Build log for rdkit (201809.1+dfsg-6) on armhf

rdkit → 201809.1+dfsg-6 → armhf → 2019-02-04 12:27:41

sbuild (Debian sbuild) 0.71.0 (24 Aug 2016) on testwandboard

+==============================================================================+
| rdkit 201809.1+dfsg-6 (armhf)                Mon, 04 Feb 2019 07:38:20 +0000 |
+==============================================================================+

Package: rdkit
Version: 201809.1+dfsg-6
Source Version: 201809.1+dfsg-6
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/buster-staging-armhf-sbuild-45498e54-6d28-4a83-8f07-d9052ec59410' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [11.3 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [13.0 MB]
Fetched 24.3 MB in 32s (762 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'rdkit' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/debichem-team/rdkit.git
Please use:
git clone https://salsa.debian.org/debichem-team/rdkit.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 47.9 MB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main rdkit 201809.1+dfsg-6 (dsc) [2797 B]
Get:2 http://172.17.0.1/private buster-staging/main rdkit 201809.1+dfsg-6 (tar) [47.8 MB]
Get:3 http://172.17.0.1/private buster-staging/main rdkit 201809.1+dfsg-6 (diff) [94.3 kB]
Fetched 47.9 MB in 19s (2457 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/rdkit-4pPy1Q/rdkit-201809.1+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/rdkit-4pPy1Q' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install build-essential                                                      |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-iQDoM9/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-iQDoM9/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-iQDoM9/gpg/trustdb.gpg: trustdb created
gpg: key 35506D9A48F77B2E: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg:               imported: 1
gpg: key 35506D9A48F77B2E: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 35506D9A48F77B2E: secret key imported
gpg: Total number processed: 1
gpg:              unchanged: 1
gpg:       secret keys read: 1
gpg:   secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-iQDoM9/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-iQDoM9/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-iQDoM9/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-iQDoM9/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-iQDoM9/apt_archive ./ Packages [433 B]
Fetched 2109 B in 1s (2951 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install core build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  ca-certificates dbus dbus-user-session e2fsprogs-l10n krb5-locales libexpat1
  libgpg-error-l10n libgssapi-krb5-2 libk5crypto3 libkeyutils1 libkrb5-3
  libkrb5support0 libnss-systemd libpam-systemd libssl1.1 openssl systemd-sysv
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 16 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-iQDoM9/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 15817 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any all)

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: bison, cmake, debhelper (>> 9), dh-python, doxygen, flex, imagemagick, latexmk, libboost-dev, libboost-python-dev, libboost-regex-dev, libboost-system-dev, libboost-thread-dev, libschroedinger-coordgenlibs-dev, libschroedinger-maeparser-dev, librsvg2-bin, libsqlite3-dev, pandoc, postgresql-server-dev-all, python-dev, python-pil, python-numpy, python-pandas, python3-sphinx, python3-recommonmark, rapidjson-dev, texlive-fonts-recommended, texlive-generic-extra, texlive-latex-base, texlive-latex-extra, texlive-latex-recommended
Filtered Build-Depends: bison, cmake, debhelper (>> 9), dh-python, doxygen, flex, imagemagick, latexmk, libboost-dev, libboost-python-dev, libboost-regex-dev, libboost-system-dev, libboost-thread-dev, libschroedinger-coordgenlibs-dev, libschroedinger-maeparser-dev, librsvg2-bin, libsqlite3-dev, pandoc, postgresql-server-dev-all, python-dev, python-pil, python-numpy, python-pandas, python3-sphinx, python3-recommonmark, rapidjson-dev, texlive-fonts-recommended, texlive-generic-extra, texlive-latex-base, texlive-latex-extra, texlive-latex-recommended
dpkg-deb: building package 'sbuild-build-depends-rdkit-dummy' in '/<<BUILDDIR>>/resolver-iQDoM9/apt_archive/sbuild-build-depends-rdkit-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy sbuild-build-depends-rdkit-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-iQDoM9/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-iQDoM9/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-iQDoM9/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-iQDoM9/apt_archive ./ Sources [701 B]
Get:5 copy:/<<BUILDDIR>>/resolver-iQDoM9/apt_archive ./ Packages [787 B]
Fetched 2821 B in 1s (3536 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install rdkit build dependencies (apt-based resolver)
-----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  e2fsprogs-l10n krb5-locales libgpg-error-l10n libnss-systemd
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
  adwaita-icon-theme autoconf automake autopoint autotools-dev binfmt-support
  bison bsdmainutils clang-7 cmake cmake-data cpp-8 dconf-gsettings-backend
  dconf-service dctrl-tools debhelper dh-autoreconf dh-python
  dh-strip-nondeterminism distro-info-data docutils-common doxygen dwz file
  flex fontconfig fontconfig-config fonts-dejavu-core fonts-lmodern g++-8
  gcc-8 gcc-8-base gettext gettext-base glib-networking glib-networking-common
  glib-networking-services groff-base gsettings-desktop-schemas
  gtk-update-icon-cache hicolor-icon-theme icu-devtools imagemagick
  imagemagick-6-common imagemagick-6.q16 intltool-debian latexmk
  libarchive-zip-perl libarchive13 libasan5 libatk-bridge2.0-0 libatk1.0-0
  libatk1.0-data libatomic1 libatspi2.0-0 libavahi-client3
  libavahi-common-data libavahi-common3 libbison-dev libblas3
  libboost-atomic1.67-dev libboost-atomic1.67.0 libboost-chrono1.67-dev
  libboost-chrono1.67.0 libboost-date-time1.67-dev libboost-date-time1.67.0
  libboost-dev libboost-python-dev libboost-python1.67-dev
  libboost-python1.67.0 libboost-regex-dev libboost-regex1.67-dev
  libboost-regex1.67.0 libboost-serialization1.67-dev
  libboost-serialization1.67.0 libboost-system-dev libboost-system1.67-dev
  libboost-system1.67.0 libboost-thread-dev libboost-thread1.67-dev
  libboost-thread1.67.0 libboost1.67-dev libbrotli1 libbsd0 libcairo-gobject2
  libcairo2 libcc1-0 libclang-common-7-dev libclang1-6.0 libclang1-7
  libcolord2 libcroco3 libcups2 libcupsimage2 libcurl4 libdatrie1 libdconf1
  libde265-0 libedit2 libelf1 libepoxy0 libexpat1-dev libffi-dev
  libfftw3-double3 libfile-stripnondeterminism-perl libfontconfig1
  libfreetype6 libfribidi0 libgc1c2 libgcc-8-dev libgcc1 libgdk-pixbuf2.0-0
  libgdk-pixbuf2.0-common libgfortran5 libglib2.0-0 libgomp1 libgraphite2-3
  libgs9 libgs9-common libgtk-3-0 libgtk-3-common libharfbuzz-icu0
  libharfbuzz0b libheif1 libice6 libicu-dev libicu63 libijs-0.35
  libimagequant0 libjbig0 libjbig2dec0 libjpeg62-turbo libjs-jquery
  libjs-sphinxdoc libjs-underscore libjson-glib-1.0-0 libjson-glib-1.0-common
  libjsoncpp1 libkpathsea6 liblapack3 liblcms2-2 libllvm6.0 libllvm7
  liblqr-1-0 libltdl7 liblua5.1-0 libmagic-mgc libmagic1 libmagickcore-6.q16-6
  libmagickwand-6.q16-6 libmpdec2 libncurses-dev libnghttp2-14 libobjc-8-dev
  libobjc4 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
  libpaper-utils libpaper1 libpipeline1 libpixman-1-0 libpotrace0 libpq-dev
  libpq5 libproxy1v5 libpsl5 libptexenc1 libpython-dev libpython-stdlib
  libpython2-dev libpython2-stdlib libpython2.7 libpython2.7-dev
  libpython2.7-minimal libpython2.7-stdlib libpython3-dev libpython3-stdlib
  libpython3.7 libpython3.7-dev libpython3.7-minimal libpython3.7-stdlib
  librest-0.7-0 librhash0 librsvg2-2 librsvg2-bin librsvg2-common librtmp1
  libschroedinger-coordgenlibs-dev libschroedinger-coordgenlibs1
  libschroedinger-maeparser-dev libschroedinger-maeparser1 libsigsegv2 libsm6
  libsoup-gnome2.4-1 libsoup2.4-1 libsqlite3-0 libsqlite3-dev libssh2-1
  libstdc++-8-dev libstdc++6 libsynctex2 libteckit0 libtexlua52 libtexlua53
  libtexluajit2 libthai-data libthai0 libtiff5 libtinfo-dev libtool libubsan1
  libuchardet0 libuv1 libwayland-client0 libwayland-cursor0 libwayland-egl1
  libwebp6 libwebpdemux2 libwebpmux3 libwoff1 libx11-6 libx11-data libx265-165
  libxapian30 libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1
  libxcomposite1 libxcursor1 libxdamage1 libxdmcp6 libxext6 libxfixes3 libxi6
  libxinerama1 libxkbcommon0 libxml2 libxmu6 libxpm4 libxrandr2 libxrender1
  libxt6 libxxhash0 libyaml-0-2 libzzip-0-13 llvm-7 llvm-7-dev llvm-7-runtime
  lsb-release m4 man-db mime-support pandoc pandoc-data po-debconf
  poppler-data postgresql-client-common postgresql-common
  postgresql-server-dev-11 postgresql-server-dev-all preview-latex-style
  python python-babel-localedata python-dateutil python-dev python-minimal
  python-numpy python-pandas python-pandas-lib python-pil python-pkg-resources
  python-six python-tz python2 python2-dev python2-minimal python2.7
  python2.7-dev python2.7-minimal python3 python3-alabaster python3-babel
  python3-certifi python3-chardet python3-commonmark-bkrs python3-dev
  python3-distutils python3-docutils python3-idna python3-imagesize
  python3-jinja2 python3-lib2to3 python3-markupsafe python3-minimal
  python3-packaging python3-pkg-resources python3-pygments python3-pyparsing
  python3-recommonmark python3-requests python3-roman python3-six
  python3-sphinx python3-tz python3-urllib3 python3.7 python3.7-dev
  python3.7-minimal rapidjson-dev sgml-base shared-mime-info sphinx-common
  ssl-cert t1utils tex-common texlive-base texlive-binaries
  texlive-fonts-recommended texlive-generic-extra texlive-latex-base
  texlive-latex-extra texlive-latex-recommended texlive-pictures
  texlive-plain-generic ucf x11-common xdg-utils xkb-data xml-core
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc bison-doc wamerican | wordlist
  whois vacation clang-7-doc cmake-doc ninja-build gcc-8-locales debtags
  dh-make doxygen-latex doxygen-doc doxygen-gui graphviz flex-doc gcc-8-doc
  libstdc++6-8-dbg libgcc1-dbg libgomp1-dbg libitm1-dbg libatomic1-dbg
  libasan5-dbg liblsan0-dbg libtsan0-dbg libubsan1-dbg libmpx2-dbg
  libquadmath0-dbg gettext-doc libasprintf-dev libgettextpo-dev groff
  imagemagick-doc autotrace cups-bsd | lpr | lprng curl enscript ffmpeg gimp
  gnuplot grads hp2xx html2ps libwmf-bin mplayer povray radiance sane-utils
  transfig ufraw-batch ghostscript lrzip libboost-doc libboost1.67-doc gccxml
  libboost-container1.67-dev libboost-context1.67-dev
  libboost-coroutine1.67-dev libboost-exception1.67-dev libboost-fiber1.67-dev
  libboost-filesystem1.67-dev libboost-graph1.67-dev
  libboost-graph-parallel1.67-dev libboost-iostreams1.67-dev
  libboost-locale1.67-dev libboost-log1.67-dev libboost-math1.67-dev
  libboost-mpi1.67-dev libboost-mpi-python1.67-dev libboost-numpy1.67-dev
  libboost-program-options1.67-dev libboost-random1.67-dev
  libboost-signals1.67-dev libboost-stacktrace1.67-dev libboost-test1.67-dev
  libboost-timer1.67-dev libboost-type-erasure1.67-dev libboost-wave1.67-dev
  libboost1.67-tools-dev libmpfrc++-dev libntl-dev colord cups-common
  libfftw3-bin libfftw3-dev gvfs icu-doc liblcms2-utils
  libmagickcore-6.q16-6-extra ncurses-doc postgresql-doc-11 sqlite3-doc
  libstdc++-8-doc libtool-doc gfortran | fortran95-compiler gcj-jdk
  xapian-tools llvm-7-doc lsb m4-doc apparmor less www-browser texlive-xetex
  texlive-luatex pandoc-citeproc context wkhtmltopdf ghc nodejs php ruby
  r-base-core libjs-mathjax node-katex libmail-box-perl poppler-utils
  fonts-japanese-mincho | fonts-ipafont-mincho fonts-japanese-gothic
  | fonts-ipafont-gothic fonts-arphic-ukai fonts-arphic-uming fonts-nanum
  libjson-perl python-doc python-tk gfortran python-pytest python-numpy-dbg
  python-numpy-doc python-pandas-doc python-pil-doc python-pil-dbg
  python-setuptools python2-doc python2.7-doc python3-doc python3-tk
  python3-venv python-commonmark-bkrs-doc docutils-doc fonts-linuxlibertine
  | ttf-linux-libertine texlive-lang-french python-jinja2-doc
  python3-setuptools python-pygments-doc ttf-bitstream-vera
  python-pyparsing-doc python3-cryptography python3-openssl python3-socks
  dvipng python3-sphinx-rtd-theme python3-stemmer sphinx-doc python3.7-venv
  python3.7-doc sgml-base-doc openssl-blacklist gv | postscript-viewer perl-tk
  xpdf-reader | pdf-viewer texlive-fonts-recommended-doc
  texlive-latex-base-doc python-pygments icc-profiles libfile-which-perl
  libspreadsheet-parseexcel-perl texlive-latex-extra-doc
  texlive-latex-recommended-doc texlive-pstricks dot2tex prerex ruby-tcltk
  | libtcltk-ruby texlive-pictures-doc vprerex
Recommended packages:
  libomp-7-dev libfl-dev curl | wget | lynx libmagickcore-6.q16-6-extra
  ghostscript netpbm xpdf-reader | pdf-viewer gv | postscript-viewer
  at-spi2-core libcupsfilters1 libarchive-cpio-perl libgdk-pixbuf2.0-bin
  libglib2.0-data xdg-user-dirs fonts-droid-fallback libgtk-3-bin
  javascript-common gsfonts publicsuffix libltdl-dev libmail-sendmail-perl
  logrotate python-scipy python-matplotlib python-tables python-numexpr
  python-xlrd python-statsmodels python-openpyxl python-xlwt python-bs4
  python-html5lib python-lxml python-olefile python3-pil lmodern tex-gyre tipa
  ruby | ruby-interpreter tk libfile-mimeinfo-perl libnet-dbus-perl
  libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
  adwaita-icon-theme autoconf automake autopoint autotools-dev binfmt-support
  bison bsdmainutils clang-7 cmake cmake-data dconf-gsettings-backend
  dconf-service dctrl-tools debhelper dh-autoreconf dh-python
  dh-strip-nondeterminism distro-info-data docutils-common doxygen dwz file
  flex fontconfig fontconfig-config fonts-dejavu-core fonts-lmodern gettext
  gettext-base glib-networking glib-networking-common glib-networking-services
  groff-base gsettings-desktop-schemas gtk-update-icon-cache
  hicolor-icon-theme icu-devtools imagemagick imagemagick-6-common
  imagemagick-6.q16 intltool-debian latexmk libarchive-zip-perl libarchive13
  libatk-bridge2.0-0 libatk1.0-0 libatk1.0-data libatspi2.0-0 libavahi-client3
  libavahi-common-data libavahi-common3 libbison-dev libblas3
  libboost-atomic1.67-dev libboost-atomic1.67.0 libboost-chrono1.67-dev
  libboost-chrono1.67.0 libboost-date-time1.67-dev libboost-date-time1.67.0
  libboost-dev libboost-python-dev libboost-python1.67-dev
  libboost-python1.67.0 libboost-regex-dev libboost-regex1.67-dev
  libboost-regex1.67.0 libboost-serialization1.67-dev
  libboost-serialization1.67.0 libboost-system-dev libboost-system1.67-dev
  libboost-system1.67.0 libboost-thread-dev libboost-thread1.67-dev
  libboost-thread1.67.0 libboost1.67-dev libbrotli1 libbsd0 libcairo-gobject2
  libcairo2 libclang-common-7-dev libclang1-6.0 libclang1-7 libcolord2
  libcroco3 libcups2 libcupsimage2 libcurl4 libdatrie1 libdconf1 libde265-0
  libedit2 libelf1 libepoxy0 libexpat1-dev libffi-dev libfftw3-double3
  libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libfribidi0
  libgc1c2 libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgfortran5
  libglib2.0-0 libgraphite2-3 libgs9 libgs9-common libgtk-3-0 libgtk-3-common
  libharfbuzz-icu0 libharfbuzz0b libheif1 libice6 libicu-dev libicu63
  libijs-0.35 libimagequant0 libjbig0 libjbig2dec0 libjpeg62-turbo
  libjs-jquery libjs-sphinxdoc libjs-underscore libjson-glib-1.0-0
  libjson-glib-1.0-common libjsoncpp1 libkpathsea6 liblapack3 liblcms2-2
  libllvm6.0 libllvm7 liblqr-1-0 libltdl7 liblua5.1-0 libmagic-mgc libmagic1
  libmagickcore-6.q16-6 libmagickwand-6.q16-6 libmpdec2 libncurses-dev
  libnghttp2-14 libobjc-8-dev libobjc4 libopenjp2-7 libpango-1.0-0
  libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1 libpipeline1
  libpixman-1-0 libpotrace0 libpq-dev libpq5 libproxy1v5 libpsl5 libptexenc1
  libpython-dev libpython-stdlib libpython2-dev libpython2-stdlib libpython2.7
  libpython2.7-dev libpython2.7-minimal libpython2.7-stdlib libpython3-dev
  libpython3-stdlib libpython3.7 libpython3.7-dev libpython3.7-minimal
  libpython3.7-stdlib librest-0.7-0 librhash0 librsvg2-2 librsvg2-bin
  librsvg2-common librtmp1 libschroedinger-coordgenlibs-dev
  libschroedinger-coordgenlibs1 libschroedinger-maeparser-dev
  libschroedinger-maeparser1 libsigsegv2 libsm6 libsoup-gnome2.4-1
  libsoup2.4-1 libsqlite3-dev libssh2-1 libsynctex2 libteckit0 libtexlua52
  libtexlua53 libtexluajit2 libthai-data libthai0 libtiff5 libtinfo-dev
  libtool libuchardet0 libuv1 libwayland-client0 libwayland-cursor0
  libwayland-egl1 libwebp6 libwebpdemux2 libwebpmux3 libwoff1 libx11-6
  libx11-data libx265-165 libxapian30 libxau6 libxaw7 libxcb-render0
  libxcb-shm0 libxcb1 libxcomposite1 libxcursor1 libxdamage1 libxdmcp6
  libxext6 libxfixes3 libxi6 libxinerama1 libxkbcommon0 libxml2 libxmu6
  libxpm4 libxrandr2 libxrender1 libxt6 libxxhash0 libyaml-0-2 libzzip-0-13
  llvm-7 llvm-7-dev llvm-7-runtime lsb-release m4 man-db mime-support pandoc
  pandoc-data po-debconf poppler-data postgresql-client-common
  postgresql-common postgresql-server-dev-11 postgresql-server-dev-all
  preview-latex-style python python-babel-localedata python-dateutil
  python-dev python-minimal python-numpy python-pandas python-pandas-lib
  python-pil python-pkg-resources python-six python-tz python2 python2-dev
  python2-minimal python2.7 python2.7-dev python2.7-minimal python3
  python3-alabaster python3-babel python3-certifi python3-chardet
  python3-commonmark-bkrs python3-dev python3-distutils python3-docutils
  python3-idna python3-imagesize python3-jinja2 python3-lib2to3
  python3-markupsafe python3-minimal python3-packaging python3-pkg-resources
  python3-pygments python3-pyparsing python3-recommonmark python3-requests
  python3-roman python3-six python3-sphinx python3-tz python3-urllib3
  python3.7 python3.7-dev python3.7-minimal rapidjson-dev
  sbuild-build-depends-rdkit-dummy sgml-base shared-mime-info sphinx-common
  ssl-cert t1utils tex-common texlive-base texlive-binaries
  texlive-fonts-recommended texlive-generic-extra texlive-latex-base
  texlive-latex-extra texlive-latex-recommended texlive-pictures
  texlive-plain-generic ucf x11-common xdg-utils xkb-data xml-core
The following packages will be upgraded:
  cpp-8 g++-8 gcc-8 gcc-8-base libasan5 libatomic1 libcc1-0 libgcc-8-dev
  libgcc1 libgomp1 libsqlite3-0 libstdc++-8-dev libstdc++6 libubsan1
14 upgraded, 320 newly installed, 0 to remove and 2 not upgraded.
Need to get 414 MB/417 MB of archives.
After this operation, 1556 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-iQDoM9/apt_archive ./ sbuild-build-depends-rdkit-dummy 0.invalid.0 [1068 B]
Get:2 http://172.17.0.1/private buster-staging/main armhf libbsd0 armhf 0.9.1-1 [104 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:4 http://172.17.0.1/private buster-staging/main armhf libcc1-0 armhf 8.2.0-15+rpi1 [37.9 kB]
Get:5 http://172.17.0.1/private buster-staging/main armhf gcc-8-base armhf 8.2.0-15+rpi1 [189 kB]
Get:6 http://172.17.0.1/private buster-staging/main armhf libgcc1 armhf 1:8.2.0-15+rpi1 [36.6 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf libgomp1 armhf 8.2.0-15+rpi1 [64.3 kB]
Get:8 http://172.17.0.1/private buster-staging/main armhf libatomic1 armhf 8.2.0-15+rpi1 [8104 B]
Get:9 http://172.17.0.1/private buster-staging/main armhf libasan5 armhf 8.2.0-15+rpi1 [318 kB]
Get:10 http://172.17.0.1/private buster-staging/main armhf libubsan1 armhf 8.2.0-15+rpi1 [104 kB]
Get:11 http://172.17.0.1/private buster-staging/main armhf g++-8 armhf 8.2.0-15+rpi1 [7459 kB]
Get:12 http://172.17.0.1/private buster-staging/main armhf libstdc++-8-dev armhf 8.2.0-15+rpi1 [1568 kB]
Get:13 http://172.17.0.1/private buster-staging/main armhf libgcc-8-dev armhf 8.2.0-15+rpi1 [3750 kB]
Get:14 http://172.17.0.1/private buster-staging/main armhf gcc-8 armhf 8.2.0-15+rpi1 [7213 kB]
Get:15 http://172.17.0.1/private buster-staging/main armhf cpp-8 armhf 8.2.0-15+rpi1 [6788 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf libstdc++6 armhf 8.2.0-15+rpi1 [325 kB]
Get:17 http://172.17.0.1/private buster-staging/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB]
Get:18 http://172.17.0.1/private buster-staging/main armhf groff-base armhf 1.22.4-2 [782 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.5.1-1 [26.6 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.8.5-1 [1231 kB]
Get:21 http://172.17.0.1/private buster-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:22 http://172.17.0.1/private buster-staging/main armhf m4 armhf 1.4.18-2 [185 kB]
Get:23 http://172.17.0.1/private buster-staging/main armhf flex armhf 2.6.4-6.2 [427 kB]
Get:24 http://172.17.0.1/private buster-staging/main armhf libfftw3-double3 armhf 3.3.8-2 [429 kB]
Get:25 http://172.17.0.1/private buster-staging/main armhf libfreetype6 armhf 2.9.1-3 [318 kB]
Get:26 http://172.17.0.1/private buster-staging/main armhf ucf all 3.0038+nmu1 [69.0 kB]
Get:27 http://172.17.0.1/private buster-staging/main armhf fontconfig-config all 2.13.1-2 [280 kB]
Get:28 http://172.17.0.1/private buster-staging/main armhf libfontconfig1 armhf 2.13.1-2 [327 kB]
Get:29 http://172.17.0.1/private buster-staging/main armhf libde265-0 armhf 1.0.3-1+rpi1+b9 [180 kB]
Get:30 http://172.17.0.1/private buster-staging/main armhf libx265-165 armhf 2.9-4 [517 kB]
Get:31 http://172.17.0.1/private buster-staging/main armhf libheif1 armhf 1.3.2-1+b1 [106 kB]
Get:32 http://172.17.0.1/private buster-staging/main armhf liblcms2-2 armhf 2.9-3 [116 kB]
Get:33 http://172.17.0.1/private buster-staging/main armhf libglib2.0-0 armhf 2.58.2-3 [1076 kB]
Get:34 http://172.17.0.1/private buster-staging/main armhf liblqr-1-0 armhf 0.4.2-2.1 [23.1 kB]
Get:35 http://172.17.0.1/private buster-staging/main armhf libltdl7 armhf 2.4.6-9 [387 kB]
Get:36 http://172.17.0.1/private buster-staging/main armhf libopenjp2-7 armhf 2.3.0-1.1 [137 kB]
Get:37 http://172.17.0.1/private buster-staging/main armhf libtiff5 armhf 4.0.10-3 [235 kB]
Get:38 http://172.17.0.1/private buster-staging/main armhf libxcb1 armhf 1.13.1-2 [132 kB]
Get:39 http://172.17.0.1/private buster-staging/main armhf libx11-data all 2:1.6.7-1 [298 kB]
Get:40 http://172.17.0.1/private buster-staging/main armhf libx11-6 armhf 2:1.6.7-1 [689 kB]
Get:41 http://172.17.0.1/private buster-staging/main armhf libicu63 armhf 63.1-6 [7973 kB]
Get:42 http://172.17.0.1/private buster-staging/main armhf libxml2 armhf 2.9.4+dfsg1-7+b1 [570 kB]
Get:43 http://172.17.0.1/private buster-staging/main armhf imagemagick-6-common all 8:6.9.10.23+dfsg-2 [200 kB]
Get:44 http://172.17.0.1/private buster-staging/main armhf libmagickcore-6.q16-6 armhf 8:6.9.10.23+dfsg-2 [1598 kB]
Get:45 http://172.17.0.1/private buster-staging/main armhf libmagickwand-6.q16-6 armhf 8:6.9.10.23+dfsg-2 [423 kB]
Get:46 http://172.17.0.1/private buster-staging/main armhf poppler-data all 0.4.9-2 [1473 kB]
Get:47 http://172.17.0.1/private buster-staging/main armhf libpython2.7-minimal armhf 2.7.15-5 [394 kB]
Get:48 http://172.17.0.1/private buster-staging/main armhf python2.7-minimal armhf 2.7.15-5 [1089 kB]
Get:49 http://172.17.0.1/private buster-staging/main armhf python2-minimal armhf 2.7.15-4 [41.4 kB]
Get:50 http://172.17.0.1/private buster-staging/main armhf python-minimal armhf 2.7.15-4 [21.0 kB]
Get:51 http://172.17.0.1/private buster-staging/main armhf mime-support all 3.61 [37.1 kB]
Get:52 http://172.17.0.1/private buster-staging/main armhf libsqlite3-0 armhf 3.26.0+fossilbc891ac6b-2 [545 kB]
Get:53 http://172.17.0.1/private buster-staging/main armhf libpython2.7-stdlib armhf 2.7.15-5 [1844 kB]
Get:54 http://172.17.0.1/private buster-staging/main armhf python2.7 armhf 2.7.15-5 [299 kB]
Get:55 http://172.17.0.1/private buster-staging/main armhf libpython2-stdlib armhf 2.7.15-4 [20.8 kB]
Get:56 http://172.17.0.1/private buster-staging/main armhf libpython-stdlib armhf 2.7.15-4 [20.8 kB]
Get:57 http://172.17.0.1/private buster-staging/main armhf python2 armhf 2.7.15-4 [41.6 kB]
Get:58 http://172.17.0.1/private buster-staging/main armhf python armhf 2.7.15-4 [22.8 kB]
Get:59 http://172.17.0.1/private buster-staging/main armhf libpython3.7-minimal armhf 3.7.2-1 [582 kB]
Get:60 http://172.17.0.1/private buster-staging/main armhf python3.7-minimal armhf 3.7.2-1 [1454 kB]
Get:61 http://172.17.0.1/private buster-staging/main armhf python3-minimal armhf 3.7.2-1 [36.6 kB]
Get:62 http://172.17.0.1/private buster-staging/main armhf libmpdec2 armhf 2.4.2-2 [67.2 kB]
Get:63 http://172.17.0.1/private buster-staging/main armhf libpython3.7-stdlib armhf 3.7.2-1 [1663 kB]
Get:64 http://172.17.0.1/private buster-staging/main armhf python3.7 armhf 3.7.2-1 [323 kB]
Get:65 http://172.17.0.1/private buster-staging/main armhf libpython3-stdlib armhf 3.7.2-1 [20.0 kB]
Get:66 http://172.17.0.1/private buster-staging/main armhf python3 armhf 3.7.2-1 [61.5 kB]
Get:67 http://172.17.0.1/private buster-staging/main armhf sgml-base all 1.29 [14.8 kB]
Get:68 http://172.17.0.1/private buster-staging/main armhf tex-common all 6.10 [53.0 kB]
Get:69 http://172.17.0.1/private buster-staging/main armhf libmagic-mgc armhf 1:5.35-2 [242 kB]
Get:70 http://172.17.0.1/private buster-staging/main armhf libmagic1 armhf 1:5.35-2 [109 kB]
Get:71 http://172.17.0.1/private buster-staging/main armhf file armhf 1:5.35-2 [65.1 kB]
Get:72 http://172.17.0.1/private buster-staging/main armhf gettext-base armhf 0.19.8.1-9 [117 kB]
Get:73 http://172.17.0.1/private buster-staging/main armhf libgc1c2 armhf 1:7.6.4-0.4 [212 kB]
Get:74 http://172.17.0.1/private buster-staging/main armhf hicolor-icon-theme all 0.17-2 [11.4 kB]
Get:75 http://172.17.0.1/private buster-staging/main armhf shared-mime-info armhf 1.10-1 [762 kB]
Get:76 http://172.17.0.1/private buster-staging/main armhf libgdk-pixbuf2.0-common all 2.38.0+dfsg-7 [315 kB]
Get:77 http://172.17.0.1/private buster-staging/main armhf libgdk-pixbuf2.0-0 armhf 2.38.0+dfsg-7 [158 kB]
Get:78 http://172.17.0.1/private buster-staging/main armhf gtk-update-icon-cache armhf 3.24.4-1 [80.4 kB]
Get:79 http://172.17.0.1/private buster-staging/main armhf libpixman-1-0 armhf 0.36.0-1 [458 kB]
Get:80 http://172.17.0.1/private buster-staging/main armhf libxcb-render0 armhf 1.13.1-2 [108 kB]
Get:81 http://172.17.0.1/private buster-staging/main armhf libxcb-shm0 armhf 1.13.1-2 [99.3 kB]
Get:82 http://172.17.0.1/private buster-staging/main armhf libcairo2 armhf 1.16.0-2 [602 kB]
Get:83 http://172.17.0.1/private buster-staging/main armhf libcroco3 armhf 0.6.12-3 [132 kB]
Get:84 http://172.17.0.1/private buster-staging/main armhf fontconfig armhf 2.13.1-2 [404 kB]
Get:85 http://172.17.0.1/private buster-staging/main armhf libfribidi0 armhf 1.0.5-3.1 [62.1 kB]
Get:86 http://172.17.0.1/private buster-staging/main armhf libthai-data all 0.1.28-1 [170 kB]
Get:87 http://172.17.0.1/private buster-staging/main armhf libdatrie1 armhf 0.2.12-1 [35.8 kB]
Get:88 http://172.17.0.1/private buster-staging/main armhf libthai0 armhf 0.1.28-1 [50.9 kB]
Get:89 http://172.17.0.1/private buster-staging/main armhf libpango-1.0-0 armhf 1.42.4-6 [168 kB]
Get:90 http://172.17.0.1/private buster-staging/main armhf libgraphite2-3 armhf 1.3.13-7 [69.6 kB]
Get:91 http://172.17.0.1/private buster-staging/main armhf libharfbuzz0b armhf 2.3.0-1 [1130 kB]
Get:92 http://172.17.0.1/private buster-staging/main armhf libpangoft2-1.0-0 armhf 1.42.4-6 [61.9 kB]
Get:93 http://172.17.0.1/private buster-staging/main armhf libpangocairo-1.0-0 armhf 1.42.4-6 [51.6 kB]
Get:94 http://172.17.0.1/private buster-staging/main armhf librsvg2-2 armhf 2.44.10-1+rpi1 [958 kB]
Get:95 http://172.17.0.1/private buster-staging/main armhf librsvg2-common armhf 2.44.10-1+rpi1 [22.8 kB]
Get:96 http://172.17.0.1/private buster-staging/main armhf adwaita-icon-theme all 3.30.1-1 [11.7 MB]
Get:97 http://172.17.0.1/private buster-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:98 http://172.17.0.1/private buster-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:99 http://172.17.0.1/private buster-staging/main armhf automake all 1:1.16.1-4 [771 kB]
Get:100 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-9 [434 kB]
Get:101 http://172.17.0.1/private buster-staging/main armhf binfmt-support armhf 2.2.0-1 [56.7 kB]
Get:102 http://172.17.0.1/private buster-staging/main armhf libbison-dev armhf 2:3.2.4.dfsg-1 [475 kB]
Get:103 http://172.17.0.1/private buster-staging/main armhf bison armhf 2:3.2.4.dfsg-1 [803 kB]
Get:104 http://172.17.0.1/private buster-staging/main armhf libedit2 armhf 3.1-20181209-1 [78.7 kB]
Get:105 http://172.17.0.1/private buster-staging/main armhf libllvm7 armhf 1:7.0.1-4+rpi1 [11.2 MB]
Get:106 http://172.17.0.1/private buster-staging/main armhf libobjc4 armhf 8.2.0-15+rpi1 [42.9 kB]
Get:107 http://172.17.0.1/private buster-staging/main armhf libobjc-8-dev armhf 8.2.0-15+rpi1 [204 kB]
Get:108 http://172.17.0.1/private buster-staging/main armhf libclang-common-7-dev armhf 1:7.0.1-4+rpi1 [1335 kB]
Get:109 http://172.17.0.1/private buster-staging/main armhf libclang1-7 armhf 1:7.0.1-4+rpi1 [4954 kB]
Get:110 http://172.17.0.1/private buster-staging/main armhf clang-7 armhf 1:7.0.1-4+rpi1 [6663 kB]
Get:111 http://172.17.0.1/private buster-staging/main armhf cmake-data all 3.13.2-1 [1476 kB]
Get:112 http://172.17.0.1/private buster-staging/main armhf libarchive13 armhf 3.3.3-3 [269 kB]
Get:113 http://172.17.0.1/private buster-staging/main armhf libnghttp2-14 armhf 1.36.0-1 [73.6 kB]
Get:114 http://172.17.0.1/private buster-staging/main armhf libpsl5 armhf 0.20.2-2 [52.6 kB]
Get:115 http://172.17.0.1/private buster-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2 [54.0 kB]
Get:116 http://172.17.0.1/private buster-staging/main armhf libssh2-1 armhf 1.8.0-2 [125 kB]
Get:117 http://172.17.0.1/private buster-staging/main armhf libcurl4 armhf 7.63.0-1 [290 kB]
Get:118 http://172.17.0.1/private buster-staging/main armhf librhash0 armhf 1.3.7-1 [113 kB]
Get:119 http://172.17.0.1/private buster-staging/main armhf libuv1 armhf 1.24.1-1 [96.7 kB]
Get:120 http://172.17.0.1/private buster-staging/main armhf cmake armhf 3.13.2-1 [2563 kB]
Get:121 http://172.17.0.1/private buster-staging/main armhf libdconf1 armhf 0.30.1-2 [36.3 kB]
Get:122 http://172.17.0.1/private buster-staging/main armhf dconf-service armhf 0.30.1-2 [33.3 kB]
Get:123 http://172.17.0.1/private buster-staging/main armhf dconf-gsettings-backend armhf 0.30.1-2 [24.7 kB]
Get:124 http://172.17.0.1/private buster-staging/main armhf dctrl-tools armhf 2.24-3 [94.2 kB]
Get:125 http://172.17.0.1/private buster-staging/main armhf libtool all 2.4.6-9 [547 kB]
Get:126 http://172.17.0.1/private buster-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:127 http://172.17.0.1/private buster-staging/main armhf libarchive-zip-perl all 1.64-1 [96.8 kB]
Get:128 http://172.17.0.1/private buster-staging/main armhf libfile-stripnondeterminism-perl all 1.1.0-1 [19.5 kB]
Get:129 http://172.17.0.1/private buster-staging/main armhf dh-strip-nondeterminism all 1.1.0-1 [12.6 kB]
Get:130 http://172.17.0.1/private buster-staging/main armhf libelf1 armhf 0.175-2 [157 kB]
Get:131 http://172.17.0.1/private buster-staging/main armhf dwz armhf 0.12-3 [66.0 kB]
Get:132 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-9 [1219 kB]
Get:133 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:134 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:135 http://172.17.0.1/private buster-staging/main armhf debhelper all 12 [1002 kB]
Get:136 http://172.17.0.1/private buster-staging/main armhf python3-lib2to3 all 3.7.2-3 [76.7 kB]
Get:137 http://172.17.0.1/private buster-staging/main armhf python3-distutils all 3.7.2-3 [142 kB]
Get:138 http://172.17.0.1/private buster-staging/main armhf dh-python all 3.20180927 [95.8 kB]
Get:139 http://172.17.0.1/private buster-staging/main armhf distro-info-data all 0.39 [6272 B]
Get:140 http://172.17.0.1/private buster-staging/main armhf xml-core all 0.18 [23.4 kB]
Get:141 http://172.17.0.1/private buster-staging/main armhf docutils-common all 0.14+dfsg-3 [204 kB]
Get:142 http://172.17.0.1/private buster-staging/main armhf libllvm6.0 armhf 1:6.0.1-10+rpi1 [12.5 MB]
Get:143 http://172.17.0.1/private buster-staging/main armhf libclang1-6.0 armhf 1:6.0.1-10+rpi1 [5679 kB]
Get:144 http://172.17.0.1/private buster-staging/main armhf libxapian30 armhf 1.4.9-1 [955 kB]
Get:145 http://172.17.0.1/private buster-staging/main armhf doxygen armhf 1.8.13-10 [3257 kB]
Get:146 http://172.17.0.1/private buster-staging/main armhf fonts-lmodern all 2.004.5-5 [4539 kB]
Get:147 http://172.17.0.1/private buster-staging/main armhf libproxy1v5 armhf 0.4.15-5 [49.8 kB]
Get:148 http://172.17.0.1/private buster-staging/main armhf glib-networking-common all 2.58.0-2 [59.3 kB]
Get:149 http://172.17.0.1/private buster-staging/main armhf glib-networking-services armhf 2.58.0-2 [13.0 kB]
Get:150 http://172.17.0.1/private buster-staging/main armhf gsettings-desktop-schemas all 3.28.1-1 [529 kB]
Get:151 http://172.17.0.1/private buster-staging/main armhf glib-networking armhf 2.58.0-2 [47.7 kB]
Get:152 http://172.17.0.1/private buster-staging/main armhf icu-devtools armhf 63.1-6 [163 kB]
Get:153 http://172.17.0.1/private buster-staging/main armhf imagemagick-6.q16 armhf 8:6.9.10.23+dfsg-2 [580 kB]
Get:154 http://172.17.0.1/private buster-staging/main armhf imagemagick armhf 8:6.9.10.23+dfsg-2 [155 kB]
Get:155 http://172.17.0.1/private buster-staging/main armhf libpaper1 armhf 1.1.26 [20.0 kB]
Get:156 http://172.17.0.1/private buster-staging/main armhf libpaper-utils armhf 1.1.26 [17.5 kB]
Get:157 http://172.17.0.1/private buster-staging/main armhf libkpathsea6 armhf 2018.20181218.49446-1 [157 kB]
Get:158 http://172.17.0.1/private buster-staging/main armhf libptexenc1 armhf 2018.20181218.49446-1 [58.2 kB]
Get:159 http://172.17.0.1/private buster-staging/main armhf libsynctex2 armhf 2018.20181218.49446-1 [67.3 kB]
Get:160 http://172.17.0.1/private buster-staging/main armhf libtexlua52 armhf 2018.20181218.49446-1 [86.9 kB]
Get:161 http://172.17.0.1/private buster-staging/main armhf libtexlua53 armhf 2018.20181218.49446-1 [97.9 kB]
Get:162 http://172.17.0.1/private buster-staging/main armhf libtexluajit2 armhf 2018.20181218.49446-1 [204 kB]
Get:163 http://172.17.0.1/private buster-staging/main armhf t1utils armhf 1.41-3 [52.1 kB]
