS.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/BuildFragmentCatalog.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/ChemUtils
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/ChemUtils/AlignDepict.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/ChemUtils/BulkTester.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/ChemUtils/DescriptorUtilities.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/ChemUtils/SDFToCSV.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/ChemUtils/TemplateExpand.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/ChemUtils/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/ChemicalFeatures.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/ChemicalForceFields.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Crippen.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/DSViewer.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Descriptors.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Descriptors3D.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/FreeSans.ttf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/IPythonConsole.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/MolDrawing.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/SimilarityMaps.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/aggCanvas.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/cairoCanvas.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/canvasbase.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/mplCanvas.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/qtCanvas.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/spingCanvas.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/EState
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/EState/AtomTypes.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/EState/EState.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/EState/EState_VSA.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/EState/Fingerprinter.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/EState/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/EnumerateHeterocycles.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/EnumerateStereoisomers.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FastSDMolSupplier.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FeatFinderCLI.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FeatMaps
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FeatMaps/FeatMapParser.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FeatMaps/FeatMapPoint.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FeatMaps/FeatMapUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FeatMaps/FeatMaps.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FeatMaps/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Features
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Features/FeatDirUtilsRD.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Features/ShowFeats.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Features/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FilterCatalog.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Fingerprints
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Fingerprints/ClusterMols.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Fingerprints/DbFpSupplier.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Fingerprints/FingerprintMols.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Fingerprints/MolSimilarity.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Fingerprints/SimilarityScreener.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Fingerprints/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Fraggle
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Fraggle/FraggleSim.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Fraggle/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FragmentCatalog.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FragmentMatcher.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Fragments.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/FunctionalGroups.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/GraphDescriptors.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Graphs.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Lipinski.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MACCSkeys.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MCS.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolCatalog.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolDb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolDb/FingerprintUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolDb/Loader.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolDb/Loader_orig.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolDb/Loader_sa.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolDb/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolKey
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolKey/InchiInfo.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolKey/MolKey.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolKey/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/charge.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/errors.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/fragment.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/metal.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/normalize.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/resonance.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/standardize.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/tautomer.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/test_standardizer.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/utils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/validate.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/validations.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolSurf.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/PandasTools.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/Generate.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/Gobbi_Pharm2D.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/LazyGenerator.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/Matcher.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/SigFactory.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/Utils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm2D/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm3D
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm3D/EmbedLib.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm3D/ExcludedVolume.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm3D/Pharmacophore.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Pharm3D/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/PropertyMol.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/PyMol.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/QED.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Randomize.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Recap.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/ReducedGraphs.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/SATIS.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/SaltRemover.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Scaffolds
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Scaffolds/MurckoScaffold.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Scaffolds/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/ShowMols.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/SimpleEnum
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/SimpleEnum/Enumerator.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/SimpleEnum/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Subshape
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Subshape/BuilderUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Subshape/SubshapeAligner.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Subshape/SubshapeBuilder.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Subshape/SubshapeObjects.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Subshape/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Subshape/testCombined.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Suppliers
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Suppliers/DbMolSupplier.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Suppliers/MolSupplier.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Suppliers/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/TemplateAlign.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/TorsionFingerprints.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/fmcs
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/fmcs/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/fmcs/fmcs
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/fmcs/fmcs.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/inchi.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataManip
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataManip/Metric
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataManip/Metric/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataManip/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataStructs
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataStructs/BitEnsemble.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataStructs/BitEnsembleDb.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataStructs/BitUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataStructs/HierarchyVis.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataStructs/LazySignature.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataStructs/TopNContainer.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataStructs/VectCollection.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataStructs/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataStructs/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Dbase
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Dbase/DbConnection.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Dbase/DbInfo.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Dbase/DbModule.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Dbase/DbReport.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Dbase/DbResultSet.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Dbase/DbUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Dbase/StorageUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Dbase/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Dbase/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DistanceGeometry
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DistanceGeometry/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ForceField
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ForceField/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Geometry
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Geometry/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/AnalyzeComposite.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/BuildComposite.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Cluster
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Cluster/Butina.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Cluster/ClusterUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Cluster/ClusterVis.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Cluster/Clusters.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Cluster/Murtagh.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Cluster/Resemblance.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Cluster/Standardize.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Cluster/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Cluster/murtagh_test.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Cluster/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Composite
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Composite/AdjustComposite.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Composite/BayesComposite.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Composite/Composite.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Composite/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Composite/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/CompositeRun.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Data
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Data/DataUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Data/FindQuantBounds.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Data/MLData.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Data/Quantize.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Data/SplitData.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Data/Stats.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Data/Transforms.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Data/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Data/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/BuildQuantTree.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/BuildSigTree.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/CrossValidate.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/DecTree.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/Forest.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/ID3.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/PruneTree.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/QuantTree.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/SigTree.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/Tree.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/TreeUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/TreeVis.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/randomtest.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/DecTree/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Descriptors
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Descriptors/CompoundDescriptors.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Descriptors/Descriptors.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Descriptors/MoleculeDescriptors.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Descriptors/Parser.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Descriptors/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Descriptors/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/EnrichPlot.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/GrowComposite.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/InfoTheory
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/InfoTheory/BitClusterer.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/InfoTheory/BitRank.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/InfoTheory/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/InfoTheory/entropy.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/InfoTheory/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/KNN
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/KNN/CrossValidate.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/KNN/DistFunctions.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/KNN/KNNClassificationModel.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/KNN/KNNModel.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/KNN/KNNRegressionModel.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/KNN/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/KNN/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/MLUtils
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/MLUtils/VoteImg.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/MLUtils/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/MatOps.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/ModelPackage
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/ModelPackage/PackageUtils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/ModelPackage/Packager.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/ModelPackage/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/ModelPackage/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/NaiveBayes
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/NaiveBayes/ClassificationModel.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/NaiveBayes/CrossValidate.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/NaiveBayes/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/NaiveBayes/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Neural
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Neural/ActFuncs.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Neural/CrossValidate.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Neural/NetNode.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Neural/Network.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Neural/Trainers.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Neural/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Neural/architecture.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Neural/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/SLT
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/SLT/Risk.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/SLT/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/SLT/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Scoring
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Scoring/Scoring.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Scoring/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Scoring/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/ScreenComposite.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/files.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Numerics
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Numerics/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/RDConfig.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/RDLogger.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/RDRandom.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/SimDivFilters
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/SimDivFilters/SimilarityPickers.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/SimDivFilters/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/SimDivFilters/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/TestRunner.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/Filter.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/Node.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/NodeLib
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/DbMolSupply.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/DbPickleSupplier.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/SDSupply.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/SmartsMolFilter.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/SmartsRemover.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/SmilesDupeFilter.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/SmilesOutput.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/SmilesSupply.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/demo.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/NodeLib/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/Output.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/Supply.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/Transform.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/VLib/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/six.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PDF
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PDF/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PDF/pdfdoc.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PDF/pdfgen.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PDF/pdfgeom.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PDF/pdfmetrics.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PDF/pdfutils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PDF/pidPDF.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pidPIL.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-10.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-10.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-12.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-12.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-14.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-14.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-18.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-18.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-24.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-24.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-8.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-8.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-8.pil.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-10.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-10.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-12.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-12.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-14.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-14.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-18.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-18.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-24.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-24.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-8.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-8.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-10.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-10.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-12.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-12.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-14.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-14.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-18.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-18.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-24.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-24.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-8.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-8.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-10.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-10.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-12.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-12.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-14.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-14.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-18.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-18.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-24.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-24.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-8.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-8.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/metrics.dat
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/removemedium.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-10.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-10.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-12.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-12.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-14.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-14.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-18.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-18.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-24.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-24.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-8.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/symbol-8.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-10.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-10.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-12.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-12.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-14.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-14.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-18.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-18.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-24.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-24.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-8.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-8.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-10.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-10.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-12.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-12.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-14.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-14.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-18.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-18.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-24.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-24.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-8.pbm
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-8.pil
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PS
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PS/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PS/fontinfo.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PS/latin1MetricsCache.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PS/pidPS.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/PS/psmetrics.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/Pyart
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/Pyart/Fontmapping.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/Pyart/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/Pyart/pidPyart.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/Qt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/Qt/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/Qt/pidQt.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/Qt/pidQt4.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/README
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/ReportLab
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/ReportLab/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/ReportLab/pidReportLab.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/SVG
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/SVG/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/SVG/pidSVG.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/TK
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/TK/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/TK/pidTK.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/WX
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/WX/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/WX/pidWX.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/WX/pidWxDc.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/colors.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/examples
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/examples/formatted-strings.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/examples/tkCanvas-with-scrollbars.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/examples/tkCanvasPIL-with-scrollbars.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/pagesizes.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/patches
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/patches/Imaging-1.1-fixplugin-path
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/patches/Imaging-1.1.1.diff
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/pid.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/stringformat.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/tests
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/tests/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/tests/pidtest.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/tests/pstests.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/tests/testallps.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/util
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/util/HTMLPiddler.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/util/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/sping/utils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/12h.gif
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/cactvs.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/chemdraw.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/chemdraw_qax.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/chemutils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/comhack.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/fileutils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/listutils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/retest.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/spiral.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/test1.gif
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/test2.gif
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/utils/test3.gif
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/BaseFeatures.fdef
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Crippen.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/DTDs
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/DTDs/RD_Dataset.dtd
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/DTDs/RD_Model.dtd
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/DTDs/validate.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/FragmentDescriptors.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/FunctionalGroups.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Functional_Group_Hierarchy.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/MolStandardize
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/MolStandardize/acid_base_pairs.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/MolStandardize/acid_base_pairs2.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/MolStandardize/fragmentPatterns.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/MolStandardize/normalizations.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/MolStandardize/tautomerTransforms.in
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/NCI
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/NCI/first_200.props.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/NCI/first_200.tpsa.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/NCI/first_5K.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/NCI/first_5k.tpsa.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Pains
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Pains/README.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Pains/test_data
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Pains/test_data/run_tests.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Pains/test_data/test_set3.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Pains/test_data/wehi_mols.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Pains/wehi_pains.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/RDData.sqlt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/RDTests.sqlt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/Salts.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/SmartsLib
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/SmartsLib/RLewis_smarts.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/SmartsLib/patty_rules.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/SmartsLib/tests
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/SmartsLib/tests/bench2.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/SmartsLib/tests/fps.1000.counts.pkl.gz
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/SmartsLib/tests/mols.1000.pkl.gz
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/rddata.sql
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/struchk
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/struchk/checkfgs.chk
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/struchk/checkfgs.opt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Data/struchk/checkfgs.trn
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors/Correlations
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/DrugLikeT80_CorrMat.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/DrugLikeT80_Correlation.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/FragmentLikeT80_CorrMat.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/FragmentLikeT80_Correlation.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/LeadLikeT80_CorrMat.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/LeadLikeT80_Correlation.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/README