Get:164 http://172.17.0.1/private buster-staging/main armhf libbrotli1 armhf 1.0.7-2 [269 kB]
Get:165 http://172.17.0.1/private buster-staging/main armhf libgs9-common all 9.26a~dfsg-2 [5136 kB]
Get:166 http://172.17.0.1/private buster-staging/main armhf libavahi-common-data armhf 0.7-4+b1 [122 kB]
Get:167 http://172.17.0.1/private buster-staging/main armhf libavahi-common3 armhf 0.7-4+b1 [51.1 kB]
Get:168 http://172.17.0.1/private buster-staging/main armhf libavahi-client3 armhf 0.7-4+b1 [54.0 kB]
Get:169 http://172.17.0.1/private buster-staging/main armhf libcups2 armhf 2.2.10-3+b2 [287 kB]
Get:170 http://172.17.0.1/private buster-staging/main armhf libcupsimage2 armhf 2.2.10-3+b2 [130 kB]
Get:171 http://172.17.0.1/private buster-staging/main armhf libijs-0.35 armhf 0.35-13 [16.7 kB]
Get:172 http://172.17.0.1/private buster-staging/main armhf libjbig2dec0 armhf 0.15-2 [53.3 kB]
Get:173 http://172.17.0.1/private buster-staging/main armhf libgs9 armhf 9.26a~dfsg-2 [1842 kB]
Get:174 http://172.17.0.1/private buster-staging/main armhf libharfbuzz-icu0 armhf 2.3.0-1 [817 kB]
Get:175 http://172.17.0.1/private buster-staging/main armhf libpotrace0 armhf 1.15-1 [23.9 kB]
Get:176 http://172.17.0.1/private buster-staging/main armhf libteckit0 armhf 2.5.8+ds2-5 [245 kB]
Get:177 http://172.17.0.1/private buster-staging/main armhf libwoff1 armhf 1.0.2-1 [36.1 kB]
Get:178 http://172.17.0.1/private buster-staging/main armhf libxmu6 armhf 2:1.1.2-2 [52.0 kB]
Get:179 http://172.17.0.1/private buster-staging/main armhf libxaw7 armhf 2:1.0.13-1 [164 kB]
Get:180 http://172.17.0.1/private buster-staging/main armhf libxxhash0 armhf 0.6.5-2 [10.0 kB]
Get:181 http://172.17.0.1/private buster-staging/main armhf libzzip-0-13 armhf 0.13.62-3.1 [51.5 kB]
Get:182 http://172.17.0.1/private buster-staging/main armhf texlive-binaries armhf 2018.20181218.49446-1 [7807 kB]
Get:183 http://172.17.0.1/private buster-staging/main armhf xdg-utils all 1.1.3-1 [73.3 kB]
Get:184 http://172.17.0.1/private buster-staging/main armhf texlive-base all 2018.20190126-1 [19.7 MB]
Get:185 http://172.17.0.1/private buster-staging/main armhf texlive-latex-base all 2018.20190126-1 [985 kB]
Get:186 http://172.17.0.1/private buster-staging/main armhf latexmk all 1:4.61-0.1 [390 kB]
Get:187 http://172.17.0.1/private buster-staging/main armhf libatk1.0-data all 2.30.0-2 [145 kB]
Get:188 http://172.17.0.1/private buster-staging/main armhf libatk1.0-0 armhf 2.30.0-2 [42.7 kB]
Get:189 http://172.17.0.1/private buster-staging/main armhf libatspi2.0-0 armhf 2.30.0-5 [54.2 kB]
Get:190 http://172.17.0.1/private buster-staging/main armhf libatk-bridge2.0-0 armhf 2.30.0-2 [50.9 kB]
Get:191 http://172.17.0.1/private buster-staging/main armhf libgfortran5 armhf 8.2.0-15+rpi1 [206 kB]
Get:192 http://172.17.0.1/private buster-staging/main armhf libblas3 armhf 3.8.0-2 [103 kB]
Get:193 http://172.17.0.1/private buster-staging/main armhf libboost1.67-dev armhf 1.67.0-12 [8386 kB]
Get:194 http://172.17.0.1/private buster-staging/main armhf libboost-atomic1.67.0 armhf 1.67.0-12 [226 kB]
Get:195 http://172.17.0.1/private buster-staging/main armhf libboost-atomic1.67-dev armhf 1.67.0-12 [225 kB]
Get:196 http://172.17.0.1/private buster-staging/main armhf libboost-system1.67.0 armhf 1.67.0-12 [228 kB]
Get:197 http://172.17.0.1/private buster-staging/main armhf libboost-chrono1.67.0 armhf 1.67.0-12 [231 kB]
Get:198 http://172.17.0.1/private buster-staging/main armhf libboost-chrono1.67-dev armhf 1.67.0-12 [233 kB]
Get:199 http://172.17.0.1/private buster-staging/main armhf libboost-date-time1.67.0 armhf 1.67.0-12 [236 kB]
Get:200 http://172.17.0.1/private buster-staging/main armhf libboost-serialization1.67.0 armhf 1.67.0-12 [300 kB]
Get:201 http://172.17.0.1/private buster-staging/main armhf libboost-serialization1.67-dev armhf 1.67.0-12 [365 kB]
Get:202 http://172.17.0.1/private buster-staging/main armhf libboost-date-time1.67-dev armhf 1.67.0-12 [247 kB]
Get:203 http://172.17.0.1/private buster-staging/main armhf libboost-dev armhf 1.67.0.1+b1 [4140 B]
Get:204 http://172.17.0.1/private buster-staging/main armhf libboost-python1.67.0 armhf 1.67.0-12 [307 kB]
Get:205 http://172.17.0.1/private buster-staging/main armhf libpython2.7 armhf 2.7.15-5 [871 kB]
Get:206 http://172.17.0.1/private buster-staging/main armhf libexpat1-dev armhf 2.2.6-1 [127 kB]
Get:207 http://172.17.0.1/private buster-staging/main armhf libpython2.7-dev armhf 2.7.15-5 [30.8 MB]
Get:208 http://172.17.0.1/private buster-staging/main armhf libpython2-dev armhf 2.7.15-4 [20.9 kB]
Get:209 http://172.17.0.1/private buster-staging/main armhf libpython-dev armhf 2.7.15-4 [20.9 kB]
Get:210 http://172.17.0.1/private buster-staging/main armhf python2.7-dev armhf 2.7.15-5 [289 kB]
Get:211 http://172.17.0.1/private buster-staging/main armhf python2-dev armhf 2.7.15-4 [1212 B]
Get:212 http://172.17.0.1/private buster-staging/main armhf python-dev armhf 2.7.15-4 [1188 B]
Get:213 http://172.17.0.1/private buster-staging/main armhf libpython3.7 armhf 3.7.2-1 [1253 kB]
Get:214 http://172.17.0.1/private buster-staging/main armhf libpython3.7-dev armhf 3.7.2-1 [47.2 MB]
Get:215 http://172.17.0.1/private buster-staging/main armhf libpython3-dev armhf 3.7.2-1 [20.1 kB]
Get:216 http://172.17.0.1/private buster-staging/main armhf python3.7-dev armhf 3.7.2-1 [510 kB]
Get:217 http://172.17.0.1/private buster-staging/main armhf python3-dev armhf 3.7.2-1 [1260 B]
Get:218 http://172.17.0.1/private buster-staging/main armhf libboost-python1.67-dev armhf 1.67.0-12 [319 kB]
Get:219 http://172.17.0.1/private buster-staging/main armhf libboost-python-dev armhf 1.67.0.1+b1 [4224 B]
Get:220 http://172.17.0.1/private buster-staging/main armhf libboost-regex1.67.0 armhf 1.67.0-12 [430 kB]
Get:221 http://172.17.0.1/private buster-staging/main armhf libicu-dev armhf 63.1-6 [8841 kB]
Get:222 http://172.17.0.1/private buster-staging/main armhf libboost-regex1.67-dev armhf 1.67.0-12 [527 kB]
Get:223 http://172.17.0.1/private buster-staging/main armhf libboost-regex-dev armhf 1.67.0.1+b1 [4192 B]
Get:224 http://172.17.0.1/private buster-staging/main armhf libboost-system1.67-dev armhf 1.67.0-12 [230 kB]
Get:225 http://172.17.0.1/private buster-staging/main armhf libboost-system-dev armhf 1.67.0.1+b1 [4060 B]
Get:226 http://172.17.0.1/private buster-staging/main armhf libboost-thread1.67.0 armhf 1.67.0-12 [260 kB]
Get:227 http://172.17.0.1/private buster-staging/main armhf libboost-thread1.67-dev armhf 1.67.0-12 [267 kB]
Get:228 http://172.17.0.1/private buster-staging/main armhf libboost-thread-dev armhf 1.67.0.1+b1 [3952 B]
Get:229 http://172.17.0.1/private buster-staging/main armhf libcairo-gobject2 armhf 1.16.0-2 [123 kB]
Get:230 http://172.17.0.1/private buster-staging/main armhf libcolord2 armhf 1.4.3-4 [119 kB]
Get:231 http://172.17.0.1/private buster-staging/main armhf libepoxy0 armhf 1.5.3-0.1 [167 kB]
Get:232 http://172.17.0.1/private buster-staging/main armhf libffi-dev armhf 3.2.1-9 [159 kB]
Get:233 http://172.17.0.1/private buster-staging/main armhf libjson-glib-1.0-common all 1.4.4-2 [52.3 kB]
Get:234 http://172.17.0.1/private buster-staging/main armhf libjson-glib-1.0-0 armhf 1.4.4-2 [52.7 kB]
Get:235 http://172.17.0.1/private buster-staging/main armhf libsoup2.4-1 armhf 2.64.2-2 [216 kB]
Get:236 http://172.17.0.1/private buster-staging/main armhf libsoup-gnome2.4-1 armhf 2.64.2-2 [17.5 kB]
Get:237 http://172.17.0.1/private buster-staging/main armhf librest-0.7-0 armhf 0.8.1-1 [27.8 kB]
Get:238 http://172.17.0.1/private buster-staging/main armhf libwayland-client0 armhf 1.16.0-1 [21.2 kB]
Get:239 http://172.17.0.1/private buster-staging/main armhf libwayland-cursor0 armhf 1.16.0-1 [13.0 kB]
Get:240 http://172.17.0.1/private buster-staging/main armhf libwayland-egl1 armhf 1.16.0-1 [8008 B]
Get:241 http://172.17.0.1/private buster-staging/main armhf libxcursor1 armhf 1:1.1.15-2 [33.5 kB]
Get:242 http://172.17.0.1/private buster-staging/main armhf libxinerama1 armhf 2:1.1.4-1 [16.2 kB]
Get:243 http://172.17.0.1/private buster-staging/main armhf xkb-data all 2.23.1-1 [675 kB]
Get:244 http://172.17.0.1/private buster-staging/main armhf libxkbcommon0 armhf 0.8.2-1 [110 kB]
Get:245 http://172.17.0.1/private buster-staging/main armhf libgtk-3-common all 3.24.4-1 [3683 kB]
Get:246 http://172.17.0.1/private buster-staging/main armhf libgtk-3-0 armhf 3.24.4-1 [2144 kB]
Get:247 http://172.17.0.1/private buster-staging/main armhf libimagequant0 armhf 2.12.2-1 [27.1 kB]
Get:248 http://172.17.0.1/private buster-staging/main armhf libjs-jquery all 3.3.1~dfsg-1 [332 kB]
Get:249 http://172.17.0.1/private buster-staging/main armhf libjs-underscore all 1.8.3~dfsg-2 [91.4 kB]
Get:250 http://172.17.0.1/private buster-staging/main armhf libjs-sphinxdoc all 1.7.9-1 [92.3 kB]
Get:251 http://172.17.0.1/private buster-staging/main armhf liblapack3 armhf 3.8.0-2 [1493 kB]
Get:252 http://172.17.0.1/private buster-staging/main armhf liblua5.1-0 armhf 5.1.5-8.1 [83.3 kB]
Get:253 http://172.17.0.1/private buster-staging/main armhf libncurses-dev armhf 6.1+20181013-1 [278 kB]
Get:254 http://172.17.0.1/private buster-staging/main armhf libpq5 armhf 11.1-2 [147 kB]
Get:255 http://172.17.0.1/private buster-staging/main armhf libpq-dev armhf 11.1-2 [146 kB]
Get:256 http://172.17.0.1/private buster-staging/main armhf librsvg2-bin armhf 2.44.10-1+rpi1 [33.8 kB]
Get:257 http://172.17.0.1/private buster-staging/main armhf libschroedinger-maeparser1 armhf 1.0.1-4 [37.6 kB]
Get:258 http://172.17.0.1/private buster-staging/main armhf libschroedinger-coordgenlibs1 armhf 1.1-2 [137 kB]
Get:259 http://172.17.0.1/private buster-staging/main armhf libschroedinger-coordgenlibs-dev armhf 1.1-2 [27.7 kB]
Get:260 http://172.17.0.1/private buster-staging/main armhf libschroedinger-maeparser-dev armhf 1.0.1-4 [10.6 kB]
Get:261 http://172.17.0.1/private buster-staging/main armhf libsqlite3-dev armhf 3.26.0+fossilbc891ac6b-2 [680 kB]
Get:262 http://172.17.0.1/private buster-staging/main armhf libtinfo-dev armhf 6.1+20181013-1 [932 B]
Get:263 http://172.17.0.1/private buster-staging/main armhf libwebpdemux2 armhf 0.6.1-2 [86.7 kB]
Get:264 http://172.17.0.1/private buster-staging/main armhf libyaml-0-2 armhf 0.2.1-1 [38.8 kB]
Get:265 http://172.17.0.1/private buster-staging/main armhf llvm-7-runtime armhf 1:7.0.1-4+rpi1 [159 kB]
Get:266 http://172.17.0.1/private buster-staging/main armhf llvm-7 armhf 1:7.0.1-4+rpi1 [3770 kB]
Get:267 http://172.17.0.1/private buster-staging/main armhf llvm-7-dev armhf 1:7.0.1-4+rpi1 [20.6 MB]
Get:268 http://172.17.0.1/private buster-staging/main armhf lsb-release all 10.2018112800+rpi1 [27.7 kB]
Get:269 http://172.17.0.1/private buster-staging/main armhf pandoc-data all 2.2.1-3 [329 kB]
Get:270 http://172.17.0.1/private buster-staging/main armhf pandoc armhf 2.2.1-3+b2 [17.5 MB]
Get:271 http://172.17.0.1/private buster-staging/main armhf postgresql-client-common all 199 [83.7 kB]
Get:272 http://172.17.0.1/private buster-staging/main armhf ssl-cert all 1.0.39 [20.8 kB]
Get:273 http://172.17.0.1/private buster-staging/main armhf postgresql-common all 199 [221 kB]
Get:274 http://172.17.0.1/private buster-staging/main armhf postgresql-server-dev-11 armhf 11.1-2 [909 kB]
Get:275 http://172.17.0.1/private buster-staging/main armhf postgresql-server-dev-all all 199 [73.1 kB]
Get:276 http://172.17.0.1/private buster-staging/main armhf preview-latex-style all 11.91-2 [201 kB]
Get:277 http://172.17.0.1/private buster-staging/main armhf python-babel-localedata all 2.6.0+dfsg.1-1 [4083 kB]
Get:278 http://172.17.0.1/private buster-staging/main armhf python-six all 1.12.0-1 [15.7 kB]
Get:279 http://172.17.0.1/private buster-staging/main armhf python-dateutil all 2.6.1-1 [61.1 kB]
Get:280 http://172.17.0.1/private buster-staging/main armhf python-pkg-resources all 40.6.3-1 [181 kB]
Get:281 http://172.17.0.1/private buster-staging/main armhf python-numpy armhf 1:1.16.1-1 [1855 kB]
Get:282 http://172.17.0.1/private buster-staging/main armhf python-tz all 2018.9-1 [33.5 kB]
Get:283 http://172.17.0.1/private buster-staging/main armhf python-pandas-lib armhf 0.23.3-1+b1 [2931 kB]
Get:284 http://172.17.0.1/private buster-staging/main armhf python-pandas all 0.23.3-1 [1743 kB]
Get:285 http://172.17.0.1/private buster-staging/main armhf python-pil armhf 5.4.1-1 [364 kB]
Get:286 http://172.17.0.1/private buster-staging/main armhf python3-pkg-resources all 40.6.3-1 [152 kB]
Get:287 http://172.17.0.1/private buster-staging/main armhf python3-tz all 2018.9-1 [27.0 kB]
Get:288 http://172.17.0.1/private buster-staging/main armhf python3-babel all 2.6.0+dfsg.1-1 [96.7 kB]
Get:289 http://172.17.0.1/private buster-staging/main armhf python3-certifi all 2018.8.24-1 [140 kB]
Get:290 http://172.17.0.1/private buster-staging/main armhf python3-chardet all 3.0.4-3 [80.5 kB]
Get:291 http://172.17.0.1/private buster-staging/main armhf python3-commonmark-bkrs all 0.5.4+ds-2 [28.2 kB]
Get:292 http://172.17.0.1/private buster-staging/main armhf python3-roman all 2.0.0-3 [8768 B]
Get:293 http://172.17.0.1/private buster-staging/main armhf python3-docutils all 0.14+dfsg-3 [377 kB]
Get:294 http://172.17.0.1/private buster-staging/main armhf python3-idna all 2.6-1 [34.3 kB]
Get:295 http://172.17.0.1/private buster-staging/main armhf python3-imagesize all 1.0.0-1 [4960 B]
Get:296 http://172.17.0.1/private buster-staging/main armhf python3-markupsafe armhf 1.1.0-1 [14.4 kB]
Get:297 http://172.17.0.1/private buster-staging/main armhf python3-jinja2 all 2.10-1 [106 kB]
Get:298 http://172.17.0.1/private buster-staging/main armhf python3-pyparsing all 2.2.0+dfsg1-2 [89.6 kB]
Get:299 http://172.17.0.1/private buster-staging/main armhf python3-six all 1.12.0-1 [15.7 kB]
Get:300 http://172.17.0.1/private buster-staging/main armhf python3-packaging all 19.0-1 [20.5 kB]
Get:301 http://172.17.0.1/private buster-staging/main armhf python3-pygments all 2.3.1+dfsg-1 [594 kB]
Get:302 http://172.17.0.1/private buster-staging/main armhf python3-recommonmark all 0.4.0+ds-5 [14.9 kB]
Get:303 http://172.17.0.1/private buster-staging/main armhf python3-urllib3 all 1.24-1 [96.8 kB]
Get:304 http://172.17.0.1/private buster-staging/main armhf python3-requests all 2.20.0-2 [66.7 kB]
Get:305 http://172.17.0.1/private buster-staging/main armhf sphinx-common all 1.7.9-1 [437 kB]
Get:306 http://172.17.0.1/private buster-staging/main armhf python3-alabaster all 0.7.8-1 [18.4 kB]
Get:307 http://172.17.0.1/private buster-staging/main armhf python3-sphinx all 1.7.9-1 [449 kB]
Get:308 http://172.17.0.1/private buster-staging/main armhf rapidjson-dev all 1.1.0+dfsg2-4 [98.6 kB]
Get:309 http://172.17.0.1/private buster-staging/main armhf texlive-fonts-recommended all 2018.20190126-1 [5228 kB]
Get:310 http://172.17.0.1/private buster-staging/main armhf texlive-plain-generic all 2018.20190126-1 [24.3 MB]
Get:311 http://172.17.0.1/private buster-staging/main armhf texlive-generic-extra all 2018.20190126-1 [31.8 kB]
Get:312 http://172.17.0.1/private buster-staging/main armhf texlive-latex-recommended all 2018.20190126-1 [15.2 MB]
Get:313 http://172.17.0.1/private buster-staging/main armhf texlive-pictures all 2018.20190126-1 [4230 kB]
Get:314 http://172.17.0.1/private buster-staging/main armhf texlive-latex-extra all 2018.20190126-1 [12.3 MB]
debconf: delaying package configuration, since apt-utils is not installed
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Selecting previously unselected package libbsd0:armhf.
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Unpacking libbsd0:armhf (0.9.1-1) ...
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Unpacking bsdmainutils (11.1.2) ...
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Unpacking libcc1-0:armhf (8.2.0-15+rpi1) over (8.2.0-14+rpi1) ...
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Unpacking gcc-8-base:armhf (8.2.0-15+rpi1) over (8.2.0-14+rpi1) ...
Setting up gcc-8-base:armhf (8.2.0-15+rpi1) ...
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Unpacking libgcc1:armhf (1:8.2.0-15+rpi1) over (1:8.2.0-14+rpi1) ...
Setting up libgcc1:armhf (1:8.2.0-15+rpi1) ...
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Preparing to unpack .../0-libgomp1_8.2.0-15+rpi1_armhf.deb ...
Unpacking libgomp1:armhf (8.2.0-15+rpi1) over (8.2.0-14+rpi1) ...
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Unpacking libatomic1:armhf (8.2.0-15+rpi1) over (8.2.0-14+rpi1) ...
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Unpacking libasan5:armhf (8.2.0-15+rpi1) over (8.2.0-14+rpi1) ...
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Unpacking libubsan1:armhf (8.2.0-15+rpi1) over (8.2.0-14+rpi1) ...
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Unpacking g++-8 (8.2.0-15+rpi1) over (8.2.0-14+rpi1) ...
Preparing to unpack .../5-libstdc++-8-dev_8.2.0-15+rpi1_armhf.deb ...
Unpacking libstdc++-8-dev:armhf (8.2.0-15+rpi1) over (8.2.0-14+rpi1) ...
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Unpacking libgcc-8-dev:armhf (8.2.0-15+rpi1) over (8.2.0-14+rpi1) ...
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Unpacking gcc-8 (8.2.0-15+rpi1) over (8.2.0-14+rpi1) ...
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Unpacking cpp-8 (8.2.0-15+rpi1) over (8.2.0-14+rpi1) ...
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Unpacking libstdc++6:armhf (8.2.0-15+rpi1) over (8.2.0-14+rpi1) ...
Setting up libstdc++6:armhf (8.2.0-15+rpi1) ...
Selecting previously unselected package libuchardet0:armhf.
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Unpacking libuchardet0:armhf (0.0.6-3) ...
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Unpacking groff-base (1.22.4-2) ...
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Unpacking libpipeline1:armhf (1.5.1-1) ...
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Unpacking man-db (2.8.5-1) ...
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Unpacking libsigsegv2:armhf (2.12-2) ...
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Setting up shared-mime-info (1.10-1) ...
Setting up libxkbcommon0:armhf (0.8.2-1) ...
Setting up libboost-serialization1.67.0:armhf (1.67.0-12) ...
Setting up rapidjson-dev (1.1.0+dfsg2-4) ...
Setting up libteckit0:armhf (2.5.8+ds2-5) ...
Setting up icu-devtools (63.1-6) ...
Setting up liblua5.1-0:armhf (5.1.5-8.1) ...
Setting up libcolord2:armhf (1.4.3-4) ...
Setting up libthai-data (0.1.28-1) ...
Setting up bison (2:3.2.4.dfsg-1) ...
update-alternatives: using /usr/bin/bison.yacc to provide /usr/bin/yacc (yacc) in auto mode
Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up xml-core (0.18) ...
Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up x11-common (1:7.7+19) ...
update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults
Running in chroot, ignoring request.
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of restart.
Setting up libzzip-0-13:armhf (0.13.62-3.1) ...
Setting up xdg-utils (1.1.3-1) ...
Setting up libschroedinger-maeparser-dev:armhf (1.0.1-4) ...
Setting up libboost-system1.67.0:armhf (1.67.0-12) ...
Setting up hicolor-icon-theme (0.17-2) ...
Setting up libncurses-dev:armhf (6.1+20181013-1) ...
Setting up libasan5:armhf (8.2.0-15+rpi1) ...
Setting up libgfortran5:armhf (8.2.0-15+rpi1) ...
Setting up libwayland-cursor0:armhf (1.16.0-1) ...
Setting up libtexluajit2:armhf (2018.20181218.49446-1) ...
Setting up libboost-regex1.67.0:armhf (1.67.0-12) ...
Setting up libwayland-egl1:armhf (1.16.0-1) ...
Setting up libheif1:armhf (1.3.2-1+b1) ...
Setting up libx11-data (2:1.6.7-1) ...
Setting up libpython2.7-stdlib:armhf (2.7.15-5) ...
Setting up libxau6:armhf (1:1.0.8-1+b2) ...
Setting up autopoint (0.19.8.1-9) ...
Setting up libmpdec2:armhf (2.4.2-2) ...
Setting up fonts-lmodern (2.004.5-5) ...
Setting up libavahi-common-data:armhf (0.7-4+b1) ...
Setting up libwebp6:armhf (0.6.1-2) ...
Setting up libfile-stripnondeterminism-perl (1.1.0-1) ...
Setting up libubsan1:armhf (8.2.0-15+rpi1) ...
Setting up libjsoncpp1:armhf (1.7.4-3) ...
Setting up libedit2:armhf (3.1-20181209-1) ...
Setting up libpaper1:armhf (1.1.26) ...

Creating config file /etc/papersize with new version
Setting up binfmt-support (2.2.0-1) ...
Created symlink /etc/systemd/system/multi-user.target.wants/binfmt-support.service -> /lib/systemd/system/binfmt-support.service.
Running in chroot, ignoring request.
All runlevel operations denied by policy
invoke-rc.d: policy-rc.d denied execution of start.
Setting up libpaper-utils (1.1.26) ...
Setting up libobjc4:armhf (8.2.0-15+rpi1) ...
Setting up libpython3.7-stdlib:armhf (3.7.2-1) ...
Setting up fontconfig-config (2.13.1-2) ...
Installing new version of config file /etc/fonts/fonts.conf ...
Setting up libpq-dev (11.1-2) ...
Setting up tex-common (6.10) ...
update-language: texlive-base not installed and configured, doing nothing!
Setting up pandoc (2.2.1-3+b2) ...
Setting up libllvm6.0:armhf (1:6.0.1-10+rpi1) ...
Setting up dconf-service (0.30.1-2) ...
Setting up gettext (0.19.8.1-9) ...
Setting up flex (2.6.4-6.2) ...
Setting up libarchive13:armhf (3.3.3-3) ...
Setting up libllvm7:armhf (1:7.0.1-4+rpi1) ...
Setting up libclang1-7:armhf (1:7.0.1-4+rpi1) ...
Setting up groff-base (1.22.4-2) ...
Setting up libboost-thread1.67.0:armhf (1.67.0-12) ...
Setting up libcurl4:armhf (7.63.0-1) ...
Setting up libtinfo-dev:armhf (6.1+20181013-1) ...
Setting up python2.7 (2.7.15-5) ...
Setting up libclang1-6.0:armhf (1:6.0.1-10+rpi1) ...
Setting up libharfbuzz0b:armhf (2.3.0-1) ...
Setting up libtiff5:armhf (4.0.10-3) ...
Setting up preview-latex-style (11.91-2) ...
Setting up python3.7 (3.7.2-1) ...
Setting up autoconf (2.69-11) ...
Setting up libthai0:armhf (0.1.28-1) ...
Setting up libicu-dev:armhf (63.1-6) ...
Setting up file (1:5.35-2) ...
Setting up libschroedinger-coordgenlibs1:armhf (1.1-2) ...
Setting up libclang-common-7-dev (1:7.0.1-4+rpi1) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up libblas3:armhf (3.8.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
Setting up llvm-7-runtime (1:7.0.1-4+rpi1) ...
Setting up libpython3.7:armhf (3.7.2-1) ...
Setting up libwebpmux3:armhf (0.6.1-2) ...
Setting up libboost-chrono1.67.0:armhf (1.67.0-12) ...
Setting up libpython2.7:armhf (2.7.15-5) ...
Setting up automake (1:1.16.1-4) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libpython3.7-dev:armhf (3.7.2-1) ...
Setting up libice6:armhf (2:1.0.9-2) ...
Setting up libwebpdemux2:armhf (0.6.1-2) ...
Setting up man-db (2.8.5-1) ...
Not building database; man-db/auto-update is not 'true'.
Created symlink /etc/systemd/system/timers.target.wants/man-db.timer -> /lib/systemd/system/man-db.timer.
Setting up libpython2-stdlib:armhf (2.7.15-4) ...
Setting up libgcc-8-dev:armhf (8.2.0-15+rpi1) ...
Setting up libpython2.7-dev:armhf (2.7.15-5) ...
Setting up libavahi-common3:armhf (0.7-4+b1) ...
Setting up cmake (3.13.2-1) ...
Setting up dconf-gsettings-backend:armhf (0.30.1-2) ...
Setting up python2.7-dev (2.7.15-5) ...
Setting up libxcb1:armhf (1.13.1-2) ...
Setting up libpython3-dev:armhf (3.7.2-1) ...
Setting up libtool (2.4.6-9) ...
Setting up libpython3-stdlib:armhf (3.7.2-1) ...
Setting up libfontconfig1:armhf (2.13.1-2) ...
Setting up libstdc++-8-dev:armhf (8.2.0-15+rpi1) ...
Setting up libsm6:armhf (2:1.2.2-1+b3) ...
Setting up libxcb-render0:armhf (1.13.1-2) ...
Setting up libobjc-8-dev:armhf (8.2.0-15+rpi1) ...
Setting up libharfbuzz-icu0:armhf (2.3.0-1) ...
Setting up po-debconf (1.0.21) ...
Setting up gsettings-desktop-schemas (3.28.1-1) ...
Setting up python3 (3.7.2-1) ...
Setting up libgtk-3-common (3.24.4-1) ...
Setting up clang-7 (1:7.0.1-4+rpi1) ...
Setting up python3-alabaster (0.7.8-1) ...
Setting up liblapack3:armhf (3.8.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up python3-idna (2.6-1) ...
Setting up python3-six (1.12.0-1) ...
Setting up libx11-6:armhf (2:1.6.7-1) ...
Setting up doxygen (1.8.13-10) ...
Setting up python3-pyparsing (2.2.0+dfsg1-2) ...
Setting up python3-certifi (2018.8.24-1) ...
Setting up python3-commonmark-bkrs (0.5.4+ds-2) ...
Setting up python3-pkg-resources (40.6.3-1) ...
Setting up llvm-7 (1:7.0.1-4+rpi1) ...
Setting up python3.7-dev (3.7.2-1) ...
Setting up lsb-release (10.2018112800+rpi1) ...
Setting up libschroedinger-coordgenlibs-dev:armhf (1.1-2) ...
Setting up python2 (2.7.15-4) ...
Setting up python3-markupsafe (1.1.0-1) ...
Setting up llvm-7-dev (1:7.0.1-4+rpi1) ...
Setting up gcc-8 (8.2.0-15+rpi1) ...
Setting up libpython2-dev:armhf (2.7.15-4) ...
Setting up g++-8 (8.2.0-15+rpi1) ...
Setting up libpython-stdlib:armhf (2.7.15-4) ...
Setting up python3-chardet (3.0.4-3) ...
Setting up libboost1.67-dev:armhf (1.67.0-12) ...
Setting up python3-jinja2 (2.10-1) ...
Setting up glib-networking:armhf (2.58.0-2) ...
Setting up python2-dev (2.7.15-4) ...
Setting up libboost-system1.67-dev:armhf (1.67.0-12) ...
Setting up libxcomposite1:armhf (1:0.4.4-2) ...
Setting up libxcb-shm0:armhf (1.13.1-2) ...
Setting up libxpm4:armhf (1:3.5.12-1) ...
Setting up libxt6:armhf (1:1.1.5-1) ...
Setting up libxrender1:armhf (1:0.9.10-1) ...
Setting up libavahi-client3:armhf (0.7-4+b1) ...
Setting up python3-urllib3 (1.24-1) ...
Setting up libboost-chrono1.67-dev:armhf (1.67.0-12) ...
Setting up libboost-dev:armhf (1.67.0.1+b1) ...
Setting up python3-packaging (19.0-1) ...
Setting up python3-lib2to3 (3.7.2-3) ...
Setting up python3-tz (2018.9-1) ...
Setting up python3-distutils (3.7.2-3) ...
Setting up python (2.7.15-4) ...
Setting up fontconfig (2.13.1-2) ...
Regenerating fonts cache... done.
Setting up libcups2:armhf (2.2.10-3+b2) ...
Setting up python3-pygments (2.3.1+dfsg-1) ...
Setting up libpython-dev:armhf (2.7.15-4) ...
Setting up python3-roman (2.0.0-3) ...
Setting up postgresql-server-dev-11 (11.1-2) ...
Setting up python3-imagesize (1.0.0-1) ...
Setting up libxext6:armhf (2:1.3.3-1+b2) ...
Setting up libxfixes3:armhf (1:5.0.3-1) ...
Setting up libboost-serialization1.67-dev:armhf (1.67.0-12) ...
Setting up python-dev (2.7.15-4) ...
Setting up libboost-system-dev:armhf (1.67.0.1+b1) ...
Setting up libatspi2.0-0:armhf (2.30.0-5) ...
Setting up libgdk-pixbuf2.0-0:armhf (2.38.0+dfsg-7) ...
Setting up python-tz (2018.9-1) ...
Setting up libsoup2.4-1:armhf (2.64.2-2) ...
Setting up libboost-regex1.67-dev:armhf (1.67.0-12) ...
Setting up libsoup-gnome2.4-1:armhf (2.64.2-2) ...
Setting up python-pkg-resources (40.6.3-1) ...
Setting up python-numpy (1:1.16.1-1) ...
Setting up libxmu6:armhf (2:1.1.2-2) ...
Setting up python3-babel (2.6.0+dfsg.1-1) ...
update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode
Setting up libcupsimage2:armhf (2.2.10-3+b2) ...
Setting up postgresql-server-dev-all (199) ...
Setting up libboost-atomic1.67-dev:armhf (1.67.0-12) ...
Setting up gtk-update-icon-cache (3.24.4-1) ...
Setting up python-six (1.12.0-1) ...
Setting up libxcursor1:armhf (1:1.1.15-2) ...
Setting up libmagickcore-6.q16-6:armhf (8:6.9.10.23+dfsg-2) ...
Setting up python-pandas-lib (0.23.3-1+b1) ...
Setting up libpango-1.0-0:armhf (1.42.4-6) ...
Setting up libatk-bridge2.0-0:armhf (2.30.0-2) ...
Setting up python3-requests (2.20.0-2) ...
Setting up librest-0.7-0:armhf (0.8.1-1) ...
Setting up libboost-regex-dev:armhf (1.67.0.1+b1) ...
Setting up libboost-date-time1.67-dev:armhf (1.67.0-12) ...
Setting up libgs9:armhf (9.26a~dfsg-2) ...
Setting up dh-python (3.20180927) ...
Setting up python-pil:armhf (5.4.1-1) ...
Setting up libxrandr2:armhf (2:1.5.1-1) ...
Setting up libxi6:armhf (2:1.7.9-1) ...
Setting up libxaw7:armhf (2:1.0.13-1) ...
Setting up libcairo2:armhf (1.16.0-2) ...
Setting up libxinerama1:armhf (2:1.1.4-1) ...
Setting up libxdamage1:armhf (1:1.1.4-3) ...
Setting up libboost-thread1.67-dev:armhf (1.67.0-12) ...
Setting up libcairo-gobject2:armhf (1.16.0-2) ...
Setting up python3-dev (3.7.2-1) ...
Setting up texlive-binaries (2018.20181218.49446-1) ...
update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode
update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode
Setting up libpangoft2-1.0-0:armhf (1.42.4-6) ...
Setting up python-dateutil (2.6.1-1) ...
Setting up libmagickwand-6.q16-6:armhf (8:6.9.10.23+dfsg-2) ...
Setting up texlive-base (2018.20190126-1) ...
tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps
tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg
tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper
tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/config/pdftexconfig.tex
tl-paper: setting paper size for dvipdfmx to letter: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg
tl-paper: setting paper size for dvips to letter: /var/lib/texmf/dvips/config/config-paper.ps
tl-paper: setting paper size for pdftex to letter: /var/lib/texmf/tex/generic/config/pdftexconfig.tex
tl-paper: setting paper size for xdvi to letter: /var/lib/texmf/xdvi/XDvi-paper
Setting up texlive-fonts-recommended (2018.20190126-1) ...
Setting up texlive-plain-generic (2018.20190126-1) ...
Setting up texlive-latex-base (2018.20190126-1) ...
Setting up texlive-latex-recommended (2018.20190126-1) ...
Setting up libboost-python1.67-dev (1.67.0-12) ...
Setting up libboost-thread-dev:armhf (1.67.0.1+b1) ...
Setting up texlive-pictures (2018.20190126-1) ...
Setting up python-pandas (0.23.3-1) ...
Setting up imagemagick-6.q16 (8:6.9.10.23+dfsg-2) ...
update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare (compare) in auto mode
update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare-im6 (compare-im6) in auto mode
update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate (animate) in auto mode
update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate-im6 (animate-im6) in auto mode
update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert (convert) in auto mode
update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert-im6 (convert-im6) in auto mode
update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite (composite) in auto mode
update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite-im6 (composite-im6) in auto mode
update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure (conjure) in auto mode
update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure-im6 (conjure-im6) in auto mode
update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import (import) in auto mode
update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import-im6 (import-im6) in auto mode
update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify (identify) in auto mode
update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify-im6 (identify-im6) in auto mode
update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream (stream) in auto mode
update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream-im6 (stream-im6) in auto mode
update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display (display) in auto mode
update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display-im6 (display-im6) in auto mode
update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage (montage) in auto mode
update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage-im6 (montage-im6) in auto mode
update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify (mogrify) in auto mode
update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify-im6 (mogrify-im6) in auto mode
Setting up libpangocairo-1.0-0:armhf (1.42.4-6) ...
Setting up imagemagick (8:6.9.10.23+dfsg-2) ...
Setting up texlive-generic-extra (2018.20190126-1) ...
Setting up latexmk (1:4.61-0.1) ...
Setting up libboost-python-dev (1.67.0.1+b1) ...
Setting up librsvg2-2:armhf (2.44.10-1+rpi1) ...
Setting up texlive-latex-extra (2018.20190126-1) ...
Setting up librsvg2-common:armhf (2.44.10-1+rpi1) ...
Setting up adwaita-icon-theme (3.30.1-1) ...
update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode
Setting up libgtk-3-0:armhf (3.24.4-1) ...
Setting up librsvg2-bin (2.44.10-1+rpi1) ...
Processing triggers for sgml-base (1.29) ...
Setting up docutils-common (0.14+dfsg-3) ...
Processing triggers for sgml-base (1.29) ...
Setting up python3-docutils (0.14+dfsg-3) ...
update-alternatives: using /usr/share/docutils/scripts/python3/rst-buildhtml to provide /usr/bin/rst-buildhtml (rst-buildhtml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2html to provide /usr/bin/rst2html (rst2html) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2html4 to provide /usr/bin/rst2html4 (rst2html4) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2html5 to provide /usr/bin/rst2html5 (rst2html5) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2latex to provide /usr/bin/rst2latex (rst2latex) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2man to provide /usr/bin/rst2man (rst2man) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt to provide /usr/bin/rst2odt (rst2odt) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt_prepstyles to provide /usr/bin/rst2odt_prepstyles (rst2odt_prepstyles) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2pseudoxml to provide /usr/bin/rst2pseudoxml (rst2pseudoxml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2s5 to provide /usr/bin/rst2s5 (rst2s5) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2xetex to provide /usr/bin/rst2xetex (rst2xetex) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2xml to provide /usr/bin/rst2xml (rst2xml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rstpep2html to provide /usr/bin/rstpep2html (rstpep2html) in auto mode
Setting up python3-recommonmark (0.4.0+ds-5) ...
Setting up python3-sphinx (1.7.9-1) ...
update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-apidoc to provide /usr/bin/sphinx-apidoc (sphinx-apidoc) in auto mode
update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-autogen to provide /usr/bin/sphinx-autogen (sphinx-autogen) in auto mode
update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-build to provide /usr/bin/sphinx-build (sphinx-build) in auto mode
update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-quickstart to provide /usr/bin/sphinx-quickstart (sphinx-quickstart) in auto mode
Setting up dh-autoreconf (19) ...
Setting up dh-strip-nondeterminism (1.1.0-1) ...
Setting up debhelper (12) ...
Setting up sbuild-build-depends-rdkit-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.28-5+rpi1) ...
Processing triggers for systemd (240-4+rpi1) ...
Processing triggers for tex-common (6.10) ...
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Building format(s) --all.
	This may take some time... done.
Processing triggers for libgdk-pixbuf2.0-0:armhf (2.38.0+dfsg-7) ...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.8.0-0.bpo.2-armmp armhf (armv7l)
Toolchain package versions: binutils_2.31.1-11+rpi1 dpkg-dev_1.19.2 g++-8_8.2.0-15+rpi1 gcc-8_8.2.0-15+rpi1 libc6-dev_2.28-5+rpi1 libstdc++-8-dev_8.2.0-15+rpi1 libstdc++6_8.2.0-15+rpi1 linux-libc-dev_4.18.20-2+rpi1
Package versions: adduser_3.118 adwaita-icon-theme_3.30.1-1 apt_1.8.0~beta1 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1+rpi1 base-passwd_3.5.45 bash_5.0-2 binfmt-support_2.2.0-1 binutils_2.31.1-11+rpi1 binutils-arm-linux-gnueabihf_2.31.1-11+rpi1 binutils-common_2.31.1-11+rpi1 bison_2:3.2.4.dfsg-1 bsdmainutils_11.1.2 bsdutils_1:2.33.1-0.1 build-essential_12.5 bzip2_1.0.6-9 ca-certificates_20170717 clang-7_1:7.0.1-4+rpi1 cmake_3.13.2-1 cmake-data_3.13.2-1 coreutils_8.30-1 cpio_2.12+dfsg-6 cpp_4:8.2.0-2+rpi1 cpp-8_8.2.0-15+rpi1 dash_0.5.10.2-5 dbus_1.12.12-1 dbus-user-session_1.12.12-1 dconf-gsettings-backend_0.30.1-2 dconf-service_0.30.1-2 dctrl-tools_2.24-3 debconf_1.5.70 debhelper_12 debianutils_4.8.6.1 dh-autoreconf_19 dh-python_3.20180927 dh-strip-nondeterminism_1.1.0-1 diffutils_1:3.6-1 dirmngr_2.2.12-1+rpi1 distro-info-data_0.39 dmsetup_2:1.02.155-1 docutils-common_0.14+dfsg-3 doxygen_1.8.13-10 dpkg_1.19.2 dpkg-dev_1.19.2 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libperl5.24_5.24.1-4 libperl5.28_5.28.1-3 libpipeline1_1.5.1-1 libpixman-1-0_0.36.0-1 libplymouth4_0.9.4-1 libpng16-16_1.6.36-2 libpotrace0_1.15-1 libpq-dev_11.1-2 libpq5_11.1-2 libprocps7_2:3.3.15-2 libproxy1v5_0.4.15-5 libpsl5_0.20.2-2 libptexenc1_2018.20181218.49446-1 libpython-dev_2.7.15-4 libpython-stdlib_2.7.15-4 libpython2-dev_2.7.15-4 libpython2-stdlib_2.7.15-4 libpython2.7_2.7.15-5 libpython2.7-dev_2.7.15-5 libpython2.7-minimal_2.7.15-5 libpython2.7-stdlib_2.7.15-5 libpython3-dev_3.7.2-1 libpython3-stdlib_3.7.2-1 libpython3.7_3.7.2-1 libpython3.7-dev_3.7.2-1 libpython3.7-minimal_3.7.2-1 libpython3.7-stdlib_3.7.2-1 libreadline7_7.0-5 librest-0.7-0_0.8.1-1 librhash0_1.3.7-1 librsvg2-2_2.44.10-1+rpi1 librsvg2-bin_2.44.10-1+rpi1 librsvg2-common_2.44.10-1+rpi1 librtmp1_2.4+20151223.gitfa8646d.1-2 libsasl2-2_2.1.27+dfsg-1 libsasl2-modules-db_2.1.27+dfsg-1 libschroedinger-coordgenlibs-dev_1.1-2 libschroedinger-coordgenlibs1_1.1-2 libschroedinger-maeparser-dev_1.0.1-4 libschroedinger-maeparser1_1.0.1-4 libseccomp2_2.3.3-3+b1 libselinux1_2.8-1+b1 libsemanage-common_2.8-2 libsemanage1_2.8-2 libsepol1_2.8-1 libsigsegv2_2.12-2 libsm6_2:1.2.2-1+b3 libsmartcols1_2.33.1-0.1 libsoup-gnome2.4-1_2.64.2-2 libsoup2.4-1_2.64.2-2 libsqlite3-0_3.26.0+fossilbc891ac6b-2 libsqlite3-dev_3.26.0+fossilbc891ac6b-2 libss2_1.44.5-1 libssh2-1_1.8.0-2 libssl1.1_1.1.1a-1 libstdc++-8-dev_8.2.0-15+rpi1 libstdc++6_8.2.0-15+rpi1 libsynctex2_2018.20181218.49446-1 libsystemd0_240-4+rpi1 libtasn1-6_4.13-3 libteckit0_2.5.8+ds2-5 libtexlua52_2018.20181218.49446-1 libtexlua53_2018.20181218.49446-1 libtexluajit2_2018.20181218.49446-1 libthai-data_0.1.28-1 libthai0_0.1.28-1 libtiff5_4.0.10-3 libtinfo-dev_6.1+20181013-1 libtinfo5_6.1+20181013-1 libtinfo6_6.1+20181013-1 libtool_2.4.6-9 libubsan1_8.2.0-15+rpi1 libuchardet0_0.0.6-3 libudev1_240-4+rpi1 libunistring2_0.9.10-1 libustr-1.0-1_1.0.4-6 libuuid1_2.33.1-0.1 libuv1_1.24.1-1 libwayland-client0_1.16.0-1 libwayland-cursor0_1.16.0-1 libwayland-egl1_1.16.0-1 libwebp6_0.6.1-2 libwebpdemux2_0.6.1-2 libwebpmux3_0.6.1-2 libwoff1_1.0.2-1 libx11-6_2:1.6.7-1 libx11-data_2:1.6.7-1 libx265-165_2.9-4 libxapian30_1.4.9-1 libxau6_1:1.0.8-1+b2 libxaw7_2:1.0.13-1 libxcb-render0_1.13.1-2 libxcb-shm0_1.13.1-2 libxcb1_1.13.1-2 libxcomposite1_1:0.4.4-2 libxcursor1_1:1.1.15-2 libxdamage1_1:1.1.4-3 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1+b2 libxfixes3_1:5.0.3-1 libxi6_2:1.7.9-1 libxinerama1_2:1.1.4-1 libxkbcommon0_0.8.2-1 libxml2_2.9.4+dfsg1-7+b1 libxmu6_2:1.1.2-2 libxpm4_1:3.5.12-1 libxrandr2_2:1.5.1-1 libxrender1_1:0.9.10-1 libxt6_1:1.1.5-1 libxxhash0_0.6.5-2 libyaml-0-2_0.2.1-1 libzstd1_1.3.8+dfsg-3+rpi1 libzzip-0-13_0.13.62-3.1 linux-base_4.5 linux-libc-dev_4.18.20-2+rpi1 llvm-7_1:7.0.1-4+rpi1 llvm-7-dev_1:7.0.1-4+rpi1 llvm-7-runtime_1:7.0.1-4+rpi1 login_1:4.5-1.1 lsb-base_10.2018112800+rpi1 lsb-release_10.2018112800+rpi1 m4_1.4.18-2 make_4.2.1-1.2 makedev_2.3.1-94 man-db_2.8.5-1 mawk_1.3.3-17 mime-support_3.61 mount_2.33.1-0.1 multiarch-support_2.28-5+rpi1 nano_3.2-1 ncurses-base_6.1+20181013-1 ncurses-bin_6.1+20181013-1 netbase_5.5 openssl_1.1.1a-1 pandoc_2.2.1-3+b2 pandoc-data_2.2.1-3 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.28.1-3 perl-base_5.28.1-3 perl-modules-5.24_5.24.1-7 perl-modules-5.28_5.28.1-3 pinentry-curses_1.1.0-1 plymouth_0.9.4-1 po-debconf_1.0.21 poppler-data_0.4.9-2 postgresql-client-common_199 postgresql-common_199 postgresql-server-dev-11_11.1-2 postgresql-server-dev-all_199 preview-latex-style_11.91-2 procps_2:3.3.15-2 python_2.7.15-4 python-babel-localedata_2.6.0+dfsg.1-1 python-dateutil_2.6.1-1 python-dev_2.7.15-4 python-minimal_2.7.15-4 python-numpy_1:1.16.1-1 python-pandas_0.23.3-1 python-pandas-lib_0.23.3-1+b1 python-pil_5.4.1-1 python-pkg-resources_40.6.3-1 python-six_1.12.0-1 python-tz_2018.9-1 python2_2.7.15-4 python2-dev_2.7.15-4 python2-minimal_2.7.15-4 python2.7_2.7.15-5 python2.7-dev_2.7.15-5 python2.7-minimal_2.7.15-5 python3_3.7.2-1 python3-alabaster_0.7.8-1 python3-babel_2.6.0+dfsg.1-1 python3-certifi_2018.8.24-1 python3-chardet_3.0.4-3 python3-commonmark-bkrs_0.5.4+ds-2 python3-dev_3.7.2-1 python3-distutils_3.7.2-3 python3-docutils_0.14+dfsg-3 python3-idna_2.6-1 python3-imagesize_1.0.0-1 python3-jinja2_2.10-1 python3-lib2to3_3.7.2-3 python3-markupsafe_1.1.0-1 python3-minimal_3.7.2-1 python3-packaging_19.0-1 python3-pkg-resources_40.6.3-1 python3-pygments_2.3.1+dfsg-1 python3-pyparsing_2.2.0+dfsg1-2 python3-recommonmark_0.4.0+ds-5 python3-requests_2.20.0-2 python3-roman_2.0.0-3 python3-six_1.12.0-1 python3-sphinx_1.7.9-1 python3-tz_2018.9-1 python3-urllib3_1.24-1 python3.7_3.7.2-1 python3.7-dev_3.7.2-1 python3.7-minimal_3.7.2-1 rapidjson-dev_1.1.0+dfsg2-4 raspbian-archive-keyring_20120528.2 readline-common_7.0-5 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-rdkit-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 sgml-base_1.29 shared-mime-info_1.10-1 sphinx-common_1.7.9-1 ssl-cert_1.0.39 systemd_240-4+rpi1 systemd-sysv_240-4+rpi1 sysvinit-utils_2.93-5 t1utils_1.41-3 tar_1.30+dfsg-4 tex-common_6.10 texlive-base_2018.20190126-1 texlive-binaries_2018.20181218.49446-1 texlive-fonts-recommended_2018.20190126-1 texlive-generic-extra_2018.20190126-1 texlive-latex-base_2018.20190126-1 texlive-latex-extra_2018.20190126-1 texlive-latex-recommended_2018.20190126-1 texlive-pictures_2018.20190126-1 texlive-plain-generic_2018.20190126-1 tzdata_2018i-1 ucf_3.0038+nmu1 udev_240-4+rpi1 util-linux_2.33.1-0.1 x11-common_1:7.7+19 xdg-utils_1.1.3-1 xkb-data_2.23.1-1 xml-core_0.18 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-1

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Thu Jan 31 13:20:34 2019 UTC
gpgv:                using RSA key 9CA877749FAB2E4FA96862ECDC686A27B43481B0
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./rdkit_201809.1+dfsg-6.dsc
dpkg-source: info: extracting rdkit in /<<BUILDDIR>>/rdkit-201809.1+dfsg
dpkg-source: info: unpacking rdkit_201809.1+dfsg.orig.tar.xz
dpkg-source: info: unpacking rdkit_201809.1+dfsg-6.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying NoDownloads.patch
dpkg-source: info: applying postgres_v11_support.patch
dpkg-source: info: applying postgres_Makefile_fixes.patch
dpkg-source: info: applying postgres_disable_failing_tests.patch
dpkg-source: info: applying sphinx_imgconverter.patch
dpkg-source: info: applying catch2_header.patch
dpkg-source: info: applying testcase_32bit_fix.patch
dpkg-source: info: applying fix_coordgen_include_path.patch

Check disc space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=109
SCHROOT_GROUP=buildd
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dpkg-buildpackage: info: source package rdkit
dpkg-buildpackage: info: source version 201809.1+dfsg-6
dpkg-buildpackage: info: source distribution unstable
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dpkg-buildpackage: info: host architecture armhf
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cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/c++  -DRDGeneral_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGENERAL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/RDGeneral.dir/Dict.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.cpp
[  2%] Building CXX object Code/RDGeneral/CMakeFiles/RDGeneral.dir/LocaleSwitcher.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/c++  -DRDGeneral_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGENERAL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/RDGeneral.dir/LocaleSwitcher.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/LocaleSwitcher.cpp
[  3%] Building CXX object Code/RDGeneral/CMakeFiles/RDGeneral.dir/versions.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/c++  -DRDGeneral_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGENERAL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/RDGeneral.dir/versions.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/versions.cpp
[  3%] Linking CXX shared library ../../lib/libRDKitRDGeneral.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/cmake -E cmake_link_script CMakeFiles/RDGeneral.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitRDGeneral.so.1 -o ../../lib/libRDKitRDGeneral.so.1.2018.09.1 CMakeFiles/RDGeneral.dir/Invariant.cpp.o CMakeFiles/RDGeneral.dir/types.cpp.o CMakeFiles/RDGeneral.dir/utils.cpp.o CMakeFiles/RDGeneral.dir/RDLog.cpp.o CMakeFiles/RDGeneral.dir/Dict.cpp.o CMakeFiles/RDGeneral.dir/LocaleSwitcher.cpp.o CMakeFiles/RDGeneral.dir/versions.cpp.o -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitRDGeneral.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1 ../../lib/libRDKitRDGeneral.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  3%] Built target RDGeneral
make -f Code/RDGeneral/CMakeFiles/testDict.dir/build.make Code/RDGeneral/CMakeFiles/testDict.dir/depend
make -f Code/RDGeneral/CMakeFiles/testRDValue.dir/build.make Code/RDGeneral/CMakeFiles/testRDValue.dir/depend
make -f Code/RDBoost/CMakeFiles/RDBoost.dir/build.make Code/RDBoost/CMakeFiles/RDBoost.dir/depend
make -f Code/DataStructs/CMakeFiles/DataStructs.dir/build.make Code/DataStructs/CMakeFiles/DataStructs.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDGeneral /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/testDict.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/DataStructs.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDGeneral /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/testRDValue.dir/DependInfo.cmake --color=
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDBoost /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDBoost/CMakeFiles/RDBoost.dir/DependInfo.cmake --color=
Scanning dependencies of target RDBoost
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/RDBoost/CMakeFiles/RDBoost.dir/build.make Code/RDBoost/CMakeFiles/RDBoost.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
Scanning dependencies of target testRDValue
Scanning dependencies of target testDict
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/RDGeneral/CMakeFiles/testRDValue.dir/build.make Code/RDGeneral/CMakeFiles/testRDValue.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/RDGeneral/CMakeFiles/testDict.dir/build.make Code/RDGeneral/CMakeFiles/testDict.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
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Scanning dependencies of target DataStructs
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/DataStructs/CMakeFiles/DataStructs.dir/build.make Code/DataStructs/CMakeFiles/DataStructs.dir/build
[  3%] Building CXX object Code/RDBoost/CMakeFiles/RDBoost.dir/Wrap.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDBoost && /usr/bin/c++  -DRDBoost_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDBOOST_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/RDBoost.dir/Wrap.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap.cpp
[  3%] Building CXX object Code/RDGeneral/CMakeFiles/testRDValue.dir/testRDValue.cpp.o
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_RDGENERAL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testRDValue.dir/testRDValue.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/testRDValue.cpp
[  4%] Building CXX object Code/RDGeneral/CMakeFiles/testDict.dir/testDict.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_RDGENERAL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testDict.dir/testDict.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/testDict.cpp
[  4%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/BitVect.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/DataStructs.dir/BitVect.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/BitVect.cpp
[  5%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/SparseBitVect.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/DataStructs.dir/SparseBitVect.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/SparseBitVect.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDValue-taggedunion.h:40,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDValue.h:39,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/testRDValue.cpp:2:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long double&}; _Tp = long double; _Alloc = std::allocator<long double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<long double, std::allocator<long double> >::iterator' {aka '__gnu_cxx::__normal_iterator<long double*, std::vector<long double, std::allocator<long double> > >'} changed in GCC 7.1
[  5%] Linking CXX shared library ../../lib/libRDKitRDBoost.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDBoost && /usr/bin/cmake -E cmake_link_script CMakeFiles/RDBoost.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitRDBoost.so.1 -o ../../lib/libRDKitRDBoost.so.1.2018.09.1 CMakeFiles/RDBoost.dir/Wrap.cpp.o ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization -lpthread 
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDValue-taggedunion.h:40,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDValue.h:39,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/testRDValue.cpp:2:
/usr/include/c++/8/bits/stl_vector.h: In function 'void testVector() [with T = double]':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDBoost && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitRDBoost.so.1.2018.09.1 ../../lib/libRDKitRDBoost.so.1 ../../lib/libRDKitRDBoost.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  5%] Built target RDBoost
make -f Code/Numerics/CMakeFiles/testMatrices.dir/build.make Code/Numerics/CMakeFiles/testMatrices.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/CMakeFiles/testMatrices.dir/DependInfo.cmake --color=
Scanning dependencies of target testMatrices
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Numerics/CMakeFiles/testMatrices.dir/build.make Code/Numerics/CMakeFiles/testMatrices.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  5%] Building CXX object Code/Numerics/CMakeFiles/testMatrices.dir/testMatrices.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testMatrices.dir/testMatrices.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/testMatrices.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/testDict.cpp:14:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDValue-taggedunion.h:40,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDValue.h:39,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/testRDValue.cpp:2:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long double}; _Tp = long double; _Alloc = std::allocator<long double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<long double, std::allocator<long double> >::iterator' {aka '__gnu_cxx::__normal_iterator<long double*, std::vector<long double, std::allocator<long double> > >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDValue-taggedunion.h:40,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDValue.h:39,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/testRDValue.cpp:2:
/usr/include/c++/8/bits/stl_vector.h: In function 'void testVector() [with T = long double]':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long double*, std::vector<long double, std::allocator<long double> > >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long double*, std::vector<long double, std::allocator<long double> > >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDValue-taggedunion.h:40,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDValue.h:39,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/testRDValue.cpp:2:
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long double*, std::vector<long double, std::allocator<long double> > >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[  5%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/ExplicitBitVect.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/DataStructs.dir/ExplicitBitVect.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/ExplicitBitVect.cpp
[  5%] Linking CXX executable testRDValue
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/cmake -E cmake_link_script CMakeFiles/testRDValue.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testRDValue.dir/testRDValue.cpp.o  -o testRDValue ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  5%] Built target testRDValue
make -f Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/build.make Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/EigenSolvers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/DependInfo.cmake --color=
Scanning dependencies of target EigenSolvers
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/build.make Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  5%] Building CXX object Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/PowerEigenSolver.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers && /usr/bin/c++  -DEigenSolvers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_EIGENSOLVERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/EigenSolvers.dir/PowerEigenSolver.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/EigenSolvers/PowerEigenSolver.cpp
In file included from /usr/include/c++/8/map:60,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/testDict.cpp:14:
/usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> >'} changed in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:61,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/testDict.cpp:14:
/usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](std::map<_Key, _Tp, _Compare, _Alloc>::key_type&&) [with _Key = std::__cxx11::basic_string<char>; _Tp = RDKit::RDAny; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> >]':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[  5%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/Utils.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/DataStructs.dir/Utils.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/Utils.cpp
[  5%] Linking CXX executable testMatrices
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMatrices.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testMatrices.dir/testMatrices.cpp.o  -o testMatrices ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  5%] Linking CXX executable testDict
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDict.dir/link.txt --verbose=1
[  5%] Built target testMatrices
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testDict.dir/testDict.cpp.o  -o testDict ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
[  5%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/base64.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/DataStructs.dir/base64.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/base64.cpp
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  5%] Built target testDict
make -f Code/Catalogs/CMakeFiles/Catalogs.dir/build.make Code/Catalogs/CMakeFiles/Catalogs.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Catalogs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Catalogs/CMakeFiles/Catalogs.dir/DependInfo.cmake --color=
Scanning dependencies of target Catalogs
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Catalogs/CMakeFiles/Catalogs.dir/build.make Code/Catalogs/CMakeFiles/Catalogs.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  5%] Building CXX object Code/Catalogs/CMakeFiles/Catalogs.dir/Catalog.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Catalogs && /usr/bin/c++  -DCatalogs_EXPORTS -DRDKIT_CATALOGS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Catalogs.dir/Catalog.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs/Catalog.cpp
[  6%] Linking CXX shared library ../../../lib/libRDKitEigenSolvers.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers && /usr/bin/cmake -E cmake_link_script CMakeFiles/EigenSolvers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitEigenSolvers.so.1 -o ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 CMakeFiles/EigenSolvers.dir/PowerEigenSolver.cpp.o ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make -f Code/Query/CMakeFiles/testQuery.dir/build.make Code/Query/CMakeFiles/testQuery.dir/depend
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cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Query /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Query/CMakeFiles/testQuery.dir/DependInfo.cmake --color=
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cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1 ../../../lib/libRDKitEigenSolvers.so
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cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Query && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testQuery.dir/test.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/test.cpp
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[  6%] Building CXX object Code/Catalogs/CMakeFiles/Catalogs.dir/CatalogParams.cpp.o
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make -f Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/build.make Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/depend
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cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testMatCalc.dir/testMatCalc.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataManip/MetricMatrixCalc/testMatCalc.cpp
[  7%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/BitOps.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/DataStructs.dir/BitOps.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/BitOps.cpp
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cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMatCalc.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testMatCalc.dir/testMatCalc.cpp.o  -o testMatCalc ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
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cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SIMDIVPICKERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSimDivPickers_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SimDivPickers.dir/DistPicker.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/DistPicker.cpp
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/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitCatalogs.so.1 -o ../../lib/libRDKitCatalogs.so.1.2018.09.1 CMakeFiles/Catalogs.dir/Catalog.cpp.o CMakeFiles/Catalogs.dir/CatalogParams.cpp.o CMakeFiles/Catalogs.dir/CatalogEntry.cpp.o ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Catalogs && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../lib/libRDKitCatalogs.so.1 ../../lib/libRDKitCatalogs.so
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[  7%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/DiscreteDistMat.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/DataStructs.dir/DiscreteDistMat.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/DiscreteDistMat.cpp
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cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/DataStructs.dir/DiscreteValueVect.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/DiscreteValueVect.cpp
[  8%] Building CXX object Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/MaxMinPicker.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SIMDIVPICKERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSimDivPickers_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SimDivPickers.dir/MaxMinPicker.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/MaxMinPicker.cpp
[  8%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/FPBReader.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/DataStructs.dir/FPBReader.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/FPBReader.cpp
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make -f Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/build.make Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/depend
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cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/Cluster/Murtagh /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/DependInfo.cmake --color=
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cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh && /usr/bin/c++  -DClustering_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_HC_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Clustering.dir/Clustering.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/Cluster/Murtagh/Clustering.cpp
[  9%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/MultiFPBReader.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/DataStructs.dir/MultiFPBReader.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/MultiFPBReader.cpp
[  9%] Building CXX object Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/HierarchicalClusterPicker.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SIMDIVPICKERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSimDivPickers_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SimDivPickers.dir/HierarchicalClusterPicker.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/HierarchicalClusterPicker.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/dynamic_bitset/dynamic_bitset.hpp:24,
                 from /usr/include/boost/dynamic_bitset.hpp:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/ExplicitBitVect.h:16,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/FPBReader.cpp:15:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<double, unsigned int>}; _Tp = std::pair<double, unsigned int>; _Alloc = std::allocator<std::pair<double, unsigned int> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::pair<double, unsigned int> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair<double, unsigned int>}; _Tp = std::pair<double, unsigned int>; _Alloc = std::allocator<std::pair<double, unsigned int> >]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
                 from /usr/include/boost/core/swap.hpp:25,
                 from /usr/include/boost/utility/swap.hpp:15,
                 from /usr/include/boost/tuple/detail/tuple_basic.hpp:40,
                 from /usr/include/boost/tuple/tuple.hpp:28,
                 from /usr/include/boost/tuple/tuple_comparison.hpp:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/MultiFPBReader.cpp:11:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<RDKit::{anonymous}::tplSorter>]':
/usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
     __unguarded_linear_insert(_RandomAccessIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/bits/stl_algo.h:61,
                 from /usr/include/c++/8/algorithm:62,
                 from /usr/include/boost/core/swap.hpp:25,
                 from /usr/include/boost/utility/swap.hpp:15,
                 from /usr/include/boost/tuple/detail/tuple_basic.hpp:40,
                 from /usr/include/boost/tuple/tuple.hpp:28,
                 from /usr/include/boost/tuple/tuple_comparison.hpp:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/MultiFPBReader.cpp:11:
/usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >; _Distance = int; _Tp = boost::tuples::tuple<double, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::{anonymous}::tplSorter>]':
/usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
     ^~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
                 from /usr/include/boost/core/swap.hpp:25,
                 from /usr/include/boost/utility/swap.hpp:15,
                 from /usr/include/boost/tuple/detail/tuple_basic.hpp:40,
                 from /usr/include/boost/tuple/tuple.hpp:28,
                 from /usr/include/boost/tuple/tuple_comparison.hpp:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/MultiFPBReader.cpp:11:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::{anonymous}::tplSorter>]':
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
     __insertion_sort(_RandomAccessIterator __first,
     ^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::{anonymous}::tplSorter>]':
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
     __introsort_loop(_RandomAccessIterator __first,
     ^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[  9%] Linking CXX shared library ../../lib/libRDKitSimDivPickers.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/cmake -E cmake_link_script CMakeFiles/SimDivPickers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitSimDivPickers.so.1 -o ../../lib/libRDKitSimDivPickers.so.1.2018.09.1 CMakeFiles/SimDivPickers.dir/DistPicker.cpp.o CMakeFiles/SimDivPickers.dir/MaxMinPicker.cpp.o CMakeFiles/SimDivPickers.dir/HierarchicalClusterPicker.cpp.o ../../lib/libRDKithc.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitSimDivPickers.so.1.2018.09.1 ../../lib/libRDKitSimDivPickers.so.1 ../../lib/libRDKitSimDivPickers.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  9%] Built target SimDivPickers
make -f Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/build.make Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDBoost/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/DependInfo.cmake --color=
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Ranking.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/MultiFPBReader.cpp:14:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {boost::tuples::tuple<double, unsigned int, unsigned int, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>}; _Tp = boost::tuples::tuple<double, unsigned int, unsigned int>; _Alloc = std::allocator<boost::tuples::tuple<double, unsigned int, unsigned int> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> >::iterator' {aka '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
Scanning dependencies of target rdBase
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {boost::tuples::tuple<double, unsigned int, unsigned int, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>}; _Tp = boost::tuples::tuple<double, unsigned int, unsigned int>; _Alloc = std::allocator<boost::tuples::tuple<double, unsigned int, unsigned int> >]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/build.make Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  9%] Building CXX object Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/RDBase.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDBoost/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdBase_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdBase.dir/RDBase.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap/RDBase.cpp
[  9%] Linking CXX shared module ../../../../rdkit/ML/Cluster/Clustering.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh && /usr/bin/cmake -E cmake_link_script CMakeFiles/Clustering.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/ML/Cluster/Clustering.so CMakeFiles/Clustering.dir/Clustering.cpp.o ../../../../lib/libRDKithc.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >; _Tp = boost::tuples::tuple<double, unsigned int, unsigned int>; _Alloc = std::allocator<boost::tuples::tuple<double, unsigned int, unsigned int> >]':
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type 'std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> >::iterator' {aka '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  9%] Built target Clustering
make -f Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/DependInfo.cmake --color=
Scanning dependencies of target testSimDivPickers
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  9%] Building CXX object Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/testPickers.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SIMDIVPICKERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testSimDivPickers.dir/testPickers.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/testPickers.cpp
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Ranking.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/MultiFPBReader.cpp:14:
/usr/include/c++/8/bits/stl_vector.h: In function 'void RDKit::{anonymous}::generic_nbr_helper(std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> >&, T, const RDKit::{anonymous}::sim_args&, unsigned int) [with T = void (*)(unsigned int, unsigned int, const RDKit::{anonymous}::sim_args*)]':
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type 'std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> >::iterator' {aka '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >'} changed in GCC 7.1
    _M_range_insert(__pos, __first, __last,
    ^~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
In file included from /usr/include/c++/8/algorithm:62,
                 from /usr/include/boost/core/swap.hpp:25,
                 from /usr/include/boost/utility/swap.hpp:15,
                 from /usr/include/boost/tuple/detail/tuple_basic.hpp:40,
                 from /usr/include/boost/tuple/tuple.hpp:28,
                 from /usr/include/boost/tuple/tuple_comparison.hpp:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/MultiFPBReader.cpp:11:
/usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
    std::__introsort_loop(__first, __last,
    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
     std::__lg(__last - __first) * 2,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     __comp);
     ~~~~~~~              
/usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
  std::__insertion_sort(__first, __last, __comp);
  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
                 from /usr/include/boost/dynamic_bitset/dynamic_bitset.hpp:23,
                 from /usr/include/boost/dynamic_bitset.hpp:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/ExplicitBitVect.h:16,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/FPBReader.cpp:15:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairGreater<double, unsigned int> >]':
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
     __insertion_sort(_RandomAccessIterator __first,
     ^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairGreater<double, unsigned int> >]':
/usr/include/c++/8/bits/stl_algo.h:1880:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
     __final_insertion_sort(_RandomAccessIterator __first,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1880:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1880:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
  std::__insertion_sort(__first, __last, __comp);
  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/bits/stl_algo.h:61,
                 from /usr/include/c++/8/algorithm:62,
                 from /usr/include/boost/dynamic_bitset/dynamic_bitset.hpp:23,
                 from /usr/include/boost/dynamic_bitset.hpp:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/ExplicitBitVect.h:16,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/FPBReader.cpp:15:
/usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >; _Distance = int; _Tp = std::pair<double, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairGreater<double, unsigned int> >]':
/usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
     ^~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
                 from /usr/include/boost/dynamic_bitset/dynamic_bitset.hpp:23,
                 from /usr/include/boost/dynamic_bitset.hpp:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/ExplicitBitVect.h:16,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/FPBReader.cpp:15:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairGreater<double, unsigned int> >]':
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
     __introsort_loop(_RandomAccessIterator __first,
     ^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In member function 'std::vector<std::pair<double, unsigned int> > RDKit::FPBReader::getTverskyNeighbors(const uint8_t*, double, double, double, bool) const':
/usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
    std::__introsort_loop(__first, __last,
    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
     std::__lg(__last - __first) * 2,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     __comp);
     ~~~~~~~              
/usr/include/c++/8/bits/stl_algo.h:1971:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
    std::__final_insertion_sort(__first, __last, __comp);
    ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In member function 'std::vector<std::pair<double, unsigned int> > RDKit::FPBReader::getTanimotoNeighbors(const uint8_t*, double, bool) const':
/usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
    std::__introsort_loop(__first, __last,
    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
     std::__lg(__last - __first) * 2,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     __comp);
     ~~~~~~~              
/usr/include/c++/8/bits/stl_algo.h:1971:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
    std::__final_insertion_sort(__first, __last, __comp);
    ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[  9%] Linking CXX shared library ../../lib/libRDKitDataStructs.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/cmake -E cmake_link_script CMakeFiles/DataStructs.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitDataStructs.so.1 -o ../../lib/libRDKitDataStructs.so.1.2018.09.1 CMakeFiles/DataStructs.dir/BitVect.cpp.o CMakeFiles/DataStructs.dir/SparseBitVect.cpp.o CMakeFiles/DataStructs.dir/ExplicitBitVect.cpp.o CMakeFiles/DataStructs.dir/Utils.cpp.o CMakeFiles/DataStructs.dir/base64.cpp.o CMakeFiles/DataStructs.dir/BitOps.cpp.o CMakeFiles/DataStructs.dir/DiscreteDistMat.cpp.o CMakeFiles/DataStructs.dir/DiscreteValueVect.cpp.o CMakeFiles/DataStructs.dir/FPBReader.cpp.o CMakeFiles/DataStructs.dir/MultiFPBReader.cpp.o ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1 ../../lib/libRDKitDataStructs.so
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/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testSimDivPickers.dir/testPickers.cpp.o  -o testSimDivPickers ../../lib/libRDKitSimDivPickers.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread ../../lib/libRDKithc.so.1.2018.09.1 
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/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testFPB.dir/testFPB.cpp.o  -o testFPB ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
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make -f Code/Geometry/CMakeFiles/RDGeometryLib.dir/build.make Code/Geometry/CMakeFiles/RDGeometryLib.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/RDGeometryLib.dir/DependInfo.cmake --color=
Scanning dependencies of target RDGeometryLib
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Geometry/CMakeFiles/RDGeometryLib.dir/build.make Code/Geometry/CMakeFiles/RDGeometryLib.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 14%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/point.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++  -DRDGeometryLib_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/RDGeometryLib.dir/point.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.cpp
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap/RDBase.cpp:15:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:336:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       result = off_type(bp::extract<off_type>(py_tell()));
                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:185:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       off_type py_pos = bp::extract<off_type>(py_tell());
                                                        ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:155:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
         off_type py_pos = bp::extract<off_type>(py_tell());
                                                          ^
[ 14%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/Transform2D.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++  -DRDGeometryLib_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/RDGeometryLib.dir/Transform2D.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Transform2D.cpp
[ 14%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/DiscreteValueVect.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/cDataStructs.dir/DiscreteValueVect.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/Wrap/DiscreteValueVect.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap/RDBase.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap/RDBase.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In static member function 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_append(Container&, boost::python::api::object) [with Container = std::vector<double>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>]':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
[ 14%] Linking CXX executable testDataStructs
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDataStructs.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testDataStructs.dir/testDatastructs.cpp.o  -o testDataStructs ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 14%] Built target testDataStructs
make -f Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/build.make Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/depend
/usr/include/c++/8/bits/stl_vector.h: In function 'void boost::python::container_utils::extend_container(Container&, boost::python::api::object) [with Container = std::vector<double>]':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataManip/MetricMatrixCalc/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/DependInfo.cmake --color=
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap/RDBase.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:172:5: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:172:5: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap/RDBase.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In static member function 'static void boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_delete_item(Container&, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>; bool NoProxy = false; bool NoSlice = false; Data = double; Index = unsigned int; Key = double]':
/usr/include/c++/8/bits/stl_vector.h:1348:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
                                                                       ^
In file included from /usr/include/c++/8/algorithm:62,
                 from /usr/include/boost/function/detail/prologue.hpp:13,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap/RDBase.cpp:11:
/usr/include/c++/8/bits/stl_algo.h: In function '_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const double>]':
/usr/include/c++/8/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
     __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last,
     ^~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h: In static member function 'static bool boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_contains(Container&, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>; bool NoProxy = false; bool NoSlice = false; Data = double; Index = unsigned int; Key = double]':
/usr/include/c++/8/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
       return __find_if(__first, __last, __pred,
              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
          std::__iterator_category(__first));
          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
       return __find_if(__first, __last, __pred,
              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
          std::__iterator_category(__first));
          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Scanning dependencies of target rdMetricMatrixCalc
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/build.make Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 14%] Building CXX object Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/rdMetricMatrixCalc.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMetricMatrixCalc_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMetricMatrixCalc.dir/rdMetricMatrixCalc.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataManip/MetricMatrixCalc/Wrap/rdMetricMatrixCalc.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap/RDBase.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap/RDBase.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(std::vector<_Tp, _Alloc>::const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; <template-parameter-2-2> = void; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/stl_vector.h:1266:2: note: parameter passing for argument of type 'std::vector<double>::const_iterator' {aka '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >'} changed in GCC 7.1
  insert(const_iterator __position, _InputIterator __first,
  ^~~~~~
/usr/include/c++/8/bits/stl_vector.h:1266:2: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_vector.h:1266:2: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
    _M_range_insert(__pos, __first, __last,
    ^~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_vector.h: In static member function 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<double>, boost::python::detail::final_vector_derived_policies<std::vector<double>, false>, boost::python::detail::container_element<std::vector<double>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<double>, false> >, unsigned int>; Data = double; Index = unsigned int]':
/usr/include/c++/8/bits/stl_vector.h:1348:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
                                                                       ^
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap/RDBase.cpp:11:
/usr/include/c++/8/bits/vector.tcc:149:2: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  _M_realloc_insert(begin() + (__position - cbegin()), __x);
  ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap/RDBase.cpp:11:
/usr/include/c++/8/bits/stl_vector.h:1348:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
                                                                       ^
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap/RDBase.cpp:11:
/usr/include/c++/8/bits/vector.tcc:149:2: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  _M_realloc_insert(begin() + (__position - cbegin()), __x);
  ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap/RDBase.cpp:11:
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:5,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap/RDBase.cpp:11:
/usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:113:17: note: parameter passing for argument of type 'std::vector<double>::const_iterator' {aka '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >'} changed in GCC 7.1
                 container.insert(container.begin()+from, first, last);
                 ^~~~~~~~~
/usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:113:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap/RDBase.cpp:11:
/usr/include/c++/8/bits/stl_vector.h:1348:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
                                                                       ^
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:5,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap/RDBase.cpp:11:
/usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:117:17: note: parameter passing for argument of type 'std::vector<double>::const_iterator' {aka '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >'} changed in GCC 7.1
                 container.insert(container.begin()+from, first, last);
                 ^~~~~~~~~
/usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:117:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap/RDBase.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In static member function 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_extend(Container&, boost::python::api::object) [with Container = std::vector<double>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>]':
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
    _M_range_insert(__pos, __first, __last,
    ^~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataManip/MetricMatrixCalc/Wrap/rdMetricMatrixCalc.cpp:15:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h: In function 'double RDDataManip::EuclideanDistanceMetric(const T1&, const T2&, unsigned int) [with T1 = PySequenceHolder<double>; T2 = PySequenceHolder<double>]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       T res = python::extract<T>(d_seq[which]);
         ^~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       T res = python::extract<T>(d_seq[which]);
         ^~~
[ 14%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/Transform3D.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++  -DRDGeometryLib_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/RDGeometryLib.dir/Transform3D.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Transform3D.cpp
[ 14%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/SparseIntVect.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/cDataStructs.dir/SparseIntVect.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/Wrap/SparseIntVect.cpp
[ 14%] Linking CXX shared module ../../../../rdkit/DataManip/Metric/rdMetricMatrixCalc.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMetricMatrixCalc.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/DataManip/Metric/rdMetricMatrixCalc.so CMakeFiles/rdMetricMatrixCalc.dir/rdMetricMatrixCalc.cpp.o ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 14%] Built target rdMetricMatrixCalc
make -f Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build.make Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/DependInfo.cmake --color=
Scanning dependencies of target rdSimDivPickers
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make -f Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build.make Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 14%] Building CXX object Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/MaxMinPicker.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSimDivPickers_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdSimDivPickers.dir/MaxMinPicker.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/Wrap/MaxMinPicker.cpp
[ 14%] Linking CXX shared module ../../../rdkit/rdBase.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDBoost/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdBase.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../rdkit/rdBase.so CMakeFiles/rdBase.dir/RDBase.cpp.o ../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 14%] Built target rdBase
[ 14%] Building CXX object Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/HierarchicalClusterPicker.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSimDivPickers_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdSimDivPickers.dir/HierarchicalClusterPicker.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/Wrap/HierarchicalClusterPicker.cpp
[ 14%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/UniformGrid3D.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++  -DRDGeometryLib_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/RDGeometryLib.dir/UniformGrid3D.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/UniformGrid3D.cpp
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/Wrap/MaxMinPicker.cpp: In member function 'RDKit::INT_VECT RDPickers::MaxMinPicker::lazyPick(T&, unsigned int, unsigned int, const INT_VECT&, int, double&) const [with T = RDPickers::pyobjFunctor]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/Wrap/MaxMinPicker.cpp:63:48: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
     return python::extract<double>(dp_obj(i, j));
                                                ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/Wrap/MaxMinPicker.cpp:63:48: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
     return python::extract<double>(dp_obj(i, j));
                                                ^
[ 14%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/GridUtils.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++  -DRDGeometryLib_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/RDGeometryLib.dir/GridUtils.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/GridUtils.cpp
[ 14%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_SparseBV.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/cDataStructs.dir/wrap_SparseBV.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/Wrap/wrap_SparseBV.cpp
[ 14%] Building CXX object Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/rdSimDivPickers.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSimDivPickers_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdSimDivPickers.dir/rdSimDivPickers.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/Wrap/rdSimDivPickers.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/GridUtils.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/GridUtils.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDGeom::Point3D&}; _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/GridUtils.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/GridUtils.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In function 'std::vector<RDGeom::Point3D> RDGeom::findGridTerminalPoints(const RDGeom::UniformGrid3D&, double, double)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
[ 15%] Linking CXX shared library ../../lib/libRDKitRDGeometryLib.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/cmake -E cmake_link_script CMakeFiles/RDGeometryLib.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitRDGeometryLib.so.1 -o ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 CMakeFiles/RDGeometryLib.dir/point.cpp.o CMakeFiles/RDGeometryLib.dir/Transform2D.cpp.o CMakeFiles/RDGeometryLib.dir/Transform3D.cpp.o CMakeFiles/RDGeometryLib.dir/UniformGrid3D.cpp.o CMakeFiles/RDGeometryLib.dir/GridUtils.cpp.o ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1 ../../lib/libRDKitRDGeometryLib.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 15%] Built target RDGeometryLib
make -f Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build.make Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/InfoTheory /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/InfoTheory /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/DependInfo.cmake --color=
Scanning dependencies of target InfoTheory
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build.make Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 15%] Building CXX object Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/InfoBitRanker.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/InfoTheory && /usr/bin/c++  -DInfoTheory_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_INFOTHEORY_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/InfoTheory.dir/InfoBitRanker.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/InfoTheory/InfoBitRanker.cpp
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/Wrap/SparseIntVect.cpp:18:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h: In function 'void {anonymous}::pyUpdateFromSequence(RDKit::SparseIntVect<IndexType>&, boost::python::api::object&) [with IndexType = long long int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       T res = python::extract<T>(d_seq[which]);
         ^~~
[ 16%] Linking CXX shared module ../../../rdkit/SimDivFilters/rdSimDivPickers.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdSimDivPickers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../rdkit/SimDivFilters/rdSimDivPickers.so CMakeFiles/rdSimDivPickers.dir/MaxMinPicker.cpp.o CMakeFiles/rdSimDivPickers.dir/HierarchicalClusterPicker.cpp.o CMakeFiles/rdSimDivPickers.dir/rdSimDivPickers.cpp.o ../../../lib/libRDKitSimDivPickers.so.1.2018.09.1 ../../../lib/libRDKithc.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 16%] Built target rdSimDivPickers
[ 16%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_ExplicitBV.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/cDataStructs.dir/wrap_ExplicitBV.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/Wrap/wrap_ExplicitBV.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/InfoTheory/InfoBitRanker.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/InfoTheory/InfoBitRanker.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair<double, int>&}; _Tp = std::pair<double, int>; _Alloc = std::allocator<std::pair<double, int> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::pair<double, int> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<double, int>*, std::vector<std::pair<double, int> > >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::pair<double, int> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<double, int>*, std::vector<std::pair<double, int> > >'} changed in GCC 7.1
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h: In function 'void {anonymous}::pyUpdateFromSequence(RDKit::SparseIntVect<IndexType>&, boost::python::api::object&) [with IndexType = long long unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       T res = python::extract<T>(d_seq[which]);
         ^~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/InfoTheory/InfoBitRanker.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/InfoTheory/InfoBitRanker.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In member function 'double* RDInfoTheory::InfoBitRanker::getTopN(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, int>*, std::vector<std::pair<double, int> > >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, int>*, std::vector<std::pair<double, int> > >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
make -f Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ChemicalFeatures /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/DependInfo.cmake --color=
Scanning dependencies of target ChemicalFeatures
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 16%] Building CXX object Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/FreeChemicalFeature.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures && /usr/bin/c++  -DChemicalFeatures_EXPORTS -DRDKIT_CHEMICALFEATURES_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ChemicalFeatures.dir/FreeChemicalFeature.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ChemicalFeatures/FreeChemicalFeature.cpp
[ 17%] Linking CXX shared library ../../../lib/libRDKitInfoTheory.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/InfoTheory && /usr/bin/cmake -E cmake_link_script CMakeFiles/InfoTheory.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitInfoTheory.so.1 -o ../../../lib/libRDKitInfoTheory.so.1.2018.09.1 CMakeFiles/InfoTheory.dir/InfoBitRanker.cpp.o ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/InfoTheory && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitInfoTheory.so.1.2018.09.1 ../../../lib/libRDKitInfoTheory.so.1 ../../../lib/libRDKitInfoTheory.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 17%] Built target InfoTheory
[ 17%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_BitOps.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/cDataStructs.dir/wrap_BitOps.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/Wrap/wrap_BitOps.cpp
[ 17%] Linking CXX shared library ../../lib/libRDKitChemicalFeatures.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures && /usr/bin/cmake -E cmake_link_script CMakeFiles/ChemicalFeatures.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitChemicalFeatures.so.1 -o ../../lib/libRDKitChemicalFeatures.so.1.2018.09.1 CMakeFiles/ChemicalFeatures.dir/FreeChemicalFeature.cpp.o ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitChemicalFeatures.so.1.2018.09.1 ../../lib/libRDKitChemicalFeatures.so.1 ../../lib/libRDKitChemicalFeatures.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 17%] Built target ChemicalFeatures
[ 18%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_FPB.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/cDataStructs.dir/wrap_FPB.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/Wrap/wrap_FPB.cpp
make -f Code/Geometry/CMakeFiles/testTransforms.dir/build.make Code/Geometry/CMakeFiles/testTransforms.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/testTransforms.dir/DependInfo.cmake --color=
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make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 18%] Building CXX object Code/Geometry/CMakeFiles/testTransforms.dir/testTransforms.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testTransforms.dir/testTransforms.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/testTransforms.cpp
[ 18%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_Utils.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/cDataStructs.dir/wrap_Utils.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/Wrap/wrap_Utils.cpp
make -f Code/Geometry/CMakeFiles/testGrid.dir/build.make Code/Geometry/CMakeFiles/testGrid.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/testGrid.dir/DependInfo.cmake --color=
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make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 18%] Building CXX object Code/Geometry/CMakeFiles/testGrid.dir/testGrid.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testGrid.dir/testGrid.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/testGrid.cpp
[ 19%] Linking CXX executable testTransforms
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/cmake -E cmake_link_script CMakeFiles/testTransforms.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testTransforms.dir/testTransforms.cpp.o  -o testTransforms ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
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make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/DependInfo.cmake --color=
Scanning dependencies of target rdGeometry
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build.make Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 19%] Building CXX object Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/Point.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdGeometry_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdGeometry.dir/Point.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Wrap/Point.cpp
[ 19%] Building CXX object Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/UniformGrid3D.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdGeometry_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdGeometry.dir/UniformGrid3D.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Wrap/UniformGrid3D.cpp
[ 19%] Linking CXX shared module ../../../rdkit/DataStructs/cDataStructs.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/cDataStructs.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../rdkit/DataStructs/cDataStructs.so CMakeFiles/cDataStructs.dir/DataStructs.cpp.o CMakeFiles/cDataStructs.dir/DiscreteValueVect.cpp.o CMakeFiles/cDataStructs.dir/SparseIntVect.cpp.o CMakeFiles/cDataStructs.dir/wrap_SparseBV.cpp.o CMakeFiles/cDataStructs.dir/wrap_ExplicitBV.cpp.o CMakeFiles/cDataStructs.dir/wrap_BitOps.cpp.o CMakeFiles/cDataStructs.dir/wrap_FPB.cpp.o CMakeFiles/cDataStructs.dir/wrap_Utils.cpp.o ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 19%] Built target cDataStructs
[ 20%] Building CXX object Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/rdGeometry.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdGeometry_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdGeometry.dir/rdGeometry.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Wrap/rdGeometry.cpp
[ 20%] Linking CXX executable testGrid
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/cmake -E cmake_link_script CMakeFiles/testGrid.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testGrid.dir/testGrid.cpp.o  -o testGrid ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 20%] Built target testGrid
make -f Code/Numerics/Alignment/CMakeFiles/Alignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/Alignment.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Alignment /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/CMakeFiles/Alignment.dir/DependInfo.cmake --color=
Scanning dependencies of target Alignment
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make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 20%] Building CXX object Code/Numerics/Alignment/CMakeFiles/Alignment.dir/AlignPoints.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment && /usr/bin/c++  -DAlignment_EXPORTS -DRDKIT_ALIGNMENT_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Alignment.dir/AlignPoints.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Alignment/AlignPoints.cpp
make -f Code/GraphMol/CMakeFiles/GraphMol.dir/build.make Code/GraphMol/CMakeFiles/GraphMol.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/GraphMol.dir/DependInfo.cmake --color=
Scanning dependencies of target GraphMol
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make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 20%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Atom.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/Atom.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.cpp
[ 20%] Linking CXX shared library ../../../lib/libRDKitAlignment.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment && /usr/bin/cmake -E cmake_link_script CMakeFiles/Alignment.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitAlignment.so.1 -o ../../../lib/libRDKitAlignment.so.1.2018.09.1 CMakeFiles/Alignment.dir/AlignPoints.cpp.o ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitAlignment.so.1.2018.09.1 ../../../lib/libRDKitAlignment.so.1 ../../../lib/libRDKitAlignment.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 20%] Built target Alignment
make -f Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build.make Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/InfoTheory/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/DependInfo.cmake --color=
Scanning dependencies of target rdInfoTheory
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build.make Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 20%] Building CXX object Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/InfoBitRanker.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdInfoTheory_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdInfoTheory.dir/InfoBitRanker.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/InfoTheory/Wrap/InfoBitRanker.cpp
[ 21%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/QueryAtom.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/QueryAtom.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/QueryAtom.cpp
[ 21%] Linking CXX shared module ../../../rdkit/Geometry/rdGeometry.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdGeometry.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../rdkit/Geometry/rdGeometry.so CMakeFiles/rdGeometry.dir/Point.cpp.o CMakeFiles/rdGeometry.dir/UniformGrid3D.cpp.o CMakeFiles/rdGeometry.dir/rdGeometry.cpp.o ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 21%] Built target rdGeometry
[ 21%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/QueryBond.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/QueryBond.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/QueryBond.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.cpp:13:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 21%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Bond.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/Bond.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Bond.cpp
[ 21%] Building CXX object Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/BitCorrMatGenerator.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdInfoTheory_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdInfoTheory.dir/BitCorrMatGenerator.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/InfoTheory/Wrap/BitCorrMatGenerator.cpp