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/ForceField
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/ForceField/ForceFieldTerms.new.odt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Analysis/ForceField/UFF Parameters.ods
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/BackwardsIncompatibleChanges.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/CMakeLists.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/FindMyRDKit.cmake
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example1.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example10.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example11.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example12.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example13.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example14.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example15.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example16.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example2.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example3.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example4.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example5.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example6.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example7.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example8.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example9.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/Cartridge.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/Cookbook.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/GettingStartedInC++.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/GettingStartedInPython.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/Install.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/Makefile
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/Overview.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/RDKit_Book.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/api-docs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/5ht3ligs.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/AmideBond.rxn
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/MinimalFeatures.fdef
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/actives_5ht3.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/actives_5ht3.sdf.gz
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/bzr.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/bzr.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/cdk2.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/chiral.mol
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/input.mol
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/invalid.mol
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/s1p_chembldoc89753.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/solubility.test.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/data/solubility.train.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/exts
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/exts/extapi.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/cdk2_mol1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/cdk2_mol2.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/cdk2_molgrid.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/cdk2_molgrid_aligned.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/indole1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/mfp2_bit872.svg
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_0.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_10.jpg
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_10.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_11.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_12.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_2.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_3.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_4.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_5.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_6.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_7.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_8.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/picture_9.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/rdk_bit1553.svg
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/rdk_bit1553_2.svg
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/similarity_map_charges.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/similarity_map_crippen.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/similarity_map_fp1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/similarity_map_fp2.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/similarity_map_fp3.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/images/similarity_map_rf.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/index.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/modules.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Avalon.pyAvalonTools.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Avalon.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.AllChem.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.Pairs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.Sheridan.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.Torsions.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.Utils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.BRICS.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.BuildFragmentCatalog.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.AlignDepict.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.BulkTester.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.DescriptorUtilities.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.SDFToCSV.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.TemplateExpand.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemicalFeatures.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemicalForceFields.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Crippen.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.DSViewer.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Descriptors.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Descriptors3D.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.IPythonConsole.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.MolDrawing.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.SimilarityMaps.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.aggCanvas.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.cairoCanvas.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.canvasbase.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.mplCanvas.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.qtCanvas.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.rdMolDraw2D.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.AtomTypes.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.EState.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.EState_VSA.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.Fingerprinter.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EnumerateHeterocycles.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EnumerateStereoisomers.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FastSDMolSupplier.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatFinderCLI.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.FeatMapParser.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.FeatMapPoint.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.FeatMapUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.FeatMaps.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Features.FeatDirUtilsRD.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Features.ShowFeats.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Features.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FilterCatalog.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.ClusterMols.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.DbFpSupplier.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.FingerprintMols.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.MolSimilarity.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.SimilarityScreener.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fraggle.FraggleSim.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fraggle.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FragmentCatalog.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FragmentMatcher.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fragments.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FunctionalGroups.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.GraphDescriptors.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Graphs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Lipinski.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MACCSkeys.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MCS.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolCatalog.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.FingerprintUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.Loader.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.Loader_orig.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.Loader_sa.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolKey.InchiInfo.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolKey.MolKey.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolKey.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolStandardize.rdMolStandardize.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolStandardize.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolSurf.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.PandasTools.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.PeriodicTable.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.Generate.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.Gobbi_Pharm2D.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.LazyGenerator.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.Matcher.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.SigFactory.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.Utils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm3D.EmbedLib.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm3D.ExcludedVolume.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm3D.Pharmacophore.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm3D.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.PropertyMol.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.PyMol.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.QED.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Randomize.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Recap.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ReducedGraphs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.SATIS.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.SaltRemover.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Scaffolds.MurckoScaffold.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Scaffolds.ScaffoldTree.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Scaffolds.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ShowMols.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.SimpleEnum.Enumerator.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.SimpleEnum.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.BuilderUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.SubshapeAligner.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.SubshapeBuilder.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.SubshapeObjects.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.testCombined.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Suppliers.DbMolSupplier.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Suppliers.MolSupplier.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Suppliers.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.TemplateAlign.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.TorsionFingerprints.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.fmcs.fmcs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.fmcs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.inchi.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdChemReactions.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdChemicalFeatures.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdCoordGen.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdDepictor.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdDistGeom.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdFMCS.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdFingerprintGenerator.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdForceFieldHelpers.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdFreeSASA.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMMPA.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolAlign.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolCatalog.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolChemicalFeatures.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolDescriptors.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolHash.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolInterchange.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolTransforms.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdPartialCharges.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdRGroupDecomposition.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdReducedGraphs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdSLNParse.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdShapeHelpers.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdStructChecker.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdSubstructLibrary.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdchem.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdfiltercatalog.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdfragcatalog.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdinchi.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdmolfiles.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdmolops.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdqueries.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdtrajectory.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataManip.Metric.rdMetricMatrixCalc.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataManip.Metric.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataManip.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.BitEnsemble.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.BitEnsembleDb.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.BitUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.HierarchyVis.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.LazySignature.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.TopNContainer.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.VectCollection.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.cDataStructs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbConnection.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbInfo.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbModule.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbReport.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbResultSet.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.StorageUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DistanceGeometry.DistGeom.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DistanceGeometry.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ForceField.rdForceField.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ForceField.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Geometry.rdGeometry.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Geometry.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.AnalyzeComposite.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.BuildComposite.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Butina.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.ClusterUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.ClusterVis.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Clustering.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Clusters.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Murtagh.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Resemblance.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Standardize.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Composite.AdjustComposite.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Composite.BayesComposite.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Composite.Composite.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Composite.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.CompositeRun.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.DataUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.FindQuantBounds.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.MLData.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.Quantize.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.SplitData.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.Stats.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.Transforms.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.BuildQuantTree.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.BuildSigTree.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.CrossValidate.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.DecTree.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.Forest.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.ID3.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.PruneTree.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.QuantTree.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.SigTree.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.Tree.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.TreeUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.TreeVis.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.randomtest.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.CompoundDescriptors.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.Descriptors.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.MoleculeDescriptors.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.Parser.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.EnrichPlot.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.GrowComposite.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.BitClusterer.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.BitRank.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.entropy.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.rdInfoTheory.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.CrossValidate.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.DistFunctions.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.KNNClassificationModel.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.KNNModel.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.KNNRegressionModel.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.MLUtils.VoteImg.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.MLUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.MatOps.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.ModelPackage.PackageUtils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.ModelPackage.Packager.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.ModelPackage.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.NaiveBayes.ClassificationModel.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.NaiveBayes.CrossValidate.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.NaiveBayes.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.ActFuncs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.CrossValidate.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.NetNode.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.Network.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.Trainers.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.SLT.Risk.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.SLT.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Scoring.Scoring.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Scoring.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.ScreenComposite.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.files.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Numerics.rdAlignment.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Numerics.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.RDConfig.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.RDLogger.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.RDPaths.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.RDRandom.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.SimDivFilters.SimilarityPickers.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.SimDivFilters.rdSimDivPickers.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.SimDivFilters.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.TestRunner.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.Filter.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.Node.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.DbMolSupply.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.DbPickleSupplier.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SDSupply.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmartsMolFilter.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmartsRemover.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmilesDupeFilter.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmilesOutput.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmilesSupply.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.demo.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.Output.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.Supply.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.Transform.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.rdBase.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.six.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.cactvs.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.chemdraw.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.chemdraw_qax.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.chemutils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.comhack.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.fileutils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.listutils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.spiral.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book/conf.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/An_overview_of_the_RDKit_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/Backwards_incompatible_changes_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/Getting_Started_with_RDKit_in_Python_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/Installation_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/Makefile
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/RDKit_cookbook_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/Supplementary_Text_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/The_RDKit_Book_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/The_RDKit_database_cartridge_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/conf.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/index.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/introduction_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_10.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_11.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_12.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_13.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_14.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_15.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_16.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_17.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_18.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_19.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_2.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_20.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_21.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_22.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_23.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_24.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_25.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_26.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_27.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_28.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_29.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_3.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_30.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_31.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_32.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_33.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_34.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_35.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_36.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_37.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_38.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_39.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_4.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_40.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_41.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_42.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_43.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_44.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_45.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_46.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_47.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_48.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_49.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_5.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_50.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_51.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_52.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_53.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_54.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_55.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_56.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_57.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_58.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_59.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_6.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_60.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_61.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_62.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_7.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_8.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_9.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Book_jp/terminology_jp.rst
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/Chem
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/Chem/FragmentCatalogs.html
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/Chem/Pharm2D.signatures.ai
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/Chem/Pharm2D.signatures.jpg
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/Chem/Pharm2D.triangles.ai
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/Chem/Pharm2D.triangles.jpg
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/CodingStandards.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/EnhancedStereo.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/SGroups.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_abs_and_base.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_abs_and_expand.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_abs_or_base.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_and2_base.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_and2_expand.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_cis_base.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_cis_expand.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_trans_base.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_trans_expand.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_or1_cis_base.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_or1_or2_base.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_or1_trans_base.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Images
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Images/logo.ai
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Images/logo.inkscape.svg
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Images/logo.lrg.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Images/logo.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Images/logo_plain.inkscape.svg
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Images/logo_plain.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Images/wiki
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Images/wiki/morganfp_atomenv1.png
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/FingerprintGenerators.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/MolStandardize.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-DummyCores.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-GenericCores.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-MutipleCores.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-RingSubstitution.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-StereoChemTest.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-example-lactam.ipynb
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/Notebooks/compounds.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Docs/RD.css
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/AtomAtomSimilarity
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/AtomAtomSimilarity/AtomAtomPathSimilarity.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/CMakeLists.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ChiralPairs
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ChiralPairs/ChiralDescriptors.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ChiralPairs/README.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/CMakeLists.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/ConformerParser.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/ConformerParser.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/Wrap
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/Wrap/CMakeLists.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/Wrap/rdConformerParser.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/Wrap/testConformerParser.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/Wrap/test_list.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/test.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/test_list.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/README.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/cdk2.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/centroid.tsv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/clustered.tsv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/clustered_parse.tsv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/fastcluster.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/fp.tsv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/testdata
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/testdata/cdk2.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/testdata/converted.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/testdata/sdf2smi.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Glare
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Glare/README.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/Glare/glare.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/IFG