make -f Code/ML/Data/CMakeFiles/cQuantize.dir/build.make Code/ML/Data/CMakeFiles/cQuantize.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/Data /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/Data /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/Data/CMakeFiles/cQuantize.dir/DependInfo.cmake --color=
Scanning dependencies of target cQuantize
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ML/Data/CMakeFiles/cQuantize.dir/build.make Code/ML/Data/CMakeFiles/cQuantize.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 21%] Building CXX object Code/ML/Data/CMakeFiles/cQuantize.dir/cQuantize.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/Data && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DcQuantize_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/cQuantize.dir/cQuantize.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/Data/cQuantize.cpp
[ 21%] Building CXX object Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/rdInfoTheory.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdInfoTheory_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdInfoTheory.dir/rdInfoTheory.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/InfoTheory/Wrap/rdInfoTheory.cpp
[ 21%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/MolOps.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/MolOps.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolOps.cpp
[ 21%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/FindRings.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/FindRings.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FindRings.cpp
[ 21%] Linking CXX shared module ../../../rdkit/ML/Data/cQuantize.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/Data && /usr/bin/cmake -E cmake_link_script CMakeFiles/cQuantize.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../rdkit/ML/Data/cQuantize.so CMakeFiles/cQuantize.dir/cQuantize.cpp.o ../../../lib/libRDKitInfoTheory.so.1.2018.09.1 ../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 21%] Built target cQuantize
make -f Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ChemicalFeatures /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/DependInfo.cmake --color=
Scanning dependencies of target testChemicalFeatures
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 21%] Building CXX object Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/testChemicalFeatures.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures && /usr/bin/c++  -DRDKIT_CHEMICALFEATURES_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testChemicalFeatures.dir/testChemicalFeatures.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ChemicalFeatures/testChemicalFeatures.cpp
[ 21%] Linking CXX shared module ../../../../rdkit/ML/InfoTheory/rdInfoTheory.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdInfoTheory.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/ML/InfoTheory/rdInfoTheory.so CMakeFiles/rdInfoTheory.dir/InfoBitRanker.cpp.o CMakeFiles/rdInfoTheory.dir/BitCorrMatGenerator.cpp.o CMakeFiles/rdInfoTheory.dir/rdInfoTheory.cpp.o ../../../../lib/libRDKitInfoTheory.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 21%] Built target rdInfoTheory
make -f Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Alignment /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/DependInfo.cmake --color=
Scanning dependencies of target testAlignment
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 21%] Building CXX object Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/testAlignment.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment && /usr/bin/c++  -DRDKIT_ALIGNMENT_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testAlignment.dir/testAlignment.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Alignment/testAlignment.cpp
[ 21%] Linking CXX executable testChemicalFeatures
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures && /usr/bin/cmake -E cmake_link_script CMakeFiles/testChemicalFeatures.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testChemicalFeatures.dir/testChemicalFeatures.cpp.o  -o testChemicalFeatures ../../lib/libRDKitChemicalFeatures.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 21%] Built target testChemicalFeatures
make -f Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build.make Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Alignment/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/DependInfo.cmake --color=
Scanning dependencies of target rdAlignment
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build.make Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 21%] Building CXX object Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/rdAlignment.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdAlignment_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdAlignment.dir/rdAlignment.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Alignment/Wrap/rdAlignment.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/GraphMol.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolOps.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/GraphMol.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolOps.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/GraphMol.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolOps.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FindRings.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/GraphMol.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolOps.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In function 'std::map<T, boost::shared_ptr<RDKit::ROMol> > RDKit::MolOps::getMolFragsWithQuery(const RDKit::ROMol&, T (*)(const RDKit::ROMol&, const RDKit::Atom*), bool, const std::vector<T>*, bool) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In function 'std::map<T, boost::shared_ptr<RDKit::ROMol> > RDKit::MolOps::getMolFragsWithQuery(const RDKit::ROMol&, T (*)(const RDKit::ROMol&, const RDKit::Atom*), bool, const std::vector<T>*, bool) [with T = int]':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In function 'std::map<T, boost::shared_ptr<RDKit::ROMol> > RDKit::MolOps::getMolFragsWithQuery(const RDKit::ROMol&, T (*)(const RDKit::ROMol&, const RDKit::Atom*), bool, const std::vector<T>*, bool) [with T = unsigned int]':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/GraphMol.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolOps.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In function 'std::vector<boost::shared_ptr<RDKit::ROMol> > RDKit::MolOps::getMolFrags(const RDKit::ROMol&, bool, RDKit::INT_VECT*, RDKit::VECT_INT_VECT*, bool)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/GraphMol.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolOps.cpp:11:
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 21%] Linking CXX executable testAlignment
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment && /usr/bin/cmake -E cmake_link_script CMakeFiles/testAlignment.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testAlignment.dir/testAlignment.cpp.o  -o testAlignment ../../../lib/libRDKitAlignment.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 21%] Built target testAlignment
[ 21%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/ROMol.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/ROMol.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.cpp
[ 22%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/RWMol.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/RWMol.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RWMol.cpp
[ 22%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/PeriodicTable.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/PeriodicTable.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PeriodicTable.cpp
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Alignment/Wrap/rdAlignment.cpp:16:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h: In function 'void RDNumeric::Alignments::GetPointsFromPythonSequence(boost::python::api::object&, RDGeom::Point3DConstPtrVect&)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       T res = python::extract<T>(d_seq[which]);
         ^~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       T res = python::extract<T>(d_seq[which]);
         ^~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       T res = python::extract<T>(d_seq[which]);
         ^~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h: In function 'PyObject* RDNumeric::Alignments::AlignPointPairs(boost::python::api::object, boost::python::api::object, boost::python::api::object, bool, unsigned int)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       T res = python::extract<T>(d_seq[which]);
         ^~~
[ 22%] Linking CXX shared module ../../../../rdkit/Numerics/rdAlignment.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdAlignment.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Numerics/rdAlignment.so CMakeFiles/rdAlignment.dir/rdAlignment.cpp.o ../../../../lib/libRDKitAlignment.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 22%] Built target rdAlignment
[ 22%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/atomic_data.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/atomic_data.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/atomic_data.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PeriodicTable.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PeriodicTable.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDKit::atomicData&}; _Tp = RDKit::atomicData; _Alloc = std::allocator<RDKit::atomicData>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::atomicData>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::atomicData*, std::vector<RDKit::atomicData> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PeriodicTable.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PeriodicTable.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::PeriodicTable::PeriodicTable()':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::atomicData*, std::vector<RDKit::atomicData> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.cpp:17:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RWMol.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RWMol.cpp:16:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RWMol.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RWMol.cpp:16:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 22%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/QueryOps.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/QueryOps.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/QueryOps.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RWMol.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RWMol.cpp:16:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::vector<std::__cxx11::basic_string<char> >]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.cpp:17:
/usr/include/c++/8/bits/stl_vector.h: In member function 'unsigned int RDKit::ROMol::addAtom(RDKit::Atom*, bool, bool)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RWMol.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RWMol.cpp:16:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void RDKit::RWMol::insertMol(const RDKit::ROMol&)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 22%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/MolPickler.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/MolPickler.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolPickler.cpp
/usr/include/c++/8/bits/stl_vector.h: In member function 'unsigned int RDKit::RWMol::addAtom(bool)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 22%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Canon.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/Canon.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Canon.cpp
[ 23%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/AtomIterators.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/AtomIterators.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/AtomIterators.cpp
[ 23%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/BondIterators.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/BondIterators.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/BondIterators.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Canon.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolPickler.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolPickler.cpp:10:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolPickler.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolPickler.cpp:10:
/usr/include/c++/8/bits/stl_vector.h: In static member function 'static void RDKit::MolPickler::_addAtomFromPickleV1(std::istream&, RDKit::ROMol*)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 23%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Aromaticity.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/Aromaticity.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Aromaticity.cpp
[ 23%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Kekulize.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/Kekulize.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Kekulize.cpp
[ 23%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/MolDiscriminators.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/MolDiscriminators.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDiscriminators.cpp
[ 23%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/ConjugHybrid.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/ConjugHybrid.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ConjugHybrid.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Aromaticity.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolOps.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDiscriminators.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 24%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/AddHs.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/AddHs.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/AddHs.cpp
[ 24%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Matrices.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/Matrices.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Matrices.cpp
[ 24%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Chirality.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/Chirality.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Chirality.cpp
[ 24%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/RingInfo.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/RingInfo.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RingInfo.cpp
[ 24%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Conformer.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/Conformer.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Conformer.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Matrices.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/AddHs.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:159:5: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/AddHs.cpp:10:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/AddHs.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Chirality.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 24%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Renumber.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/Renumber.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Renumber.cpp
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/AddHs.cpp:10:
/usr/include/c++/8/bits/stl_vector.h: In function 'void RDKit::MolOps::removeHs(RDKit::RWMol&, bool, bool, bool)':
/usr/include/c++/8/bits/stl_vector.h:1318:58: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
       { return _M_erase(begin() + (__position - cbegin())); }
                                                          ^
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:16,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Conformer.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Conformer.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDGeom::Point3D&}; _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In function 'void RDKit::MolOps::addHs(RDKit::RWMol&, bool, bool, const UINT_VECT*, bool)':
/usr/include/c++/8/bits/stl_vector.h:1318:58: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
       { return _M_erase(begin() + (__position - cbegin())); }
                                                          ^
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:16,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Conformer.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Conformer.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In copy constructor 'RDKit::Conformer::Conformer(const RDKit::Conformer&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
[ 25%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/AdjustQuery.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/AdjustQuery.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/AdjustQuery.cpp
[ 25%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Resonance.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/Resonance.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Resonance.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/GraphMol.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Renumber.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/GraphMol.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Renumber.cpp:10:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/GraphMol.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Renumber.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/GraphMol.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Renumber.cpp:10:
/usr/include/c++/8/bits/stl_vector.h: In function 'RDKit::ROMol* RDKit::MolOps::renumberAtoms(const RDKit::ROMol&, const std::vector<unsigned int>&)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 25%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/StereoGroup.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/StereoGroup.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StereoGroup.cpp
[ 25%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/new_canon.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/new_canon.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/new_canon.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Resonance.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'void RDKit::ResonanceUtils::fixExplicitImplicitHs(RDKit::ROMol&)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 25%] Linking CXX shared library ../../lib/libRDKitGraphMol.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/GraphMol.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitGraphMol.so.1 -o ../../lib/libRDKitGraphMol.so.1.2018.09.1 CMakeFiles/GraphMol.dir/Atom.cpp.o CMakeFiles/GraphMol.dir/QueryAtom.cpp.o CMakeFiles/GraphMol.dir/QueryBond.cpp.o CMakeFiles/GraphMol.dir/Bond.cpp.o CMakeFiles/GraphMol.dir/MolOps.cpp.o CMakeFiles/GraphMol.dir/FindRings.cpp.o CMakeFiles/GraphMol.dir/ROMol.cpp.o CMakeFiles/GraphMol.dir/RWMol.cpp.o CMakeFiles/GraphMol.dir/PeriodicTable.cpp.o CMakeFiles/GraphMol.dir/atomic_data.cpp.o CMakeFiles/GraphMol.dir/QueryOps.cpp.o CMakeFiles/GraphMol.dir/MolPickler.cpp.o CMakeFiles/GraphMol.dir/Canon.cpp.o CMakeFiles/GraphMol.dir/AtomIterators.cpp.o CMakeFiles/GraphMol.dir/BondIterators.cpp.o CMakeFiles/GraphMol.dir/Aromaticity.cpp.o CMakeFiles/GraphMol.dir/Kekulize.cpp.o CMakeFiles/GraphMol.dir/MolDiscriminators.cpp.o CMakeFiles/GraphMol.dir/ConjugHybrid.cpp.o CMakeFiles/GraphMol.dir/AddHs.cpp.o CMakeFiles/GraphMol.dir/Matrices.cpp.o CMakeFiles/GraphMol.dir/Chirality.cpp.o CMakeFiles/GraphMol.dir/RingInfo.cpp.o CMakeFiles/GraphMol.dir/Conformer.cpp.o CMakeFiles/GraphMol.dir/Renumber.cpp.o CMakeFiles/GraphMol.dir/AdjustQuery.cpp.o CMakeFiles/GraphMol.dir/Resonance.cpp.o CMakeFiles/GraphMol.dir/StereoGroup.cpp.o CMakeFiles/GraphMol.dir/new_canon.cpp.o ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1 ../../lib/libRDKitGraphMol.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 25%] Built target GraphMol
make -f Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/depend
make -f Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/depend
make -f Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/depend
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make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/DependInfo.cmake --color=
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cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Substruct /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/DependInfo.cmake --color=
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cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolTransforms /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/DependInfo.cmake --color=
Scanning dependencies of target Trajectory
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
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Scanning dependencies of target SubstructMatch
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build
[ 25%] Building CXX object Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/Trajectory.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_TRAJECTORY_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DTrajectory_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Trajectory.dir/Trajectory.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory/Trajectory.cpp
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
Scanning dependencies of target MolTransforms
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 25%] Building CXX object Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/SubstructMatch.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBSTRUCTMATCH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubstructMatch_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SubstructMatch.dir/SubstructMatch.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Substruct/SubstructMatch.cpp
[ 25%] Building CXX object Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/MolTransforms.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms && /usr/bin/c++  -DMolTransforms_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLTRANSFORMS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolTransforms.dir/MolTransforms.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolTransforms/MolTransforms.cpp
Scanning dependencies of target SmilesParse
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 25%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmilesParse.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SmilesParse.dir/SmilesParse.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmilesParse.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/BadFileException.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory/Trajectory.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/BadFileException.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory/Trajectory.cpp:12:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/BadFileException.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory/Trajectory.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDKit::Snapshot&}; _Tp = RDKit::Snapshot; _Alloc = std::allocator<RDKit::Snapshot>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Snapshot>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(std::vector<_Tp, _Alloc>::const_iterator, const value_type&) [with _Tp = RDKit::Snapshot; _Alloc = std::allocator<RDKit::Snapshot>]':
/usr/include/c++/8/bits/vector.tcc:118:5: note: parameter passing for argument of type 'std::vector<RDKit::Snapshot>::const_iterator' {aka '__gnu_cxx::__normal_iterator<const RDKit::Snapshot*, std::vector<RDKit::Snapshot> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:149:2: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
  _M_realloc_insert(begin() + (__position - cbegin()), __x);
  ^~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory/Trajectory.cpp: In member function 'unsigned int RDKit::Trajectory::insertSnapshot(unsigned int, RDKit::Snapshot)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory/Trajectory.cpp:73:74: note: parameter passing for argument of type 'std::vector<RDKit::Snapshot>::const_iterator' {aka '__gnu_cxx::__normal_iterator<const RDKit::Snapshot*, std::vector<RDKit::Snapshot> >'} changed in GCC 7.1
   return (d_snapshotVect->insert(d_snapshotVect->begin() + snapshotNum, s) -
                                                                          ^
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RWMol.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmilesParse.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmilesParse.cpp:26:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/BadFileException.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory/Trajectory.cpp:12:
/usr/include/c++/8/bits/stl_vector.h: In member function 'unsigned int RDKit::Trajectory::addConformersToMol(RDKit::ROMol&, int, int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 25%] Linking CXX shared library ../../../lib/libRDKitTrajectory.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory && /usr/bin/cmake -E cmake_link_script CMakeFiles/Trajectory.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitTrajectory.so.1 -o ../../../lib/libRDKitTrajectory.so.1.2018.09.1 CMakeFiles/Trajectory.dir/Trajectory.cpp.o ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
/usr/include/c++/8/bits/vector.tcc: In function 'RDKit::RWMol* RDKit::SmilesToMol(const string&, const RDKit::SmilesParserParams&)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../lib/libRDKitTrajectory.so.1 ../../../lib/libRDKitTrajectory.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 25%] Built target Trajectory
[ 26%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmilesParseOps.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SmilesParse.dir/SmilesParseOps.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmilesParseOps.cpp
[ 26%] Linking CXX shared library ../../../lib/libRDKitMolTransforms.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolTransforms.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitMolTransforms.so.1 -o ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 CMakeFiles/MolTransforms.dir/MolTransforms.cpp.o ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1 ../../../lib/libRDKitMolTransforms.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 26%] Built target MolTransforms
[ 26%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmilesWrite.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SmilesParse.dir/SmilesWrite.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmilesWrite.cpp
[ 26%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmartsWrite.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SmilesParse.dir/SmartsWrite.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmartsWrite.cpp
[ 26%] Building CXX object Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/SubstructUtils.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBSTRUCTMATCH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubstructMatch_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SubstructMatch.dir/SubstructUtils.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Substruct/SubstructUtils.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmilesWrite.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmilesWrite.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmilesParseOps.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function.hpp:30,
                 from /usr/include/boost/algorithm/string/detail/find_iterator.hpp:18,
                 from /usr/include/boost/algorithm/string/find_iterator.hpp:24,
                 from /usr/include/boost/algorithm/string/iter_find.hpp:27,
                 from /usr/include/boost/algorithm/string/split.hpp:16,
                 from /usr/include/boost/algorithm/string.hpp:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmartsWrite.cpp:13:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void RDKit::Dict::setPODVal(const string&, T) [with T = int]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
make -f Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/DependInfo.cmake --color=
Scanning dependencies of target Subgraphs
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 26%] Building CXX object Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/Subgraphs.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBGRAPHS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubgraphs_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Subgraphs.dir/Subgraphs.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs/Subgraphs.cpp
[ 26%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/CXSmilesOps.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SmilesParse.dir/CXSmilesOps.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/CXSmilesOps.cpp
make -f Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PartialCharges /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/DependInfo.cmake --color=
Scanning dependencies of target PartialCharges
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 26%] Building CXX object Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/GasteigerCharges.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges && /usr/bin/c++  -DPartialCharges_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_PARTIALCHARGES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/PartialCharges.dir/GasteigerCharges.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PartialCharges/GasteigerCharges.cpp
[ 26%] Linking CXX shared library ../../../lib/libRDKitSubstructMatch.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/cmake -E cmake_link_script CMakeFiles/SubstructMatch.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitSubstructMatch.so.1 -o ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 CMakeFiles/SubstructMatch.dir/SubstructMatch.cpp.o CMakeFiles/SubstructMatch.dir/SubstructUtils.cpp.o ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1 ../../../lib/libRDKitSubstructMatch.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 26%] Built target SubstructMatch
[ 26%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/smarts.tab.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SmilesParse.dir/smarts.tab.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/smarts.tab.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PartialCharges/GasteigerCharges.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PartialCharges/GasteigerCharges.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
smarts.yy: In function 'void yysmarts_error(const char*, std::vector<RDKit::RWMol*>*, RDKit::Atom*&, RDKit::Bond*&, void*, int, const char*)':
smarts.yy:24:29: warning: unused parameter 'input' [-Wunused-parameter]
smarts.yy:25:46: warning: unused parameter 'ms' [-Wunused-parameter]
smarts.yy:26:31: warning: unused parameter 'lastAtom' [-Wunused-parameter]
smarts.yy:27:31: warning: unused parameter 'lastBond' [-Wunused-parameter]
smarts.yy:28:9: warning: unused parameter 'scanner' [-Wunused-parameter]
smarts.yy:28:21: warning: unused parameter 'start_token' [-Wunused-parameter]
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PartialCharges/GasteigerCharges.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PartialCharges/GasteigerCharges.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In function 'void RDKit::computeGasteigerCharges(const RDKit::ROMol&, std::vector<double>&, int, bool)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function.hpp:30,
                 from /usr/include/boost/algorithm/string/detail/find_iterator.hpp:18,
                 from /usr/include/boost/algorithm/string/find_iterator.hpp:24,
                 from /usr/include/boost/algorithm/string/iter_find.hpp:27,
                 from /usr/include/boost/algorithm/string/split.hpp:16,
                 from /usr/include/boost/algorithm/string.hpp:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/CXSmilesOps.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
[ 26%] Building CXX object Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/GasteigerParams.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges && /usr/bin/c++  -DPartialCharges_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_PARTIALCHARGES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/PartialCharges.dir/GasteigerParams.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PartialCharges/GasteigerParams.cpp
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function.hpp:30,
                 from /usr/include/boost/algorithm/string/detail/find_iterator.hpp:18,
                 from /usr/include/boost/algorithm/string/find_iterator.hpp:24,
                 from /usr/include/boost/algorithm/string/iter_find.hpp:27,
                 from /usr/include/boost/algorithm/string/split.hpp:16,
                 from /usr/include/boost/algorithm/string.hpp:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/CXSmilesOps.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function.hpp:30,
                 from /usr/include/boost/algorithm/string/detail/find_iterator.hpp:18,
                 from /usr/include/boost/algorithm/string/find_iterator.hpp:24,
                 from /usr/include/boost/algorithm/string/iter_find.hpp:27,
                 from /usr/include/boost/algorithm/string/split.hpp:16,
                 from /usr/include/boost/algorithm/string.hpp:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/CXSmilesOps.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 26%] Building CXX object Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/SubgraphUtils.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBGRAPHS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubgraphs_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Subgraphs.dir/SubgraphUtils.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs/SubgraphUtils.cpp
In file included from /usr/include/c++/8/vector:69,
                 from smarts.yy:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function.hpp:30,
                 from /usr/include/boost/algorithm/string/detail/find_iterator.hpp:18,
                 from /usr/include/boost/algorithm/string/find_iterator.hpp:24,
                 from /usr/include/boost/algorithm/string/iter_find.hpp:27,
                 from /usr/include/boost/algorithm/string/split.hpp:16,
                 from /usr/include/boost/algorithm/string.hpp:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/CXSmilesOps.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In function 'bool SmilesParseOps::parser::parse_coords(Iterator&, Iterator, RDKit::RWMol&) [with Iterator = __gnu_cxx::__normal_iterator<const char*, std::__cxx11::basic_string<char> >]':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 26%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/smiles.tab.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SmilesParse.dir/smiles.tab.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/smiles.tab.cpp
make -f Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build.make Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolTransforms/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMolTransforms
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build.make Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 26%] Building CXX object Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/rdMolTransforms.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolTransforms_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMolTransforms.dir/rdMolTransforms.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolTransforms/Wrap/rdMolTransforms.cpp
[ 26%] Linking CXX shared library ../../../lib/libRDKitPartialCharges.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges && /usr/bin/cmake -E cmake_link_script CMakeFiles/PartialCharges.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitPartialCharges.so.1 -o ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 CMakeFiles/PartialCharges.dir/GasteigerCharges.cpp.o CMakeFiles/PartialCharges.dir/GasteigerParams.cpp.o ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1 ../../../lib/libRDKitPartialCharges.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 26%] Built target PartialCharges
[ 27%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/lex.yysmarts.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SmilesParse.dir/lex.yysmarts.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/lex.yysmarts.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs/Subgraphs.h:32,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs/SubgraphUtils.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs/SubgraphUtils.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs/Subgraphs.h:32,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs/SubgraphUtils.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs/SubgraphUtils.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
smiles.yy: In function 'void yysmiles_error(const char*, std::vector<RDKit::RWMol*>*, RDKit::Atom*&, RDKit::Bond*&, std::__cxx11::list<unsigned int>*, void*, int, const char*)':
smiles.yy:38:29: warning: unused parameter 'input' [-Wunused-parameter]
smiles.yy:40:31: warning: unused parameter 'lastAtom' [-Wunused-parameter]
smiles.yy:41:31: warning: unused parameter 'lastBond' [-Wunused-parameter]
smiles.yy:42:42: warning: unused parameter 'branchPoints' [-Wunused-parameter]
smiles.yy:43:9: warning: unused parameter 'scanner' [-Wunused-parameter]
smiles.yy:43:21: warning: unused parameter 'start_token' [-Wunused-parameter]
smiles.yy: In function 'void yysmiles_error(const char*, std::vector<RDKit::RWMol*>*, std::__cxx11::list<unsigned int>*, void*, int, const char*)':
smiles.yy:50:29: warning: unused parameter 'input' [-Wunused-parameter]
smiles.yy:52:42: warning: unused parameter 'branchPoints' [-Wunused-parameter]
smiles.yy:53:9: warning: unused parameter 'scanner' [-Wunused-parameter]
smiles.yy:53:21: warning: unused parameter 'start_token' [-Wunused-parameter]
/usr/include/c++/8/bits/stl_vector.h: In function 'RDKit::ROMol* RDKit::Subgraphs::pathToSubmol(const RDKit::ROMol&, const PATH_TYPE&, bool, RDKit::INT_MAP_INT&)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 27%] Linking CXX shared library ../../../lib/libRDKitSubgraphs.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/cmake -E cmake_link_script CMakeFiles/Subgraphs.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitSubgraphs.so.1 -o ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 CMakeFiles/Subgraphs.dir/Subgraphs.cpp.o CMakeFiles/Subgraphs.dir/SubgraphUtils.cpp.o ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1 ../../../lib/libRDKitSubgraphs.so
In file included from /usr/include/c++/8/vector:69,
                 from smiles.yy:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 27%] Built target Subgraphs
[ 27%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/lex.yysmiles.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SmilesParse.dir/lex.yysmiles.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/lex.yysmiles.cpp
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
make -f Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/DependInfo.cmake --color=
Scanning dependencies of target ShapeHelpers
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 27%] Building CXX object Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/ShapeEncoder.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SHAPEHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DShapeHelpers_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ShapeHelpers.dir/ShapeEncoder.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers/ShapeEncoder.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from smiles.ll:25:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'int yysmiles_lex(YYSTYPE*, yyscan_t, int&)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
make -f Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/DependInfo.cmake --color=
Scanning dependencies of target MolCatalog
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 27%] Building CXX object Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/MolCatalogEntry.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog && /usr/bin/c++  -DMolCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolCatalog.dir/MolCatalogEntry.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolCatalog/MolCatalogEntry.cpp
[ 27%] Linking CXX shared library ../../../lib/libRDKitSmilesParse.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/SmilesParse.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitSmilesParse.so.1 -o ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 CMakeFiles/SmilesParse.dir/SmilesParse.cpp.o CMakeFiles/SmilesParse.dir/SmilesParseOps.cpp.o CMakeFiles/SmilesParse.dir/SmilesWrite.cpp.o CMakeFiles/SmilesParse.dir/SmartsWrite.cpp.o CMakeFiles/SmilesParse.dir/CXSmilesOps.cpp.o CMakeFiles/SmilesParse.dir/smarts.tab.cpp.o CMakeFiles/SmilesParse.dir/smiles.tab.cpp.o CMakeFiles/SmilesParse.dir/lex.yysmarts.cpp.o CMakeFiles/SmilesParse.dir/lex.yysmiles.cpp.o ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1 ../../../lib/libRDKitSmilesParse.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 27%] Built target SmilesParse
make -f Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolInterchange /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/DependInfo.cmake --color=
Scanning dependencies of target MolInterchange
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 27%] Building CXX object Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/Parser.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange && /usr/bin/c++  -DMolInterchange_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLINTERCHANGE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/rapidjson -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolInterchange.dir/Parser.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolInterchange/Parser.cpp
[ 27%] Building CXX object Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/ShapeUtils.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SHAPEHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DShapeHelpers_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ShapeHelpers.dir/ShapeUtils.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers/ShapeUtils.cpp
[ 27%] Linking CXX shared module ../../../../rdkit/Chem/rdMolTransforms.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolTransforms.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdMolTransforms.so CMakeFiles/rdMolTransforms.dir/rdMolTransforms.cpp.o ../../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 27%] Built target rdMolTransforms
[ 27%] Building CXX object Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/Writer.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange && /usr/bin/c++  -DMolInterchange_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLINTERCHANGE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/rapidjson -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolInterchange.dir/Writer.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolInterchange/Writer.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers/ShapeUtils.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers/ShapeUtils.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers/ShapeUtils.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers/ShapeUtils.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In function 'std::vector<double> RDKit::MolShapes::getConfDimensions(const RDKit::Conformer&, double, const RDGeom::Point3D*, bool)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
[ 28%] Linking CXX shared library ../../../lib/libRDKitShapeHelpers.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/ShapeHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitShapeHelpers.so.1 -o ../../../lib/libRDKitShapeHelpers.so.1.2018.09.1 CMakeFiles/ShapeHelpers.dir/ShapeEncoder.cpp.o CMakeFiles/ShapeHelpers.dir/ShapeUtils.cpp.o ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitShapeHelpers.so.1.2018.09.1 ../../../lib/libRDKitShapeHelpers.so.1 ../../../lib/libRDKitShapeHelpers.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 28%] Built target ShapeHelpers
make -f Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/DependInfo.cmake --color=
Scanning dependencies of target SLNParse
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 28%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/SLNParse.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SLNPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSLNParse_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SLNParse.dir/SLNParse.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse/SLNParse.cpp
[ 29%] Building CXX object Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/MolCatalogParams.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog && /usr/bin/c++  -DMolCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolCatalog.dir/MolCatalogParams.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolCatalog/MolCatalogParams.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolInterchange/Parser.cpp:16:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolInterchange/Parser.cpp:16:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolInterchange/Parser.cpp:16:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 29%] Linking CXX shared library ../../../lib/libRDKitMolCatalog.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolCatalog.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitMolCatalog.so.1 -o ../../../lib/libRDKitMolCatalog.so.1.2018.09.1 CMakeFiles/MolCatalog.dir/MolCatalogEntry.cpp.o CMakeFiles/MolCatalog.dir/MolCatalogParams.cpp.o ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolCatalog.so.1.2018.09.1 ../../../lib/libRDKitMolCatalog.so.1 ../../../lib/libRDKitMolCatalog.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 29%] Built target MolCatalog
make -f Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/DependInfo.cmake --color=
Scanning dependencies of target rdtrajectory
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 29%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/Trajectory.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdtrajectory_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdtrajectory.dir/Trajectory.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/Trajectory.cpp
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolInterchange/Parser.cpp:16:
/usr/include/c++/8/bits/stl_vector.h: In function 'std::vector<boost::shared_ptr<RDKit::ROMol> > RDKit::MolInterchange::{anonymous}::DocToMols(rapidjson::Document&, const RDKit::MolInterchange::JSONParseParameters&)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
make -f Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/DependInfo.cmake --color=
Scanning dependencies of target rdqueries
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 29%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/rdqueries.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdqueries_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdqueries.dir/rdqueries.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/rdqueries.cpp
[ 29%] Linking CXX shared library ../../../lib/libRDKitMolInterchange.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolInterchange.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitMolInterchange.so.1 -o ../../../lib/libRDKitMolInterchange.so.1.2018.09.1 CMakeFiles/MolInterchange.dir/Parser.cpp.o CMakeFiles/MolInterchange.dir/Writer.cpp.o ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolInterchange.so.1.2018.09.1 ../../../lib/libRDKitMolInterchange.so.1 ../../../lib/libRDKitMolInterchange.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 29%] Built target MolInterchange
[ 29%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/rdTrajectory.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdtrajectory_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdtrajectory.dir/rdTrajectory.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/rdTrajectory.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse/SLNParse.cpp:35:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'void RDKit::SLNParse::finalizeQueryMol(RDKit::ROMol*, bool)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
make -f Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build.make Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ChemicalFeatures/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/DependInfo.cmake --color=
Scanning dependencies of target rdChemicalFeatures
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build.make Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 29%] Building CXX object Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/rdChemicalFeatures.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdChemicalFeatures_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdChemicalFeatures.dir/rdChemicalFeatures.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ChemicalFeatures/Wrap/rdChemicalFeatures.cpp
[ 30%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/Queries.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdqueries_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdqueries.dir/Queries.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/Queries.cpp
[ 31%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/SLNAttribs.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SLNPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSLNParse_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SLNParse.dir/SLNAttribs.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse/SLNAttribs.cpp
[ 31%] Linking CXX shared module ../../../rdkit/Chem/rdtrajectory.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdtrajectory.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../rdkit/Chem/rdtrajectory.so CMakeFiles/rdtrajectory.dir/Trajectory.cpp.o CMakeFiles/rdtrajectory.dir/rdTrajectory.cpp.o ../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 31%] Built target rdtrajectory
[ 31%] Building CXX object Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/FreeChemicalFeature.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdChemicalFeatures_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdChemicalFeatures.dir/FreeChemicalFeature.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ChemicalFeatures/Wrap/FreeChemicalFeature.cpp
[ 31%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/sln.tab.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SLNPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSLNParse_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SLNParse.dir/sln.tab.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse/sln.tab.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse/SLNAttribs.h:39,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse/SLNAttribs.cpp:37:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
sln.yy: In function 'void yysln_error(const char*, std::vector<RDKit::RWMol*>*, bool, void*, const char*)':
sln.yy:60:43: warning: unused parameter 'ms' [-Wunused-parameter]
sln.yy:60:51: warning: unused parameter 'doQ' [-Wunused-parameter]
sln.yy:61:13: warning: unused parameter 'scanner' [-Wunused-parameter]
make -f Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Optimizer /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/DependInfo.cmake --color=
Scanning dependencies of target Optimizer
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 31%] Building CXX object Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/BFGSOpt.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer && /usr/bin/c++  -DOptimizer_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_OPTIMIZER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Optimizer.dir/BFGSOpt.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Optimizer/BFGSOpt.cpp
[ 31%] Linking CXX shared module ../../../rdkit/Chem/rdChemicalFeatures.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdChemicalFeatures.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../rdkit/Chem/rdChemicalFeatures.so CMakeFiles/rdChemicalFeatures.dir/rdChemicalFeatures.cpp.o CMakeFiles/rdChemicalFeatures.dir/FreeChemicalFeature.cpp.o ../../../lib/libRDKitChemicalFeatures.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 31%] Built target rdChemicalFeatures
[ 31%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/lex.yysln.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SLNPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSLNParse_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SLNParse.dir/lex.yysln.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse/lex.yysln.cpp
In file included from /usr/include/c++/8/vector:69,
                 from sln.yy:43:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 31%] Building CXX object Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/LinearSearch.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer && /usr/bin/c++  -DOptimizer_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_OPTIMIZER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Optimizer.dir/LinearSearch.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Optimizer/LinearSearch.cpp
/Users/landrgr1/RDKit_git/Code/GraphMol/SLNParse/lex.yysln.cpp: In function 'void yy_fatal_error(const char*, yyscan_t)':
/Users/landrgr1/RDKit_git/Code/GraphMol/SLNParse/lex.yysln.cpp:2585:58: warning: unused parameter 'yyscanner' [-Wunused-parameter]
/Users/landrgr1/RDKit_git/Code/GraphMol/SLNParse/lex.yysln.cpp: In function 'void* yysln_alloc(yy_size_t, yyscan_t)':
/Users/landrgr1/RDKit_git/Code/GraphMol/SLNParse/lex.yysln.cpp:2917:47: warning: unused parameter 'yyscanner' [-Wunused-parameter]
/Users/landrgr1/RDKit_git/Code/GraphMol/SLNParse/lex.yysln.cpp: In function 'void* yysln_realloc(void*, yy_size_t, yyscan_t)':
/Users/landrgr1/RDKit_git/Code/GraphMol/SLNParse/lex.yysln.cpp:2922:62: warning: unused parameter 'yyscanner' [-Wunused-parameter]
/Users/landrgr1/RDKit_git/Code/GraphMol/SLNParse/lex.yysln.cpp: In function 'void yysln_free(void*, yyscan_t)':
/Users/landrgr1/RDKit_git/Code/GraphMol/SLNParse/lex.yysln.cpp:2934:40: warning: unused parameter 'yyscanner' [-Wunused-parameter]
make -f Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/DependInfo.cmake --color=
Scanning dependencies of target Depictor
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 31%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/RDDepictor.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/c++  -DDepictor_EXPORTS -DRDKIT_DEPICTOR_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Depictor.dir/RDDepictor.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/RDDepictor.cpp
[ 32%] Linking CXX shared library ../../../lib/libRDKitOptimizer.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer && /usr/bin/cmake -E cmake_link_script CMakeFiles/Optimizer.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitOptimizer.so.1 -o ../../../lib/libRDKitOptimizer.so.1.2018.09.1 CMakeFiles/Optimizer.dir/BFGSOpt.cpp.o CMakeFiles/Optimizer.dir/LinearSearch.cpp.o ../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../lib/libRDKitOptimizer.so.1 ../../../lib/libRDKitOptimizer.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 32%] Built target Optimizer
[ 32%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/EmbeddedFrag.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/c++  -DDepictor_EXPORTS -DRDKIT_DEPICTOR_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Depictor.dir/EmbeddedFrag.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/EmbeddedFrag.cpp
[ 32%] Linking CXX shared library ../../../lib/libRDKitSLNParse.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/SLNParse.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitSLNParse.so.1 -o ../../../lib/libRDKitSLNParse.so.1.2018.09.1 CMakeFiles/SLNParse.dir/SLNParse.cpp.o CMakeFiles/SLNParse.dir/SLNAttribs.cpp.o CMakeFiles/SLNParse.dir/sln.tab.cpp.o CMakeFiles/SLNParse.dir/lex.yysln.cpp.o ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitSLNParse.so.1.2018.09.1 ../../../lib/libRDKitSLNParse.so.1 ../../../lib/libRDKitSLNParse.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 32%] Built target SLNParse
[ 33%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/DepictUtils.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/c++  -DDepictor_EXPORTS -DRDKIT_DEPICTOR_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Depictor.dir/DepictUtils.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/DepictUtils.cpp
[ 33%] Linking CXX shared module ../../../rdkit/Chem/rdqueries.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdqueries.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../rdkit/Chem/rdqueries.so CMakeFiles/rdqueries.dir/rdqueries.cpp.o CMakeFiles/rdqueries.dir/Queries.cpp.o ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization -lcoordgenlibs -lmaeparser ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 33%] Built target rdqueries
make -f Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/DependInfo.cmake --color=
Scanning dependencies of target graphmolqueryTest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 34%] Building CXX object Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/querytest.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/graphmolqueryTest.dir/querytest.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/querytest.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/RDDepictor.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/RDDepictor.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/RDDepictor.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/RDDepictor.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In function 'unsigned int RDDepict::copyCoordinate(RDKit::ROMol&, std::__cxx11::list<RDDepict::EmbeddedFrag>&, bool)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In function 'unsigned int RDKit::CoordGen::addCoords(T&, const RDKit::CoordGen::CoordGenParams*) [with T = RDKit::ROMol]':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/DepictUtils.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDGeom::Point2D&}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point2D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In function 'unsigned int RDDepict::compute2DCoords(RDKit::ROMol&, const INT_POINT2D_MAP*, bool, bool, unsigned int, unsigned int, int, bool, bool)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/DepictUtils.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In function 'RDDepict::INT_PAIR_VECT RDDepict::findBondsPairsToPermuteDeg4(const RDGeom::Point2D&, const INT_VECT&, const VECT_C_POINT&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
make -f Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolcpTest.dir/depend
In file included from /usr/include/c++/8/map:60,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/EmbeddedFrag.cpp:10:
/usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = unsigned int; _Val = std::pair<const unsigned int, RDDepict::EmbeddedAtom>; _KeyOfValue = std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]':
/usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolcpTest.dir/DependInfo.cmake --color=
/usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const unsigned int&>, std::tuple<>}; _Key = unsigned int; _Val = std::pair<const unsigned int, RDDepict::EmbeddedAtom>; _KeyOfValue = std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Scanning dependencies of target graphmolcpTest
In file included from /usr/include/c++/8/map:61,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/EmbeddedFrag.cpp:10:
/usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 34%] Building CXX object Code/GraphMol/CMakeFiles/graphmolcpTest.dir/cptest.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/graphmolcpTest.dir/cptest.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/cptest.cpp
/usr/include/c++/8/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::reflectIfNecessaryThirdPt(RDDepict::EmbeddedFrag&, unsigned int, unsigned int, unsigned int)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In member function 'RDGeom::Transform2D RDDepict::EmbeddedFrag::computeTwoAtomTrans(unsigned int, unsigned int, const INT_POINT2D_MAP&)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::reflectIfNecessaryDensity(RDDepict::EmbeddedFrag&, unsigned int, unsigned int)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::updateNewNeighs(unsigned int)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::openAngles(const double*, unsigned int, unsigned int)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In constructor 'RDDepict::EmbeddedFrag::EmbeddedFrag(unsigned int, const RDKit::ROMol*)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/8/map:60,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/EmbeddedFrag.cpp:10:
/usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<unsigned int&&>, std::tuple<>}; _Key = unsigned int; _Val = std::pair<const unsigned int, RDDepict::EmbeddedAtom>; _KeyOfValue = std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:61,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/EmbeddedFrag.cpp:10:
/usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](std::map<_Key, _Tp, _Compare, _Alloc>::key_type&&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::addAtomToAtomWithAng(unsigned int, unsigned int)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::permuteBonds(unsigned int, unsigned int, unsigned int)':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::initFromRingCoords(const INT_VECT&, const INT_POINT2D_MAP&)':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::flipAboutBond(unsigned int, bool)':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::computeNbrsAndAng(unsigned int, const INT_VECT&)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::reflectIfNecessaryCisTrans(RDDepict::EmbeddedFrag&, unsigned int, unsigned int, unsigned int)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::mergeRing(const RDDepict::EmbeddedFrag&, unsigned int, const INT_VECT&)':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In constructor 'RDDepict::EmbeddedFrag::EmbeddedFrag(const RDKit::ROMol*, const INT_POINT2D_MAP&)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In member function 'RDGeom::Transform2D RDDepict::EmbeddedFrag::computeOneAtomTrans(unsigned int, const RDDepict::EmbeddedFrag&)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/querytest.cpp:13:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::mergeFragsWithComm(std::__cxx11::list<RDDepict::EmbeddedFrag>&)':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
make -f Code/GraphMol/CMakeFiles/graphmoltestCanon.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestCanon.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestCanon.dir/DependInfo.cmake --color=
/usr/include/c++/8/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::expandEfrag(RDKit::INT_LIST&, std::__cxx11::list<RDDepict::EmbeddedFrag>&)':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
Scanning dependencies of target graphmoltestCanon
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmoltestCanon.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestCanon.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 34%] Building CXX object Code/GraphMol/CMakeFiles/graphmoltestCanon.dir/testCanon.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/graphmoltestCanon.dir/testCanon.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/testCanon.cpp
/usr/include/c++/8/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::removeCollisionsShortenBonds()':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::randomSampleFlipsAndPermutations(unsigned int, unsigned int, int, const DOUBLE_SMART_PTR*, double, bool)':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 34%] Linking CXX shared library ../../../lib/libRDKitDepictor.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/cmake -E cmake_link_script CMakeFiles/Depictor.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitDepictor.so.1 -o ../../../lib/libRDKitDepictor.so.1.2018.09.1 CMakeFiles/Depictor.dir/RDDepictor.cpp.o CMakeFiles/Depictor.dir/EmbeddedFrag.cpp.o CMakeFiles/Depictor.dir/DepictUtils.cpp.o ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lcoordgenlibs -lmaeparser -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1 ../../../lib/libRDKitDepictor.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 34%] Built target Depictor
make -f Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/DependInfo.cmake --color=
Scanning dependencies of target graphmolMemTest1
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 34%] Building CXX object Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/memtest1.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/graphmolMemTest1.dir/memtest1.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/memtest1.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/cptest.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/cptest.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/testCanon.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'void permuteAtoms(RDKit::RWMol*)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 34%] Linking CXX executable graphmolcpTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolcpTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/graphmolcpTest.dir/cptest.cpp.o  -o graphmolcpTest ../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 34%] Built target graphmolcpTest
make -f Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolIterTest.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolIterTest.dir/DependInfo.cmake --color=
Scanning dependencies of target graphmolIterTest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 35%] Building CXX object Code/GraphMol/CMakeFiles/graphmolIterTest.dir/itertest.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/graphmolIterTest.dir/itertest.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/itertest.cpp
[ 35%] Linking CXX executable graphmolqueryTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolqueryTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/graphmolqueryTest.dir/querytest.cpp.o  -o graphmolqueryTest ../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 35%] Linking CXX executable graphmoltestCanon
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmoltestCanon.dir/link.txt --verbose=1
[ 35%] Built target graphmolqueryTest
make -f Code/GraphMol/CMakeFiles/test-valgrind.dir/build.make Code/GraphMol/CMakeFiles/test-valgrind.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/test-valgrind.dir/DependInfo.cmake --color=
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/graphmoltestCanon.dir/testCanon.cpp.o  -o graphmoltestCanon ../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
Scanning dependencies of target test-valgrind
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/test-valgrind.dir/build.make Code/GraphMol/CMakeFiles/test-valgrind.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 36%] Building CXX object Code/GraphMol/CMakeFiles/test-valgrind.dir/test-valgrind.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/test-valgrind.dir/test-valgrind.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/test-valgrind.cpp
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 36%] Built target graphmoltestCanon
make -f Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/DependInfo.cmake --color=
Scanning dependencies of target ChemTransforms
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 36%] Building CXX object Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/ChemTransforms.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/c++  -DChemTransforms_EXPORTS -DRDKIT_CHEMTRANSFORMS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ChemTransforms.dir/ChemTransforms.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/ChemTransforms.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/memtest1.cpp:13:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 36%] Linking CXX executable graphmolMemTest1
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolMemTest1.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/graphmolMemTest1.dir/memtest1.cpp.o  -o graphmolMemTest1 ../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 36%] Built target graphmolMemTest1
make -f Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/DependInfo.cmake --color=
Scanning dependencies of target smaTest1
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 36%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/smatest.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/smaTest1.dir/smatest.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/smatest.cpp
[ 36%] Linking CXX executable test-valgrind
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-valgrind.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/test-valgrind.dir/test-valgrind.cpp.o  -o test-valgrind ../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 36%] Built target test-valgrind