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/IFG/README
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/IFG/ifg.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/LEF
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/LEF/AddLabels.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/LEF/ClusterFps.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/LEF/CreateFps.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/LEF/DistancePlot.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/LEF/DistancePredict.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/LEF/README.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/M_Kossner
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/M_Kossner/BaseFeatures_DIP2_NoMicrospecies.fdef
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/M_Kossner/Frames.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/M_Kossner/README
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/MolVS
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/MolVS/molvs_cli.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/NP_Score
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/NP_Score/README
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/NP_Score/npscorer.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/NP_Score/publicnp.model.gz
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF/Makefile
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF/PBFRDKit.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF/PBFRDKit.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF/README
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF/demo.cpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF/pbf.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF/testData
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF/testData/egfr.out
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/PBF/testData/egfr.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/RxnRoleAssignment
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/RxnRoleAssignment/README.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/RxnRoleAssignment/__init__.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/RxnRoleAssignment/identifyReactants.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/RxnRoleAssignment/utils.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/SA_Score
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/SA_Score/README
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/SA_Score/UnitTestSAScore.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/SA_Score/data
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/SA_Score/data/zim.100.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/SA_Score/fpscores.pkl.gz
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/SA_Score/sascorer.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/atomcontrib.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/cxn_tversky.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/data
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/data/ChEMBL_11265_actives.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/data/final_fraggle_results.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/data/fragmentation_tversky_out
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/data/query.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/data/query_fragmentation.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/fraggle.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/rdkit_tversky.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/fraggle/readme.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/README.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/cansmirk.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/create_mmp_db.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_cansmirks.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_input_smi.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_input_subs.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_input_subs_smarts.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_input_trans.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_input_trans_smarts.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_search_smi_output.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_search_subs_output.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_search_subs_smart_output.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_search_trans_output.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_search_trans_smarts_output.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_fragmented.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_mmps_default.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_mmps_maxheavy.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_mmps_maxratio.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_mmps_sym.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_mmps_sym_maxheavy.csv
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_mol_trans_output.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_smiles_mol_trans.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_smirks.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_smirks_mol_trans.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_transfroms.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/simple.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/indexing.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/mol_transform.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/rfrag.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/search_mmp_db.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/test_list.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/mmpa/test_rfrag.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/pzc
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/pzc/p_con.html
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/pzc/p_con.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Contrib/pzc/readme.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/CreateDb.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/SearchDb.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/TestDbCLI.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/moe_like.dsc
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/README
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr.2.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr.smi
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr_q1.mol
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/pubchem.200.sdf
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/__pycache__
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Scripts
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Scripts/FeatFinderCLI.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Scripts/PythonFormat.py
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Scripts/README.md
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Scripts/create_deb_packages.sh
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Scripts/test.sh
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/README
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/license.txt
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/CoordGen.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdCoordGen.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDGeneral.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDGeneral.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDGeneral.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/Exceptions.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/BadFileException.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/BoostStartInclude.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/BoostEndInclude.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/Dict.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/FileParseException.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/Invariant.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/RDAny.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/RDValue.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/RDValue-doublemagic.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/RDValue-taggedunion.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/RDLog.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/RDProps.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/RDThreads.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/StreamOps.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/types.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/utils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/versions.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/RDConfig.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/LocaleSwitcher.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/Ranking.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/hanoiSort.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/export.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/test.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/hash/hash
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/hash/hash/detail
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/hash/hash/detail/float_functions.hpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/hash/hash/detail/hash_float.hpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/hash/hash/extensions.hpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/hash/hash/hash.hpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDGeneral/hash/hash/hash_fwd.hpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDBoost.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDBoost.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDBoost.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDBoost/Wrap.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDBoost/PySequenceHolder.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDBoost/list_indexing_suite.hpp
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDBoost/python.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDBoost/boost_numpy.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDBoost/python_streambuf.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/rdBase.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDStreams.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDStreams.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDStreams.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/RDStreams/streams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDataStructs.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDataStructs.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDataStructs.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/base64.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/BitOps.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/BitVect.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/BitVects.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/BitVectUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/DatastructsException.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/DatastructsStreamOps.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/DiscreteDistMat.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/DiscreteValueVect.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/ExplicitBitVect.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/SparseBitVect.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/SparseIntVect.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/FPBReader.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataStructs/MultiFPBReader.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataStructs/cDataStructs.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDGeometryLib.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDGeometryLib.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRDGeometryLib.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Geometry/Grid3D.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Geometry/GridUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Geometry/point.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Geometry/Transform2D.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Geometry/Transform3D.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Geometry/Transform.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Geometry/UniformGrid3D.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Geometry/Utils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Geometry/rdGeometry.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Numerics/Matrix.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Numerics/SquareMatrix.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Numerics/SymmMatrix.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Numerics/Vector.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Numerics/Conrec.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitAlignment.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitAlignment.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitAlignment.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Numerics/Alignment/AlignPoints.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Numerics/rdAlignment.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitEigenSolvers.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitEigenSolvers.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitEigenSolvers.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Numerics/EigenSolvers/PowerEigenSolver.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitOptimizer.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitOptimizer.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitOptimizer.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Numerics/Optimizer/BFGSOpt.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitForceField.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitForceField.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitForceField.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/Contrib.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/ForceField.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/AngleBend.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/BondStretch.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/Contribs.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/DistanceConstraint.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/AngleConstraint.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/TorsionConstraint.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/PositionConstraint.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/Nonbonded.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/Params.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/Inversion.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/UFF/TorsionAngle.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/AngleBend.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/BondStretch.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/StretchBend.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/OopBend.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/TorsionAngle.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/Nonbonded.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/Contribs.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/DistanceConstraint.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/AngleConstraint.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/TorsionConstraint.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/PositionConstraint.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ForceField/MMFF/Params.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ForceField/rdForceField.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDistGeometry.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDistGeometry.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDistGeometry.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DistGeom/BoundsMatrix.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DistGeom/ChiralSet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DistGeom/ChiralViolationContrib.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DistGeom/DistGeomUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DistGeom/DistViolationContrib.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DistGeom/FourthDimContrib.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DistGeom/TriangleSmooth.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DistanceGeometry/DistGeom.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitCatalogs.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitCatalogs.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitCatalogs.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Catalogs/CatalogEntry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Catalogs/Catalog.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Catalogs/CatalogParams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitGraphMol.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitGraphMol.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitGraphMol.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Atom.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/atomic_data.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/AtomIterators.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Bond.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/BondIterators.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Canon.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Chirality.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Conformer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/details.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/GraphMol.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolOps.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolPickler.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/PeriodicTable.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/QueryAtom.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/QueryBond.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/QueryOps.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/RDKitBase.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/RDKitQueries.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Resonance.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/RingInfo.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Rings.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ROMol.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/RWMol.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SanitException.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SubstanceGroup.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/StereoGroup.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MonomerInfo.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/new_canon.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolBundle.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDepictor.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDepictor.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDepictor.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Depictor/DepictUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Depictor/EmbeddedFrag.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Depictor/RDDepictor.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdDepictor.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSmilesParse.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSmilesParse.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSmilesParse.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SmilesParse/primes.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SmilesParse/SmartsWrite.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SmilesParse/SmilesParse.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SmilesParse/SmilesParseOps.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SmilesParse/SmilesWrite.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFileParsers.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFileParsers.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFileParsers.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/FileParsers.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/FileParserUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/MolFileStereochem.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/MolSupplier.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/MolWriters.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/SequenceParsers.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/SequenceWriters.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSubstructMatch.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSubstructMatch.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSubstructMatch.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Substruct/SubstructMatch.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Substruct/SubstructUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitChemReactions.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitChemReactions.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitChemReactions.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/Reaction.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/ReactionParser.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/ReactionPickler.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/ReactionFingerprints.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/ReactionUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/ReactionRunner.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/PreprocessRxn.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/SanitizeRxn.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/Enumerate.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/EnumerateBase.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/EnumerationPickler.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/EnumerationStrategyBase.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/CartesianProduct.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/RandomSample.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/RandomSampleAllBBs.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdChemReactions.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitChemTransforms.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitChemTransforms.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitChemTransforms.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemTransforms/ChemTransforms.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ChemTransforms/MolFragmenter.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSubgraphs.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSubgraphs.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSubgraphs.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Subgraphs/Subgraphs.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Subgraphs/SubgraphUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFilterCatalog.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFilterCatalog.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFilterCatalog.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FilterCatalog/FilterCatalogEntry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FilterCatalog/FilterCatalog.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FilterCatalog/FilterMatcherBase.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FilterCatalog/FilterMatchers.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FilterCatalog/FunctionalGroupHierarchy.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdfiltercatalog.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFragCatalog.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFragCatalog.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFragCatalog.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FragCatalog/FragCatalogEntry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FragCatalog/FragCatalogUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FragCatalog/FragCatGenerator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FragCatalog/FragCatParams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FragCatalog/FragFPGenerator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdfragcatalog.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDescriptors.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDescriptors.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDescriptors.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/Crippen.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/Lipinski.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/MolDescriptors.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/MolSurf.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/ConnectivityDescriptors.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/MQN.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/RegisterDescriptor.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/Property.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/AUTOCORR2D.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/Data3Ddescriptors.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/MolData3Ddescriptors.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/USRDescriptor.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdMolDescriptors.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFingerprints.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFingerprints.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFingerprints.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/AtomPairs.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/Fingerprints.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/MorganFingerprints.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/MACCS.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/FingerprintGenerator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/AtomPairGenerator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/MorganGenerator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/RDKitFPGenerator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/TopologicalTorsionGenerator.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/FingerprintUtil.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdFingerprintGenerator.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitPartialCharges.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitPartialCharges.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitPartialCharges.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/PartialCharges/GasteigerCharges.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/PartialCharges/GasteigerParams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdPartialCharges.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolTransforms.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolTransforms.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolTransforms.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolTransforms/MolTransforms.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdMolTransforms.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitForceFieldHelpers.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitForceFieldHelpers.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitForceFieldHelpers.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/FFConvenience.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/UFF/AtomTyper.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/UFF/Builder.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/UFF/UFF.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/MMFF/AtomTyper.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/MMFF/Builder.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/MMFF/MMFF.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/CrystalFF/TorsionAngleM6.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdForceFieldHelpers.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDistGeomHelpers.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDistGeomHelpers.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitDistGeomHelpers.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/DistGeomHelpers/Embedder.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdDistGeom.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolAlign.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolAlign.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolAlign.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolAlign/AlignMolecules.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolAlign/O3AAlignMolecules.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdMolAlign.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolChemicalFeatures.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolChemicalFeatures.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolChemicalFeatures.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolChemicalFeatures/FeatureParser.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolChemicalFeatures/MolChemicalFeatureFactory.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolChemicalFeatures/MolChemicalFeature.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdMolChemicalFeatures.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitShapeHelpers.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitShapeHelpers.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitShapeHelpers.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ShapeHelpers/ShapeEncoder.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ShapeHelpers/ShapeUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdShapeHelpers.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolCatalog.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolCatalog.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolCatalog.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolCatalog/MolCatalogEntry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolCatalog/MolCatalog.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolCatalog/MolCatalogParams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdMolCatalog.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2D.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2DSVG.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2Dwx.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2DUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2DDetails.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolDraw2D.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolDraw2D.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolDraw2D.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/rdMolDraw2D.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFMCS.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFMCS.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitFMCS.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FMCS/FMCS.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FMCS/Graph.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FMCS/Seed.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FMCS/SeedSet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FMCS/MatchTable.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FMCS/RingMatchTableSet.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FMCS/SubstructureCache.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FMCS/SubstructMatchCustom.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/FMCS/MaximumCommonSubgraph.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdFMCS.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolHash.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolHash.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolHash.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolHash/MolHash.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolHash/nmmolhash.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdMolHash.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMMPA.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMMPA.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMMPA.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MMPA/MMPA.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdMMPA.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitStructChecker.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitStructChecker.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitStructChecker.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/StructChecker/StructChecker.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/StructChecker/Utilites.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/StructChecker/Pattern.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/StructChecker/Stereo.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/StructChecker/StripSmallFragments.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/StructChecker/ReCharge.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/StructChecker/Tautomer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdStructChecker.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitReducedGraphs.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitReducedGraphs.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitReducedGraphs.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/ReducedGraphs/ReducedGraphs.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdReducedGraphs.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitTrajectory.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitTrajectory.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitTrajectory.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Trajectory/Snapshot.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/Trajectory/Trajectory.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSubstructLibrary.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSubstructLibrary.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSubstructLibrary.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SubstructLibrary/SubstructLibrary.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SubstructLibrary/SubstructLibrarySerialization.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdSubstructLibrary.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRGroupDecomposition.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRGroupDecomposition.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitRGroupDecomposition.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/RGroupDecomposition/RGroupDecomp.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdRGroupDecomposition.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolInterchange.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolInterchange.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolInterchange.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolInterchange/MolInterchange.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolInterchange/details.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdMolInterchange.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSLNParse.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSLNParse.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSLNParse.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SLNParse/SLNAttribs.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SLNParse/SLNParse.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/SLNParse/SLNParseOps.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdSLNParse.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdchem.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdmolops.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdqueries.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdmolfiles.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdtrajectory.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolStandardize.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolStandardize.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitMolStandardize.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/MolStandardize.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Metal.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Normalize.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Validate.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Charge.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Tautomer.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Fragment.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/FragmentCatalogEntry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/FragmentCatalogParams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/FragmentCatalogUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/AcidBaseCatalogEntry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/AcidBaseCatalogParams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/AcidBaseCatalogUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TransformCatalogEntry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TransformCatalogParams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TransformCatalogUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TautomerCatalogEntry.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TautomerCatalogParams.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TautomerCatalogUtils.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/MolStandardize/rdMolStandardize.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/AndQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/EqualityQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/GreaterEqualQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/GreaterQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/LessEqualQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/LessQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/NullQueryAlgebra.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/OrQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/Query.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/QueryObjects.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/RangeQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/SetQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Query/XOrQuery.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/Features/Feature.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataManip/MetricMatrixCalc/MetricFuncs.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/DataManip/MetricMatrixCalc/MetricMatrixCalc.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/DataManip/Metric/rdMetricMatrixCalc.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSimDivPickers.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSimDivPickers.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitSimDivPickers.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/SimDivPickers/DistPicker.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/SimDivPickers/LeaderPicker.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/SimDivPickers/HierarchicalClusterPicker.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/SimDivPickers/MaxMinPicker.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/SimDivFilters/rdSimDivPickers.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKithc.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKithc.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKithc.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Cluster/Clustering.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitInfoTheory.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitInfoTheory.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitInfoTheory.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/InfoTheory/rdInfoTheory.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/ML/Data/cQuantize.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitChemicalFeatures.so.1.2019.09.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitChemicalFeatures.so.1
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/libRDKitChemicalFeatures.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ChemicalFeatures/ChemicalFeature.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/include/rdkit/ChemicalFeatures/FreeChemicalFeature.h
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/rdChemicalFeatures.so
-- Installing: /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/RDPaths.py
make[2]: Leaving directory '/<<PKGBUILDDIR>>/obj-arm-linux-gnueabihf'
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   debian/rules override_dh_install
make[1]: Entering directory '/<<PKGBUILDDIR>>'
ln -sf /usr/share/fonts/truetype/freefont/FreeSans.ttf /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/Chem/Draw/FreeSans.ttf
dh_install -ppython3-rdkit /usr/lib/python3
rm -f -rf /<<PKGBUILDDIR>>/debian/tmp/usr/lib/python3/dist-packages/rdkit/docs/
rm -f -rf /<<PKGBUILDDIR>>/debian/tmp/usr/share/RDKit/Projects/__pycache__
dh_numpy3
dh_install --list-missing
dh_install: warning: Please use dh_missing --list-missing/--fail-missing instead
dh_install: warning: This feature will be removed in compat 12.
dh_missing: warning: usr/lib/cmake/rdkit/rdkit-targets.cmake exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/cmake/rdkit/rdkit-targets-none.cmake exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/cmake/rdkit/rdkit-config.cmake exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/lib/cmake/rdkit/rdkit-config-version.cmake exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/README exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/license.txt exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/RD.css exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/DrugLikeT80_CorrMat.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/DrugLikeT80_Correlation.csv exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/FragmentLikeT80_CorrMat.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/FragmentLikeT80_Correlation.csv exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/LeadLikeT80_CorrMat.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/LeadLikeT80_Correlation.csv exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/README exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Analysis/ForceField/ForceFieldTerms.new.odt exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Analysis/ForceField/UFF Parameters.ods exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/BackwardsIncompatibleChanges.md exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/Cartridge.md exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/Cookbook.md exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/GettingStartedInC++.md exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/GettingStartedInPython.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/Install.md exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/Makefile exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/Overview.md exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/RDKit_Book.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/api-docs.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/index.rst exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/conf.py exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/CMakeLists.txt exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/FindMyRDKit.cmake exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example1.cpp exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example10.cpp exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example11.cpp exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example12.cpp exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example13.cpp exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example14.cpp exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example15.cpp exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example16.cpp exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example2.cpp exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example3.cpp exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example4.cpp exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example5.cpp exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example6.cpp exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example7.cpp exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example8.cpp exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/C++Examples/example9.cpp exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/data/5ht3ligs.sdf exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/data/AmideBond.rxn exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/data/MinimalFeatures.fdef exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/data/actives_5ht3.sdf exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/data/actives_5ht3.sdf.gz exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/data/bzr.sdf exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/data/bzr.smi exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/data/cdk2.sdf exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/data/chiral.mol exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/data/input.mol exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/data/invalid.mol exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/data/s1p_chembldoc89753.txt exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/data/solubility.test.sdf exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/data/solubility.train.sdf exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/exts/extapi.py exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/images/cdk2_mol1.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/images/cdk2_mol2.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/images/cdk2_molgrid.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/images/cdk2_molgrid_aligned.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/images/indole1.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/images/mfp2_bit872.svg exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/images/picture_0.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book/images/picture_1.png exists in debian/tmp but is not installed to anywhere
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dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_38.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_39.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_4.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_40.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_41.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_42.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_43.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_44.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_45.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_46.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_47.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_48.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_49.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_5.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_50.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_51.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_52.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_53.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_54.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_55.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_56.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_57.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_58.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_59.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_6.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_60.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_61.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_62.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_7.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_8.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Book_jp/supple_images/jp_supple_9.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/CodingStandards.md exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/EnhancedStereo.md exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/SGroups.md exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/Chem/FragmentCatalogs.html exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/Chem/Pharm2D.signatures.ai exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/Chem/Pharm2D.signatures.jpg exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/Chem/Pharm2D.triangles.ai exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/Chem/Pharm2D.triangles.jpg exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_abs_and_base.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_abs_and_expand.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_abs_or_base.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_and2_base.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_and2_expand.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_cis_base.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_cis_expand.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_trans_base.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_trans_expand.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_or1_cis_base.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_or1_or2_base.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Code/images/enhanced_stereo_or1_trans_base.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Images/logo.ai exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Images/logo.inkscape.svg exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Images/logo.lrg.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Images/logo.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Images/logo_plain.inkscape.svg exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Images/logo_plain.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Images/wiki/morganfp_atomenv1.png exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/FingerprintGenerators.ipynb exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/MolStandardize.ipynb exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-DummyCores.ipynb exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-GenericCores.ipynb exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-MutipleCores.ipynb exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-RingSubstitution.ipynb exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-StereoChemTest.ipynb exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-example-lactam.ipynb exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Docs/Notebooks/compounds.txt exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Scripts/FeatFinderCLI.py exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Scripts/PythonFormat.py exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Scripts/README.md exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Scripts/create_deb_packages.sh exists in debian/tmp but is not installed to anywhere
dh_missing: warning: usr/share/RDKit/Scripts/test.sh exists in debian/tmp but is not installed to anywhere
	The following debhelper tools have reported what they installed (with files per package)
	 * dh_install: librdkit-dev (48), librdkit1 (94), postgresql-12-rdkit (0), python3-rdkit (1), rdkit-data (3), rdkit-doc (0)
	If the missing files are installed by another tool, please file a bug against it.
	When filing the report, if the tool is not part of debhelper itself, please reference the
	"Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+).
	  (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz)
	Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built
	For a short-term work-around: Add the files to debian/not-installed
mkdir -p /<<PKGBUILDDIR>>/debian/rdkit-doc/usr/share/doc/rdkit/
cp /<<PKGBUILDDIR>>/Docs/Book/_build/latex/RDKit.pdf /<<PKGBUILDDIR>>/debian/rdkit-doc/usr/share/doc/rdkit/
cp -a /<<PKGBUILDDIR>>/Docs/Book/_build/html /<<PKGBUILDDIR>>/debian/rdkit-doc/usr/share/doc/rdkit/
pg_buildext install /<<PKGBUILDDIR>>/Code/PgSQL/rdkit build-%v postgresql-%v-rdkit
supported-versions: WARNING! Unknown distribution: raspbian
debian found in ID_LIKE, treating as Debian
### install 12 ###
make[2]: Entering directory '/<<PKGBUILDDIR>>/build-12'
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib'
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/share/postgresql/12/extension'
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/share/postgresql/12/extension'
/usr/bin/install -c -m 755  rdkit.so '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib/rdkit.so'
/usr/bin/install -c -m 644 /<<PKGBUILDDIR>>/Code/PgSQL/rdkit/rdkit.control '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/share/postgresql/12/extension/'
/usr/bin/install -c -m 644  rdkit--3.8.sql '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/share/postgresql/12/extension/'
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib/bitcode/rdkit'
/bin/mkdir -p '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib/bitcode'/rdkit/
/usr/bin/install -c -m 644 rdkit_io.bc '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 mol_op.bc '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 bfp_op.bc '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 sfp_op.bc '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 rxn_op.bc '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 rdkit_gist.bc '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 bfp_gist.bc '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 bfp_gin.bc '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 low_gist.bc '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 guc.bc '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 cache.bc '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 adapter.bc '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 bitstring.bc '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib/bitcode'/rdkit/./
cd '/<<PKGBUILDDIR>>/debian/postgresql-12-rdkit/usr/lib/postgresql/12/lib/bitcode' && /usr/lib/llvm-10/bin/llvm-lto -thinlto -thinlto-action=thinlink -o rdkit.index.bc rdkit/rdkit_io.bc rdkit/mol_op.bc rdkit/bfp_op.bc rdkit/sfp_op.bc rdkit/rxn_op.bc rdkit/rdkit_gist.bc rdkit/bfp_gist.bc rdkit/bfp_gin.bc rdkit/low_gist.bc rdkit/guc.bc rdkit/cache.bc rdkit/adapter.bc rdkit/bitstring.bc
make[2]: Leaving directory '/<<PKGBUILDDIR>>/build-12'
ln -sf /usr/share/javascript/jquery/jquery.js /<<PKGBUILDDIR>>/debian/rdkit-doc/usr/share/doc/rdkit//html/cppapi/jquery.js
ln -sf /usr/share/javascript/jquery/jquery.js /<<PKGBUILDDIR>>/debian/rdkit-doc/usr/share/doc/rdkit//html/_static/jquery.js
ln -sf /usr/share/javascript/underscore/underscore.js /<<PKGBUILDDIR>>/debian/rdkit-doc/usr/share/doc/rdkit//html/_static/underscore.js
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_installdocs -a -O--buildsystem=cmake -O--parallel
   debian/rules override_dh_installchangelogs
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_installchangelogs ReleaseNotes.md
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   debian/rules override_dh_python3
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_python3 -ppython3-rdkit
I: dh_python3 fs:343: renaming rdBase.so to rdBase.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdChemReactions.so to rdChemReactions.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdChemicalFeatures.so to rdChemicalFeatures.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdCoordGen.so to rdCoordGen.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdDepictor.so to rdDepictor.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdDistGeom.so to rdDistGeom.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdFMCS.so to rdFMCS.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdFingerprintGenerator.so to rdFingerprintGenerator.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdForceFieldHelpers.so to rdForceFieldHelpers.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdMMPA.so to rdMMPA.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdMolAlign.so to rdMolAlign.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdMolCatalog.so to rdMolCatalog.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdMolChemicalFeatures.so to rdMolChemicalFeatures.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdMolDescriptors.so to rdMolDescriptors.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdMolHash.so to rdMolHash.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdMolInterchange.so to rdMolInterchange.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdMolTransforms.so to rdMolTransforms.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdPartialCharges.so to rdPartialCharges.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdRGroupDecomposition.so to rdRGroupDecomposition.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdReducedGraphs.so to rdReducedGraphs.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdSLNParse.so to rdSLNParse.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdShapeHelpers.so to rdShapeHelpers.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdStructChecker.so to rdStructChecker.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdSubstructLibrary.so to rdSubstructLibrary.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdchem.so to rdchem.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdfiltercatalog.so to rdfiltercatalog.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdfragcatalog.so to rdfragcatalog.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdmolfiles.so to rdmolfiles.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdmolops.so to rdmolops.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdqueries.so to rdqueries.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdtrajectory.so to rdtrajectory.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdMolDraw2D.so to rdMolDraw2D.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdMolStandardize.so to rdMolStandardize.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdMetricMatrixCalc.so to rdMetricMatrixCalc.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming cDataStructs.so to cDataStructs.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming DistGeom.so to DistGeom.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdForceField.so to rdForceField.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdGeometry.so to rdGeometry.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming Clustering.so to Clustering.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming cQuantize.so to cQuantize.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdInfoTheory.so to rdInfoTheory.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdAlignment.so to rdAlignment.cpython-38-arm-linux-gnueabihf.so
I: dh_python3 fs:343: renaming rdSimDivPickers.so to rdSimDivPickers.cpython-38-arm-linux-gnueabihf.so
dh_numpy3 -ppython3-rdkit
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
   dh_installinit -a -O--buildsystem=cmake -O--parallel
   dh_lintian -a -O--buildsystem=cmake -O--parallel
   dh_perl -a -O--buildsystem=cmake -O--parallel
   dh_link -a -O--buildsystem=cmake -O--parallel
   dh_strip_nondeterminism -a -O--buildsystem=cmake -O--parallel
   dh_compress -a -O--buildsystem=cmake -O--parallel
   dh_fixperms -a -O--buildsystem=cmake -O--parallel
   dh_missing -a -O--buildsystem=cmake -O--parallel
   dh_strip -a -O--buildsystem=cmake -O--parallel
   dh_makeshlibs -a -O--buildsystem=cmake -O--parallel
   dh_shlibdeps -a -O--buildsystem=cmake -O--parallel
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolTransforms.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitAlignment.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitDataStructs.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolChemicalFeatures.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitSimDivPickers.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMMPA.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolInterchange.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitChemTransforms.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolCatalog.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitRDBoost.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitFMCS.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolAlign.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitCatalogs.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitTrajectory.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitSubstructMatch.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolStandardize.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitFragCatalog.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitEigenSolvers.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitSubstructLibrary.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitRDGeneral.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitFilterCatalog.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitForceFieldHelpers.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitDistGeomHelpers.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitShapeHelpers.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitDepictor.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitOptimizer.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitDistGeometry.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitRDGeometryLib.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitDescriptors.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitSubgraphs.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitForceField.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitRGroupDecomposition.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitFileParsers.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitChemicalFeatures.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitGraphMol.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitPartialCharges.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitInfoTheory.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitChemReactions.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitSmilesParse.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolDraw2D.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitStructChecker.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitFingerprints.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitReducedGraphs.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitSLNParse.so.1.2019.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolHash.so.1.2019.09.1 found in none of the libraries
   dh_installdeb -a -O--buildsystem=cmake -O--parallel
   dh_gencontrol -a -O--buildsystem=cmake -O--parallel
dpkg-gencontrol: warning: Depends field of package librdkit-dev: substitution variable ${shlibs:Depends} used, but is not defined
dpkg-gencontrol: warning: package postgresql-12-rdkit: substitution variable ${python3:Depends} unused, but is defined
dpkg-gencontrol: warning: package librdkit1: substitution variable ${python3:Depends} unused, but is defined
dpkg-gencontrol: warning: package librdkit-dev: substitution variable ${python3:Depends} unused, but is defined
dpkg-gencontrol: warning: package postgresql-12-rdkit: substitution variable ${python3:Depends} unused, but is defined
dpkg-gencontrol: warning: package librdkit1: substitution variable ${python3:Depends} unused, but is defined
   dh_md5sums -a -O--buildsystem=cmake -O--parallel
   dh_builddeb -a -O--buildsystem=cmake -O--parallel
dpkg-deb: building package 'postgresql-12-rdkit-dbgsym' in '../postgresql-12-rdkit-dbgsym_201909.1-3+b1_armhf.deb'.
dpkg-deb: building package 'librdkit-dev' in '../librdkit-dev_201909.1-3+b1_armhf.deb'.
dpkg-deb: building package 'python3-rdkit' in '../python3-rdkit_201909.1-3+b1_armhf.deb'.
dpkg-deb: building package 'librdkit1' in '../librdkit1_201909.1-3+b1_armhf.deb'.
dpkg-deb: building package 'postgresql-12-rdkit' in '../postgresql-12-rdkit_201909.1-3+b1_armhf.deb'.
dpkg-deb: building package 'librdkit1-dbgsym' in '../librdkit1-dbgsym_201909.1-3+b1_armhf.deb'.
dpkg-deb: building package 'python3-rdkit-dbgsym' in '../python3-rdkit-dbgsym_201909.1-3+b1_armhf.deb'.
 dpkg-genbuildinfo --build=any
 dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../rdkit_201909.1-3+b1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2020-04-16T04:46:52Z