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/DependInfo.cmake --color=
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/ChemTransforms.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
Scanning dependencies of target smiTest2
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 37%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/test2.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/smiTest2.dir/test2.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/test2.cpp
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/ChemTransforms.cpp:10:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In function 'void RDKit::{anonymous}::updateSubMolConfs(const RDKit::ROMol&, RDKit::RWMol&, boost::dynamic_bitset<>&)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In function 'RDKit::ROMol* RDKit::combineMols(const RDKit::ROMol&, const RDKit::ROMol&, RDGeom::Point3D)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 37%] Linking CXX executable graphmolIterTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolIterTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/graphmolIterTest.dir/itertest.cpp.o  -o graphmolIterTest ../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 37%] Built target graphmolIterTest
make -f Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/DependInfo.cmake --color=
Scanning dependencies of target FilterCatalog
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 38%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/Filters.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++  -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FilterCatalog.dir/Filters.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/Filters.cpp
/usr/include/c++/8/bits/stl_vector.h: In function 'RDKit::ROMol* RDKit::replaceCore(const RDKit::ROMol&, const RDKit::ROMol&, const MatchVectType&, bool, bool, bool)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 38%] Building CXX object Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/MolFragmenter.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/c++  -DChemTransforms_EXPORTS -DRDKIT_CHEMTRANSFORMS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ChemTransforms.dir/MolFragmenter.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/MolFragmenter.cpp
[ 38%] Linking CXX executable smiTest2
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/smiTest2.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/smiTest2.dir/test2.cpp.o  -o smiTest2 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 38%] Built target smiTest2
[ 38%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FilterCatalog.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++  -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FilterCatalog.dir/FilterCatalog.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterCatalog.cpp
make -f Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/DependInfo.cmake --color=
Scanning dependencies of target Fingerprints
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 39%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/Fingerprints.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Fingerprints.dir/Fingerprints.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Fingerprints.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/MolFragmenter.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/MolFragmenter.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/MolFragmenter.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/MolFragmenter.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In function 'RDKit::ROMol* RDKit::MolFragmenter::fragmentOnBonds(const RDKit::ROMol&, const std::vector<unsigned int>&, bool, const std::vector<std::pair<unsigned int, unsigned int> >*, const std::vector<RDKit::Bond::BondType>*, std::vector<unsigned int>*)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDLog.h:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Invariant.h:22,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Fingerprints.cpp:11:
/usr/include/c++/8/bits/stl_algo.h: In function '_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const unsigned int>]':
/usr/include/c++/8/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
     __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last,
     ^~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Fingerprints.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/set:60,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/SetQuery.h:13,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:29,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Fingerprints.cpp:11:
/usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<long long unsigned int&&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::vector<std::vector<int> > >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<std::vector<int> > >, std::_Select1st<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<std::vector<int> > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >'} changed in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDLog.h:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Invariant.h:22,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Fingerprints.cpp:11:
/usr/include/c++/8/bits/stl_algo.h: In function 'RDKit::SparseIntVect<long long unsigned int>* RDKit::getUnfoldedRDKFingerprintMol(const RDKit::ROMol&, unsigned int, unsigned int, bool, bool, bool, std::vector<unsigned int>*, const std::vector<unsigned int>*, std::vector<std::vector<long long unsigned int> >*, std::map<long long unsigned int, std::vector<std::vector<int> > >*)':
/usr/include/c++/8/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
       return __find_if(__first, __last, __pred,
              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
          std::__iterator_category(__first));
          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Fingerprints.cpp:11:
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:61,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:26,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Fingerprints.cpp:11:
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<std::vector<int> > >, std::_Select1st<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<std::vector<int> > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Fingerprints.cpp:812:1: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
 }
 ^
[ 40%] Linking CXX shared library ../../../lib/libRDKitChemTransforms.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/cmake -E cmake_link_script CMakeFiles/ChemTransforms.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitChemTransforms.so.1 -o ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 CMakeFiles/ChemTransforms.dir/ChemTransforms.cpp.o CMakeFiles/ChemTransforms.dir/MolFragmenter.cpp.o ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
[ 40%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/PatternFingerprints.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Fingerprints.dir/PatternFingerprints.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/PatternFingerprints.cpp
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1 ../../../lib/libRDKitChemTransforms.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 40%] Built target ChemTransforms
make -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/DependInfo.cmake --color=
Scanning dependencies of target testSubgraphs1
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 40%] Building CXX object Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/test1.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBGRAPHS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testSubgraphs1.dir/test1.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs/test1.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs/Catalog.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterCatalog.h:36,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterCatalog.cpp:32:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void boost::archive::detail::iserializer<Archive, T>::load_object_data(boost::archive::detail::basic_iarchive&, void*, unsigned int) const [with Archive = boost::archive::text_iarchive; T = RDKit::FilterCatalogEntry]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 40%] Linking CXX executable smaTest1
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/smaTest1.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/smaTest1.dir/smatest.cpp.o  -o smaTest1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lcoordgenlibs -lmaeparser -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 40%] Built target smaTest1
make -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/DependInfo.cmake --color=
Scanning dependencies of target testSubgraphs2
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 40%] Building CXX object Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/test2.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBGRAPHS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testSubgraphs2.dir/test2.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs/test2.cpp
[ 40%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FilterCatalogEntry.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++  -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FilterCatalog.dir/FilterCatalogEntry.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterCatalogEntry.cpp
[ 40%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/MorganFingerprints.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Fingerprints.dir/MorganFingerprints.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganFingerprints.cpp
[ 40%] Linking CXX executable testSubgraphs1
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSubgraphs1.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testSubgraphs1.dir/test1.cpp.o  -o testSubgraphs1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 40%] Built target testSubgraphs1
[ 40%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FilterMatchers.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++  -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FilterCatalog.dir/FilterMatchers.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatchers.cpp
[ 41%] Linking CXX executable testSubgraphs2
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSubgraphs2.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testSubgraphs2.dir/test2.cpp.o  -o testSubgraphs2 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 41%] Built target testSubgraphs2
[ 41%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/AtomPairs.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Fingerprints.dir/AtomPairs.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairs.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterCatalogEntry.h:36,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/Filters.h:36,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterCatalogEntry.cpp:32:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 41%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FunctionalGroupHierarchy.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++  -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FilterCatalog.dir/FunctionalGroupHierarchy.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FunctionalGroupHierarchy.cpp
make -f Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/DependInfo.cmake --color=
Scanning dependencies of target FragCatalog
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 41%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatalogUtils.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/c++  -DFragCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FragCatalog.dir/FragCatalogUtils.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatalogUtils.cpp
In file included from /usr/include/c++/8/set:60,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/SetQuery.h:13,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:29,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairs.cpp:11:
/usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long int&>, std::tuple<>}; _Key = long long int; _Val = std::pair<const long long int, int>; _KeyOfValue = std::_Select1st<std::pair<const long long int, int> >; _Compare = std::less<long long int>; _Alloc = std::allocator<std::pair<const long long int, int> >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<long long int, std::pair<const long long int, int>, std::_Select1st<std::pair<const long long int, int> >, std::less<long long int>, std::allocator<std::pair<const long long int, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long int, int> >'} changed in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:61,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:26,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairs.cpp:11:
/usr/include/c++/8/bits/stl_map.h: In function 'RDKit::SparseIntVect<long long int>* RDKit::AtomPairs::getTopologicalTorsionFingerprint(const RDKit::ROMol&, unsigned int, const std::vector<unsigned int>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, bool)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<long long int, std::pair<const long long int, int>, std::_Select1st<std::pair<const long long int, int> >, std::less<long long int>, std::allocator<std::pair<const long long int, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long int, int> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In function 'void RDKit::AtomPairs::{anonymous}::TorsionFpCalc(T*, const RDKit::ROMol&, unsigned int, unsigned int, const std::vector<unsigned int>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, bool) [with T = RDKit::SparseIntVect<long long int>]':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<long long int, std::pair<const long long int, int>, std::_Select1st<std::pair<const long long int, int> >, std::less<long long int>, std::allocator<std::pair<const long long int, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long int, int> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 42%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatGenerator.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/c++  -DFragCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FragCatalog.dir/FragCatGenerator.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatGenerator.cpp
[ 42%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/MACCS.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Fingerprints.dir/MACCS.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MACCS.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/BadFileException.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatalogUtils.cpp:14:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs/Catalog.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterCatalog.h:36,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FunctionalGroupHierarchy.h:36,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FunctionalGroupHierarchy.cpp:33:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'void RDKit::{anonymous}::hierarchy_create()':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'RDKit::ROMol* RDKit::{anonymous}::getSmarts(const string&)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 42%] Linking CXX shared library ../../../lib/libRDKitFilterCatalog.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/FilterCatalog.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitFilterCatalog.so.1 -o ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 CMakeFiles/FilterCatalog.dir/Filters.cpp.o CMakeFiles/FilterCatalog.dir/FilterCatalog.cpp.o CMakeFiles/FilterCatalog.dir/FilterCatalogEntry.cpp.o CMakeFiles/FilterCatalog.dir/FilterMatchers.cpp.o CMakeFiles/FilterCatalog.dir/FunctionalGroupHierarchy.cpp.o ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs/Catalog.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/set:60,
                 from /usr/include/boost/graph/adjacency_list.hpp:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs/Catalog.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:11:
/usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const double&>, std::tuple<>}; _Key = double; _Val = std::pair<const double, int>; _KeyOfValue = std::_Select1st<std::pair<const double, int> >; _Compare = RDKit::ltDouble; _Alloc = std::allocator<std::pair<const double, int> >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make -f Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PartialCharges /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/DependInfo.cmake --color=
Scanning dependencies of target testPartialCharges
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 42%] Building CXX object Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/test1.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_PARTIALCHARGES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testPartialCharges.dir/test1.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PartialCharges/test1.cpp
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitFilterCatalog.so.1 ../../../lib/libRDKitFilterCatalog.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 42%] Built target FilterCatalog
[ 42%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/FingerprintGenerator.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Fingerprints.dir/FingerprintGenerator.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp
In file included from /usr/include/c++/8/map:61,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/functional/hash.hpp:6,
                 from /usr/include/boost/unordered/unordered_set.hpp:18,
                 from /usr/include/boost/unordered_set.hpp:17,
                 from /usr/include/boost/graph/adjacency_list.hpp:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs/Catalog.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:11:
/usr/include/c++/8/bits/stl_map.h: In function 'unsigned int RDKit::addOrder1Paths(RDKit::PATH_LIST&, const RDKit::ROMol&, RDKit::FragCatalog*, RDKit::DOUBLE_INT_MAP&, const MatchVectType&)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs/Catalog.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In function 'unsigned int RDKit::addHigherOrderPaths(const INT_PATH_LIST_MAP&, const RDKit::ROMol&, RDKit::FragCatalog*, RDKit::DOUBLE_INT_MAP&, const MatchVectType&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:61,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/functional/hash.hpp:6,
                 from /usr/include/boost/unordered/unordered_set.hpp:18,
                 from /usr/include/boost/unordered_set.hpp:17,
                 from /usr/include/boost/graph/adjacency_list.hpp:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs/Catalog.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:11:
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 42%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatalogEntry.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/c++  -DFragCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FragCatalog.dir/FragCatalogEntry.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatalogEntry.cpp
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp: In instantiation of 'SparseBitVect* RDKit::FingerprintGenerator<OutputType>::getSparseFingerprint(const RDKit::ROMol&, const std::vector<unsigned int>*, const std::vector<unsigned int>*, int, const RDKit::AdditionalOutput*, const std::vector<unsigned int>*, const std::vector<unsigned int>*) const [with OutputType = unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp:329:61:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp:230:24: warning: comparison of integer expressions of different signedness: 'int' and 'const value_type' {aka 'const unsigned int'} [-Wsign-compare]
         if (val.second >= dp_fingerprintArguments->d_countBounds[i]) {
             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp: In instantiation of 'SparseBitVect* RDKit::FingerprintGenerator<OutputType>::getSparseFingerprint(const RDKit::ROMol&, const std::vector<unsigned int>*, const std::vector<unsigned int>*, int, const RDKit::AdditionalOutput*, const std::vector<unsigned int>*, const std::vector<unsigned int>*) const [with OutputType = long long unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp:337:61:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp:230:24: warning: comparison of integer expressions of different signedness: 'int' and 'const value_type' {aka 'const unsigned int'} [-Wsign-compare]
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp: In instantiation of 'ExplicitBitVect* RDKit::FingerprintGenerator<OutputType>::getFingerprint(const RDKit::ROMol&, const std::vector<unsigned int>*, const std::vector<unsigned int>*, int, const RDKit::AdditionalOutput*, const std::vector<unsigned int>*, const std::vector<unsigned int>*) const [with OutputType = unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp:360:61:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp:293:24: warning: comparison of integer expressions of different signedness: 'int' and 'const value_type' {aka 'const unsigned int'} [-Wsign-compare]
         if (val.second >= dp_fingerprintArguments->d_countBounds[i]) {
             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp: In instantiation of 'ExplicitBitVect* RDKit::FingerprintGenerator<OutputType>::getFingerprint(const RDKit::ROMol&, const std::vector<unsigned int>*, const std::vector<unsigned int>*, int, const RDKit::AdditionalOutput*, const std::vector<unsigned int>*, const std::vector<unsigned int>*) const [with OutputType = long long unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp:367:61:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp:293:24: warning: comparison of integer expressions of different signedness: 'int' and 'const value_type' {aka 'const unsigned int'} [-Wsign-compare]
[ 42%] Linking CXX executable testPartialCharges
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges && /usr/bin/cmake -E cmake_link_script CMakeFiles/testPartialCharges.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testPartialCharges.dir/test1.cpp.o  -o testPartialCharges ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 42%] Built target testPartialCharges
[ 42%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatParams.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/c++  -DFragCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FragCatalog.dir/FragCatParams.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatParams.cpp
[ 42%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragFPGenerator.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/c++  -DFragCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FragCatalog.dir/FragFPGenerator.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragFPGenerator.cpp
In file included from /usr/include/c++/8/map:60,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/SparseIntVect.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp:11:
/usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, int>; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, int> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, int> >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, int>, std::_Select1st<std::pair<const long long unsigned int, int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, int> >'} changed in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:61,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/SparseIntVect.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp:11:
/usr/include/c++/8/bits/stl_map.h: In member function 'RDKit::SparseIntVect<IndexType>* RDKit::FingerprintGenerator<OutputType>::getFingerprintHelper(const RDKit::ROMol&, const std::vector<unsigned int>*, const std::vector<unsigned int>*, int, const RDKit::AdditionalOutput*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, uint64_t) const [with OutputType = long long unsigned int]':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, int>, std::_Select1st<std::pair<const long long unsigned int, int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, int> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 43%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/AtomPairGenerator.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Fingerprints.dir/AtomPairGenerator.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatParams.h:16,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatalogEntry.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatalogEntry.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
make -f Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build.make Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PartialCharges/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/DependInfo.cmake --color=
Scanning dependencies of target rdPartialCharges
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build.make Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 44%] Building CXX object Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/rdPartialCharges.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdPartialCharges_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdPartialCharges.dir/rdPartialCharges.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PartialCharges/Wrap/rdPartialCharges.cpp
In file included from /usr/include/c++/8/set:60,
                 from /usr/include/boost/graph/adjacency_list.hpp:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs/Catalog.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragFPGenerator.cpp:11:
/usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const double&>, std::tuple<>}; _Key = double; _Val = std::pair<const double, int>; _KeyOfValue = std::_Select1st<std::pair<const double, int> >; _Compare = RDKit::ltDouble; _Alloc = std::allocator<std::pair<const double, int> >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:61,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/functional/hash.hpp:6,
                 from /usr/include/boost/unordered/unordered_set.hpp:18,
                 from /usr/include/boost/unordered_set.hpp:17,
                 from /usr/include/boost/graph/adjacency_list.hpp:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs/Catalog.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragFPGenerator.cpp:11:
/usr/include/c++/8/bits/stl_map.h: In member function 'void RDKit::FragFPGenerator::computeFP(const RDKit::ROMol&, const FragCatalog&, const MatchVectType&, ExplicitBitVect*)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
make -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/DependInfo.cmake --color=
Scanning dependencies of target MolChemicalFeatures
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 44%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeature.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/c++  -DMolChemicalFeatures_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCHEMICALFEATURES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeature.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/MolChemicalFeature.cpp
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp: In instantiation of 'std::vector<RDKit::AtomEnvironment<OutputType>*> RDKit::AtomPair::AtomPairEnvGenerator<OutputType>::getEnvironments(const RDKit::ROMol&, RDKit::FingerprintArguments<OutputType>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, int, const RDKit::AdditionalOutput*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, bool) const [with OutputType = long long unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp:133:1:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp:138:39: warning: unused parameter 'atomInvariants' [-Wunused-parameter]
     const std::vector<std::uint32_t> *atomInvariants,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp:139:39: warning: unused parameter 'bondInvariants' [-Wunused-parameter]
     const std::vector<std::uint32_t> *bondInvariants,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp:140:16: warning: unused parameter 'hashResults' [-Wunused-parameter]
     const bool hashResults) const {
     ~~~~~~~~~~~^~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp: In instantiation of 'std::vector<RDKit::AtomEnvironment<OutputType>*> RDKit::AtomPair::AtomPairEnvGenerator<OutputType>::getEnvironments(const RDKit::ROMol&, RDKit::FingerprintArguments<OutputType>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, int, const RDKit::AdditionalOutput*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, bool) const [with OutputType = unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp:133:1:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp:138:39: warning: unused parameter 'atomInvariants' [-Wunused-parameter]
     const std::vector<std::uint32_t> *atomInvariants,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp:139:39: warning: unused parameter 'bondInvariants' [-Wunused-parameter]
     const std::vector<std::uint32_t> *bondInvariants,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp:140:16: warning: unused parameter 'hashResults' [-Wunused-parameter]
     const bool hashResults) const {
     ~~~~~~~~~~~^~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp: In instantiation of 'OutputType RDKit::AtomPair::AtomPairAtomEnv<OutputType>::getBitId(RDKit::FingerprintArguments<OutputType>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, const RDKit::AdditionalOutput*, bool) const [with OutputType = unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp:83:12:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp:86:39: warning: unused parameter 'bondInvariants' [-Wunused-parameter]
     const std::vector<std::uint32_t> *bondInvariants,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp: In instantiation of 'OutputType RDKit::AtomPair::AtomPairAtomEnv<OutputType>::getBitId(RDKit::FingerprintArguments<OutputType>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, const RDKit::AdditionalOutput*, bool) const [with OutputType = long long unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp:83:12:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp:86:39: warning: unused parameter 'bondInvariants' [-Wunused-parameter]
[ 44%] Linking CXX shared library ../../../lib/libRDKitFragCatalog.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/FragCatalog.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitFragCatalog.so.1 -o ../../../lib/libRDKitFragCatalog.so.1.2018.09.1 CMakeFiles/FragCatalog.dir/FragCatalogUtils.cpp.o CMakeFiles/FragCatalog.dir/FragCatGenerator.cpp.o CMakeFiles/FragCatalog.dir/FragCatalogEntry.cpp.o CMakeFiles/FragCatalog.dir/FragCatParams.cpp.o CMakeFiles/FragCatalog.dir/FragFPGenerator.cpp.o ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitFragCatalog.so.1.2018.09.1 ../../../lib/libRDKitFragCatalog.so.1 ../../../lib/libRDKitFragCatalog.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 44%] Built target FragCatalog
[ 44%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/MorganGenerator.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Fingerprints.dir/MorganGenerator.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp
[ 44%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureDef.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/c++  -DMolChemicalFeatures_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCHEMICALFEATURES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureDef.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.cpp
make -f Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/DependInfo.cmake --color=
Scanning dependencies of target rdShapeHelpers
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 44%] Building CXX object Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/rdShapeHelpers.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdShapeHelpers_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdShapeHelpers.dir/rdShapeHelpers.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers/Wrap/rdShapeHelpers.cpp
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp: In instantiation of 'RDKit::FingerprintGenerator<OutputType>* RDKit::MorganFingerprint::getMorganGenerator(unsigned int, bool, bool, bool, bool, RDKit::AtomInvariantsGenerator*, RDKit::BondInvariantsGenerator*, uint32_t, std::vector<unsigned int>, bool, bool) [with OutputType = unsigned int; uint32_t = unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:409:57:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:376:43: warning: unused parameter 'ownsBondInvGen' [-Wunused-parameter]
     const bool ownsAtomInvGen, const bool ownsBondInvGen) {
                                ~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp: In instantiation of 'RDKit::FingerprintGenerator<OutputType>* RDKit::MorganFingerprint::getMorganGenerator(unsigned int, bool, bool, bool, bool, RDKit::AtomInvariantsGenerator*, RDKit::BondInvariantsGenerator*, uint32_t, std::vector<unsigned int>, bool, bool) [with OutputType = long long unsigned int; uint32_t = unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:418:57:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:376:43: warning: unused parameter 'ownsBondInvGen' [-Wunused-parameter]
[ 44%] Linking CXX shared module ../../../../rdkit/Chem/rdPartialCharges.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdPartialCharges.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdPartialCharges.so CMakeFiles/rdPartialCharges.dir/rdPartialCharges.cpp.o ../../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization -lcoordgenlibs -lmaeparser ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 44%] Built target rdPartialCharges
[ 44%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/RDKitFPGenerator.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Fingerprints.dir/RDKitFPGenerator.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp: In instantiation of 'std::vector<RDKit::AtomEnvironment<OutputType>*> RDKit::MorganFingerprint::MorganEnvGenerator<OutputType>::getEnvironments(const RDKit::ROMol&, RDKit::FingerprintArguments<OutputType>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, int, const RDKit::AdditionalOutput*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, bool) const [with OutputType = long long unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:156:1:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:159:39: warning: unused parameter 'ignoreAtoms' [-Wunused-parameter]
     const std::vector<std::uint32_t> *ignoreAtoms, const int confId,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:159:62: warning: unused parameter 'confId' [-Wunused-parameter]
     const std::vector<std::uint32_t> *ignoreAtoms, const int confId,
                                                    ~~~~~~~~~~^~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:160:29: warning: unused parameter 'additionalOutput' [-Wunused-parameter]
     const AdditionalOutput *additionalOutput,
     ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:163:16: warning: unused parameter 'hashResults' [-Wunused-parameter]
     const bool hashResults) const {
     ~~~~~~~~~~~^~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp: In instantiation of 'std::vector<RDKit::AtomEnvironment<OutputType>*> RDKit::MorganFingerprint::MorganEnvGenerator<OutputType>::getEnvironments(const RDKit::ROMol&, RDKit::FingerprintArguments<OutputType>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, int, const RDKit::AdditionalOutput*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, bool) const [with OutputType = unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:156:1:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:159:39: warning: unused parameter 'ignoreAtoms' [-Wunused-parameter]
     const std::vector<std::uint32_t> *ignoreAtoms, const int confId,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:159:62: warning: unused parameter 'confId' [-Wunused-parameter]
     const std::vector<std::uint32_t> *ignoreAtoms, const int confId,
                                                    ~~~~~~~~~~^~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:160:29: warning: unused parameter 'additionalOutput' [-Wunused-parameter]
     const AdditionalOutput *additionalOutput,
     ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:163:16: warning: unused parameter 'hashResults' [-Wunused-parameter]
     const bool hashResults) const {
     ~~~~~~~~~~~^~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp: In instantiation of 'OutputType RDKit::MorganFingerprint::MorganAtomEnv<OutputType>::getBitId(RDKit::FingerprintArguments<OutputType>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, const RDKit::AdditionalOutput*, bool) const [with OutputType = unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:136:12:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:137:39: warning: unused parameter 'arguments' [-Wunused-parameter]
     FingerprintArguments<OutputType> *arguments,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:138:39: warning: unused parameter 'atomInvariants' [-Wunused-parameter]
     const std::vector<std::uint32_t> *atomInvariants,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:139:39: warning: unused parameter 'bondInvariants' [-Wunused-parameter]
     const std::vector<std::uint32_t> *bondInvariants,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:140:58: warning: unused parameter 'hashResults' [-Wunused-parameter]
     const AdditionalOutput *additionalOutput, const bool hashResults) const {
                                               ~~~~~~~~~~~^~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp: In instantiation of 'OutputType RDKit::MorganFingerprint::MorganAtomEnv<OutputType>::getBitId(RDKit::FingerprintArguments<OutputType>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, const RDKit::AdditionalOutput*, bool) const [with OutputType = long long unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:136:12:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:137:39: warning: unused parameter 'arguments' [-Wunused-parameter]
     FingerprintArguments<OutputType> *arguments,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:138:39: warning: unused parameter 'atomInvariants' [-Wunused-parameter]
     const std::vector<std::uint32_t> *atomInvariants,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:139:39: warning: unused parameter 'bondInvariants' [-Wunused-parameter]
     const std::vector<std::uint32_t> *bondInvariants,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:140:58: warning: unused parameter 'hashResults' [-Wunused-parameter]
     const AdditionalOutput *additionalOutput, const bool hashResults) const {
                                               ~~~~~~~~~~~^~~~~~~~~~~
[ 44%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/c++  -DMolChemicalFeatures_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCHEMICALFEATURES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureFactory.cpp
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp: In instantiation of 'std::vector<RDKit::AtomEnvironment<OutputType>*> RDKit::RDKitFP::RDKitFPEnvGenerator<OutputType>::getEnvironments(const RDKit::ROMol&, RDKit::FingerprintArguments<OutputType>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, int, const RDKit::AdditionalOutput*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, bool) const [with OutputType = long long unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:111:1:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:114:39: warning: unused parameter 'ignoreAtoms' [-Wunused-parameter]
     const std::vector<std::uint32_t> *ignoreAtoms, const int confId,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:114:62: warning: unused parameter 'confId' [-Wunused-parameter]
     const std::vector<std::uint32_t> *ignoreAtoms, const int confId,
                                                    ~~~~~~~~~~^~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:115:29: warning: unused parameter 'additionalOutput' [-Wunused-parameter]
     const AdditionalOutput *additionalOutput,
     ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:117:39: warning: unused parameter 'bondInvariants' [-Wunused-parameter]
     const std::vector<std::uint32_t> *bondInvariants,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:118:16: warning: unused parameter 'hashResults' [-Wunused-parameter]
     const bool hashResults) const {
     ~~~~~~~~~~~^~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp: In instantiation of 'std::vector<RDKit::AtomEnvironment<OutputType>*> RDKit::RDKitFP::RDKitFPEnvGenerator<OutputType>::getEnvironments(const RDKit::ROMol&, RDKit::FingerprintArguments<OutputType>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, int, const RDKit::AdditionalOutput*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, bool) const [with OutputType = unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:111:1:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:114:39: warning: unused parameter 'ignoreAtoms' [-Wunused-parameter]
     const std::vector<std::uint32_t> *ignoreAtoms, const int confId,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:114:62: warning: unused parameter 'confId' [-Wunused-parameter]
     const std::vector<std::uint32_t> *ignoreAtoms, const int confId,
                                                    ~~~~~~~~~~^~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:115:29: warning: unused parameter 'additionalOutput' [-Wunused-parameter]
     const AdditionalOutput *additionalOutput,
     ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:117:39: warning: unused parameter 'bondInvariants' [-Wunused-parameter]
     const std::vector<std::uint32_t> *bondInvariants,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:118:16: warning: unused parameter 'hashResults' [-Wunused-parameter]
     const bool hashResults) const {
     ~~~~~~~~~~~^~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp: In instantiation of 'OutputType RDKit::RDKitFP::RDKitFPAtomEnv<OutputType>::getBitId(RDKit::FingerprintArguments<OutputType>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, const RDKit::AdditionalOutput*, bool) const [with OutputType = unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:90:12:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:91:39: warning: unused parameter 'arguments' [-Wunused-parameter]
     FingerprintArguments<OutputType> *arguments,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:92:39: warning: unused parameter 'atomInvariants' [-Wunused-parameter]
     const std::vector<std::uint32_t> *atomInvariants,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:93:39: warning: unused parameter 'bondInvariants' [-Wunused-parameter]
     const std::vector<std::uint32_t> *bondInvariants,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:94:29: warning: unused parameter 'additionalOutput' [-Wunused-parameter]
     const AdditionalOutput *additionalOutput, const bool hashResults) const {
     ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:94:58: warning: unused parameter 'hashResults' [-Wunused-parameter]
     const AdditionalOutput *additionalOutput, const bool hashResults) const {
                                               ~~~~~~~~~~~^~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp: In instantiation of 'OutputType RDKit::RDKitFP::RDKitFPAtomEnv<OutputType>::getBitId(RDKit::FingerprintArguments<OutputType>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, const RDKit::AdditionalOutput*, bool) const [with OutputType = long long unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:90:12:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:91:39: warning: unused parameter 'arguments' [-Wunused-parameter]
     FingerprintArguments<OutputType> *arguments,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:92:39: warning: unused parameter 'atomInvariants' [-Wunused-parameter]
     const std::vector<std::uint32_t> *atomInvariants,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:93:39: warning: unused parameter 'bondInvariants' [-Wunused-parameter]
     const std::vector<std::uint32_t> *bondInvariants,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:94:29: warning: unused parameter 'additionalOutput' [-Wunused-parameter]
     const AdditionalOutput *additionalOutput, const bool hashResults) const {
     ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:94:58: warning: unused parameter 'hashResults' [-Wunused-parameter]
     const AdditionalOutput *additionalOutput, const bool hashResults) const {
                                               ~~~~~~~~~~~^~~~~~~~~~~
make -f Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ReducedGraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/DependInfo.cmake --color=
Scanning dependencies of target ReducedGraphs
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 44%] Building CXX object Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/ReducedGraphs.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_REDUCEDGRAPHS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DReducedGraphs_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ReducedGraphs.dir/ReducedGraphs.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ReducedGraphs/ReducedGraphs.cpp
[ 44%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/FeatureParser.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/c++  -DMolChemicalFeatures_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCHEMICALFEATURES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolChemicalFeatures.dir/FeatureParser.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/FeatureParser.cpp
[ 44%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/FingerprintUtil.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Fingerprints.dir/FingerprintUtil.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintUtil.cpp
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Conformer.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:36,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers/Wrap/rdShapeHelpers.cpp:13:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h: In function 'boost::python::tuple RDKit::getUnionOfTwoBox(boost::python::tuple, boost::python::tuple)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:56:31: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
       : Point(other), x(other.x), y(other.y), z(other.z) {}
                         ~~~~~~^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:56:43: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::y' may be used uninitialized in this function [-Wmaybe-uninitialized]
       : Point(other), x(other.x), y(other.y), z(other.z) {}
                                     ~~~~~~^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:56:55: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::z' may be used uninitialized in this function [-Wmaybe-uninitialized]
       : Point(other), x(other.x), y(other.y), z(other.z) {}
                                                 ~~~~~~^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:56:31: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
       : Point(other), x(other.x), y(other.y), z(other.z) {}
                         ~~~~~~^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:56:43: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::y' may be used uninitialized in this function [-Wmaybe-uninitialized]
       : Point(other), x(other.x), y(other.y), z(other.z) {}
                                     ~~~~~~^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:56:55: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::z' may be used uninitialized in this function [-Wmaybe-uninitialized]
       : Point(other), x(other.x), y(other.y), z(other.z) {}
                                                 ~~~~~~^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:56:31: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
       : Point(other), x(other.x), y(other.y), z(other.z) {}
                         ~~~~~~^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:56:43: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::y' may be used uninitialized in this function [-Wmaybe-uninitialized]
       : Point(other), x(other.x), y(other.y), z(other.z) {}
                                     ~~~~~~^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:56:55: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::z' may be used uninitialized in this function [-Wmaybe-uninitialized]
       : Point(other), x(other.x), y(other.y), z(other.z) {}
                                                 ~~~~~~^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:56:31: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
       : Point(other), x(other.x), y(other.y), z(other.z) {}
                         ~~~~~~^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:56:43: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::y' may be used uninitialized in this function [-Wmaybe-uninitialized]
       : Point(other), x(other.x), y(other.y), z(other.z) {}
                                     ~~~~~~^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:56:55: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::z' may be used uninitialized in this function [-Wmaybe-uninitialized]
       : Point(other), x(other.x), y(other.y), z(other.z) {}
                                                 ~~~~~~^
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ReducedGraphs/ReducedGraphs.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
[ 44%] Linking CXX shared module ../../../../rdkit/Chem/rdShapeHelpers.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdShapeHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdShapeHelpers.so CMakeFiles/rdShapeHelpers.dir/rdShapeHelpers.cpp.o ../../../../lib/libRDKitShapeHelpers.so.1.2018.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 44%] Built target rdShapeHelpers
[ 44%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/TopologicalTorsionGenerator.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Fingerprints.dir/TopologicalTorsionGenerator.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp
/usr/include/c++/8/bits/vector.tcc: In function 'RDKit::ROMol* RDKit::ReducedGraphs::generateMolExtendedReducedGraph(const RDKit::ROMol&, std::vector<boost::dynamic_bitset<> >*)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/FeatureParser.h:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/FeatureParser.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
[ 44%] Linking CXX shared library ../../../lib/libRDKitReducedGraphs.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs && /usr/bin/cmake -E cmake_link_script CMakeFiles/ReducedGraphs.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitReducedGraphs.so.1 -o ../../../lib/libRDKitReducedGraphs.so.1.2018.09.1 CMakeFiles/ReducedGraphs.dir/ReducedGraphs.cpp.o ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitReducedGraphs.so.1.2018.09.1 ../../../lib/libRDKitReducedGraphs.so.1 ../../../lib/libRDKitReducedGraphs.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 44%] Built target ReducedGraphs
make -f Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/build.make Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolInterchange/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMolInterchange
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/build.make Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 44%] Building CXX object Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/rdMolInterchange.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolInterchange_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/rapidjson -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMolInterchange.dir/rdMolInterchange.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolInterchange/Wrap/rdMolInterchange.cpp
/usr/include/c++/8/bits/vector.tcc: In function 'RDKit::MolChemicalFeatureDef* RDKit::Local::parseFeatureDef(std::istream&, const string&, unsigned int&, const std::map<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char> >&)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/FeatureParser.h:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/FeatureParser.cpp:11:
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
    _M_range_insert(__pos, __first, __last,
    ^~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp:11:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp: In instantiation of 'RDKit::TopologicalTorsion::TopologicalTorsionArguments<OutputType>::TopologicalTorsionArguments(bool, uint32_t, bool, std::vector<unsigned int>, uint32_t) [with OutputType = long long unsigned int; uint32_t = unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp:161:7:   required from 'RDKit::FingerprintGenerator<OutputType>* RDKit::TopologicalTorsion::getTopologicalTorsionGenerator(bool, uint32_t, RDKit::AtomInvariantsGenerator*, bool, std::vector<unsigned int>, uint32_t, bool) [with OutputType = long long unsigned int; uint32_t = unsigned int]'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp:183:58:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:26:18: warning: 'RDKit::TopologicalTorsion::TopologicalTorsionArguments<long long unsigned int>::d_torsionAtomCount' will be initialized after [-Wreorder]
   const uint32_t d_torsionAtomCount;
                  ^~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp:27:76: warning:   base 'RDKit::FingerprintArguments<long long unsigned int>' [-Wreorder]
       FingerprintArguments<OutputType>(countSimulation, countBounds, fpSize){};
                                                                            ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp:21:1: warning:   when initialized here [-Wreorder]
 TopologicalTorsionArguments<OutputType>::TopologicalTorsionArguments(
 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make -f Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/DependInfo.cmake --color=
Scanning dependencies of target testSLNParse
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 44%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/test.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SLNPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testSLNParse.dir/test.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse/test.cpp
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp: In instantiation of 'std::vector<RDKit::AtomEnvironment<OutputType>*> RDKit::TopologicalTorsion::TopologicalTorsionEnvGenerator<OutputType>::getEnvironments(const RDKit::ROMol&, RDKit::FingerprintArguments<OutputType>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, int, const RDKit::AdditionalOutput*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, bool) const [with OutputType = long long unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp:58:1:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp:61:62: warning: unused parameter 'confId' [-Wunused-parameter]
     const std::vector<std::uint32_t> *ignoreAtoms, const int confId,
                                                    ~~~~~~~~~~^~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp:62:29: warning: unused parameter 'additionalOutput' [-Wunused-parameter]
     const AdditionalOutput *additionalOutput,
     ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp:64:39: warning: unused parameter 'bondInvariants' [-Wunused-parameter]
     const std::vector<std::uint32_t> *bondInvariants,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp: In instantiation of 'OutputType RDKit::TopologicalTorsion::TopologicalTorsionAtomEnv<OutputType>::getBitId(RDKit::FingerprintArguments<OutputType>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, const RDKit::AdditionalOutput*, bool) const [with OutputType = long long unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp:43:12:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp:44:39: warning: unused parameter 'arguments' [-Wunused-parameter]
     FingerprintArguments<OutputType> *arguments,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp:45:39: warning: unused parameter 'atomInvariants' [-Wunused-parameter]
     const std::vector<std::uint32_t> *atomInvariants,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp:46:39: warning: unused parameter 'bondInvariants' [-Wunused-parameter]
     const std::vector<std::uint32_t> *bondInvariants,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp:47:29: warning: unused parameter 'additionalOutput' [-Wunused-parameter]
     const AdditionalOutput *additionalOutput, const bool hashResults) const {
     ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp:47:58: warning: unused parameter 'hashResults' [-Wunused-parameter]
     const AdditionalOutput *additionalOutput, const bool hashResults) const {
                                               ~~~~~~~~~~~^~~~~~~~~~~
[ 45%] Linking CXX shared library ../../../lib/libRDKitMolChemicalFeatures.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolChemicalFeatures.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitMolChemicalFeatures.so.1 -o ../../../lib/libRDKitMolChemicalFeatures.so.1.2018.09.1 CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeature.cpp.o CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureDef.cpp.o CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o CMakeFiles/MolChemicalFeatures.dir/FeatureParser.cpp.o ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
[ 45%] Linking CXX shared library ../../../lib/libRDKitFingerprints.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_link_script CMakeFiles/Fingerprints.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitFingerprints.so.1 -o ../../../lib/libRDKitFingerprints.so.1.2018.09.1 CMakeFiles/Fingerprints.dir/Fingerprints.cpp.o CMakeFiles/Fingerprints.dir/PatternFingerprints.cpp.o CMakeFiles/Fingerprints.dir/MorganFingerprints.cpp.o CMakeFiles/Fingerprints.dir/AtomPairs.cpp.o CMakeFiles/Fingerprints.dir/MACCS.cpp.o CMakeFiles/Fingerprints.dir/FingerprintGenerator.cpp.o CMakeFiles/Fingerprints.dir/AtomPairGenerator.cpp.o CMakeFiles/Fingerprints.dir/MorganGenerator.cpp.o CMakeFiles/Fingerprints.dir/RDKitFPGenerator.cpp.o CMakeFiles/Fingerprints.dir/FingerprintUtil.cpp.o CMakeFiles/Fingerprints.dir/TopologicalTorsionGenerator.cpp.o ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolChemicalFeatures.so.1.2018.09.1 ../../../lib/libRDKitMolChemicalFeatures.so.1 ../../../lib/libRDKitMolChemicalFeatures.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 45%] Built target MolChemicalFeatures
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make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/DependInfo.cmake --color=
Scanning dependencies of target rdSLNParse
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
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make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 45%] Building CXX object Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/rdSLNParse.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSLNParse_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdSLNParse.dir/rdSLNParse.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse/Wrap/rdSLNParse.cpp
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1 ../../../lib/libRDKitFingerprints.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 45%] Built target Fingerprints
make -f Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/DependInfo.cmake --color=
Scanning dependencies of target rdchem
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[ 46%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/rdchem.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdchem.dir/rdchem.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/rdchem.cpp
[ 46%] Linking CXX shared module ../../../../rdkit/Chem/rdMolInterchange.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolInterchange.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdMolInterchange.so CMakeFiles/rdMolInterchange.dir/rdMolInterchange.cpp.o ../../../../lib/libRDKitMolInterchange.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
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[ 46%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Table.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdchem.dir/Table.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/Table.cpp
[ 47%] Linking CXX shared module ../../../../rdkit/Chem/rdSLNParse.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdSLNParse.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdSLNParse.so CMakeFiles/rdSLNParse.dir/rdSLNParse.cpp.o ../../../../lib/libRDKitSLNParse.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization -lcoordgenlibs -lmaeparser ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
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[ 47%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Atom.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdchem.dir/Atom.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/Atom.cpp
[ 47%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Bond.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdchem.dir/Bond.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/Bond.cpp
[ 47%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Mol.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdchem.dir/Mol.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/Mol.cpp
[ 48%] Linking CXX executable testSLNParse
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSLNParse.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testSLNParse.dir/test.cpp.o  -o testSLNParse ../../../lib/libRDKitSLNParse.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lcoordgenlibs -lmaeparser -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 48%] Built target testSLNParse
make -f Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Optimizer /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/DependInfo.cmake --color=
Scanning dependencies of target testOptimizer
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 48%] Building CXX object Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/testOptimizer.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_OPTIMIZER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testOptimizer.dir/testOptimizer.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Optimizer/testOptimizer.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/Atom.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:16,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory/Snapshot.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Optimizer/BFGSOpt.h:13,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Optimizer/testOptimizer.cpp:16:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDKit::Snapshot&}; _Tp = RDKit::Snapshot; _Alloc = std::allocator<RDKit::Snapshot>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Snapshot>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:16,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory/Snapshot.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Optimizer/BFGSOpt.h:13,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Optimizer/testOptimizer.cpp:16:
/usr/include/c++/8/bits/stl_vector.h: In function 'int BFGSOpt::minimize(unsigned int, double*, double, unsigned int&, double&, EnergyFunctor, GradientFunctor, unsigned int, RDKit::SnapshotVect*, double, unsigned int) [with EnergyFunctor = double (*)(double*); GradientFunctor = double (*)(double*, double*)]':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
[ 48%] Linking CXX executable testOptimizer
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer && /usr/bin/cmake -E cmake_link_script CMakeFiles/testOptimizer.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testOptimizer.dir/testOptimizer.cpp.o  -o testOptimizer ../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 48%] Built target testOptimizer
make -f Code/ForceField/CMakeFiles/ForceField.dir/build.make Code/ForceField/CMakeFiles/ForceField.dir/depend
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/Bond.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/CMakeFiles/ForceField.dir/DependInfo.cmake --color=
Scanning dependencies of target ForceField
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ForceField/CMakeFiles/ForceField.dir/build.make Code/ForceField/CMakeFiles/ForceField.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 49%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/ForceField.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/ForceField.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/ForceField.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/Mol.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 49%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/AngleBend.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/UFF/AngleBend.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/AngleBend.cpp
[ 49%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/BondStretch.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/UFF/BondStretch.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/BondStretch.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/ForceField.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/ForceField.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDKit::Snapshot&}; _Tp = RDKit::Snapshot; _Alloc = std::allocator<RDKit::Snapshot>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Snapshot>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >'} changed in GCC 7.1
[ 49%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/Nonbonded.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/UFF/Nonbonded.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/Nonbonded.cpp
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/ForceField.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/ForceField.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In function 'int BFGSOpt::minimize(unsigned int, double*, double, unsigned int&, double&, EnergyFunctor, GradientFunctor, unsigned int, RDKit::SnapshotVect*, double, unsigned int) [with EnergyFunctor = ForceFieldsHelper::calcEnergy; GradientFunctor = ForceFieldsHelper::calcGradient]':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In member function 'double ForceFields::ForceField::calcEnergy(std::vector<double>*) const':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
make -f Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/DependInfo.cmake --color=
Scanning dependencies of target FileParsers
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 49%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/Mol2FileParser.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/Mol2FileParser.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/Mol2FileParser.cpp
make -f Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build.make Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/DependInfo.cmake --color=
Scanning dependencies of target rdFingerprintGenerator
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build.make Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 49%] Building CXX object Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/FingerprintGeneratorWrapper.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdFingerprintGenerator_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdFingerprintGenerator.dir/FingerprintGeneratorWrapper.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Wrap/FingerprintGeneratorWrapper.cpp
[ 49%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/Inversion.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/UFF/Inversion.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/Inversion.cpp
[ 49%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Conformer.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdchem.dir/Conformer.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/Conformer.cpp
[ 49%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/TorsionAngle.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/UFF/TorsionAngle.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/TorsionAngle.cpp
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Wrap/FingerprintGeneratorWrapper.cpp: In function 'const std::vector<const RDKit::ROMol*> RDKit::FingerprintWrapper::convertPyArgumentsForBulk(const boost::python::list&)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Wrap/FingerprintGeneratorWrapper.cpp:190:25: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
       for (int i = 0; i < len; i++) {
                       ~~^~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/Mol2FileParser.cpp:37:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/Mol2FileParser.cpp:37:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/Mol2FileParser.cpp:37:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDGeom::Point3D&}; _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Wrap/FingerprintGeneratorWrapper.cpp:17:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Wrap/MorganWrapper.cpp: In instantiation of 'RDKit::FingerprintGenerator<OutputType>* RDKit::MorganWrapper::getMorganGenerator(unsigned int, bool, bool, bool, bool, bool, boost::python::api::object&, uint32_t, boost::python::api::object&, boost::python::api::object&) [with OutputType = long long unsigned int; uint32_t = unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Wrap/MorganWrapper.cpp:121:63:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Wrap/MorganWrapper.cpp:24:50: warning: unused parameter 'includeRingMembership' [-Wunused-parameter]
     const bool onlyNonzeroInvariants, const bool includeRingMembership,
                                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Wrap/FingerprintGeneratorWrapper.cpp:18:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Wrap/RDKitFPWrapper.cpp: In instantiation of 'RDKit::FingerprintGenerator<OutputType>* RDKit::RDKitFPWrapper::getRDKitFPGenerator(unsigned int, unsigned int, bool, bool, bool, bool, boost::python::api::object&, uint32_t, boost::python::api::object&) [with OutputType = long long unsigned int; uint32_t = unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Wrap/RDKitFPWrapper.cpp:92:63:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Wrap/RDKitFPWrapper.cpp:27:28: warning: unused variable 'bondInvariantsGenerator' [-Wunused-variable]
   BondInvariantsGenerator *bondInvariantsGenerator = nullptr;
                            ^~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Wrap/FingerprintGeneratorWrapper.cpp:19:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Wrap/TopologicalTorsionWrapper.cpp: In instantiation of 'RDKit::FingerprintGenerator<OutputType>* RDKit::TopologicalTorsionWrapper::getTopologicalTorsionFPGenerator(bool, uint32_t, bool, boost::python::api::object&, uint32_t, boost::python::api::object&) [with OutputType = long long unsigned int; uint32_t = unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Wrap/TopologicalTorsionWrapper.cpp:75:63:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Wrap/TopologicalTorsionWrapper.cpp:26:28: warning: unused variable 'bondInvariantsGenerator' [-Wunused-variable]
   BondInvariantsGenerator *bondInvariantsGenerator = nullptr;
                            ^~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/Mol2FileParser.cpp:37:
/usr/include/c++/8/bits/stl_vector.h: In function 'RDKit::RWMol* RDKit::Mol2DataStreamToMol(std::istream*, bool, bool, RDKit::Mol2Type, bool)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 49%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolFileParser.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/MolFileParser.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolFileParser.cpp
[ 50%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/DistanceConstraint.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/UFF/DistanceConstraint.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/DistanceConstraint.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/Conformer.cpp:13:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/Conformer.cpp:13:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/Conformer.cpp:20:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h: In member function 'T PySequenceHolder<T>::operator[](unsigned int) const [with T = double]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       T res = python::extract<T>(d_seq[which]);
         ^~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/Conformer.cpp:13:
/usr/include/c++/8/bits/stl_vector.h: In function 'void RDKit::SetAtomPos(RDKit::Conformer*, unsigned int, boost::python::api::object)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 51%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/RingInfo.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdchem.dir/RingInfo.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/RingInfo.cpp
[ 51%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/AngleConstraint.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/UFF/AngleConstraint.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/AngleConstraint.cpp
[ 51%] Linking CXX shared module ../../../../rdkit/Chem/rdFingerprintGenerator.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdFingerprintGenerator.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdFingerprintGenerator.so CMakeFiles/rdFingerprintGenerator.dir/FingerprintGeneratorWrapper.cpp.o ../../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
[ 51%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/TorsionConstraint.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/UFF/TorsionConstraint.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/TorsionConstraint.cpp
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 51%] Built target rdFingerprintGenerator
[ 51%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/EditableMol.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdchem.dir/EditableMol.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/EditableMol.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolFileParser.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolFileParser.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolFileParser.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
make -f Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMolChemicalFeatures
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 51%] Building CXX object Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/rdMolChemicalFeatures.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolChemicalFeatures_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMolChemicalFeatures.dir/rdMolChemicalFeatures.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/Wrap/rdMolChemicalFeatures.cpp
[ 51%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/PositionConstraint.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/UFF/PositionConstraint.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/PositionConstraint.cpp
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolFileParser.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In function 'bool RDKit::FileParserUtils::ParseV2000CTAB(std::istream*, unsigned int&, RDKit::RWMol*, RDKit::Conformer*&, bool&, unsigned int&, unsigned int&, bool)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 51%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/Params.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/UFF/Params.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/Params.cpp
[ 51%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/MonomerInfo.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdchem.dir/MonomerInfo.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/MonomerInfo.cpp
[ 51%] Building CXX object Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeature.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolChemicalFeatures_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeature.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/Wrap/MolChemicalFeature.cpp
/usr/include/c++/8/bits/stl_vector.h: In function 'void RDKit::{anonymous}::ParseV3000AtomBlock(std::istream*, unsigned int&, unsigned int, RDKit::RWMol*, RDKit::Conformer*)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 51%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/AngleBend.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/MMFF/AngleBend.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/AngleBend.cpp
[ 51%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/BondStretch.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/MMFF/BondStretch.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/BondStretch.cpp
[ 51%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolFileStereochem.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/MolFileStereochem.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolFileStereochem.cpp
[ 51%] Building CXX object Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolChemicalFeatures_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/Wrap/MolChemicalFeatureFactory.cpp
[ 51%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/ResonanceMolSupplier.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdchem.dir/ResonanceMolSupplier.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/ResonanceMolSupplier.cpp
[ 52%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/StretchBend.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/MMFF/StretchBend.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/StretchBend.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolFileStereochem.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolFileStereochem.cpp:13:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'void RDKit::ClearSingleBondDirFlags(RDKit::ROMol&)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 52%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolFileWriter.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/MolFileWriter.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolFileWriter.cpp
[ 52%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/OopBend.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/MMFF/OopBend.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/OopBend.cpp
[ 52%] Building CXX object Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/ChemicalFeatureUtils.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolChemicalFeatures_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMolChemicalFeatures.dir/ChemicalFeatureUtils.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/Wrap/ChemicalFeatureUtils.cpp
[ 52%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/TorsionAngle.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/MMFF/TorsionAngle.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/TorsionAngle.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolFileWriter.cpp:13:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<unsigned int, RDGeom::Point3D>}; _Tp = std::pair<unsigned int, RDGeom::Point3D>; _Alloc = std::allocator<std::pair<unsigned int, RDGeom::Point3D> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::pair<unsigned int, RDGeom::Point3D> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
[ 52%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/MolBundle.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdchem.dir/MolBundle.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/MolBundle.cpp
In file included from /usr/include/c++/8/algorithm:62,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDLog.h:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Invariant.h:22,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolFileWriter.cpp:13:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<Rankers::pairLess<unsigned int, RDGeom::Point3D> >]':
/usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
     __unguarded_linear_insert(_RandomAccessIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairLess<unsigned int, RDGeom::Point3D> >]':
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
     __insertion_sort(_RandomAccessIterator __first,
     ^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
In file included from /usr/include/c++/8/bits/char_traits.h:39,
                 from /usr/include/c++/8/string:40,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Invariant.h:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolFileWriter.cpp:13:
/usr/include/c++/8/bits/stl_algobase.h: In function 'void std::iter_swap(_ForwardIterator1, _ForwardIterator2) [with _ForwardIterator1 = __gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >; _ForwardIterator2 = __gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >]':
/usr/include/c++/8/bits/stl_algobase.h:120:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
     iter_swap(_ForwardIterator1 __a, _ForwardIterator2 __b)
     ^~~~~~~~~
/usr/include/c++/8/bits/stl_algobase.h:120:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algobase.h:120:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
In file included from /usr/include/c++/8/bits/stl_algo.h:61,
                 from /usr/include/c++/8/algorithm:62,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDLog.h:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Invariant.h:22,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolFileWriter.cpp:13:
/usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >; _Distance = int; _Tp = std::pair<unsigned int, RDGeom::Point3D>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairLess<unsigned int, RDGeom::Point3D> >]':
/usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
     ^~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDLog.h:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Invariant.h:22,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolFileWriter.cpp:13:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairLess<unsigned int, RDGeom::Point3D> >]':
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
     __introsort_loop(_RandomAccessIterator __first,
     ^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:84:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
      std::iter_swap(__result, __b);
      ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:86:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
      std::iter_swap(__result, __c);
      ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:88:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
      std::iter_swap(__result, __a);
      ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolFileWriter.cpp:13:
/usr/include/c++/8/bits/vector.tcc: In function 'void RDKit::GetMolFileAtomProperties(const RDKit::Atom*, const RDKit::Conformer*, int&, int&, unsigned int&, double&, double&, double&)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDLog.h:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Invariant.h:22,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolFileWriter.cpp:13:
/usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
    std::__introsort_loop(__first, __last,
    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
     std::__lg(__last - __first) * 2,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     __comp);
     ~~~~~~~              
/usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
  std::__insertion_sort(__first, __last, __comp);
  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 52%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/Nonbonded.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/MMFF/Nonbonded.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Nonbonded.cpp
[ 53%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/ForwardSDMolSupplier.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/ForwardSDMolSupplier.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/ForwardSDMolSupplier.cpp
[ 54%] Linking CXX shared module ../../../../rdkit/Chem/rdMolChemicalFeatures.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolChemicalFeatures.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdMolChemicalFeatures.so CMakeFiles/rdMolChemicalFeatures.dir/rdMolChemicalFeatures.cpp.o CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeature.cpp.o CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o CMakeFiles/rdMolChemicalFeatures.dir/ChemicalFeatureUtils.cpp.o ../../../../lib/libRDKitMolChemicalFeatures.so.1.2018.09.1 ../../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 54%] Built target rdMolChemicalFeatures
make -f Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ReducedGraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/DependInfo.cmake --color=
Scanning dependencies of target testReducedGraphs
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 54%] Building CXX object Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/test1.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_REDUCEDGRAPHS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testReducedGraphs.dir/test1.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ReducedGraphs/test1.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/BadFileException.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/ForwardSDMolSupplier.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
[ 54%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/DistanceConstraint.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/MMFF/DistanceConstraint.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/DistanceConstraint.cpp
/usr/include/c++/8/bits/vector.tcc: In member function 'virtual void RDKit::ForwardSDMolSupplier::readMolProps(RDKit::ROMol*)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 54%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SDMolSupplier.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/SDMolSupplier.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SDMolSupplier.cpp
[ 54%] Linking CXX executable testReducedGraphs
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs && /usr/bin/cmake -E cmake_link_script CMakeFiles/testReducedGraphs.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testReducedGraphs.dir/test1.cpp.o  -o testReducedGraphs ../../../lib/libRDKitReducedGraphs.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lcoordgenlibs -lmaeparser -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 54%] Built target testReducedGraphs
make -f Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ReducedGraphs/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/DependInfo.cmake --color=
Scanning dependencies of target rdReducedGraphs
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 54%] Building CXX object Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/rdReducedGraphs.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdReducedGraphs_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdReducedGraphs.dir/rdReducedGraphs.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ReducedGraphs/Wrap/rdReducedGraphs.cpp
[ 54%] Linking CXX shared module ../../../rdkit/Chem/rdchem.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdchem.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../rdkit/Chem/rdchem.so CMakeFiles/rdchem.dir/rdchem.cpp.o CMakeFiles/rdchem.dir/Table.cpp.o CMakeFiles/rdchem.dir/Atom.cpp.o CMakeFiles/rdchem.dir/Bond.cpp.o CMakeFiles/rdchem.dir/Mol.cpp.o CMakeFiles/rdchem.dir/Conformer.cpp.o CMakeFiles/rdchem.dir/RingInfo.cpp.o CMakeFiles/rdchem.dir/EditableMol.cpp.o CMakeFiles/rdchem.dir/MonomerInfo.cpp.o CMakeFiles/rdchem.dir/ResonanceMolSupplier.cpp.o CMakeFiles/rdchem.dir/MolBundle.cpp.o ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 54%] Built target rdchem
make -f Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SubstructLibrary /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/DependInfo.cmake --color=
Scanning dependencies of target SubstructLibrary
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 54%] Building CXX object Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/SubstructLibrary.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBSTRUCTLIBRARY_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubstructLibrary_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SubstructLibrary.dir/SubstructLibrary.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SubstructLibrary/SubstructLibrary.cpp
[ 54%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/AngleConstraint.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/MMFF/AngleConstraint.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/AngleConstraint.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/BadFileException.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SDMolSupplier.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::fpos<__mbstate_t>&}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/BadFileException.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SDMolSupplier.cpp:12:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void RDKit::SDMolSupplier::moveTo(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In member function 'virtual RDKit::ROMol* RDKit::SDMolSupplier::next()':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In member function 'unsigned int RDKit::SDMolSupplier::length()':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
[ 54%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SDWriter.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/SDWriter.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SDWriter.cpp
[ 55%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/TorsionConstraint.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/MMFF/TorsionConstraint.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/TorsionConstraint.cpp
[ 55%] Linking CXX shared module ../../../../rdkit/Chem/rdReducedGraphs.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdReducedGraphs.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdReducedGraphs.so CMakeFiles/rdReducedGraphs.dir/rdReducedGraphs.cpp.o ../../../../lib/libRDKitReducedGraphs.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 55%] Built target rdReducedGraphs
[ 55%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/PositionConstraint.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/MMFF/PositionConstraint.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/PositionConstraint.cpp
[ 56%] Linking CXX shared library ../../../lib/libRDKitSubstructLibrary.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary && /usr/bin/cmake -E cmake_link_script CMakeFiles/SubstructLibrary.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitSubstructLibrary.so.1 -o ../../../lib/libRDKitSubstructLibrary.so.1.2018.09.1 CMakeFiles/SubstructLibrary.dir/SubstructLibrary.cpp.o ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitSubstructLibrary.so.1.2018.09.1 ../../../lib/libRDKitSubstructLibrary.so.1 ../../../lib/libRDKitSubstructLibrary.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 56%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SmilesMolSupplier.cpp.o
[ 56%] Built target SubstructLibrary
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/SmilesMolSupplier.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SmilesMolSupplier.cpp
[ 56%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/Params.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/MMFF/Params.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Params.cpp
[ 56%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SmilesWriter.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/SmilesWriter.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SmilesWriter.cpp
[ 56%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TDTMolSupplier.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/TDTMolSupplier.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/TDTMolSupplier.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Params.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Params.cpp:17:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFPBCI&}; _Tp = ForceFields::MMFF::MMFFPBCI; _Alloc = std::allocator<ForceFields::MMFF::MMFFPBCI>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFPBCI>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFPBCI*, std::vector<ForceFields::MMFF::MMFFPBCI> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFChg&}; _Tp = ForceFields::MMFF::MMFFChg; _Alloc = std::allocator<ForceFields::MMFF::MMFFChg>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFChg>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFChg*, std::vector<ForceFields::MMFF::MMFFChg> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFBond&}; _Tp = ForceFields::MMFF::MMFFBond; _Alloc = std::allocator<ForceFields::MMFF::MMFFBond>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFBond>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFBond*, std::vector<ForceFields::MMFF::MMFFBond> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFHerschbachLaurie&}; _Tp = ForceFields::MMFF::MMFFHerschbachLaurie; _Alloc = std::allocator<ForceFields::MMFF::MMFFHerschbachLaurie>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFHerschbachLaurie>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFHerschbachLaurie*, std::vector<ForceFields::MMFF::MMFFHerschbachLaurie> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFCovRadPauEle&}; _Tp = ForceFields::MMFF::MMFFCovRadPauEle; _Alloc = std::allocator<ForceFields::MMFF::MMFFCovRadPauEle>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFCovRadPauEle>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFCovRadPauEle*, std::vector<ForceFields::MMFF::MMFFCovRadPauEle> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFAngle&}; _Tp = ForceFields::MMFF::MMFFAngle; _Alloc = std::allocator<ForceFields::MMFF::MMFFAngle>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFAngle>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFAngle*, std::vector<ForceFields::MMFF::MMFFAngle> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFStbn&}; _Tp = ForceFields::MMFF::MMFFStbn; _Alloc = std::allocator<ForceFields::MMFF::MMFFStbn>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFStbn>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFStbn*, std::vector<ForceFields::MMFF::MMFFStbn> >'} changed in GCC 7.1
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/BadFileException.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SmilesMolSupplier.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFOop&}; _Tp = ForceFields::MMFF::MMFFOop; _Alloc = std::allocator<ForceFields::MMFF::MMFFOop>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFOop>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFOop*, std::vector<ForceFields::MMFF::MMFFOop> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFTor&}; _Tp = ForceFields::MMFF::MMFFTor; _Alloc = std::allocator<ForceFields::MMFF::MMFFTor>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFTor>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFTor*, std::vector<ForceFields::MMFF::MMFFTor> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFVdW&}; _Tp = ForceFields::MMFF::MMFFVdW; _Alloc = std::allocator<ForceFields::MMFF::MMFFVdW>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFVdW>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFVdW*, std::vector<ForceFields::MMFF::MMFFVdW> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Params.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Params.cpp:17:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFPBCICollection::MMFFPBCICollection(std::__cxx11::string)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFPBCI*, std::vector<ForceFields::MMFF::MMFFPBCI> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFCovRadPauEleCollection::MMFFCovRadPauEleCollection(std::__cxx11::string)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFCovRadPauEle*, std::vector<ForceFields::MMFF::MMFFCovRadPauEle> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFBndkCollection::MMFFBndkCollection(std::__cxx11::string)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFBond*, std::vector<ForceFields::MMFF::MMFFBond> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFChgCollection::MMFFChgCollection(std::__cxx11::string)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFChg*, std::vector<ForceFields::MMFF::MMFFChg> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFHerschbachLaurieCollection::MMFFHerschbachLaurieCollection(std::__cxx11::string)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFHerschbachLaurie*, std::vector<ForceFields::MMFF::MMFFHerschbachLaurie> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFBondCollection::MMFFBondCollection(std::__cxx11::string)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFBond*, std::vector<ForceFields::MMFF::MMFFBond> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFOopCollection::MMFFOopCollection(bool, std::__cxx11::string)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFOop*, std::vector<ForceFields::MMFF::MMFFOop> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFStbnCollection::MMFFStbnCollection(std::__cxx11::string)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFStbn*, std::vector<ForceFields::MMFF::MMFFStbn> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFAngleCollection::MMFFAngleCollection(std::__cxx11::string)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFAngle*, std::vector<ForceFields::MMFF::MMFFAngle> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
[ 57%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TDTWriter.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/TDTWriter.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/TDTWriter.cpp
/usr/include/c++/8/bits/vector.tcc: In member function 'RDKit::ROMol* RDKit::SmilesMolSupplier::processLine(std::__cxx11::string)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFTorCollection::MMFFTorCollection(bool, std::__cxx11::string)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFTor*, std::vector<ForceFields::MMFF::MMFFTor> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFVdWCollection::MMFFVdWCollection(std::__cxx11::string)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFVdW*, std::vector<ForceFields::MMFF::MMFFVdW> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/token_functions.hpp:34,
                 from /usr/include/boost/token_iterator.hpp:24,
                 from /usr/include/boost/tokenizer.hpp:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/TDTMolSupplier.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/token_functions.hpp:34,
                 from /usr/include/boost/token_iterator.hpp:24,
                 from /usr/include/boost/tokenizer.hpp:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/TDTMolSupplier.cpp:12:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/token_functions.hpp:34,
                 from /usr/include/boost/token_iterator.hpp:24,
                 from /usr/include/boost/tokenizer.hpp:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/TDTMolSupplier.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
[ 57%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TplFileParser.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/TplFileParser.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/TplFileParser.cpp
[ 57%] Linking CXX shared library ../../lib/libRDKitForceField.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/cmake -E cmake_link_script CMakeFiles/ForceField.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitForceField.so.1 -o ../../lib/libRDKitForceField.so.1.2018.09.1 CMakeFiles/ForceField.dir/ForceField.cpp.o CMakeFiles/ForceField.dir/UFF/AngleBend.cpp.o CMakeFiles/ForceField.dir/UFF/BondStretch.cpp.o CMakeFiles/ForceField.dir/UFF/Nonbonded.cpp.o CMakeFiles/ForceField.dir/UFF/Inversion.cpp.o CMakeFiles/ForceField.dir/UFF/TorsionAngle.cpp.o CMakeFiles/ForceField.dir/UFF/DistanceConstraint.cpp.o CMakeFiles/ForceField.dir/UFF/AngleConstraint.cpp.o CMakeFiles/ForceField.dir/UFF/TorsionConstraint.cpp.o CMakeFiles/ForceField.dir/UFF/PositionConstraint.cpp.o CMakeFiles/ForceField.dir/UFF/Params.cpp.o CMakeFiles/ForceField.dir/MMFF/AngleBend.cpp.o CMakeFiles/ForceField.dir/MMFF/BondStretch.cpp.o CMakeFiles/ForceField.dir/MMFF/StretchBend.cpp.o CMakeFiles/ForceField.dir/MMFF/OopBend.cpp.o CMakeFiles/ForceField.dir/MMFF/TorsionAngle.cpp.o CMakeFiles/ForceField.dir/MMFF/Nonbonded.cpp.o CMakeFiles/ForceField.dir/MMFF/DistanceConstraint.cpp.o CMakeFiles/ForceField.dir/MMFF/AngleConstraint.cpp.o CMakeFiles/ForceField.dir/MMFF/TorsionConstraint.cpp.o CMakeFiles/ForceField.dir/MMFF/PositionConstraint.cpp.o CMakeFiles/ForceField.dir/MMFF/Params.cpp.o ../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
/usr/include/c++/8/bits/vector.tcc: In function 'void RDKit::TDTParseUtils::ParseNumberList(std::__cxx11::string, std::vector<T>&, std::istream*) [with T = double]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitForceField.so.1.2018.09.1 ../../lib/libRDKitForceField.so.1 ../../lib/libRDKitForceField.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 57%] Built target ForceField
make -f Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/DependInfo.cmake --color=
Scanning dependencies of target ForceFieldHelpers
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 57%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/UFF/AtomTyper.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/c++  -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceFieldHelpers.dir/UFF/AtomTyper.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/UFF/AtomTyper.cpp
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/token_functions.hpp:34,
                 from /usr/include/boost/token_iterator.hpp:24,
                 from /usr/include/boost/tokenizer.hpp:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/TDTMolSupplier.cpp:12:
/usr/include/c++/8/bits/stl_vector.h: In member function 'RDKit::ROMol* RDKit::TDTMolSupplier::parseMol(std::__cxx11::string)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/token_functions.hpp:34,
                 from /usr/include/boost/token_iterator.hpp:24,
                 from /usr/include/boost/tokenizer.hpp:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/TDTMolSupplier.cpp:12:
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 57%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TplFileWriter.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/TplFileWriter.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/TplFileWriter.cpp
[ 57%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/UFF/Builder.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/c++  -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceFieldHelpers.dir/UFF/Builder.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/UFF/Builder.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/TplFileParser.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/TplFileParser.cpp:12:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/TplFileParser.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 57%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/PDBParser.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/PDBParser.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/PDBParser.cpp
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/TplFileParser.cpp:12:
/usr/include/c++/8/bits/stl_vector.h: In function 'RDKit::Conformer* RDKit::ParseConfData(std::istream*, unsigned int&, RDKit::RWMol*, unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 58%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/MMFF/AtomTyper.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/c++  -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceFieldHelpers.dir/MMFF/AtomTyper.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/MMFF/AtomTyper.cpp
/usr/include/c++/8/bits/stl_vector.h: In function 'void RDKit::ParseTPLAtomLine(std::__cxx11::string, unsigned int, RDKit::RWMol*, RDKit::Conformer*)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 58%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/MMFF/Builder.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/c++  -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceFieldHelpers.dir/MMFF/Builder.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/MMFF/Builder.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/PDBParser.cpp:16:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/PDBParser.cpp:16:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/PDBParser.cpp:16:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/PDBParser.cpp:16:
/usr/include/c++/8/bits/stl_vector.h: In function 'void RDKit::PDBConformerLine(RDKit::RWMol*, const char*, unsigned int, RDKit::Conformer*&, int&)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 58%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/PDBWriter.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/PDBWriter.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/PDBWriter.cpp
/usr/include/c++/8/bits/stl_vector.h: In function 'void RDKit::PDBAtomLine(RDKit::RWMol*, const char*, unsigned int, unsigned int, std::map<int, RDKit::Atom*>&)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/MMFF/AtomTyper.cpp:13:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 58%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionAngleM6.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/c++  -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionAngleM6.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionAngleM6.cpp
[ 58%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/PDBSupplier.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/PDBSupplier.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/PDBSupplier.cpp
[ 59%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MaeMolSupplier.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/MaeMolSupplier.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MaeMolSupplier.cpp
[ 59%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionPreferences.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/c++  -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionPreferences.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.cpp
[ 59%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/ProximityBonds.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/ProximityBonds.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/ProximityBonds.cpp
[ 59%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SequenceParsers.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/SequenceParsers.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SequenceParsers.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/BadFileException.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MaeMolSupplier.cpp:13:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/BadFileException.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MaeMolSupplier.cpp:13:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/BadFileException.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MaeMolSupplier.cpp:13:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'virtual RDKit::ROMol* RDKit::MaeMolSupplier::next()':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/BadFileException.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MaeMolSupplier.cpp:13:
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SequenceParsers.cpp:13:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.h:13,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
[ 59%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SequenceWriters.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/SequenceWriters.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SequenceWriters.cpp
[ 59%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SVGParser.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/SVGParser.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SVGParser.cpp
/usr/include/c++/8/bits/vector.tcc: In constructor 'ForceFields::CrystalFF::ExpTorsionAngleCollection::ExpTorsionAngleCollection(const string&)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'RDKit::RWMol* RDKit::FASTAToMol(const char*, bool, int)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 59%] Linking CXX shared library ../../../lib/libRDKitForceFieldHelpers.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/ForceFieldHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitForceFieldHelpers.so.1 -o ../../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 CMakeFiles/ForceFieldHelpers.dir/UFF/AtomTyper.cpp.o CMakeFiles/ForceFieldHelpers.dir/UFF/Builder.cpp.o CMakeFiles/ForceFieldHelpers.dir/MMFF/AtomTyper.cpp.o CMakeFiles/ForceFieldHelpers.dir/MMFF/Builder.cpp.o CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionAngleM6.cpp.o CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionPreferences.cpp.o ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitForceField.so.1.2018.09.1 ../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1 ../../../lib/libRDKitForceFieldHelpers.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 59%] Built target ForceFieldHelpers
make -f Code/DistGeom/CMakeFiles/DistGeometry.dir/build.make Code/DistGeom/CMakeFiles/DistGeometry.dir/depend
make -f Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/DependInfo.cmake --color=
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom/CMakeFiles/DistGeometry.dir/DependInfo.cmake --color=
Scanning dependencies of target MolAlign
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build
Scanning dependencies of target DistGeometry
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/DistGeom/CMakeFiles/DistGeometry.dir/build.make Code/DistGeom/CMakeFiles/DistGeometry.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 59%] Building CXX object Code/DistGeom/CMakeFiles/DistGeometry.dir/DistGeomUtils.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/c++  -DDistGeometry_EXPORTS -DRDKIT_DISTGEOMETRY_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/DistGeometry.dir/DistGeomUtils.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/DistGeomUtils.cpp
[ 59%] Building CXX object Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/AlignMolecules.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/c++  -DMolAlign_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLALIGN_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolAlign.dir/AlignMolecules.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/AlignMolecules.cpp
make -f Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build.make Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/DependInfo.cmake --color=
Scanning dependencies of target rdForceField
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build.make Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 60%] Building CXX object Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/ForceField.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdForceField_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdForceField.dir/ForceField.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/Wrap/ForceField.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SVGParser.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SVGParser.cpp:10:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SVGParser.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDGeom::Point3D&}; _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Vector.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Matrix.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/SquareMatrix.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Transform3D.h:16,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/AlignMolecules.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/AlignMolecules.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SVGParser.cpp:10:
/usr/include/c++/8/bits/stl_vector.h: In function 'RDKit::RWMol* RDKit::RDKitSVGToMol(std::istream*, bool, bool)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 60%] Building CXX object Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/O3AAlignMolecules.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/c++  -DMolAlign_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLALIGN_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolAlign.dir/O3AAlignMolecules.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/O3AAlignMolecules.cpp
[ 60%] Linking CXX shared library ../../../lib/libRDKitFileParsers.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/FileParsers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitFileParsers.so.1 -o ../../../lib/libRDKitFileParsers.so.1.2018.09.1 CMakeFiles/FileParsers.dir/Mol2FileParser.cpp.o CMakeFiles/FileParsers.dir/MolFileParser.cpp.o CMakeFiles/FileParsers.dir/MolFileStereochem.cpp.o CMakeFiles/FileParsers.dir/MolFileWriter.cpp.o CMakeFiles/FileParsers.dir/ForwardSDMolSupplier.cpp.o CMakeFiles/FileParsers.dir/SDMolSupplier.cpp.o CMakeFiles/FileParsers.dir/SDWriter.cpp.o CMakeFiles/FileParsers.dir/SmilesMolSupplier.cpp.o CMakeFiles/FileParsers.dir/SmilesWriter.cpp.o CMakeFiles/FileParsers.dir/TDTMolSupplier.cpp.o CMakeFiles/FileParsers.dir/TDTWriter.cpp.o CMakeFiles/FileParsers.dir/TplFileParser.cpp.o CMakeFiles/FileParsers.dir/TplFileWriter.cpp.o CMakeFiles/FileParsers.dir/PDBParser.cpp.o CMakeFiles/FileParsers.dir/PDBWriter.cpp.o CMakeFiles/FileParsers.dir/PDBSupplier.cpp.o CMakeFiles/FileParsers.dir/MaeMolSupplier.cpp.o CMakeFiles/FileParsers.dir/ProximityBonds.cpp.o CMakeFiles/FileParsers.dir/SequenceParsers.cpp.o CMakeFiles/FileParsers.dir/SequenceWriters.cpp.o CMakeFiles/FileParsers.dir/SVGParser.cpp.o ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 -lmaeparser ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
[ 60%] Building CXX object Code/DistGeom/CMakeFiles/DistGeometry.dir/TriangleSmooth.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/c++  -DDistGeometry_EXPORTS -DRDKIT_DISTGEOMETRY_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/DistGeometry.dir/TriangleSmooth.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/TriangleSmooth.cpp
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1 ../../../lib/libRDKitFileParsers.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 60%] Built target FileParsers
make -f Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/DependInfo.cmake --color=
Scanning dependencies of target rdForceFieldHelpers
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make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 60%] Building CXX object Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/rdForceFields.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdForceFieldHelpers_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdForceFieldHelpers.dir/rdForceFields.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/Wrap/rdForceFields.cpp
[ 60%] Building CXX object Code/DistGeom/CMakeFiles/DistGeometry.dir/DistViolationContrib.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/c++  -DDistGeometry_EXPORTS -DRDKIT_DISTGEOMETRY_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/DistGeometry.dir/DistViolationContrib.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/DistViolationContrib.cpp
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/Wrap/ForceField.cpp: In member function 'double ForceFields::PyForceField::calcEnergyWithPos(const boost::python::api::object&)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/Wrap/ForceField.cpp:135:12: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       c[i] = python::extract<double>(pos[i]);
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/Wrap/ForceField.cpp: In member function 'PyObject* ForceFields::PyForceField::calcGradWithPos(const boost::python::api::object&)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/Wrap/ForceField.cpp:169:12: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       c[i] = python::extract<double>(pos[i]);
[ 60%] Building CXX object Code/DistGeom/CMakeFiles/DistGeometry.dir/ChiralViolationContrib.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/c++  -DDistGeometry_EXPORTS -DRDKIT_DISTGEOMETRY_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/DistGeometry.dir/ChiralViolationContrib.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/ChiralViolationContrib.cpp
[ 60%] Linking CXX shared library ../../../lib/libRDKitMolAlign.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolAlign.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitMolAlign.so.1 -o ../../../lib/libRDKitMolAlign.so.1.2018.09.1 CMakeFiles/MolAlign.dir/AlignMolecules.cpp.o CMakeFiles/MolAlign.dir/O3AAlignMolecules.cpp.o ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitAlignment.so.1.2018.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitForceField.so.1.2018.09.1 ../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolAlign.so.1.2018.09.1 ../../../lib/libRDKitMolAlign.so.1 ../../../lib/libRDKitMolAlign.so
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[ 60%] Built target MolAlign
make -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/depend
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cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/DependInfo.cmake --color=
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[ 60%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/testFeatures.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLCHEMICALFEATURES_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testFeatures.dir/testFeatures.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/testFeatures.cpp
[ 60%] Linking CXX shared library ../../lib/libRDKitDistGeometry.so
[ 60%] Linking CXX shared module ../../../../rdkit/Chem/rdForceFieldHelpers.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/cmake -E cmake_link_script CMakeFiles/DistGeometry.dir/link.txt --verbose=1
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdForceFieldHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdForceFieldHelpers.so CMakeFiles/rdForceFieldHelpers.dir/rdForceFields.cpp.o ../../../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitForceField.so.1.2018.09.1 ../../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitDistGeometry.so.1 -o ../../lib/libRDKitDistGeometry.so.1.2018.09.1 CMakeFiles/DistGeometry.dir/DistGeomUtils.cpp.o CMakeFiles/DistGeometry.dir/TriangleSmooth.cpp.o CMakeFiles/DistGeometry.dir/DistViolationContrib.cpp.o CMakeFiles/DistGeometry.dir/ChiralViolationContrib.cpp.o ../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../lib/libRDKitForceField.so.1.2018.09.1 ../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitDistGeometry.so.1.2018.09.1 ../../lib/libRDKitDistGeometry.so.1 ../../lib/libRDKitDistGeometry.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 60%] Built target DistGeometry
make -f Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/depend
[ 60%] Built target rdForceFieldHelpers
make -f Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/depend
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cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
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Scanning dependencies of target testShapeHelpers
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
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make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
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make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 60%] Building CXX object Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/testShapeHelpers.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SHAPEHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testShapeHelpers.dir/testShapeHelpers.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers/testShapeHelpers.cpp
[ 60%] Building CXX object Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/test1.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testMolCatalog.dir/test1.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolCatalog/test1.cpp
[ 60%] Linking CXX shared module ../../../rdkit/ForceField/rdForceField.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdForceField.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../rdkit/ForceField/rdForceField.so CMakeFiles/rdForceField.dir/ForceField.cpp.o ../../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../lib/libRDKitForceField.so.1.2018.09.1 ../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 60%] Built target rdForceField
make -f Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build.make Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolCatalog/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMolCatalog
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build.make Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 61%] Building CXX object Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/rdMolCatalog.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolCatalog_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMolCatalog.dir/rdMolCatalog.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolCatalog/Wrap/rdMolCatalog.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/testFeatures.cpp:16:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/testFeatures.cpp:16:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 61%] Linking CXX executable testShapeHelpers
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testShapeHelpers.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testShapeHelpers.dir/testShapeHelpers.cpp.o  -o testShapeHelpers ../../../lib/libRDKitShapeHelpers.so.1.2018.09.1 ../../../lib/libRDKitMolAlign.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitAlignment.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitForceField.so.1.2018.09.1 ../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 61%] Built target testShapeHelpers
make -f Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/DependInfo.cmake --color=
Scanning dependencies of target FMCS
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 61%] Building CXX object Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/FMCS.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/c++  -DFMCS_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FMCS.dir/FMCS.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/FMCS.cpp
[ 61%] Linking CXX executable testFeatures
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFeatures.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testFeatures.dir/testFeatures.cpp.o  -o testFeatures ../../../lib/libRDKitMolChemicalFeatures.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 61%] Built target testFeatures
make -f Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MMPA /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/DependInfo.cmake --color=
Scanning dependencies of target MMPA
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 61%] Building CXX object Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/MMPA.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA && /usr/bin/c++  -DMMPA_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MMPA_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MMPA.dir/MMPA.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MMPA/MMPA.cpp
[ 61%] Linking CXX executable testMolCatalog
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolCatalog.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testMolCatalog.dir/test1.cpp.o  -o testMolCatalog ../../../lib/libRDKitMolCatalog.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lcoordgenlibs -lpthread -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 61%] Built target testMolCatalog
[ 61%] Building CXX object Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/Seed.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/c++  -DFMCS_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FMCS.dir/Seed.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Seed.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MMPA/MMPA.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 61%] Linking CXX shared module ../../../../rdkit/Chem/rdMolCatalog.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolCatalog.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdMolCatalog.so CMakeFiles/rdMolCatalog.dir/rdMolCatalog.cpp.o ../../../../lib/libRDKitMolCatalog.so.1.2018.09.1 ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 61%] Built target rdMolCatalog
[ 61%] Building CXX object Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/MaximumCommonSubgraph.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/c++  -DFMCS_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FMCS.dir/MaximumCommonSubgraph.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/MaximumCommonSubgraph.cpp
[ 61%] Linking CXX shared library ../../../lib/libRDKitMMPA.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMPA.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitMMPA.so.1 -o ../../../lib/libRDKitMMPA.so.1.2018.09.1 CMakeFiles/MMPA.dir/MMPA.cpp.o ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMMPA.so.1.2018.09.1 ../../../lib/libRDKitMMPA.so.1 ../../../lib/libRDKitMMPA.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 61%] Built target MMPA
make -f Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/DependInfo.cmake --color=
Scanning dependencies of target trajectoryTest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 61%] Building CXX object Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/trajectoryTest.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_TRAJECTORY_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/trajectoryTest.dir/trajectoryTest.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory/trajectoryTest.cpp
make -f Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SubstructLibrary /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/DependInfo.cmake --color=
Scanning dependencies of target substructLibraryTest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 61%] Building CXX object Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/substructLibraryTest.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBSTRUCTLIBRARY_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/substructLibraryTest.dir/substructLibraryTest.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SubstructLibrary/substructLibraryTest.cpp
[ 61%] Building CXX object Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/SubstructMatchCustom.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/c++  -DFMCS_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FMCS.dir/SubstructMatchCustom.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/SubstructMatchCustom.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory/Trajectory.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory/trajectoryTest.cpp:13:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
make -f Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SubstructLibrary/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/DependInfo.cmake --color=
Scanning dependencies of target rdSubstructLibrary
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 61%] Building CXX object Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/rdSubstructLibrary.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSubstructLibrary_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdSubstructLibrary.dir/rdSubstructLibrary.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SubstructLibrary/Wrap/rdSubstructLibrary.cpp
/usr/include/c++/8/bits/vector.tcc: In function 'void testAddConformersFromTrajectory()':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 62%] Linking CXX executable trajectoryTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory && /usr/bin/cmake -E cmake_link_script CMakeFiles/trajectoryTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/trajectoryTest.dir/trajectoryTest.cpp.o  -o trajectoryTest ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../../lib/libRDKitForceField.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 62%] Built target trajectoryTest
make -f Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolInterchange /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/DependInfo.cmake --color=
Scanning dependencies of target molInterchangeTest1
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 62%] Building CXX object Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/test1.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLINTERCHANGE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/rapidjson -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/molInterchangeTest1.dir/test1.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolInterchange/test1.cpp
[ 62%] Linking CXX executable substructLibraryTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary && /usr/bin/cmake -E cmake_link_script CMakeFiles/substructLibraryTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/substructLibraryTest.dir/substructLibraryTest.cpp.o  -o substructLibraryTest ../../../lib/libRDKitSubstructLibrary.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 62%] Built target substructLibraryTest
[ 62%] Building CXX object Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/SubstructLibraryWrap.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSubstructLibrary_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdSubstructLibrary.dir/SubstructLibraryWrap.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SubstructLibrary/Wrap/SubstructLibraryWrap.cpp
[ 62%] Linking CXX shared library ../../../lib/libRDKitFMCS.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/cmake -E cmake_link_script CMakeFiles/FMCS.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitFMCS.so.1 -o ../../../lib/libRDKitFMCS.so.1.2018.09.1 CMakeFiles/FMCS.dir/FMCS.cpp.o CMakeFiles/FMCS.dir/Seed.cpp.o CMakeFiles/FMCS.dir/MaximumCommonSubgraph.cpp.o CMakeFiles/FMCS.dir/SubstructMatchCustom.cpp.o ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lcoordgenlibs -lmaeparser -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitFMCS.so.1.2018.09.1 ../../../lib/libRDKitFMCS.so.1 ../../../lib/libRDKitFMCS.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 62%] Built target FMCS
make -f Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/DependInfo.cmake --color=
Scanning dependencies of target rdmolfiles
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 62%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/rdmolfiles.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdmolfiles.dir/rdmolfiles.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/rdmolfiles.cpp
[ 62%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/ForwardSDMolSupplier.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdmolfiles.dir/ForwardSDMolSupplier.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/ForwardSDMolSupplier.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolInterchange/test1.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 62%] Linking CXX executable molInterchangeTest1
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange && /usr/bin/cmake -E cmake_link_script CMakeFiles/molInterchangeTest1.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/molInterchangeTest1.dir/test1.cpp.o  -o molInterchangeTest1 ../../../lib/libRDKitMolInterchange.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lcoordgenlibs -lpthread -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 62%] Built target molInterchangeTest1
[ 62%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/MaeMolSupplier.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdmolfiles.dir/MaeMolSupplier.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/MaeMolSupplier.cpp
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/ForwardSDMolSupplier.cpp:23:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:185:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       off_type py_pos = bp::extract<off_type>(py_tell());
                                                        ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:155:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
         off_type py_pos = bp::extract<off_type>(py_tell());
                                                          ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:336:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       result = off_type(bp::extract<off_type>(py_tell()));
                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekpos(boost_adaptbx::python::streambuf::pos_type, std::ios_base::openmode)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:336:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       result = off_type(bp::extract<off_type>(py_tell()));
                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 63%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SDMolSupplier.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdmolfiles.dir/SDMolSupplier.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/SDMolSupplier.cpp
[ 63%] Linking CXX shared module ../../../../rdkit/Chem/rdSubstructLibrary.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdSubstructLibrary.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdSubstructLibrary.so CMakeFiles/rdSubstructLibrary.dir/rdSubstructLibrary.cpp.o CMakeFiles/rdSubstructLibrary.dir/SubstructLibraryWrap.cpp.o ../../../../lib/libRDKitSubstructLibrary.so.1.2018.09.1 ../../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make -f Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build.make Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/UFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/DependInfo.cmake --color=
Scanning dependencies of target testUFFForceField
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build.make Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 63%] Building CXX object Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/testUFFForceField.cpp.o
[ 63%] Built target rdSubstructLibrary
[ 63%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/TDTMolSupplier.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdmolfiles.dir/TDTMolSupplier.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/TDTMolSupplier.cpp
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/UFF && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testUFFForceField.dir/testUFFForceField.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/testUFFForceField.cpp
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/MaeMolSupplier.cpp:21:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekpos(boost_adaptbx::python::streambuf::pos_type, std::ios_base::openmode)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:336:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       result = off_type(bp::extract<off_type>(py_tell()));
                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:185:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       off_type py_pos = bp::extract<off_type>(py_tell());
                                                        ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:155:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
         off_type py_pos = bp::extract<off_type>(py_tell());
                                                          ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:336:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       result = off_type(bp::extract<off_type>(py_tell()));
                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/SDMolSupplier.cpp:13:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'void RDKit::setStreamIndices(RDKit::SDMolSupplier&, boost::python::api::object)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 63%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SmilesMolSupplier.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdmolfiles.dir/SmilesMolSupplier.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/SmilesMolSupplier.cpp
make -f Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/DependInfo.cmake --color=
Scanning dependencies of target DistGeomHelpers
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 63%] Building CXX object Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/BoundsMatrixBuilder.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/c++  -DDistGeomHelpers_EXPORTS -DRDKIT_DISTGEOMHELPERS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/DistGeomHelpers.dir/BoundsMatrixBuilder.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.cpp
[ 63%] Linking CXX executable testUFFForceField
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/UFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testUFFForceField.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testUFFForceField.dir/testUFFForceField.cpp.o  -o testUFFForceField ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitForceField.so.1.2018.09.1 ../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lcoordgenlibs -lmaeparser -lpthread 
make -f Code/DistGeom/CMakeFiles/testDistGeom.dir/build.make Code/DistGeom/CMakeFiles/testDistGeom.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom/CMakeFiles/testDistGeom.dir/DependInfo.cmake --color=
Scanning dependencies of target testDistGeom
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/DistGeom/CMakeFiles/testDistGeom.dir/build.make Code/DistGeom/CMakeFiles/testDistGeom.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 63%] Building CXX object Code/DistGeom/CMakeFiles/testDistGeom.dir/testDistGeom.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/c++  -DRDKIT_DISTGEOMETRY_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testDistGeom.dir/testDistGeom.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/testDistGeom.cpp
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 63%] Built target testUFFForceField
make -f Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build.make Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/DependInfo.cmake --color=
Scanning dependencies of target DistGeom