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Post Build Chroot                                                            |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


rdkit_201909.1-3+b1_armhf.changes:
----------------------------------

Format: 1.8
Date: Mon, 06 Apr 2020 09:34:18 -0400
Source: rdkit (201909.1-3)
Binary: librdkit-dev librdkit1 librdkit1-dbgsym postgresql-12-rdkit postgresql-12-rdkit-dbgsym python3-rdkit python3-rdkit-dbgsym
Binary-Only: yes
Architecture: armhf
Version: 201909.1-3+b1
Distribution: bullseye-staging
Urgency: low
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Raspbian wandboard test autobuilder <root@raspbian.org>
Description:
 librdkit-dev - Collection of cheminformatics and machine-learning software (deve
 librdkit1  - Collection of cheminformatics and machine-learning software (shar
 postgresql-12-rdkit - Cheminformatics and machine-learning software (PostgreSQL Cartrid
 python3-rdkit - Collection of cheminformatics and machine-learning software
Changes:
 rdkit (201909.1-3+b1) bullseye-staging; urgency=low, binary-only=yes
 .
   * Binary-only non-maintainer upload for armhf; no source changes.
   * rebuild due to debcheck failure
Checksums-Sha1:
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 6f82670bfa844dc0784a9f2aadace7f1ae9f1857 2585372 librdkit1_201909.1-3+b1_armhf.deb
 06103e8b8c7b859fe17a17cb20af897feb5b5232 1133816 postgresql-12-rdkit-dbgsym_201909.1-3+b1_armhf.deb
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Checksums-Sha256:
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Files:
 3594edd15901eee1b53b5b5f6024b64a 319244 libdevel optional librdkit-dev_201909.1-3+b1_armhf.deb
 62212d135e1a86dc6004c8dd053a38a5 79840676 debug optional librdkit1-dbgsym_201909.1-3+b1_armhf.deb
 522f69cbbc7bdfff1f80d9fabf4d455b 2585372 libs optional librdkit1_201909.1-3+b1_armhf.deb
 38cfaed1fbf99a55cd36a75bd6dece0a 1133816 debug optional postgresql-12-rdkit-dbgsym_201909.1-3+b1_armhf.deb
 a81aa4a1c79771f93bd7df9ee2076043 438064 database optional postgresql-12-rdkit_201909.1-3+b1_armhf.deb
 8803b0fe1000d1289aa4dda5e84b392e 56561824 debug optional python3-rdkit-dbgsym_201909.1-3+b1_armhf.deb
 8d2a9f2d38f86e5468d56d67db9c41b5 2727832 python optional python3-rdkit_201909.1-3+b1_armhf.deb
 b23664b38b9b58650df93a644dd62ffc 15392 science optional rdkit_201909.1-3+b1_armhf.buildinfo

+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


librdkit-dev_201909.1-3+b1_armhf.deb
------------------------------------

 new Debian package, version 2.0.
 size 319244 bytes: control archive=9052 bytes.
    1521 bytes,    37 lines      control              
   25421 bytes,   304 lines      md5sums              
 Package: librdkit-dev
 Source: rdkit (201909.1-3)
 Version: 201909.1-3+b1
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 1895
 Depends: librdkit1 (= 201909.1-3+b1)
 Section: libdevel
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Collection of cheminformatics and machine-learning software (development files)
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.  Features Include:
  .
   * Chemical reaction handling and transforms
   * Substructure searching with SMARTS
   * Canonical SMILES
   * Molecule-molecule alignment
   * Large number of molecular descriptors, including topological,
     compositional, EState, SlogP/SMR, VSA and Feature-map vectors
   * Fragmentation using RECAP rules
   * 2D coordinate generation and depiction, including constrained depiction
   * 3D coordinate generation using geometry embedding
   * UFF and MMFF94 forcefields
   * Chirality support, including calculation of (R/S) stereochemistry codes
   * 2D pharmacophore searching
   * Fingerprinting, including Daylight-like, atom pairs, topological
     torsions, Morgan algorithm and MACCS keys
   * Calculation of shape similarity
   * Multi-molecule maximum common substructure
   * Machine-learning via clustering and information theory algorithms
   * Gasteiger-Marsili partial charge calculation
  .
  File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit
  binary format.
  .
  This package contains the header files.