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build.make Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 63%] Building CXX object Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/DistGeom.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap && /usr/bin/c++  -DDistGeom_EXPORTS -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/DistGeom.dir/DistGeom.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/Wrap/DistGeom.cpp
[ 63%] Linking CXX executable testDistGeom
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDistGeom.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testDistGeom.dir/testDistGeom.cpp.o  -o testDistGeom ../../lib/libRDKitDistGeometry.so.1.2018.09.1 ../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../lib/libRDKitForceField.so.1.2018.09.1 ../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 63%] Built target testDistGeom
[ 63%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SmilesWriter.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdmolfiles.dir/SmilesWriter.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/SmilesWriter.cpp
In file included from /usr/include/c++/8/map:60,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/Wrap/DistGeom.cpp:12:
/usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<std::pair<int, int>&&>, std::tuple<>}; _Key = std::pair<int, int>; _Val = std::pair<const std::pair<int, int>, double>; _KeyOfValue = std::_Select1st<std::pair<const std::pair<int, int>, double> >; _Compare = std::less<std::pair<int, int> >; _Alloc = std::allocator<std::pair<const std::pair<int, int>, double> >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<std::pair<int, int>, std::pair<const std::pair<int, int>, double>, std::_Select1st<std::pair<const std::pair<int, int>, double> >, std::less<std::pair<int, int> >, std::allocator<std::pair<const std::pair<int, int>, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const std::pair<int, int>, double> >'} changed in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:61,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/Wrap/DistGeom.cpp:12:
/usr/include/c++/8/bits/stl_map.h: In function 'PyObject* RDKit::embedBoundsMatrix(boost::python::api::object, int, bool, int, boost::python::list, int)':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<std::pair<int, int>, std::pair<const std::pair<int, int>, double>, std::_Select1st<std::pair<const std::pair<int, int>, double> >, std::less<std::pair<int, int> >, std::allocator<std::pair<const std::pair<int, int>, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const std::pair<int, int>, double> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 63%] Linking CXX shared module ../../../rdkit/DistanceGeometry/DistGeom.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/DistGeom.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../rdkit/DistanceGeometry/DistGeom.so CMakeFiles/DistGeom.dir/DistGeom.cpp.o ../../../lib/libRDKitDistGeometry.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../lib/libRDKitForceField.so.1.2018.09.1 ../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 63%] Built target DistGeom
[ 63%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SDWriter.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdmolfiles.dir/SDWriter.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/SDWriter.cpp
[ 63%] Building CXX object Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/Embedder.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/c++  -DDistGeomHelpers_EXPORTS -DRDKIT_DISTGEOMHELPERS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/DistGeomHelpers.dir/Embedder.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/Embedder.cpp
make -f Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/DependInfo.cmake --color=
Scanning dependencies of target graphmolMolOpsTest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 63%] Building CXX object Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/molopstest.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/graphmolMolOpsTest.dir/molopstest.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/molopstest.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:16,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/Embedder.h:16,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/Embedder.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:16,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/Embedder.h:16,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/Embedder.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/SmilesWriter.cpp:20:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekpos(boost_adaptbx::python::streambuf::pos_type, std::ios_base::openmode)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:336:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       result = off_type(bp::extract<off_type>(py_tell()));
                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:185:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       off_type py_pos = bp::extract<off_type>(py_tell());
                                                        ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:155:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
         off_type py_pos = bp::extract<off_type>(py_tell());
                                                          ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:336:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       result = off_type(bp::extract<off_type>(py_tell()));
                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In function 'void RDKit::DGeomHelpers::detail::embedHelper_(int, int, RDKit::DGeomHelpers::detail::EmbedArgs*)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/SDWriter.cpp:21:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:185:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       off_type py_pos = bp::extract<off_type>(py_tell());
                                                        ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:155:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
         off_type py_pos = bp::extract<off_type>(py_tell());
                                                          ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekpos(boost_adaptbx::python::streambuf::pos_type, std::ios_base::openmode)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:336:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       result = off_type(bp::extract<off_type>(py_tell()));
                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:336:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       result = off_type(bp::extract<off_type>(py_tell()));
                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make -f Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/DependInfo.cmake --color=
[ 64%] Linking CXX shared library ../../../lib/libRDKitDistGeomHelpers.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/DistGeomHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitDistGeomHelpers.so.1 -o ../../../lib/libRDKitDistGeomHelpers.so.1.2018.09.1 CMakeFiles/DistGeomHelpers.dir/BoundsMatrixBuilder.cpp.o CMakeFiles/DistGeomHelpers.dir/Embedder.cpp.o ../../../lib/libRDKitDistGeometry.so.1.2018.09.1 ../../../lib/libRDKitAlignment.so.1.2018.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitForceField.so.1.2018.09.1 ../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
Scanning dependencies of target graphmolTestsCatch
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 64%] Building CXX object Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/catch_tests.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/graphmolTestsCatch.dir/catch_tests.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/catch_tests.cpp
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitDistGeomHelpers.so.1.2018.09.1 ../../../lib/libRDKitDistGeomHelpers.so.1 ../../../lib/libRDKitDistGeomHelpers.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 64%] Built target DistGeomHelpers
make -f Code/GraphMol/CMakeFiles/graphmolTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolTest1.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolTest1.dir/DependInfo.cmake --color=
Scanning dependencies of target graphmolTest1
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolTest1.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 65%] Building CXX object Code/GraphMol/CMakeFiles/graphmolTest1.dir/test1.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/graphmolTest1.dir/test1.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/test1.cpp
[ 65%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/TDTWriter.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdmolfiles.dir/TDTWriter.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/TDTWriter.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/molopstest.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/molopstest.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/molopstest.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/test1.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:159:5: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/test1.cpp:12:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/test1.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/TDTWriter.cpp:21:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:185:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       off_type py_pos = bp::extract<off_type>(py_tell());
                                                        ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:155:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
         off_type py_pos = bp::extract<off_type>(py_tell());
                                                          ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekpos(boost_adaptbx::python::streambuf::pos_type, std::ios_base::openmode)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:336:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       result = off_type(bp::extract<off_type>(py_tell()));
                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:336:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       result = off_type(bp::extract<off_type>(py_tell()));
                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/test1.cpp:12:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void RDKit::RDProps::clearProp(const string&) const':
/usr/include/c++/8/bits/stl_vector.h:1318:58: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
       { return _M_erase(begin() + (__position - cbegin())); }
                                                          ^
/usr/include/c++/8/bits/stl_vector.h: In member function 'void RDKit::RDProps::clearComputedProps() const':
/usr/include/c++/8/bits/stl_vector.h:1318:58: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
       { return _M_erase(begin() + (__position - cbegin())); }
                                                          ^
[ 66%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/PDBWriter.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdmolfiles.dir/PDBWriter.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/PDBWriter.cpp
[ 66%] Linking CXX executable graphmolTest1
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolTest1.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/graphmolTest1.dir/test1.cpp.o  -o graphmolTest1 ../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../lib/libRDKitForceField.so.1.2018.09.1 ../../lib/libRDKitDepictor.so.1.2018.09.1 ../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/molopstest.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In function 'void testAddHsCoords()':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 66%] Built target graphmolTest1
make -f Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/DependInfo.cmake --color=
Scanning dependencies of target graphmoltestPicklerGlobalSetting
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 66%] Building CXX object Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/testPicklerGlobalSettings.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/graphmoltestPicklerGlobalSetting.dir/testPicklerGlobalSettings.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/testPicklerGlobalSettings.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include/catch.hpp:465,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/catch_tests.cpp:3:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include/catch.hpp:465,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/catch_tests.cpp:3:
/usr/include/c++/8/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/molopstest.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void RDKit::Dict::setPODVal(const string&, T) [with T = int]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include/catch.hpp:465,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/catch_tests.cpp:3:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/PDBWriter.cpp:20:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:185:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       off_type py_pos = bp::extract<off_type>(py_tell());
                                                        ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:155:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
         off_type py_pos = bp::extract<off_type>(py_tell());
                                                          ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekpos(boost_adaptbx::python::streambuf::pos_type, std::ios_base::openmode)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:336:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       result = off_type(bp::extract<off_type>(py_tell()));
                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:336:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       result = off_type(bp::extract<off_type>(py_tell()));
                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/testPicklerGlobalSettings.cpp:33:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 66%] Linking CXX shared module ../../../rdkit/Chem/rdmolfiles.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdmolfiles.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../rdkit/Chem/rdmolfiles.so CMakeFiles/rdmolfiles.dir/rdmolfiles.cpp.o CMakeFiles/rdmolfiles.dir/ForwardSDMolSupplier.cpp.o CMakeFiles/rdmolfiles.dir/MaeMolSupplier.cpp.o CMakeFiles/rdmolfiles.dir/SDMolSupplier.cpp.o CMakeFiles/rdmolfiles.dir/TDTMolSupplier.cpp.o CMakeFiles/rdmolfiles.dir/SmilesMolSupplier.cpp.o CMakeFiles/rdmolfiles.dir/SmilesWriter.cpp.o CMakeFiles/rdmolfiles.dir/SDWriter.cpp.o CMakeFiles/rdmolfiles.dir/TDTWriter.cpp.o CMakeFiles/rdmolfiles.dir/PDBWriter.cpp.o ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 66%] Built target rdmolfiles
make -f Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/DependInfo.cmake --color=
[ 66%] Linking CXX executable graphmoltestPicklerGlobalSetting
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmoltestPicklerGlobalSetting.dir/link.txt --verbose=1
Scanning dependencies of target graphmoltestChirality
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/build
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/graphmoltestPicklerGlobalSetting.dir/testPicklerGlobalSettings.cpp.o  -o graphmoltestPicklerGlobalSetting ../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../lib/libRDKitDepictor.so.1.2018.09.1 ../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 66%] Built target graphmoltestPicklerGlobalSetting
make -f Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 66%] Building CXX object Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/testChirality.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/graphmoltestChirality.dir/testChirality.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/testChirality.cpp
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/DependInfo.cmake --color=
Scanning dependencies of target graphmoltestPickler
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 67%] Building CXX object Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/testPickler.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/graphmoltestPickler.dir/testPickler.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/testPickler.cpp
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/molopstest.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In function 'void testAddConformers()':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'void ____C_A_T_C_H____T_E_S_T____7()':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In function 'void testIssue212()':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/testPickler.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
[ 67%] Linking CXX executable graphmolTestsCatch
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolTestsCatch.dir/link.txt --verbose=1
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/testPickler.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/graphmolTestsCatch.dir/catch_tests.cpp.o  -o graphmolTestsCatch ../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../lib/libRDKitDepictor.so.1.2018.09.1 ../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/testPickler.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 67%] Built target graphmolTestsCatch
make -f Code/GraphMol/CMakeFiles/molBundleTest.dir/build.make Code/GraphMol/CMakeFiles/molBundleTest.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/molBundleTest.dir/DependInfo.cmake --color=
Scanning dependencies of target molBundleTest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/molBundleTest.dir/build.make Code/GraphMol/CMakeFiles/molBundleTest.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 67%] Building CXX object Code/GraphMol/CMakeFiles/molBundleTest.dir/testMolBundle.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/molBundleTest.dir/testMolBundle.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/testMolBundle.cpp
[ 67%] Linking CXX executable molBundleTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/molBundleTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/molBundleTest.dir/testMolBundle.cpp.o  -o molBundleTest ../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../lib/libRDKitDepictor.so.1.2018.09.1 ../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lcoordgenlibs -lmaeparser -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 67%] Built target molBundleTest
make -f Code/GraphMol/CMakeFiles/hanoiTest.dir/build.make Code/GraphMol/CMakeFiles/hanoiTest.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/hanoiTest.dir/DependInfo.cmake --color=
Scanning dependencies of target hanoiTest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/hanoiTest.dir/build.make Code/GraphMol/CMakeFiles/hanoiTest.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 67%] Building CXX object Code/GraphMol/CMakeFiles/hanoiTest.dir/hanoitest.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/hanoiTest.dir/hanoitest.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/hanoitest.cpp
[ 67%] Linking CXX executable graphmoltestPickler
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmoltestPickler.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/graphmoltestPickler.dir/testPickler.cpp.o  -o graphmoltestPickler ../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../lib/libRDKitDepictor.so.1.2018.09.1 ../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 67%] Built target graphmoltestPickler
make -f Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/build.make Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/DependInfo.cmake --color=
Scanning dependencies of target resMolSupplierTest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/build.make Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 67%] Building CXX object Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/resMolSupplierTest.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/resMolSupplierTest.dir/resMolSupplierTest.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/resMolSupplierTest.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/new_canon.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/hanoitest.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'void test7()':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 67%] Linking CXX executable graphmoltestChirality
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmoltestChirality.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/graphmoltestChirality.dir/testChirality.cpp.o  -o graphmoltestChirality ../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../lib/libRDKitDepictor.so.1.2018.09.1 ../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lcoordgenlibs -lpthread -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 67%] Built target graphmoltestChirality
make -f Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/DependInfo.cmake --color=
Scanning dependencies of target testDepictor
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make -f Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 67%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/testDepictor.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/c++  -DRDKIT_DEPICTOR_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testDepictor.dir/testDepictor.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/testDepictor.cpp
[ 68%] Linking CXX executable resMolSupplierTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/resMolSupplierTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/resMolSupplierTest.dir/resMolSupplierTest.cpp.o  -o resMolSupplierTest ../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../lib/libRDKitDepictor.so.1.2018.09.1 ../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lcoordgenlibs -lmaeparser -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 68%] Built target resMolSupplierTest
make -f Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build.make Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/DependInfo.cmake --color=
Scanning dependencies of target rdDepictor
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build.make Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/rdDepictor.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdDepictor_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdDepictor.dir/rdDepictor.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/Wrap/rdDepictor.cpp
[ 68%] Linking CXX executable hanoiTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/hanoiTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/hanoiTest.dir/hanoitest.cpp.o  -o hanoiTest ../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../lib/libRDKitDepictor.so.1.2018.09.1 ../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 68%] Built target hanoiTest
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/DependInfo.cmake --color=
Scanning dependencies of target smiTest1
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/test.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/smiTest1.dir/test.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/test.cpp
In file included from /usr/include/c++/8/set:60,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/SetQuery.h:13,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:29,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/testDepictor.cpp:13:
/usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_erase_aux(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator) [with _Key = int; _Val = std::pair<const int, RDGeom::Point2D>; _KeyOfValue = std::_Select1st<std::pair<const int, RDGeom::Point2D> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]':
/usr/include/c++/8/bits/stl_tree.h:2486:5: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDGeom::Point2D>; _KeyOfValue = std::_Select1st<std::pair<const int, RDGeom::Point2D> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:61,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:26,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/testDepictor.cpp:13:
/usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](std::map<_Key, _Tp, _Compare, _Alloc>::key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/8/set:60,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/SetQuery.h:13,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:29,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/testDepictor.cpp:13:
/usr/include/c++/8/bits/stl_tree.h: In function 'void test4()':
/usr/include/c++/8/bits/stl_tree.h:1141:2: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  _M_erase_aux(__position);
  ^~~~~~~~~~~~
/usr/include/c++/8/bits/stl_tree.h:1141:2: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  _M_erase_aux(__position);
  ^~~~~~~~~~~~
/usr/include/c++/8/bits/stl_tree.h:1141:2: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  _M_erase_aux(__position);
  ^~~~~~~~~~~~
In file included from /usr/include/c++/8/map:61,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:26,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/testDepictor.cpp:13:
/usr/include/c++/8/bits/stl_map.h: In function 'void testIssue2091304()':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In function 'void testIssue3122141()':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In function 'void testIssue2303566()':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In function 'void testIssue3135833()':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/RDDepictor.h:16,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/Wrap/rdDepictor.cpp:17:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h: In function 'unsigned int RDDepict::Compute2DCoords(RDKit::ROMol&, bool, bool, boost::python::dict&, unsigned int, unsigned int, int, bool, double, bool)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:289:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point2D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
     x = other.x;
         ~~~~~~^
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/test.cpp:13:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
[ 68%] Linking CXX executable testDepictor
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDepictor.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testDepictor.dir/testDepictor.cpp.o  -o testDepictor ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 68%] Built target testDepictor
make -f Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/DependInfo.cmake --color=
Scanning dependencies of target cxsmilesTest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/cxsmiles_test.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/cxsmilesTest.dir/cxsmiles_test.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/cxsmiles_test.cpp
[ 68%] Linking CXX shared module ../../../../rdkit/Chem/rdDepictor.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdDepictor.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdDepictor.so CMakeFiles/rdDepictor.dir/rdDepictor.cpp.o ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 68%] Built target rdDepictor
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/DependInfo.cmake --color=
Scanning dependencies of target smiTestCatch
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make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/catch_tests.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/smiTestCatch.dir/catch_tests.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/catch_tests.cpp
[ 68%] Linking CXX executable graphmolMolOpsTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolMolOpsTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/graphmolMolOpsTest.dir/molopstest.cpp.o  -o graphmolMolOpsTest ../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../lib/libRDKitDepictor.so.1.2018.09.1 ../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 68%] Built target graphmolMolOpsTest
make -f Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/DependInfo.cmake --color=
Scanning dependencies of target testMol2ToMol
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
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make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/testMol2ToMol.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testMol2ToMol.dir/testMol2ToMol.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/testMol2ToMol.cpp
[ 68%] Linking CXX executable cxsmilesTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/cxsmilesTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/cxsmilesTest.dir/cxsmiles_test.cpp.o  -o cxsmilesTest ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lcoordgenlibs -lpthread -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 68%] Built target cxsmilesTest
make -f Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/DependInfo.cmake --color=
Scanning dependencies of target testTplParser
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make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/testTpls.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testTplParser.dir/testTpls.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/testTpls.cpp
[ 68%] Linking CXX executable testMol2ToMol
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMol2ToMol.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testMol2ToMol.dir/testMol2ToMol.cpp.o  -o testMol2ToMol ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lcoordgenlibs -lpthread -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 68%] Built target testMol2ToMol
make -f Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/DependInfo.cmake --color=
Scanning dependencies of target testMolWriter
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/testMolWriter.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testMolWriter.dir/testMolWriter.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/testMolWriter.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/testMolWriter.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/testMolWriter.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 68%] Linking CXX executable testTplParser
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testTplParser.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testTplParser.dir/testTpls.cpp.o  -o testTplParser ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lcoordgenlibs -lpthread -lmaeparser 
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/testMolWriter.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 68%] Built target testTplParser
make -f Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/DependInfo.cmake --color=
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
Scanning dependencies of target testMolSupplier
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/testMolSupplier.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testMolSupplier.dir/testMolSupplier.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/testMolSupplier.cpp
/usr/include/c++/8/bits/vector.tcc: In function 'void testBug3525799()':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include/catch.hpp:465,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/catch_tests.cpp:3:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include/catch.hpp:465,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/catch_tests.cpp:3:
/usr/include/c++/8/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/testMolSupplier.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::fpos<__mbstate_t>&}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In function 'void testGitHub23()':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/testMolWriter.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In function 'void testIssue265()':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/testMolSupplier.cpp:12:
/usr/include/c++/8/bits/stl_vector.h: In function 'void testSetStreamIndices()':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
[ 68%] Linking CXX executable smiTest1
[ 68%] Linking CXX executable testMolWriter
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolWriter.dir/link.txt --verbose=1
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/smiTest1.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testMolWriter.dir/testMolWriter.cpp.o  -o testMolWriter ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lcoordgenlibs -lpthread -lmaeparser 
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/smiTest1.dir/test.cpp.o  -o smiTest1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lcoordgenlibs -lpthread -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 68%] Built target testMolWriter
make -f Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/DependInfo.cmake --color=
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 68%] Built target smiTest1
make -f Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/DependInfo.cmake --color=
Scanning dependencies of target testSequence
Scanning dependencies of target testExtendedStereoParsing
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/testExtendedStereoParsing.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testExtendedStereoParsing.dir/testExtendedStereoParsing.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/testExtendedStereoParsing.cpp
[ 68%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/testSequence.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testSequence.dir/testSequence.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/testSequence.cpp
[ 68%] Linking CXX executable testSequence
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSequence.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testSequence.dir/testSequence.cpp.o  -o testSequence ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lcoordgenlibs -lpthread -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 68%] Built target testSequence
make -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/DependInfo.cmake --color=
Scanning dependencies of target fileParsersTest1
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
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make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/test1.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/fileParsersTest1.dir/test1.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/test1.cpp
[ 68%] Linking CXX executable testExtendedStereoParsing
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testExtendedStereoParsing.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testExtendedStereoParsing.dir/testExtendedStereoParsing.cpp.o  -o testExtendedStereoParsing ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 68%] Built target testExtendedStereoParsing
make -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/DependInfo.cmake --color=
Scanning dependencies of target fileParsersCatchTest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
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make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 69%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/catch_tests.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/fileParsersCatchTest.dir/catch_tests.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/catch_tests.cpp
[ 70%] Linking CXX executable testMolSupplier
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolSupplier.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testMolSupplier.dir/testMolSupplier.cpp.o  -o testMolSupplier ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 70%] Built target testMolSupplier
make -f Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Substruct /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/DependInfo.cmake --color=
Scanning dependencies of target testSubstructMatch
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 70%] Building CXX object Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/test1.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBSTRUCTMATCH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testSubstructMatch.dir/test1.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Substruct/test1.cpp
[ 70%] Linking CXX executable smiTestCatch
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/smiTestCatch.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/smiTestCatch.dir/catch_tests.cpp.o  -o smiTestCatch ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lcoordgenlibs -lpthread -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 70%] Built target smiTestCatch
make -f Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/DependInfo.cmake --color=
Scanning dependencies of target Descriptors
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 70%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/Crippen.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Descriptors.dir/Crippen.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Crippen.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Substruct/test1.cpp:17:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/test1.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/test1.cpp:12:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/test1.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'void test5QueryRoot()':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/GraphMol.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Crippen.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDKit::Descriptors::CrippenParams&}; _Tp = RDKit::Descriptors::CrippenParams; _Alloc = std::allocator<RDKit::Descriptors::CrippenParams>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Descriptors::CrippenParams>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Descriptors::CrippenParams*, std::vector<RDKit::Descriptors::CrippenParams> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/GraphMol.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Crippen.cpp:12:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Descriptors::CrippenParamCollection::CrippenParamCollection(const string&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Descriptors::CrippenParams*, std::vector<RDKit::Descriptors::CrippenParams> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
[ 70%] Linking CXX executable testSubstructMatch
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSubstructMatch.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testSubstructMatch.dir/test1.cpp.o  -o testSubstructMatch ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 70%] Built target testSubstructMatch
[ 70%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MolDescriptors.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Descriptors.dir/MolDescriptors.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/MolDescriptors.cpp
make -f Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/DependInfo.cmake --color=
Scanning dependencies of target testChemTransforms
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 71%] Building CXX object Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/testChemTransforms.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/c++  -DRDKIT_CHEMTRANSFORMS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testChemTransforms.dir/testChemTransforms.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/testChemTransforms.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include/catch.hpp:465,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/catch_tests.cpp:13:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include/catch.hpp:465,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/catch_tests.cpp:13:
/usr/include/c++/8/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
[ 71%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MolSurf.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Descriptors.dir/MolSurf.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/MolSurf.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/testChemTransforms.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/MolSurf.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 71%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/Lipinski.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Descriptors.dir/Lipinski.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Lipinski.cpp
/usr/include/c++/8/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, const char*)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'void testMolFileAtomValues()':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 71%] Linking CXX executable testChemTransforms
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/cmake -E cmake_link_script CMakeFiles/testChemTransforms.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testChemTransforms.dir/testChemTransforms.cpp.o  -o testChemTransforms ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 71%] Built target testChemTransforms
make -f Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/DependInfo.cmake --color=
Scanning dependencies of target filterCatalogTest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 71%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/filtercatalogtest.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/filterCatalogTest.dir/filtercatalogtest.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/filtercatalogtest.cpp
[ 72%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/ConnectivityDescriptors.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Descriptors.dir/ConnectivityDescriptors.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/ConnectivityDescriptors.cpp
[ 72%] Linking CXX executable fileParsersCatchTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/fileParsersCatchTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/fileParsersCatchTest.dir/catch_tests.cpp.o  -o fileParsersCatchTest ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lcoordgenlibs -lpthread -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 72%] Built target fileParsersCatchTest
[ 72%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MQN.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Descriptors.dir/MQN.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/MQN.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/GraphMol.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/ConnectivityDescriptors.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
make -f Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build.make Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/DependInfo.cmake --color=
Scanning dependencies of target rdfiltercatalog
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build.make Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 73%] Building CXX object Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/rdfiltercatalog.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfiltercatalog_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdfiltercatalog.dir/rdfiltercatalog.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/Wrap/rdfiltercatalog.cpp
[ 73%] Linking CXX executable fileParsersTest1
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/fileParsersTest1.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/fileParsersTest1.dir/test1.cpp.o  -o fileParsersTest1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 -lmaeparser ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
[ 73%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/Property.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Descriptors.dir/Property.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Property.cpp
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 73%] Built target fileParsersTest1
[ 73%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/AUTOCORR2D.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Descriptors.dir/AUTOCORR2D.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/AUTOCORR2D.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/filtercatalogtest.cpp:33:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, const char*)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'void testFilterCatalogEntry()':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 73%] Linking CXX executable filterCatalogTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/filterCatalogTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/filterCatalogTest.dir/filtercatalogtest.cpp.o  -o filterCatalogTest ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 73%] Built target filterCatalogTest
[ 73%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/Data3Ddescriptors.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Descriptors.dir/Data3Ddescriptors.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Data3Ddescriptors.cpp
[ 73%] Building CXX object Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/FilterCatalog.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfiltercatalog_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdfiltercatalog.dir/FilterCatalog.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/Wrap/FilterCatalog.cpp
make -f Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/DependInfo.cmake --color=
Scanning dependencies of target testFragCatalog
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 73%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/test1.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testFragCatalog.dir/test1.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/test1.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Property.h:36,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Property.cpp:32:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
[ 73%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MolData3Ddescriptors.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Descriptors.dir/MolData3Ddescriptors.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/MolData3Ddescriptors.cpp
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'std::vector<double> RDKit::Descriptors::Properties::computeProperties(const RDKit::ROMol&, bool) const':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void RDKit::Descriptors::Properties::annotateProperties(RDKit::ROMol&) const':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
make -f Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build.make Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/DependInfo.cmake --color=
Scanning dependencies of target rdfragcatalog
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build.make Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 73%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/rdfragcatalog.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfragcatalog_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdfragcatalog.dir/rdfragcatalog.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/Wrap/rdfragcatalog.cpp
[ 74%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/USRDescriptor.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Descriptors.dir/USRDescriptor.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/USRDescriptor.cpp
[ 74%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragCatalog.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfragcatalog_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdfragcatalog.dir/FragCatalog.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/Wrap/FragCatalog.cpp
[ 74%] Linking CXX executable testFragCatalog
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFragCatalog.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testFragCatalog.dir/test1.cpp.o  -o testFragCatalog ../../../lib/libRDKitFragCatalog.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 74%] Built target testFragCatalog
make -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/DependInfo.cmake --color=
Scanning dependencies of target testFingerprints
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 75%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/test1.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testFingerprints.dir/test1.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/test1.cpp
[ 75%] Linking CXX shared library ../../../lib/libRDKitDescriptors.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/Descriptors.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitDescriptors.so.1 -o ../../../lib/libRDKitDescriptors.so.1.2018.09.1 CMakeFiles/Descriptors.dir/Crippen.cpp.o CMakeFiles/Descriptors.dir/MolDescriptors.cpp.o CMakeFiles/Descriptors.dir/MolSurf.cpp.o CMakeFiles/Descriptors.dir/Lipinski.cpp.o CMakeFiles/Descriptors.dir/ConnectivityDescriptors.cpp.o CMakeFiles/Descriptors.dir/MQN.cpp.o CMakeFiles/Descriptors.dir/Property.cpp.o CMakeFiles/Descriptors.dir/AUTOCORR2D.cpp.o CMakeFiles/Descriptors.dir/Data3Ddescriptors.cpp.o CMakeFiles/Descriptors.dir/MolData3Ddescriptors.cpp.o CMakeFiles/Descriptors.dir/USRDescriptor.cpp.o ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1 ../../../lib/libRDKitDescriptors.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 75%] Built target Descriptors
make -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/DependInfo.cmake --color=
Scanning dependencies of target testFingerprintGenerators
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 75%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/testFingerprintGenerators.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testFingerprintGenerators.dir/testFingerprintGenerators.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/Wrap/FragCatalog.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp:12:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp: In function 'void testAtomPairNonSparseBitvector()':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp:225:42: warning: comparison of integer expressions of different signedness: 'int' and '__gnu_cxx::__alloc_traits<std::allocator<unsigned int>, unsigned int>::value_type' {aka 'unsigned int'} [-Wsign-compare]
         TEST_ASSERT(isSet == (it->second >= defaultCountBounds[i]));
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Invariant.h:152:9: note: in definition of macro 'TEST_ASSERT'
   if (!(expr)) {                                                      \
         ^~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp:242:42: warning: comparison of integer expressions of different signedness: 'int' and '__gnu_cxx::__alloc_traits<std::allocator<unsigned int>, unsigned int>::value_type' {aka 'unsigned int'} [-Wsign-compare]
         TEST_ASSERT(isSet == (it->second >= defaultCountBounds[i]));
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Invariant.h:152:9: note: in definition of macro 'TEST_ASSERT'
   if (!(expr)) {                                                      \
         ^~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp: In function 'void testBulkFP()':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp:2388:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<RDKit::SparseIntVect<long long unsigned int>*>::size_type' {aka 'unsigned int'} [-Wsign-compare]
     for (int i = 0; i < results->size(); i++) {
                     ~~^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/Wrap/FilterCatalog.cpp:31:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/test1.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
[ 75%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragCatParams.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfragcatalog_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdfragcatalog.dir/FragCatParams.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/Wrap/FragCatParams.cpp
/usr/include/c++/8/bits/vector.tcc: In member function 'void RDKit::FilterCatalogEntry::setProp(const string&, T) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDLog.h:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp:11:
/usr/include/c++/8/bits/stl_algo.h: In function '_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const unsigned int>]':
/usr/include/c++/8/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
     __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last,
     ^~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h: In function 'void testAtomPairOutput()':
/usr/include/c++/8/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
       return __find_if(__first, __last, __pred,
              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
          std::__iterator_category(__first));
          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
       return __find_if(__first, __last, __pred,
              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
          std::__iterator_category(__first));
          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
       return __find_if(__first, __last, __pred,
              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
          std::__iterator_category(__first));
          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
       return __find_if(__first, __last, __pred,
              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
          std::__iterator_category(__first));
          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
       return __find_if(__first, __last, __pred,
              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
          std::__iterator_category(__first));
          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
       return __find_if(__first, __last, __pred,
              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
          std::__iterator_category(__first));
          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void RDKit::RDProps::clearProp(const string&) const':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 76%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragCatGenerator.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfragcatalog_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdfragcatalog.dir/FragCatGenerator.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/Wrap/FragCatGenerator.cpp
In file included from /usr/include/c++/8/set:60,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/SetQuery.h:13,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:29,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp:12:
/usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, int>; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, int> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, int> >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, int>, std::_Select1st<std::pair<const long long unsigned int, int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, int> >'} changed in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:61,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:26,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp:12:
/usr/include/c++/8/bits/stl_map.h: In function 'void testRDKitFP()':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, int>, std::_Select1st<std::pair<const long long unsigned int, int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, int> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In function 'void testTopologicalTorsionFPOld()':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, int>, std::_Select1st<std::pair<const long long unsigned int, int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, int> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 76%] Linking CXX executable testFingerprintGenerators
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFingerprintGenerators.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testFingerprintGenerators.dir/testFingerprintGenerators.cpp.o  -o testFingerprintGenerators ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lcoordgenlibs -lmaeparser -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 76%] Built target testFingerprintGenerators
make -f Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolTransforms /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/DependInfo.cmake --color=
Scanning dependencies of target testMolTransforms
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 76%] Building CXX object Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/test1.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLTRANSFORMS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testMolTransforms.dir/test1.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolTransforms/test1.cpp
[ 76%] Linking CXX executable testFingerprints
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFingerprints.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testFingerprints.dir/test1.cpp.o  -o testFingerprints ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 76%] Built target testFingerprints
make -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/MMFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/DependInfo.cmake --color=
Scanning dependencies of target testMMFFForceFieldHelpers
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 76%] Building CXX object Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/testMMFFHelpers.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testMMFFForceFieldHelpers.dir/testMMFFHelpers.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/MMFF/testMMFFHelpers.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolTransforms/test1.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolTransforms/test1.cpp:12:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 76%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragFPGenerator.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfragcatalog_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdfragcatalog.dir/FragFPGenerator.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/Wrap/FragFPGenerator.cpp
/usr/include/c++/8/bits/stl_vector.h: In function 'void test1Canonicalization()':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/MMFF/testMMFFHelpers.cpp:15:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/MMFF/testMMFFHelpers.cpp:15:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 76%] Linking CXX executable testMolTransforms
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolTransforms.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testMolTransforms.dir/test1.cpp.o  -o testMolTransforms ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 76%] Built target testMolTransforms
make -f Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/UFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/DependInfo.cmake --color=
Scanning dependencies of target testUFFForceFieldHelpers
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 76%] Building CXX object Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/testUFFHelpers.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testUFFForceFieldHelpers.dir/testUFFHelpers.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/UFF/testUFFHelpers.cpp
[ 76%] Linking CXX executable testMMFFForceFieldHelpers
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMMFFForceFieldHelpers.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testMMFFForceFieldHelpers.dir/testMMFFHelpers.cpp.o  -o testMMFFForceFieldHelpers ../../../../lib/libRDKitDistGeomHelpers.so.1.2018.09.1 ../../../../lib/libRDKitDistGeometry.so.1.2018.09.1 ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitMolAlign.so.1.2018.09.1 ../../../../lib/libRDKitAlignment.so.1.2018.09.1 ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitForceField.so.1.2018.09.1 ../../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 76%] Built target testMMFFForceFieldHelpers
make -f Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build.make Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/CrystalFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/DependInfo.cmake --color=
Scanning dependencies of target testCrystalForceField
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build.make Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 76%] Building CXX object Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/testCrystalFF.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testCrystalForceField.dir/testCrystalFF.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/CrystalFF/testCrystalFF.cpp
[ 76%] Linking CXX shared module ../../../../rdkit/Chem/rdfragcatalog.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdfragcatalog.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdfragcatalog.so CMakeFiles/rdfragcatalog.dir/rdfragcatalog.cpp.o CMakeFiles/rdfragcatalog.dir/FragCatalog.cpp.o CMakeFiles/rdfragcatalog.dir/FragCatParams.cpp.o CMakeFiles/rdfragcatalog.dir/FragCatGenerator.cpp.o CMakeFiles/rdfragcatalog.dir/FragFPGenerator.cpp.o ../../../../lib/libRDKitFragCatalog.so.1.2018.09.1 ../../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/UFF/testUFFHelpers.cpp:15:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/UFF/testUFFHelpers.cpp:15:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 76%] Built target rdfragcatalog
make -f Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/DependInfo.cmake --color=
Scanning dependencies of target testDistGeomHelpers
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 76%] Building CXX object Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/testDgeomHelpers.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/c++  -DRDKIT_DISTGEOMHELPERS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testDistGeomHelpers.dir/testDgeomHelpers.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp
[ 76%] Linking CXX executable testCrystalForceField
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testCrystalForceField.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testCrystalForceField.dir/testCrystalFF.cpp.o  -o testCrystalForceField ../../../../lib/libRDKitDistGeomHelpers.so.1.2018.09.1 ../../../../lib/libRDKitDistGeometry.so.1.2018.09.1 ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitMolAlign.so.1.2018.09.1 ../../../../lib/libRDKitAlignment.so.1.2018.09.1 ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitForceField.so.1.2018.09.1 ../../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 76%] Built target testCrystalForceField
make -f Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build.make Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/DependInfo.cmake --color=
Scanning dependencies of target rdDistGeom
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build.make Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 77%] Building CXX object Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/rdDistGeom.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap && /usr/bin/c++  -DBOOST_PYTHON_MAX_ARITY=32 -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdDistGeom_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdDistGeom.dir/rdDistGeom.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp
[ 77%] Linking CXX executable testUFFForceFieldHelpers
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testUFFForceFieldHelpers.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testUFFForceFieldHelpers.dir/testUFFHelpers.cpp.o  -o testUFFForceFieldHelpers ../../../../lib/libRDKitDistGeomHelpers.so.1.2018.09.1 ../../../../lib/libRDKitDistGeometry.so.1.2018.09.1 ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitMolAlign.so.1.2018.09.1 ../../../../lib/libRDKitAlignment.so.1.2018.09.1 ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitForceField.so.1.2018.09.1 ../../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 77%] Built target testUFFForceFieldHelpers
make -f Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/DependInfo.cmake --color=
Scanning dependencies of target testMolAlign
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 77%] Building CXX object Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/testMolAlign.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLALIGN_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testMolAlign.dir/testMolAlign.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/testMolAlign.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:13:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Vector.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Matrix.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/SquareMatrix.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Transform3D.h:16,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/AlignMolecules.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/testMolAlign.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<double, double>}; _Tp = std::pair<double, double>; _Alloc = std::allocator<std::pair<double, double> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::pair<double, double> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<double, double>*, std::vector<std::pair<double, double> > >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair<double, double>}; _Tp = std::pair<double, double>; _Alloc = std::allocator<std::pair<double, double> >]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, double>*, std::vector<std::pair<double, double> > >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/set:60,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/SetQuery.h:13,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:29,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:13:
/usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDGeom::Point3D>; _KeyOfValue = std::_Select1st<std::pair<const int, RDGeom::Point3D> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:61,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:26,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:13:
/usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](std::map<_Key, _Tp, _Compare, _Alloc>::key_type&&) [with _Key = int; _Tp = RDGeom::Point3D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In function 'void testConstrainedEmbedding()':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:13:
/usr/include/c++/8/bits/vector.tcc: In function 'void testGithub568()':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:13:
/usr/include/c++/8/bits/stl_vector.h: In function 'void testTemp()':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:60,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp:10:
/usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDGeom::Point3D>; _KeyOfValue = std::_Select1st<std::pair<const int, RDGeom::Point3D> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Conformer.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:36,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/GraphMol.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp:17:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h: In function 'RDKit::INT_VECT RDKit::EmbedMultipleConfs(RDKit::ROMol&, unsigned int, unsigned int, int, bool, bool, double, bool, unsigned int, double, boost::python::dict&, double, bool, bool, int, bool, bool, bool)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:85:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
     x = other.x;
         ~~~~~~^
In file included from /usr/include/c++/8/map:61,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp:10:
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Conformer.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:36,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/GraphMol.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp:17:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h: In function 'int RDKit::EmbedMolecule(RDKit::ROMol&, unsigned int, int, bool, bool, double, bool, unsigned int, boost::python::dict&, double, bool, bool, bool, bool, bool)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:85:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
     x = other.x;
         ~~~~~~^
In file included from /usr/include/c++/8/map:61,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp:10:
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 78%] Linking CXX executable testDistGeomHelpers
[ 78%] Linking CXX shared module ../../../../rdkit/Chem/rdDistGeom.so
[ 78%] Linking CXX executable testMolAlign
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolAlign.dir/link.txt --verbose=1
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdDistGeom.dir/link.txt --verbose=1
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDistGeomHelpers.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testDistGeomHelpers.dir/testDgeomHelpers.cpp.o  -o testDistGeomHelpers ../../../lib/libRDKitDistGeomHelpers.so.1.2018.09.1 ../../../lib/libRDKitDistGeometry.so.1.2018.09.1 ../../../lib/libRDKitMolAlign.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitAlignment.so.1.2018.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../../lib/libRDKitForceField.so.1.2018.09.1 ../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdDistGeom.so CMakeFiles/rdDistGeom.dir/rdDistGeom.cpp.o ../../../../lib/libRDKitDistGeomHelpers.so.1.2018.09.1 ../../../../lib/libRDKitDistGeometry.so.1.2018.09.1 ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitMolAlign.so.1.2018.09.1 ../../../../lib/libRDKitAlignment.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitForceField.so.1.2018.09.1 ../../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testMolAlign.dir/testMolAlign.cpp.o  -o testMolAlign ../../../lib/libRDKitMolAlign.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitDistGeomHelpers.so.1.2018.09.1 ../../../lib/libRDKitDistGeometry.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitForceField.so.1.2018.09.1 ../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitAlignment.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 78%] Built target testMolAlign