drwxr-xr-x root/root         0 2020-04-06 13:34 ./
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/include/
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/include/rdkit/
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/include/rdkit/Catalogs/
-rw-r--r-- root/root     15984 2019-10-25 03:22 ./usr/include/rdkit/Catalogs/Catalog.h
-rw-r--r-- root/root      1386 2019-10-25 03:22 ./usr/include/rdkit/Catalogs/CatalogEntry.h
-rw-r--r-- root/root      1245 2019-10-25 03:22 ./usr/include/rdkit/Catalogs/CatalogParams.h
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/include/rdkit/ChemicalFeatures/
-rw-r--r-- root/root      1052 2019-10-25 03:22 ./usr/include/rdkit/ChemicalFeatures/ChemicalFeature.h
-rw-r--r-- root/root      2849 2019-10-25 03:22 ./usr/include/rdkit/ChemicalFeatures/FreeChemicalFeature.h
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/include/rdkit/DataManip/
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/include/rdkit/DataManip/MetricMatrixCalc/
-rw-r--r-- root/root      1867 2019-10-25 03:22 ./usr/include/rdkit/DataManip/MetricMatrixCalc/MetricFuncs.h
-rw-r--r-- root/root      3532 2019-10-25 03:22 ./usr/include/rdkit/DataManip/MetricMatrixCalc/MetricMatrixCalc.h
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/include/rdkit/DataStructs/
-rw-r--r-- root/root     11703 2019-10-25 03:22 ./usr/include/rdkit/DataStructs/BitOps.h
-rw-r--r-- root/root      2509 2019-10-25 03:22 ./usr/include/rdkit/DataStructs/BitVect.h
-rw-r--r-- root/root      1120 2019-10-25 03:22 ./usr/include/rdkit/DataStructs/BitVectUtils.h
-rw-r--r-- root/root       584 2019-10-25 03:22 ./usr/include/rdkit/DataStructs/BitVects.h
-rw-r--r-- root/root       841 2019-10-25 03:22 ./usr/include/rdkit/DataStructs/DatastructsException.h
-rw-r--r-- root/root      2742 2019-10-25 03:22 ./usr/include/rdkit/DataStructs/DatastructsStreamOps.h
-rw-r--r-- root/root       864 2019-10-25 03:22 ./usr/include/rdkit/DataStructs/DiscreteDistMat.h
-rw-r--r-- root/root      4334 2019-10-25 03:22 ./usr/include/rdkit/DataStructs/DiscreteValueVect.h
-rw-r--r-- root/root      3250 2019-10-25 03:22 ./usr/include/rdkit/DataStructs/ExplicitBitVect.h
-rw-r--r-- root/root      9593 2019-10-25 03:22 ./usr/include/rdkit/DataStructs/FPBReader.h
-rw-r--r-- root/root      7651 2019-10-25 03:22 ./usr/include/rdkit/DataStructs/MultiFPBReader.h
-rw-r--r-- root/root      3024 2019-10-25 03:22 ./usr/include/rdkit/DataStructs/SparseBitVect.h
-rw-r--r-- root/root     16369 2019-10-25 03:22 ./usr/include/rdkit/DataStructs/SparseIntVect.h
-rw-r--r-- root/root      1296 2019-10-25 03:22 ./usr/include/rdkit/DataStructs/base64.h
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/include/rdkit/DistGeom/
-rw-r--r-- root/root      3456 2019-10-25 03:22 ./usr/include/rdkit/DistGeom/BoundsMatrix.h
-rw-r--r-- root/root      1653 2019-10-25 03:22 ./usr/include/rdkit/DistGeom/ChiralSet.h
-rw-r--r-- root/root      3577 2019-10-25 03:22 ./usr/include/rdkit/DistGeom/ChiralViolationContrib.h
-rw-r--r-- root/root      6528 2019-10-25 03:22 ./usr/include/rdkit/DistGeom/DistGeomUtils.h
-rw-r--r-- root/root      1852 2019-10-25 03:22 ./usr/include/rdkit/DistGeom/DistViolationContrib.h
-rw-r--r-- root/root      2007 2019-10-25 03:22 ./usr/include/rdkit/DistGeom/FourthDimContrib.h
-rw-r--r-- root/root      1310 2019-10-25 03:22 ./usr/include/rdkit/DistGeom/TriangleSmooth.h
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/include/rdkit/Features/
-rw-r--r-- root/root      2913 2019-10-25 03:22 ./usr/include/rdkit/Features/Feature.h
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/include/rdkit/ForceField/
-rw-r--r-- root/root      1126 2019-10-25 03:22 ./usr/include/rdkit/ForceField/Contrib.h
-rw-r--r-- root/root      8756 2019-10-25 03:22 ./usr/include/rdkit/ForceField/ForceField.h
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/include/rdkit/ForceField/MMFF/
-rw-r--r-- root/root      2988 2019-10-25 03:22 ./usr/include/rdkit/ForceField/MMFF/AngleBend.h
-rw-r--r-- root/root      2168 2019-10-25 03:22 ./usr/include/rdkit/ForceField/MMFF/AngleConstraint.h
-rw-r--r-- root/root      2278 2019-10-25 03:22 ./usr/include/rdkit/ForceField/MMFF/BondStretch.h
-rw-r--r-- root/root       663 2019-10-25 03:22 ./usr/include/rdkit/ForceField/MMFF/Contribs.h
-rw-r--r-- root/root      2074 2019-10-25 03:22 ./usr/include/rdkit/ForceField/MMFF/DistanceConstraint.h
-rw-r--r-- root/root      4024 2019-10-25 03:22 ./usr/include/rdkit/ForceField/MMFF/Nonbonded.h
-rw-r--r-- root/root      2390 2019-10-25 03:22 ./usr/include/rdkit/ForceField/MMFF/OopBend.h
-rw-r--r-- root/root     40700 2019-10-25 03:22 ./usr/include/rdkit/ForceField/MMFF/Params.h
-rw-r--r-- root/root      1698 2019-10-25 03:22 ./usr/include/rdkit/ForceField/MMFF/PositionConstraint.h
-rw-r--r-- root/root      2386 2019-10-25 03:22 ./usr/include/rdkit/ForceField/MMFF/StretchBend.h
-rw-r--r-- root/root      3125 2019-10-25 03:22 ./usr/include/rdkit/ForceField/MMFF/TorsionAngle.h
-rw-r--r-- root/root      2696 2019-10-25 03:22 ./usr/include/rdkit/ForceField/MMFF/TorsionConstraint.h
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/include/rdkit/ForceField/UFF/
-rw-r--r-- root/root      3538 2019-10-25 03:22 ./usr/include/rdkit/ForceField/UFF/AngleBend.h
-rw-r--r-- root/root      2139 2019-10-25 03:22 ./usr/include/rdkit/ForceField/UFF/AngleConstraint.h
-rw-r--r-- root/root      2538 2019-10-25 03:22 ./usr/include/rdkit/ForceField/UFF/BondStretch.h
-rw-r--r-- root/root       599 2019-10-25 03:22 ./usr/include/rdkit/ForceField/UFF/Contribs.h
-rw-r--r-- root/root      2070 2019-10-25 03:22 ./usr/include/rdkit/ForceField/UFF/DistanceConstraint.h
-rw-r--r-- root/root      2719 2019-10-25 03:22 ./usr/include/rdkit/ForceField/UFF/Inversion.h
-rw-r--r-- root/root      2872 2019-10-25 03:22 ./usr/include/rdkit/ForceField/UFF/Nonbonded.h
-rw-r--r-- root/root      4570 2019-10-25 03:22 ./usr/include/rdkit/ForceField/UFF/Params.h
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drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/include/rdkit/RDGeneral/hash/
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/include/rdkit/RDGeneral/hash/hash/
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/include/rdkit/RDGeneral/hash/hash/detail/
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drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/include/rdkit/RDStreams/
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drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/include/rdkit/SimDivPickers/
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drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/lib/
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitAlignment.so -> libRDKitAlignment.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitCatalogs.so -> libRDKitCatalogs.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitChemReactions.so -> libRDKitChemReactions.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitChemTransforms.so -> libRDKitChemTransforms.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitChemicalFeatures.so -> libRDKitChemicalFeatures.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitDataStructs.so -> libRDKitDataStructs.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitDepictor.so -> libRDKitDepictor.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitDescriptors.so -> libRDKitDescriptors.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitDistGeomHelpers.so -> libRDKitDistGeomHelpers.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitDistGeometry.so -> libRDKitDistGeometry.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitEigenSolvers.so -> libRDKitEigenSolvers.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitFMCS.so -> libRDKitFMCS.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitFileParsers.so -> libRDKitFileParsers.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitFilterCatalog.so -> libRDKitFilterCatalog.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitFingerprints.so -> libRDKitFingerprints.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitForceField.so -> libRDKitForceField.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitForceFieldHelpers.so -> libRDKitForceFieldHelpers.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitFragCatalog.so -> libRDKitFragCatalog.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitGraphMol.so -> libRDKitGraphMol.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitInfoTheory.so -> libRDKitInfoTheory.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitMMPA.so -> libRDKitMMPA.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitMolAlign.so -> libRDKitMolAlign.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitMolCatalog.so -> libRDKitMolCatalog.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitMolChemicalFeatures.so -> libRDKitMolChemicalFeatures.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitMolDraw2D.so -> libRDKitMolDraw2D.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitMolHash.so -> libRDKitMolHash.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitMolInterchange.so -> libRDKitMolInterchange.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitMolStandardize.so -> libRDKitMolStandardize.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitMolTransforms.so -> libRDKitMolTransforms.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitOptimizer.so -> libRDKitOptimizer.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitPartialCharges.so -> libRDKitPartialCharges.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitRDBoost.so -> libRDKitRDBoost.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitRDGeneral.so -> libRDKitRDGeneral.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitRDGeometryLib.so -> libRDKitRDGeometryLib.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitRDStreams.so -> libRDKitRDStreams.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitRGroupDecomposition.so -> libRDKitRGroupDecomposition.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitReducedGraphs.so -> libRDKitReducedGraphs.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitSLNParse.so -> libRDKitSLNParse.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitShapeHelpers.so -> libRDKitShapeHelpers.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitSimDivPickers.so -> libRDKitSimDivPickers.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitSmilesParse.so -> libRDKitSmilesParse.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitStructChecker.so -> libRDKitStructChecker.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitSubgraphs.so -> libRDKitSubgraphs.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitSubstructLibrary.so -> libRDKitSubstructLibrary.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitSubstructMatch.so -> libRDKitSubstructMatch.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitTrajectory.so -> libRDKitTrajectory.so.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKithc.so -> libRDKithc.so.1
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/share/
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/share/doc/
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/share/doc/librdkit-dev/
-rw-r--r-- root/root       223 2020-04-06 13:34 ./usr/share/doc/librdkit-dev/changelog.Debian.armhf.gz
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-rw-r--r-- root/root      6705 2020-04-06 13:34 ./usr/share/doc/librdkit-dev/copyright


librdkit1-dbgsym_201909.1-3+b1_armhf.deb
----------------------------------------

 new Debian package, version 2.0.
 size 79840676 bytes: control archive=2656 bytes.
    2269 bytes,    12 lines      control              
    4982 bytes,    47 lines      md5sums              
 Package: librdkit1-dbgsym
 Source: rdkit (201909.1-3)
 Version: 201909.1-3+b1
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 81513
 Depends: librdkit1 (= 201909.1-3+b1)
 Section: debug
 Priority: optional
 Description: debug symbols for librdkit1
 Build-Ids: 10ac11d90a98aecf941f4df093034682b75b4430 10c144f7fcdf8b1320af94be21b501ff1db67fa4 12c96cf32404aa5c124d61a98d4691bff97a3708 130a5cd57c61a6b182c75f42f5ca5c63981b53ec 18731d97575f661b111c7f86010634eafab0fd21 1bade940a3a2f2ed7db14463aef493a209eb9531 1f61c474510d9f14c79118a10fbbca2092d92967 1fe048abfad40fc6d3fc085bd74a256081c8d2f0 2650b3ef8c4935f8091d4bb02480c7d46cfe3152 2655ce87d544623bd0920680532faaa93f1ed412 2947758b8a94a6b7acb25242d537df2d4222364a 2ab03f4e31c4bd66a52a1e439ba67e1e55dcdce7 305de4b5b0a2d1be51e5c6e9e28ccb22a111d915 337a0fa0d110af2bd920173eae89ab5245b4975d 3bd0bcb1ff9351aed00deabdedd3e110826d4f62 48d06c84105bef4392ce01c65a2f6ef58f13222d 57a22236ae923237f88d5a54f60c6b336bbc0135 5a0256b993620ecd2d9c524476e35474c6ed2c6f 5d820878007053781ac69d7dcdf33266b9d3365b 651baf54d966e3163500965b841b6def0c1cad09 6e99b19df1f8994df0dd90a735fae714a1ee547b 71686d0eeff999fc7cec752a350961e13cf3a809 7d858c5f5df515804c47d36bd42bf8c28d0bedc3 85b07c5dacaf830403f17be3e7e612ef04f5b42d 8a99c4def51219224b79822fa8662c9ed6aab90c 8b17cada2779aa1ba848a48003840b8b2736b0e9 9b087aede3a4d10f4a3600bbc3ffb4833f2405a4 9d6a937e6103c769191b6ce5959c9178a518357d 9e7078a5f1d097b13944ead872777b1d225d741e a4667f4d6934b24c1d27905cd00483c40620094f a83def1f68e62779e2fe8dc57a0643bfb6cfc1bc ab1f192b0e5dbddaca37e0a54278a0fb5f2c2da7 b11cb6aee3bb67e66b81277c6a70f87f88ba0949 ba9dd8dbba77bbe79ce030be6a5da63acd9cf8b3 c1f4ca313aab08c262116d4621a29383254715b0 cbeb8acf0306792336f7d9172d8c6e7ad667ffa4 ce4ebe0b0bb114867660038a784c05c0ee80d34f d4950849a6709b85cdc5d86099eb2686a0c8e860 d7b528329c179dcead65f28c7eab0c2dd2a57873 e3be53e3a9f0cc71667887121f5cd4829b3237d3 e4fe4d957e863fc6d8b7f35fbaade6f20ee8bb14 f5d000f1f4ff9803f1bf43495b152b554ff6026a fa7e5320ba263a925df8704c2fdbdba26ed3d101 fd681cdeb0a68e662e8cd2e5d5522191703a6767 fd878f0b8827c9d36244f4363745229b0ae46081 feebf444fba467685d6b085ed344ad0f8adabe85 ffd99860376c5319ba40e25ff9b65c704e755678

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librdkit1_201909.1-3+b1_armhf.deb
---------------------------------

 new Debian package, version 2.0.
 size 2585372 bytes: control archive=2928 bytes.
    1734 bytes,    37 lines      control              
    3999 bytes,    52 lines      md5sums              
    1511 bytes,    47 lines      shlibs               
      66 bytes,     2 lines      triggers             
 Package: librdkit1
 Source: rdkit (201909.1-3)
 Version: 201909.1-3+b1
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 11589
 Depends: libboost-iostreams1.67.0, libboost-python1.67.0, libboost-python1.67.0-py37, libboost-serialization1.67.0, libc6 (>= 2.29), libgcc-s1 (>= 3.5), libmaeparser1 (>= 1.2.3), libpython3.8 (>= 3.8.2), libschroedinger-coordgenlibs1, libstdc++6 (>= 9)
 Section: libs
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Collection of cheminformatics and machine-learning software (shared libraries)
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.  Features Include:
  .
   * Chemical reaction handling and transforms
   * Substructure searching with SMARTS
   * Canonical SMILES
   * Molecule-molecule alignment
   * Large number of molecular descriptors, including topological,
     compositional, EState, SlogP/SMR, VSA and Feature-map vectors
   * Fragmentation using RECAP rules
   * 2D coordinate generation and depiction, including constrained depiction
   * 3D coordinate generation using geometry embedding
   * UFF and MMFF94 forcefields
   * Chirality support, including calculation of (R/S) stereochemistry codes
   * 2D pharmacophore searching
   * Fingerprinting, including Daylight-like, atom pairs, topological
     torsions, Morgan algorithm and MACCS keys
   * Calculation of shape similarity
   * Multi-molecule maximum common substructure
   * Machine-learning via clustering and information theory algorithms
   * Gasteiger-Marsili partial charge calculation
  .
  File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit
  binary format.
  .
  This package contains the shared libraries.

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lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitForceField.so.1 -> libRDKitForceField.so.1.2019.09.1
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lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitForceFieldHelpers.so.1 -> libRDKitForceFieldHelpers.so.1.2019.09.1
-rw-r--r-- root/root    378272 2020-04-06 13:34 ./usr/lib/libRDKitForceFieldHelpers.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitFragCatalog.so.1 -> libRDKitFragCatalog.so.1.2019.09.1
-rw-r--r-- root/root    136608 2020-04-06 13:34 ./usr/lib/libRDKitFragCatalog.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitGraphMol.so.1 -> libRDKitGraphMol.so.1.2019.09.1
-rw-r--r-- root/root   1369504 2020-04-06 13:34 ./usr/lib/libRDKitGraphMol.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitInfoTheory.so.1 -> libRDKitInfoTheory.so.1.2019.09.1
-rw-r--r-- root/root     38304 2020-04-06 13:34 ./usr/lib/libRDKitInfoTheory.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitMMPA.so.1 -> libRDKitMMPA.so.1.2019.09.1
-rw-r--r-- root/root     71072 2020-04-06 13:34 ./usr/lib/libRDKitMMPA.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitMolAlign.so.1 -> libRDKitMolAlign.so.1.2019.09.1
-rw-r--r-- root/root    177568 2020-04-06 13:34 ./usr/lib/libRDKitMolAlign.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitMolCatalog.so.1 -> libRDKitMolCatalog.so.1.2019.09.1
-rw-r--r-- root/root     38304 2020-04-06 13:34 ./usr/lib/libRDKitMolCatalog.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitMolChemicalFeatures.so.1 -> libRDKitMolChemicalFeatures.so.1.2019.09.1
-rw-r--r-- root/root    124320 2020-04-06 13:34 ./usr/lib/libRDKitMolChemicalFeatures.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitMolDraw2D.so.1 -> libRDKitMolDraw2D.so.1.2019.09.1
-rw-r--r-- root/root    374256 2020-04-06 13:34 ./usr/lib/libRDKitMolDraw2D.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitMolHash.so.1 -> libRDKitMolHash.so.1.2019.09.1
-rw-r--r-- root/root    149136 2020-04-06 13:34 ./usr/lib/libRDKitMolHash.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitMolInterchange.so.1 -> libRDKitMolInterchange.so.1.2019.09.1
-rw-r--r-- root/root    206240 2020-04-06 13:34 ./usr/lib/libRDKitMolInterchange.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitMolStandardize.so.1 -> libRDKitMolStandardize.so.1.2019.09.1
-rw-r--r-- root/root    460196 2020-04-06 13:34 ./usr/lib/libRDKitMolStandardize.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitMolTransforms.so.1 -> libRDKitMolTransforms.so.1.2019.09.1
-rw-r--r-- root/root     79264 2020-04-06 13:34 ./usr/lib/libRDKitMolTransforms.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitOptimizer.so.1 -> libRDKitOptimizer.so.1.2019.09.1
-rw-r--r-- root/root      5384 2020-04-06 13:34 ./usr/lib/libRDKitOptimizer.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitPartialCharges.so.1 -> libRDKitPartialCharges.so.1.2019.09.1
-rw-r--r-- root/root     62880 2020-04-06 13:34 ./usr/lib/libRDKitPartialCharges.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitRDBoost.so.1 -> libRDKitRDBoost.so.1.2019.09.1
-rw-r--r-- root/root      9576 2020-04-06 13:34 ./usr/lib/libRDKitRDBoost.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitRDGeneral.so.1 -> libRDKitRDGeneral.so.1.2019.09.1
-rw-r--r-- root/root     95608 2020-04-06 13:34 ./usr/lib/libRDKitRDGeneral.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitRDGeometryLib.so.1 -> libRDKitRDGeometryLib.so.1.2019.09.1
-rw-r--r-- root/root    107940 2020-04-06 13:34 ./usr/lib/libRDKitRDGeometryLib.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitRDStreams.so.1 -> libRDKitRDStreams.so.1.2019.09.1
-rw-r--r-- root/root    103840 2020-04-06 13:34 ./usr/lib/libRDKitRDStreams.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitRGroupDecomposition.so.1 -> libRDKitRGroupDecomposition.so.1.2019.09.1
-rw-r--r-- root/root    169376 2020-04-06 13:34 ./usr/lib/libRDKitRGroupDecomposition.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitReducedGraphs.so.1 -> libRDKitReducedGraphs.so.1.2019.09.1
-rw-r--r-- root/root     66996 2020-04-06 13:34 ./usr/lib/libRDKitReducedGraphs.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitSLNParse.so.1 -> libRDKitSLNParse.so.1.2019.09.1
-rw-r--r-- root/root    329632 2020-04-06 13:34 ./usr/lib/libRDKitSLNParse.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitShapeHelpers.so.1 -> libRDKitShapeHelpers.so.1.2019.09.1
-rw-r--r-- root/root     26016 2020-04-06 13:34 ./usr/lib/libRDKitShapeHelpers.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitSimDivPickers.so.1 -> libRDKitSimDivPickers.so.1.2019.09.1
-rw-r--r-- root/root     21920 2020-04-06 13:34 ./usr/lib/libRDKitSimDivPickers.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitSmilesParse.so.1 -> libRDKitSmilesParse.so.1.2019.09.1
-rw-r--r-- root/root    509344 2020-04-06 13:34 ./usr/lib/libRDKitSmilesParse.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitStructChecker.so.1 -> libRDKitStructChecker.so.1.2019.09.1
-rw-r--r-- root/root    367152 2020-04-06 13:34 ./usr/lib/libRDKitStructChecker.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitSubgraphs.so.1 -> libRDKitSubgraphs.so.1.2019.09.1
-rw-r--r-- root/root     71072 2020-04-06 13:34 ./usr/lib/libRDKitSubgraphs.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitSubstructLibrary.so.1 -> libRDKitSubstructLibrary.so.1.2019.09.1
-rw-r--r-- root/root    423328 2020-04-06 13:34 ./usr/lib/libRDKitSubstructLibrary.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitSubstructMatch.so.1 -> libRDKitSubstructMatch.so.1.2019.09.1
-rw-r--r-- root/root    124320 2020-04-06 13:34 ./usr/lib/libRDKitSubstructMatch.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKitTrajectory.so.1 -> libRDKitTrajectory.so.1.2019.09.1
-rw-r--r-- root/root     62904 2020-04-06 13:34 ./usr/lib/libRDKitTrajectory.so.1.2019.09.1
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/lib/libRDKithc.so.1 -> libRDKithc.so.1.2019.09.1
-rw-r--r-- root/root      9428 2020-04-06 13:34 ./usr/lib/libRDKithc.so.1.2019.09.1
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/share/
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/share/doc/
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/share/doc/librdkit1/
-rw-r--r-- root/root       223 2020-04-06 13:34 ./usr/share/doc/librdkit1/changelog.Debian.armhf.gz
-rw-r--r-- root/root      4562 2020-04-06 13:34 ./usr/share/doc/librdkit1/changelog.Debian.gz
-rw-r--r-- root/root     65510 2019-10-25 03:22 ./usr/share/doc/librdkit1/changelog.gz
-rw-r--r-- root/root      6705 2020-04-06 13:34 ./usr/share/doc/librdkit1/copyright
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/share/lintian/
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/share/lintian/overrides/
-rw-r--r-- root/root       107 2020-04-06 13:34 ./usr/share/lintian/overrides/librdkit1


postgresql-12-rdkit-dbgsym_201909.1-3+b1_armhf.deb
--------------------------------------------------

 new Debian package, version 2.0.
 size 1133816 bytes: control archive=552 bytes.
     412 bytes,    12 lines      control              
     106 bytes,     1 lines      md5sums              
 Package: postgresql-12-rdkit-dbgsym
 Source: rdkit (201909.1-3)
 Version: 201909.1-3+b1
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 1199
 Depends: postgresql-12-rdkit (= 201909.1-3+b1)
 Section: debug
 Priority: optional
 Description: debug symbols for postgresql-12-rdkit
 Build-Ids: 8e205869b883bf62f46b105818af6741c41b4a41

drwxr-xr-x root/root         0 2020-04-06 13:34 ./
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/lib/
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/lib/debug/
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/lib/debug/.build-id/8e/
-rw-r--r-- root/root   1216624 2020-04-06 13:34 ./usr/lib/debug/.build-id/8e/205869b883bf62f46b105818af6741c41b4a41.debug
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/share/
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/share/doc/
lrwxrwxrwx root/root         0 2020-04-06 13:34 ./usr/share/doc/postgresql-12-rdkit-dbgsym -> postgresql-12-rdkit


postgresql-12-rdkit_201909.1-3+b1_armhf.deb
-------------------------------------------

 new Debian package, version 2.0.
 size 438064 bytes: control archive=1720 bytes.
    1577 bytes,    37 lines      control              
    1761 bytes,    21 lines      md5sums              
 Package: postgresql-12-rdkit
 Source: rdkit (201909.1-3)
 Version: 201909.1-3+b1
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 1018
 Depends: libc6 (>= 2.4), libgcc-s1 (>= 3.5), librdkit1, libstdc++6 (>= 9), postgresql-12
 Section: database
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Cheminformatics and machine-learning software (PostgreSQL Cartridge)
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.  Features Include:
  .
   * Chemical reaction handling and transforms
   * Substructure searching with SMARTS
   * Canonical SMILES
   * Molecule-molecule alignment
   * Large number of molecular descriptors, including topological,
     compositional, EState, SlogP/SMR, VSA and Feature-map vectors
   * Fragmentation using RECAP rules
   * 2D coordinate generation and depiction, including constrained depiction
   * 3D coordinate generation using geometry embedding
   * UFF and MMFF94 forcefields
   * Chirality support, including calculation of (R/S) stereochemistry codes
   * 2D pharmacophore searching
   * Fingerprinting, including Daylight-like, atom pairs, topological
     torsions, Morgan algorithm and MACCS keys
   * Calculation of shape similarity
   * Multi-molecule maximum common substructure
   * Machine-learning via clustering and information theory algorithms
   * Gasteiger-Marsili partial charge calculation
  .
  File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit
  binary format.
  .
  This package contains the PostgreSQL extension.

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drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/lib/
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/lib/postgresql/
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/lib/postgresql/12/
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/lib/postgresql/12/lib/
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/lib/postgresql/12/lib/bitcode/
-rw-r--r-- root/root     40552 2020-04-06 13:34 ./usr/lib/postgresql/12/lib/bitcode/rdkit.index.bc
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/lib/postgresql/12/lib/bitcode/rdkit/
-rw-r--r-- root/root    415244 2020-04-06 13:34 ./usr/lib/postgresql/12/lib/bitcode/rdkit/adapter.bc
-rw-r--r-- root/root      7128 2020-04-06 13:34 ./usr/lib/postgresql/12/lib/bitcode/rdkit/bfp_gin.bc
-rw-r--r-- root/root     16356 2020-04-06 13:34 ./usr/lib/postgresql/12/lib/bitcode/rdkit/bfp_gist.bc
-rw-r--r-- root/root     17352 2020-04-06 13:34 ./usr/lib/postgresql/12/lib/bitcode/rdkit/bfp_op.bc
-rw-r--r-- root/root      8296 2020-04-06 13:34 ./usr/lib/postgresql/12/lib/bitcode/rdkit/bitstring.bc
-rw-r--r-- root/root     15756 2020-04-06 13:34 ./usr/lib/postgresql/12/lib/bitcode/rdkit/cache.bc
-rw-r--r-- root/root     14960 2020-04-06 13:34 ./usr/lib/postgresql/12/lib/bitcode/rdkit/guc.bc
-rw-r--r-- root/root     14064 2020-04-06 13:34 ./usr/lib/postgresql/12/lib/bitcode/rdkit/low_gist.bc
-rw-r--r-- root/root     37960 2020-04-06 13:34 ./usr/lib/postgresql/12/lib/bitcode/rdkit/mol_op.bc
-rw-r--r-- root/root     18952 2020-04-06 13:34 ./usr/lib/postgresql/12/lib/bitcode/rdkit/rdkit_gist.bc
-rw-r--r-- root/root     21708 2020-04-06 13:34 ./usr/lib/postgresql/12/lib/bitcode/rdkit/rdkit_io.bc
-rw-r--r-- root/root     10404 2020-04-06 13:34 ./usr/lib/postgresql/12/lib/bitcode/rdkit/rxn_op.bc
-rw-r--r-- root/root     15212 2020-04-06 13:34 ./usr/lib/postgresql/12/lib/bitcode/rdkit/sfp_op.bc
-rw-r--r-- root/root    243212 2020-04-06 13:34 ./usr/lib/postgresql/12/lib/rdkit.so
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/share/
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/share/doc/
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/share/doc/postgresql-12-rdkit/
-rw-r--r-- root/root       223 2020-04-06 13:34 ./usr/share/doc/postgresql-12-rdkit/changelog.Debian.armhf.gz
-rw-r--r-- root/root      4562 2020-04-06 13:34 ./usr/share/doc/postgresql-12-rdkit/changelog.Debian.gz
-rw-r--r-- root/root     65510 2019-10-25 03:22 ./usr/share/doc/postgresql-12-rdkit/changelog.gz
-rw-r--r-- root/root      6705 2020-04-06 13:34 ./usr/share/doc/postgresql-12-rdkit/copyright
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/share/postgresql/
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/share/postgresql/12/
drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/share/postgresql/12/extension/
-rw-r--r-- root/root     42915 2020-04-06 13:34 ./usr/share/postgresql/12/extension/rdkit--3.8.sql
-rw-r--r-- root/root       135 2020-04-06 13:34 ./usr/share/postgresql/12/extension/rdkit.control


python3-rdkit-dbgsym_201909.1-3+b1_armhf.deb
--------------------------------------------

 new Debian package, version 2.0.
 size 56561824 bytes: control archive=2508 bytes.
    2137 bytes,    13 lines      control              
    4558 bytes,    43 lines      md5sums              
 Package: python3-rdkit-dbgsym
 Source: rdkit (201909.1-3)
 Version: 201909.1-3+b1
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 62410
 Depends: python3-rdkit (= 201909.1-3+b1)
 Section: debug
 Priority: optional
 Description: debug symbols for python3-rdkit
 Build-Ids: 0299aff272a23895e95935a6344d3899b7d79f52 0ca01caca7b43143986c7600d816dba6ad962a55 0ca97fab0a9f5a0370ca96b2ab4d8b89708f762e 1dc1865227e23bee646f410171ecab8d04612570 2b274bab695795e03ac485da48b6fdcbb2c7d883 2ced60d782d71390c5a1fbc8e9198b6e693b408f 34caaac659129308fc4c17364a6b64e63b8ffed8 37c8630e65e7a461f30d922af42c8f9d993c8c5b 39b8b56e6ce3514b6ccefd42745babaa927ac844 457a87c3c9e79d20ad21b55110fe8c500ac11f9e 4c2b807071672179055ce59b21ce6436444e61af 4c4a9f14d30742834dc1f680b6ca20bcb3f5d785 4f15403e2c07bae58cc26d1ee7e85c7a09389120 6405e498a248fbe2065438bb2b7db6e46502f00b 667d863261dc7309c87ef3b067d1b58b94741622 66b6e7a7d33b3dd1afff51b85731b09280bc4682 67b7bcc03a71f2e6f909bfa831c2f31d339ca932 6be39bfcec5ed387d7a88e027eb36d794c425948 6c38bb3ffd8c90d295b54a8cd506aefa49b9c1a9 70dda59e63f5a22f5da01c7b37cb7e315785e7ec 76946e9135fe3d7a317ff336d466d97f7d72b3d1 7dc26b66602d0bc022b1885f15019529c3460c07 856b7b1b861b6361b103fcacc9dacd894ea02c9e 882ac0110a6d60042ffb786be8e677eaee4f2e08 887227b7d436817244c4fb5f9ccbfd56e1c51492 9362e9da791540dd247682d138c43b8e7089de66 9890434abf88c893c916552a879a1303b40bab87 a39e498bc5d0d6e03b3d96e4f8af02e0981a6c06 b649d67884ab80a55a6d2e22665508b1639689d6 bb1a9f6f2acb2f9d1878a1dd5867c11cafeeef70 c1e1d3d2cae06ee0dae043b1212dae088b3c7903 c39ba3d6ff8cf4b44b2c6df9ece9e0c9e6abd59d cdd581bb91877b662ca2ccdf60ef716c0983f268 d3c8a08945867b5e7efe07aa914be0cb96d83b19 d483a7b549dffd0f181efb1e1ec4b14d8ea2c488 dd83285dfa293bf34ec79059f4dcf7d818f05c03 e29edf5c828c5cba681ab803dd6a88eb4e42a199 f4ca25983e00cfc5880409499c3a36bd461ca3b8 f52a587b7bc26fb51e57142f4c1e2b612e97759d f6d82458310077de8b9511f3fefd88729256f89e f8a932f187dce706d207d20c3be18f64b51bf784 fbdb181f0715b04b1731729b661f8e510a5d48d3 feef12176f21e773931eca6975363c149eafa2a7
 Python-Version: 3.8

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drwxr-xr-x root/root         0 2020-04-06 13:34 ./usr/lib/
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python3-rdkit_201909.1-3+b1_armhf.deb
-------------------------------------

 new Debian package, version 2.0.
 size 2727832 bytes: control archive=12552 bytes.
    1829 bytes,    38 lines      control              
   44655 bytes,   451 lines      md5sums              
     251 bytes,    12 lines   *  postinst             #!/bin/sh
     400 bytes,    12 lines   *  prerm                #!/bin/sh
 Package: python3-rdkit
 Source: rdkit (201909.1-3)
 Version: 201909.1-3+b1
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 16482
 Depends: fonts-freefont-ttf, rdkit-data, python3 (<< 3.9), python3 (>= 3.8~), python3-numpy (>= 1:1.16.0~rc1), python3-numpy-abi9, python3:any, libboost-python1.67.0, libboost-python1.67.0-py37, libc6 (>= 2.29), libgcc-s1 (>= 3.5), libmaeparser1 (>= 1.2.3), libpython3.8 (>= 3.8.2), librdkit1, libschroedinger-coordgenlibs1, libstdc++6 (>= 9)
 Suggests: rdkit-doc
 Provides: python3.8-rdkit
 Section: python
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Collection of cheminformatics and machine-learning software
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.  Features Include:
  .
   * Chemical reaction handling and transforms
   * Substructure searching with SMARTS
   * Canonical SMILES
   * Molecule-molecule alignment
   * Large number of molecular descriptors, including topological,
     compositional, EState, SlogP/SMR, VSA and Feature-map vectors
   * Fragmentation using RECAP rules
   * 2D coordinate generation and depiction, including constrained depiction
   * 3D coordinate generation using geometry embedding
   * UFF and MMFF94 forcefields
   * Chirality support, including calculation of (R/S) stereochemistry codes
   * 2D pharmacophore searching
   * Fingerprinting, including Daylight-like, atom pairs, topological
     torsions, Morgan algorithm and MACCS keys
   * Calculation of shape similarity
   * Multi-molecule maximum common substructure
   * Machine-learning via clustering and information theory algorithms
   * Gasteiger-Marsili partial charge calculation
  .
  File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit
  binary format.
 Python-Version: 3.8

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| Post Build                                                                   |
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| Cleanup                                                                      |
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Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

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| Summary                                                                      |
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Build Architecture: armhf
Build-Space: 3618484
Build-Time: 17506
Distribution: bullseye-staging
Host Architecture: armhf
Install-Time: 2673
Job: rdkit_201909.1-3
Machine Architecture: armhf
Package: rdkit
Package-Time: 20255
Source-Version: 201909.1-3
Space: 3618484
Status: successful
Version: 201909.1-3+b1
--------------------------------------------------------------------------------
Finished at 2020-04-16T04:46:52Z
Build needed 05:37:35, 3618484k disc space
Raspbian Package Auto-Building

Build log for rdkit (201909.1-3+b1) on armhf