[ 78%] Built target rdDistGeom
make -f Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build.make Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/depend
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/DependInfo.cmake --color=
make -f Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/depend
[ 78%] Built target testDistGeomHelpers
make -f Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build.make Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/DependInfo.cmake --color=
Scanning dependencies of target testFMCS
Scanning dependencies of target rdFMCS
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build.make Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 78%] Building CXX object Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/rdFMCS.cpp.o
[ 78%] Building CXX object Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/testFMCS_Unit.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testFMCS.dir/testFMCS_Unit.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/testFMCS_Unit.cpp
Scanning dependencies of target rdMolAlign
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build.make Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 78%] Building CXX object Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/rdMolAlign.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolAlign_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMolAlign.dir/rdMolAlign.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdFMCS_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdFMCS.dir/rdFMCS.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Wrap/rdFMCS.cpp
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp: In function 'RDKit::MolAlign::PyO3A* RDKit::MolAlign::getCrippenO3A(RDKit::ROMol&, RDKit::ROMol&, boost::python::list, boost::python::list, int, int, bool, unsigned int, unsigned int, boost::python::list, boost::python::list)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp:451:40: warning: comparison of integer expressions of different signedness: 'boost::python::ssize_t' {aka 'int'} and 'unsigned int' [-Wsign-compare]
       (python::len(prbCrippenContribs) == prbNAtoms)) {
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp:466:40: warning: comparison of integer expressions of different signedness: 'boost::python::ssize_t' {aka 'int'} and 'unsigned int' [-Wsign-compare]
       (python::len(refCrippenContribs) == refNAtoms)) {
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp: In function 'boost::python::tuple RDKit::MolAlign::getCrippenO3AForConfs(RDKit::ROMol&, RDKit::ROMol&, int, boost::python::list, boost::python::list, int, bool, unsigned int, unsigned int, boost::python::list, boost::python::list)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp:532:40: warning: comparison of integer expressions of different signedness: 'boost::python::ssize_t' {aka 'int'} and 'unsigned int' [-Wsign-compare]
       (python::len(prbCrippenContribs) == prbNAtoms)) {
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp:547:40: warning: comparison of integer expressions of different signedness: 'boost::python::ssize_t' {aka 'int'} and 'unsigned int' [-Wsign-compare]
       (python::len(refCrippenContribs) == refNAtoms)) {
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/testFMCS_Unit.cpp:48:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'void test504()':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'void test18()':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 78%] Linking CXX executable testFMCS
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFMCS.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testFMCS.dir/testFMCS_Unit.cpp.o  -o testFMCS ../../../lib/libRDKitFMCS.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lcoordgenlibs -lmaeparser -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 78%] Built target testFMCS
make -f Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/build.make Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Test /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/DependInfo.cmake --color=
Scanning dependencies of target FMCStest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/build.make Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 79%] Building CXX object Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/testFMCS.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/FMCStest.dir/testFMCS.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Test/testFMCS.cpp
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp:24:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h: In function 'RDNumeric::DoubleVector* RDKit::_translateWeights(boost::python::api::object)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       T res = python::extract<T>(d_seq[which]);
         ^~~
[ 79%] Linking CXX shared module ../../../../rdkit/Chem/rdFMCS.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdFMCS.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdFMCS.so CMakeFiles/rdFMCS.dir/rdFMCS.cpp.o ../../../../lib/libRDKitFMCS.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 79%] Built target rdFMCS
make -f Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolHash /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/DependInfo.cmake --color=
Scanning dependencies of target MolHash
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 80%] Building CXX object Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/MolHash.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/c++  -DMolHash_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLHASH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolHash.dir/MolHash.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolHash/MolHash.cpp
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Test/testFMCS.cpp: In function 'std::__cxx11::string testChEMBL_Txt(const char*, double, const char*)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Test/testFMCS.cpp:501:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type' {aka 'unsigned int'} [-Wformat=]
   fprintf(fres, "%s;%lu;%.1f;%.4f;%u;%u;%s;", test, mols.size(), th, sec,
                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~        ~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Test/testFMCS.cpp: In function 'void testFileSDF_RandomSet_SMI(const char*, const char*)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Test/testFMCS.cpp:1172:21: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type' {aka 'unsigned int'} [-Wformat=]
       fprintf(fcsv, "%u;%lu;%s;%.3f;%u;%u;%s;", n, mols.size(),
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~     ~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Test/testFMCS.cpp:1184:21: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type' {aka 'unsigned int'} [-Wformat=]
       fprintf(fcsv, "%u;%lu;%s;%.3f;%u;%u;%s\n", n, mols.size(),
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~     ~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Test/testFMCS.cpp: In function 'void testFileSDF_RandomSet(const char*, const char*)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Test/testFMCS.cpp:1279:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type' {aka 'unsigned int'} [-Wformat=]
         fprintf(fcsv, "%u;%lu;%s;%.5f;%u;%u;%s;", n, mols.size(),
                       ^~~~~~~~~~~~~~~~~~~~~~~~~~     ~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Test/testFMCS.cpp:1328:21: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type' {aka 'unsigned int'} [-Wformat=]
       fprintf(fcsv, "%u;%lu;%s;%.5f;%u;%u;%s;", n, mols.size(),
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~     ~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Test/testFMCS.cpp:1408:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type' {aka 'unsigned int'} [-Wformat=]
         fprintf(fcsv, "%u;%lu;%s;%.5f;%u;%u;%s;", n, mols.size(),
                       ^~~~~~~~~~~~~~~~~~~~~~~~~~     ~~~~~~~~~~~
[ 80%] Linking CXX shared module ../../../../rdkit/Chem/rdMolAlign.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolAlign.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdMolAlign.so CMakeFiles/rdMolAlign.dir/rdMolAlign.cpp.o ../../../../lib/libRDKitMolAlign.so.1.2018.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../../../lib/libRDKitForceField.so.1.2018.09.1 ../../../../lib/libRDKitAlignment.so.1.2018.09.1 ../../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 80%] Built target rdMolAlign
make -f Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MMPA /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/DependInfo.cmake --color=
Scanning dependencies of target testMMPA
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 80%] Building CXX object Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/MMPA_UnitTest.cpp.o
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Test/../../RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Test/testFMCS.cpp:48:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MMPA_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testMMPA.dir/MMPA_UnitTest.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MMPA/MMPA_UnitTest.cpp
/usr/include/c++/8/bits/vector.tcc: In function 'void test504()':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 80%] Linking CXX executable FMCStest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test && /usr/bin/cmake -E cmake_link_script CMakeFiles/FMCStest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/FMCStest.dir/testFMCS.cpp.o  -o FMCStest ../../../../lib/libRDKitFMCS.so.1.2018.09.1 ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lcoordgenlibs -lmaeparser -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 80%] Built target FMCStest
[ 80%] Building CXX object Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/HashToString.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/c++  -DMolHash_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLHASH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolHash.dir/HashToString.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolHash/HashToString.cpp
make -f Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build.make Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MMPA/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMMPA
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build.make Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 81%] Building CXX object Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/rdMMPA.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMMPA_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMMPA.dir/rdMMPA.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MMPA/Wrap/rdMMPA.cpp
[ 81%] Linking CXX executable testMMPA
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMMPA.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testMMPA.dir/MMPA_UnitTest.cpp.o  -o testMMPA ../../../lib/libRDKitMMPA.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lcoordgenlibs -lmaeparser -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 81%] Built target testMMPA
make -f Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/build.make Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/DependInfo.cmake --color=
Scanning dependencies of target StructChecker
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/build.make Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 81%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/StructChecker.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/StructChecker.dir/StructChecker.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/StructChecker.cpp
[ 81%] Linking CXX shared library ../../../lib/libRDKitMolHash.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolHash.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitMolHash.so.1 -o ../../../lib/libRDKitMolHash.so.1.2018.09.1 CMakeFiles/MolHash.dir/MolHash.cpp.o CMakeFiles/MolHash.dir/HashToString.cpp.o ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolHash.so.1.2018.09.1 ../../../lib/libRDKitMolHash.so.1 ../../../lib/libRDKitMolHash.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 81%] Built target MolHash
[ 81%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/StructCheckerOptions.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/StructChecker.dir/StructCheckerOptions.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/StructCheckerOptions.cpp
make -f Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RGroupDecomposition /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/DependInfo.cmake --color=
Scanning dependencies of target RGroupDecomposition
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 81%] Building CXX object Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupDecomp.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_RGROUPDECOMPOSITION_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DRGroupDecomposition_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/RGroupDecomposition.dir/RGroupDecomp.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RGroupDecomposition/RGroupDecomp.cpp
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/StructCheckerOptions.cpp: In function 'bool RDKit::StructureCheck::ReadAAPairs(const string&, std::vector<std::pair<RDKit::StructureCheck::AugmentedAtom, RDKit::StructureCheck::AugmentedAtom> >&)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/StructCheckerOptions.cpp:354:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
   fscanf(fp, "%d", &n);
   ~~~~~~^~~~~~~~~~~~~~
[ 81%] Linking CXX shared module ../../../../rdkit/Chem/rdMMPA.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMMPA.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdMMPA.so CMakeFiles/rdMMPA.dir/rdMMPA.cpp.o ../../../../lib/libRDKitMMPA.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 81%] Built target rdMMPA
[ 81%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/StructureFlags.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/StructChecker.dir/StructureFlags.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/StructureFlags.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RGroupDecomposition/../RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RGroupDecomposition/RGroupDecomp.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RGroupDecomposition/RGroupDecomp.cpp:31:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
make -f Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/build.make Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/MMFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/DependInfo.cmake --color=
Scanning dependencies of target testMMFFForceField
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/build.make Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 82%] Building CXX object Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/testMMFFForceField.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/MMFF && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testMMFFForceField.dir/testMMFFForceField.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/testMMFFForceField.cpp
[ 83%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/Utilites.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/StructChecker.dir/Utilites.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/Utilites.cpp
[ 83%] Linking CXX shared library ../../../lib/libRDKitRGroupDecomposition.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/cmake -E cmake_link_script CMakeFiles/RGroupDecomposition.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitRGroupDecomposition.so.1 -o ../../../lib/libRDKitRGroupDecomposition.so.1.2018.09.1 CMakeFiles/RGroupDecomposition.dir/RGroupDecomp.cpp.o ../../../lib/libRDKitFMCS.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitRGroupDecomposition.so.1.2018.09.1 ../../../lib/libRDKitRGroupDecomposition.so.1 ../../../lib/libRDKitRGroupDecomposition.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 83%] Built target RGroupDecomposition
[ 83%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/Pattern.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/StructChecker.dir/Pattern.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/Pattern.cpp
[ 83%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/Stereo.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/StructChecker.dir/Stereo.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/Stereo.cpp
make -f Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/DependInfo.cmake --color=
Scanning dependencies of target ChemReactions
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 84%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/Reaction.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ChemReactions.dir/Reaction.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Reaction.cpp
[ 84%] Linking CXX executable testMMFFForceField
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/MMFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMMFFForceField.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testMMFFForceField.dir/testMMFFForceField.cpp.o  -o testMMFFForceField ../../../lib/libRDKitDistGeomHelpers.so.1.2018.09.1 ../../../lib/libRDKitDistGeometry.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitMolAlign.so.1.2018.09.1 ../../../lib/libRDKitAlignment.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../../lib/libRDKitForceField.so.1.2018.09.1 ../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 84%] Built target testMMFFForceField
[ 84%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/AtomSymbolMatch.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/StructChecker.dir/AtomSymbolMatch.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/AtomSymbolMatch.cpp
[ 84%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/StripSmallFragments.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/StructChecker.dir/StripSmallFragments.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/StripSmallFragments.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Reaction.h:37,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Reaction.cpp:33:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
make -f Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/DependInfo.cmake --color=
Scanning dependencies of target testDescriptors
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 84%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/test.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testDescriptors.dir/test.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/test.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/../MolOps.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/StripSmallFragments.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 84%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/MDLParser.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ChemReactions.dir/MDLParser.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/MDLParser.cpp
[ 84%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/ReCharge.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/StructChecker.dir/ReCharge.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/ReCharge.cpp
[ 85%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/Tautomer.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/StructChecker.dir/Tautomer.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/Tautomer.cpp
[ 85%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/DaylightParser.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ChemReactions.dir/DaylightParser.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/DaylightParser.cpp
[ 85%] Linking CXX shared library ../../../lib/libRDKitStructChecker.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/cmake -E cmake_link_script CMakeFiles/StructChecker.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitStructChecker.so.1 -o ../../../lib/libRDKitStructChecker.so.1.2018.09.1 CMakeFiles/StructChecker.dir/StructChecker.cpp.o CMakeFiles/StructChecker.dir/StructCheckerOptions.cpp.o CMakeFiles/StructChecker.dir/StructureFlags.cpp.o CMakeFiles/StructChecker.dir/Utilites.cpp.o CMakeFiles/StructChecker.dir/Pattern.cpp.o CMakeFiles/StructChecker.dir/Stereo.cpp.o CMakeFiles/StructChecker.dir/AtomSymbolMatch.cpp.o CMakeFiles/StructChecker.dir/StripSmallFragments.cpp.o CMakeFiles/StructChecker.dir/ReCharge.cpp.o CMakeFiles/StructChecker.dir/Tautomer.cpp.o ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitStructChecker.so.1.2018.09.1 ../../../lib/libRDKitStructChecker.so.1 ../../../lib/libRDKitStructChecker.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 85%] Built target StructChecker
make -f Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/DependInfo.cmake --color=
Scanning dependencies of target testAUTOCORR2D
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 85%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/testAUTOCORR2D.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testAUTOCORR2D.dir/testAUTOCORR2D.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/testAUTOCORR2D.cpp
[ 85%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionPickler.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ChemReactions.dir/ReactionPickler.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionPickler.cpp
[ 85%] Linking CXX executable testAUTOCORR2D
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/testAUTOCORR2D.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testAUTOCORR2D.dir/testAUTOCORR2D.cpp.o  -o testAUTOCORR2D ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lcoordgenlibs -lmaeparser -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 85%] Built target testAUTOCORR2D
make -f Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build.make Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMolDescriptors
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build.make Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 85%] Building CXX object Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/rdMolDescriptors.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolDescriptors_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMolDescriptors.dir/rdMolDescriptors.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Wrap/rdMolDescriptors.cpp
[ 85%] Linking CXX shared module ../../../../rdkit/Chem/rdfiltercatalog.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdfiltercatalog.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdfiltercatalog.so CMakeFiles/rdfiltercatalog.dir/rdfiltercatalog.cpp.o CMakeFiles/rdfiltercatalog.dir/FilterCatalog.cpp.o ../../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 85%] Built target rdfiltercatalog
[ 85%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionWriter.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ChemReactions.dir/ReactionWriter.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionWriter.cpp
[ 85%] Linking CXX executable testDescriptors
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDescriptors.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testDescriptors.dir/test.cpp.o  -o testDescriptors ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 85%] Built target testDescriptors
make -f Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolHash /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/DependInfo.cmake --color=
Scanning dependencies of target testMolHash
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 85%] Building CXX object Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/testMolHash.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLHASH_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testMolHash.dir/testMolHash.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolHash/testMolHash.cpp
[ 85%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionDepict.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ChemReactions.dir/ReactionDepict.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionDepict.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Reaction.h:37,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionWriter.cpp:33:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'void {anonymous}::setRXNRoleOfAllMoleculeAtoms(RDKit::ROMol&, int)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 86%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionFingerprints.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ChemReactions.dir/ReactionFingerprints.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionFingerprints.cpp
[ 86%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionUtils.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ChemReactions.dir/ReactionUtils.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionUtils.cpp
[ 86%] Linking CXX executable testMolHash
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolHash.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testMolHash.dir/testMolHash.cpp.o  -o testMolHash ../../../lib/libRDKitMolHash.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lcoordgenlibs -lmaeparser -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 86%] Built target testMolHash
make -f Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build.make Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolHash/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMolHash
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build.make Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 86%] Building CXX object Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/rdMolHash.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolHash_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMolHash.dir/rdMolHash.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolHash/Wrap/rdMolHash.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Reaction.h:37,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionUtils.cpp:34:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 86%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/MoleculeParser.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ChemReactions.dir/MoleculeParser.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/MoleculeParser.cpp
[ 86%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionRunner.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ChemReactions.dir/ReactionRunner.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionRunner.cpp
[ 86%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/PreprocessRxn.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ChemReactions.dir/PreprocessRxn.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/PreprocessRxn.cpp
[ 87%] Linking CXX shared module ../../../../rdkit/Chem/rdMolHash.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolHash.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdMolHash.so CMakeFiles/rdMolHash.dir/rdMolHash.cpp.o ../../../../lib/libRDKitMolHash.so.1.2018.09.1 ../../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Conformer.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:36,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/GraphMol.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Wrap/rdMolDescriptors.cpp:12:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h: In function 'boost::python::list {anonymous}::GetUSRDistributionsFromPoints(boost::python::api::object, boost::python::api::object)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:85:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
     x = other.x;
         ~~~~~~^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:86:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::y' may be used uninitialized in this function [-Wmaybe-uninitialized]
     y = other.y;
         ~~~~~~^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:87:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::z' may be used uninitialized in this function [-Wmaybe-uninitialized]
     z = other.z;
         ~~~~~~^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h: In function 'boost::python::list {anonymous}::GetUSRDistributions(boost::python::api::object, boost::python::api::object)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:85:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
     x = other.x;
         ~~~~~~^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:86:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::y' may be used uninitialized in this function [-Wmaybe-uninitialized]
     y = other.y;
         ~~~~~~^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:87:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::z' may be used uninitialized in this function [-Wmaybe-uninitialized]
     z = other.z;
         ~~~~~~^
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 87%] Built target rdMolHash
make -f Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/build.make Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/DependInfo.cmake --color=
Scanning dependencies of target testStructChecker
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/build.make Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 87%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/testStructChecker.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testStructChecker.dir/testStructChecker.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/testStructChecker.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Reaction.h:37,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionRunner.cpp:33:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Reaction.h:37,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionRunner.cpp:33:
/usr/include/c++/8/bits/stl_vector.h: In function 'void RDKit::ReactionRunnerUtils::generateProductConformers(RDKit::Conformer*, const RDKit::ROMol&, RDKit::ReactionRunnerUtils::ReactantProductAtomMapping*)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Reaction.h:37,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionRunner.cpp:33:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 87%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/SanitizeRxn.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ChemReactions.dir/SanitizeRxn.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/SanitizeRxn.cpp
make -f Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/build.make Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/DependInfo.cmake --color=
Scanning dependencies of target rdStructChecker
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/build.make Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 87%] Building CXX object Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/structchecker.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdStructChecker_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdStructChecker.dir/structchecker.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/Wrap/structchecker.cpp
[ 87%] Linking CXX executable testStructChecker
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/cmake -E cmake_link_script CMakeFiles/testStructChecker.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testStructChecker.dir/testStructChecker.cpp.o  -o testStructChecker ../../../lib/libRDKitStructChecker.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 87%] Built target testStructChecker
make -f Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RGroupDecomposition /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/DependInfo.cmake --color=
Scanning dependencies of target testRGroupDecomp
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 87%] Building CXX object Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/testRGroupDecomp.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_RGROUPDECOMPOSITION_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testRGroupDecomp.dir/testRGroupDecomp.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RGroupDecomposition/testRGroupDecomp.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Reaction.h:37,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/SanitizeRxn.h:36,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/SanitizeRxn.cpp:32:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 87%] Linking CXX shared module ../../../../rdkit/Chem/rdStructChecker.so
[ 87%] Linking CXX executable testRGroupDecomp
[ 88%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/Enumerate/Enumerate.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/cmake -E cmake_link_script CMakeFiles/testRGroupDecomp.dir/link.txt --verbose=1
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ChemReactions.dir/Enumerate/Enumerate.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/Enumerate.cpp
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdStructChecker.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testRGroupDecomp.dir/testRGroupDecomp.cpp.o  -o testRGroupDecomp ../../../lib/libRDKitRGroupDecomposition.so.1.2018.09.1 ../../../lib/libRDKitFMCS.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lcoordgenlibs -lmaeparser -lpthread 
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdStructChecker.so CMakeFiles/rdStructChecker.dir/structchecker.cpp.o ../../../../lib/libRDKitStructChecker.so.1.2018.09.1 ../../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 88%] Built target testRGroupDecomp
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 88%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/Enumerate/EnumerationPickler.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ChemReactions.dir/Enumerate/EnumerationPickler.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/EnumerationPickler.cpp
[ 88%] Built target rdStructChecker
[ 88%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/Enumerate/EvenSamplePairs.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ChemReactions.dir/Enumerate/EvenSamplePairs.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/EvenSamplePairs.cpp
[ 88%] Linking CXX shared module ../../../../rdkit/Chem/rdMolDescriptors.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolDescriptors.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdMolDescriptors.so CMakeFiles/rdMolDescriptors.dir/rdMolDescriptors.cpp.o ../../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 88%] Built target rdMolDescriptors
make -f Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RGroupDecomposition/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/DependInfo.cmake --color=
Scanning dependencies of target rdRGroupDecomposition
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 88%] Building CXX object Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/rdRGroupComposition.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdRGroupDecomposition_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdRGroupDecomposition.dir/rdRGroupComposition.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RGroupDecomposition/Wrap/rdRGroupComposition.cpp
[ 88%] Linking CXX shared module ../../../../rdkit/Chem/rdRGroupDecomposition.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdRGroupDecomposition.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdRGroupDecomposition.so CMakeFiles/rdRGroupDecomposition.dir/rdRGroupComposition.cpp.o ../../../../lib/libRDKitRGroupDecomposition.so.1.2018.09.1 ../../../../lib/libRDKitFMCS.so.1.2018.09.1 ../../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 88%] Built target rdRGroupDecomposition
[ 88%] Linking CXX shared library ../../../lib/libRDKitChemReactions.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_link_script CMakeFiles/ChemReactions.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitChemReactions.so.1 -o ../../../lib/libRDKitChemReactions.so.1.2018.09.1 CMakeFiles/ChemReactions.dir/Reaction.cpp.o CMakeFiles/ChemReactions.dir/MDLParser.cpp.o CMakeFiles/ChemReactions.dir/DaylightParser.cpp.o CMakeFiles/ChemReactions.dir/ReactionPickler.cpp.o CMakeFiles/ChemReactions.dir/ReactionWriter.cpp.o CMakeFiles/ChemReactions.dir/ReactionDepict.cpp.o CMakeFiles/ChemReactions.dir/ReactionFingerprints.cpp.o CMakeFiles/ChemReactions.dir/ReactionUtils.cpp.o CMakeFiles/ChemReactions.dir/MoleculeParser.cpp.o CMakeFiles/ChemReactions.dir/ReactionRunner.cpp.o CMakeFiles/ChemReactions.dir/PreprocessRxn.cpp.o CMakeFiles/ChemReactions.dir/SanitizeRxn.cpp.o CMakeFiles/ChemReactions.dir/Enumerate/Enumerate.cpp.o CMakeFiles/ChemReactions.dir/Enumerate/EnumerationPickler.cpp.o CMakeFiles/ChemReactions.dir/Enumerate/EvenSamplePairs.cpp.o ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lcoordgenlibs -lmaeparser -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../lib/libRDKitChemReactions.so.1 ../../../lib/libRDKitChemReactions.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 88%] Built target ChemReactions
make -f Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/depend
make -f Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/depend
make -f Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/depend
make -f Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/DependInfo.cmake --color=
Scanning dependencies of target rxnTestCatch
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build
Scanning dependencies of target testEnumeration
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
Scanning dependencies of target testReaction
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 88%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/catch_tests.cpp.o
[ 89%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/Enumerate/testEnumerate.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/rxnTestCatch.dir/catch_tests.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/catch_tests.cpp
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testEnumeration.dir/Enumerate/testEnumerate.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/testEnumerate.cpp
[ 89%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/testReaction.cpp.o
Scanning dependencies of target testReactionFingerprints
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testReaction.dir/testReaction.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/testReaction.cpp
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 89%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/testReactionFingerprints.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testReactionFingerprints.dir/testReactionFingerprints.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/testReactionFingerprints.cpp
[ 89%] Linking CXX executable testReactionFingerprints
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_link_script CMakeFiles/testReactionFingerprints.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testReactionFingerprints.dir/testReactionFingerprints.cpp.o  -o testReactionFingerprints ../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 89%] Built target testReactionFingerprints
make -f Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build.make Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/DependInfo.cmake --color=
Scanning dependencies of target rdChemReactions
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build.make Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 89%] Building CXX object Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/Enumerate.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdChemReactions_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdChemReactions.dir/Enumerate.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp
[ 89%] Linking CXX executable testEnumeration
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_link_script CMakeFiles/testEnumeration.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testEnumeration.dir/Enumerate/testEnumerate.cpp.o  -o testEnumeration ../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 89%] Built target testEnumeration
make -f Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DependInfo.cmake --color=
Scanning dependencies of target MolDraw2D
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 89%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2D.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++  -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolDraw2D.dir/MolDraw2D.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2D.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/testReaction.cpp:34:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/testReaction.cpp:34:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/testReaction.cpp:34:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/QueryOps.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:14:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/QueryOps.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:14:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/QueryOps.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:14:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDGeom::Point2D&}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point2D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include/catch.hpp:465,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/catch_tests.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include/catch.hpp:465,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/catch_tests.cpp:12:
/usr/include/c++/8/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/QueryOps.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:14:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void RDKit::MolDraw2D::extractAtomCoords(const RDKit::ROMol&, int, bool)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In member function 'virtual void RDKit::MolDraw2D::drawReaction(const RDKit::ChemicalReaction&, bool, const std::vector<boost::tuples::tuple<float, float, float> >*, const std::vector<int>*)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/8/bits/stl_vector.h: In static member function 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_append(Container&, boost::python::api::object) [with Container = std::vector<long long unsigned int>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>]':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In function 'void boost::python::container_utils::extend_container(Container&, boost::python::api::object) [with Container = std::vector<long long unsigned int>]':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/8/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/8/bits/vector.tcc:172:5: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:172:5: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/8/bits/stl_vector.h: In static member function 'static void boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_delete_item(Container&, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>; bool NoProxy = false; bool NoSlice = false; Data = long long unsigned int; Index = unsigned int; Key = long long unsigned int]':
/usr/include/c++/8/bits/stl_vector.h:1348:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
                                                                       ^
In file included from /usr/include/c++/8/algorithm:62,
                 from /usr/include/boost/function/detail/prologue.hpp:13,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/8/bits/stl_algo.h: In function '_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const long long unsigned int>]':
/usr/include/c++/8/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
     __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last,
     ^~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h: In static member function 'static bool boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_contains(Container&, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>; bool NoProxy = false; bool NoSlice = false; Data = long long unsigned int; Index = unsigned int; Key = long long unsigned int]':
/usr/include/c++/8/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
       return __find_if(__first, __last, __pred,
              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
          std::__iterator_category(__first));
          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
       return __find_if(__first, __last, __pred,
              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
          std::__iterator_category(__first));
          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/8/bits/stl_vector.h: In static member function 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_extend(Container&, boost::python::api::object) [with Container = std::vector<long long unsigned int>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>]':
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
    _M_range_insert(__pos, __first, __last,
    ^~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_vector.h: In static member function 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<long long unsigned int>, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>, boost::python::detail::container_element<std::vector<long long unsigned int>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false> >, unsigned int>; Data = long long unsigned int; Index = unsigned int]':
/usr/include/c++/8/bits/stl_vector.h:1348:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
                                                                       ^
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/8/bits/vector.tcc:149:2: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  _M_realloc_insert(begin() + (__position - cbegin()), __x);
  ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/8/bits/stl_vector.h:1348:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
                                                                       ^
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/8/bits/vector.tcc:149:2: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  _M_realloc_insert(begin() + (__position - cbegin()), __x);
  ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
    _M_range_insert(__pos, __first, __last,
    ^~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_vector.h:1348:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
                                                                       ^
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
    _M_range_insert(__pos, __first, __last,
    ^~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
In file included from /usr/include/boost/python/suite/indexing/indexing_suite.hpp:12,
                 from /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:9,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap.h:24,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:32:
/usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:689:9: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
         }
         ^
/usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:689:9: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
/usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:689:9: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
/usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:689:9: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
[ 89%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2DSVG.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++  -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolDraw2D.dir/MolDraw2DSVG.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2DSVG.cpp
[ 89%] Building CXX object Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/rdChemReactions.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdChemReactions_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdChemReactions.dir/rdChemReactions.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp
[ 89%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2DDetails.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++  -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolDraw2D.dir/MolDraw2DDetails.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2DDetails.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2DDetails.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2DDetails.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDGeom::Point2D&}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point2D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2DDetails.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2DDetails.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In function 'void RDKit::MolDraw2D_detail::arcPoints(const RDGeom::Point2D&, const RDGeom::Point2D&, std::vector<RDGeom::Point2D>&, float, float)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
[ 89%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2DUtils.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++  -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolDraw2D.dir/MolDraw2DUtils.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2DUtils.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:16,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolPickler.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp:32:
/usr/include/c++/8/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:159:5: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:159:5: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:16,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolPickler.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp:32:
/usr/include/c++/8/bits/stl_vector.h: In function 'void RDKit::MolClearComputedProps(const RDOb&) [with RDOb = RDKit::ChemicalReaction]':
/usr/include/c++/8/bits/stl_vector.h:1318:58: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
       { return _M_erase(begin() + (__position - cbegin())); }
                                                          ^
/usr/include/c++/8/bits/stl_vector.h: In function 'void RDKit::MolClearProp(const RDOb&, const char*) [with RDOb = RDKit::ChemicalReaction]':
/usr/include/c++/8/bits/stl_vector.h:1318:58: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
       { return _M_erase(begin() + (__position - cbegin())); }
                                                          ^
[ 90%] Linking CXX shared library ../../../lib/libRDKitMolDraw2D.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolDraw2D.dir/link.txt --verbose=1
[ 90%] Linking CXX shared module ../../../../rdkit/Chem/rdChemReactions.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdChemReactions.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitMolDraw2D.so.1 -o ../../../lib/libRDKitMolDraw2D.so.1.2018.09.1 CMakeFiles/MolDraw2D.dir/MolDraw2D.cpp.o CMakeFiles/MolDraw2D.dir/MolDraw2DSVG.cpp.o CMakeFiles/MolDraw2D.dir/MolDraw2DDetails.cpp.o CMakeFiles/MolDraw2D.dir/MolDraw2DUtils.cpp.o ../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lcoordgenlibs -lmaeparser -lpthread -lboost_serialization 
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdChemReactions.so CMakeFiles/rdChemReactions.dir/Enumerate.cpp.o CMakeFiles/rdChemReactions.dir/rdChemReactions.cpp.o ../../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolDraw2D.so.1.2018.09.1 ../../../lib/libRDKitMolDraw2D.so.1 ../../../lib/libRDKitMolDraw2D.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 90%] Built target MolDraw2D
make -f Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/depend
[ 90%] Built target rdChemReactions
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/DependInfo.cmake --color=
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/DependInfo.cmake --color=
Scanning dependencies of target moldraw2DTest1
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 90%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/test1.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/moldraw2DTest1.dir/test1.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/test1.cpp
Scanning dependencies of target MolStandardize
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 91%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/MolStandardize.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/MolStandardize.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/MolStandardize.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/test1.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
[ 91%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Metal.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/Metal.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Metal.cpp
/usr/include/c++/8/bits/vector.tcc: In function 'void testGithub1322()':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:60,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/test1.cpp:12:
/usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, double> >'} changed in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 91%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Normalize.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/Normalize.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Normalize.cpp
In file included from /usr/include/c++/8/map:61,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/test1.cpp:12:
/usr/include/c++/8/bits/stl_map.h: In function 'void test3()':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, double> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, double> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 92%] Linking CXX executable moldraw2DTest1
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/cmake -E cmake_link_script CMakeFiles/moldraw2DTest1.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/moldraw2DTest1.dir/test1.cpp.o  -o moldraw2DTest1 ../../../lib/libRDKitMolDraw2D.so.1.2018.09.1 ../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 92%] Built target moldraw2DTest1
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/DependInfo.cmake --color=
Scanning dependencies of target moldraw2DRxnTest1
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 92%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/rxn_test1.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/moldraw2DRxnTest1.dir/rxn_test1.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/rxn_test1.cpp
[ 92%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Validate.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/Validate.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Validate.cpp
[ 92%] Linking CXX executable moldraw2DRxnTest1
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/cmake -E cmake_link_script CMakeFiles/moldraw2DRxnTest1.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/moldraw2DRxnTest1.dir/rxn_test1.cpp.o  -o moldraw2DRxnTest1 ../../../lib/libRDKitMolDraw2D.so.1.2018.09.1 ../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 92%] Built target moldraw2DRxnTest1
make -f Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMolDraw2D
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 92%] Building CXX object Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/rdMolDraw2D.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolDraw2D_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMolDraw2D.dir/rdMolDraw2D.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp
[ 92%] Linking CXX executable rxnTestCatch
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_link_script CMakeFiles/rxnTestCatch.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/rxnTestCatch.dir/catch_tests.cpp.o  -o rxnTestCatch ../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 92%] Built target rxnTestCatch
make -f Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/DependInfo.cmake --color=
Scanning dependencies of target rdmolops
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 92%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/rdmolops.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolops_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdmolops.dir/rdmolops.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/rdmolops.cpp
[ 92%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Charge.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/Charge.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Charge.cpp
[ 92%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/MolOps.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolops_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdmolops.dir/MolOps.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/MolOps.cpp
[ 92%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Tautomer.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/Tautomer.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Tautomer.cpp
In file included from /usr/include/c++/8/map:60,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:11:
/usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const int&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, double> >'} changed in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp: In function 'void RDKit::{anonymous}::pyDictToDoubleMap(boost::python::api::object, std::map<int, double>&)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:54:57: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
     double r = python::extract<double>(tDict.values()[i]);
                                                         ^
In file included from /usr/include/c++/8/map:61,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:11:
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, double> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 93%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Fragment.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/Fragment.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Fragment.cpp
[ 93%] Linking CXX shared module ../../../../rdkit/Chem/Draw/rdMolDraw2D.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolDraw2D.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/Draw/rdMolDraw2D.so CMakeFiles/rdMolDraw2D.dir/rdMolDraw2D.cpp.o ../../../../lib/libRDKitMolDraw2D.so.1.2018.09.1 ../../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lboost_serialization 
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/MolOps.cpp:30:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:336:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       result = off_type(bp::extract<off_type>(py_tell()));
                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:185:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       off_type py_pos = bp::extract<off_type>(py_tell());
                                                        ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:155:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
         off_type py_pos = bp::extract<off_type>(py_tell());
                                                          ^
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 93%] Built target rdMolDraw2D
[ 93%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogEntry.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogEntry.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogEntry.cpp
[ 93%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogParams.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogParams.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogParams.cpp
[ 93%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogUtils.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogUtils.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.cpp
[ 93%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogEntry.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogEntry.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogEntry.cpp
[ 93%] Linking CXX shared module ../../../rdkit/Chem/rdmolops.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdmolops.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../rdkit/Chem/rdmolops.so CMakeFiles/rdmolops.dir/rdmolops.cpp.o CMakeFiles/rdmolops.dir/MolOps.cpp.o ../../../lib/libRDKitMolDraw2D.so.1.2018.09.1 ../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lboost_serialization 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 93%] Built target rdmolops
[ 93%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogParams.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogParams.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogParams.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'std::vector<std::shared_ptr<RDKit::ROMol> > RDKit::MolStandardize::readFuncGroups(std::istream&, int)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 94%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogUtils.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogUtils.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.cpp
[ 94%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogEntry.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogEntry.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogEntry.cpp
[ 94%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogParams.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogParams.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogParams.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
[ 94%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogUtils.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogUtils.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.cpp
/usr/include/c++/8/bits/vector.tcc: In function 'std::vector<std::pair<boost::shared_ptr<RDKit::ROMol>, boost::shared_ptr<RDKit::ROMol> > > RDKit::MolStandardize::readPairs(std::istream&, int)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 94%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogEntry.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogEntry.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogEntry.cpp
[ 94%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogParams.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogParams.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogParams.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'std::vector<std::shared_ptr<RDKit::ChemicalReaction> > RDKit::MolStandardize::readTransformations(std::istream&, int)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 95%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogUtils.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogUtils.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'RDKit::MolStandardize::TautomerTransform* RDKit::{anonymous}::getTautomer(const string&)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 95%] Linking CXX shared library ../../../lib/libRDKitMolStandardize.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolStandardize.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitMolStandardize.so.1 -o ../../../lib/libRDKitMolStandardize.so.1.2018.09.1 CMakeFiles/MolStandardize.dir/MolStandardize.cpp.o CMakeFiles/MolStandardize.dir/Metal.cpp.o CMakeFiles/MolStandardize.dir/Normalize.cpp.o CMakeFiles/MolStandardize.dir/Validate.cpp.o CMakeFiles/MolStandardize.dir/Charge.cpp.o CMakeFiles/MolStandardize.dir/Tautomer.cpp.o CMakeFiles/MolStandardize.dir/Fragment.cpp.o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogEntry.cpp.o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogParams.cpp.o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogUtils.cpp.o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogEntry.cpp.o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogParams.cpp.o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogUtils.cpp.o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogEntry.cpp.o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogParams.cpp.o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogUtils.cpp.o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogEntry.cpp.o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogParams.cpp.o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogUtils.cpp.o ../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lcoordgenlibs -lmaeparser -lpthread -lboost_serialization 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolStandardize.so.1.2018.09.1 ../../../lib/libRDKitMolStandardize.so.1 ../../../lib/libRDKitMolStandardize.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 95%] Built target MolStandardize
make -f Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/depend
make -f Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/DependInfo.cmake --color=
make -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/DependInfo.cmake --color=
Scanning dependencies of target molValidateTest
Scanning dependencies of target molStandardizeTest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
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make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
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Scanning dependencies of target molNormalizeTest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 95%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/testValidate.cpp.o
[ 95%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/test1.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/molValidateTest.dir/testValidate.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/testValidate.cpp
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/molStandardizeTest.dir/test1.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/test1.cpp
[ 95%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/testNormalize.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/molNormalizeTest.dir/testNormalize.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/testNormalize.cpp
[ 96%] Linking CXX executable molNormalizeTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molNormalizeTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/molNormalizeTest.dir/testNormalize.cpp.o  -o molNormalizeTest ../../../lib/libRDKitMolStandardize.so.1.2018.09.1 ../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lcoordgenlibs -lmaeparser -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 96%] Built target molNormalizeTest
make -f Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/DependInfo.cmake --color=
Scanning dependencies of target molChargeTest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 96%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/testCharge.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/molChargeTest.dir/testCharge.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/testCharge.cpp
[ 96%] Linking CXX executable molValidateTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molValidateTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/molValidateTest.dir/testValidate.cpp.o  -o molValidateTest ../../../lib/libRDKitMolStandardize.so.1.2018.09.1 ../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lcoordgenlibs -lmaeparser -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 96%] Built target molValidateTest
make -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/DependInfo.cmake --color=
Scanning dependencies of target molStandardizeSmallTest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 96%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/test2.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/molStandardizeSmallTest.dir/test2.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/test2.cpp
[ 96%] Linking CXX executable molStandardizeTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molStandardizeTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/molStandardizeTest.dir/test1.cpp.o  -o molStandardizeTest ../../../lib/libRDKitMolStandardize.so.1.2018.09.1 ../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lcoordgenlibs -lmaeparser -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 96%] Built target molStandardizeTest
make -f Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/DependInfo.cmake --color=
Scanning dependencies of target molTautomerTest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 96%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/testTautomer.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/molTautomerTest.dir/testTautomer.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/testTautomer.cpp
[ 97%] Linking CXX executable molChargeTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molChargeTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/molChargeTest.dir/testCharge.cpp.o  -o molChargeTest ../../../lib/libRDKitMolStandardize.so.1.2018.09.1 ../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lcoordgenlibs -lmaeparser -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 97%] Built target molChargeTest
make -f Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/DependInfo.cmake --color=
Scanning dependencies of target molFragmentTest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 97%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/testFragment.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/molFragmentTest.dir/testFragment.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/testFragment.cpp
[ 98%] Linking CXX executable testReaction
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_link_script CMakeFiles/testReaction.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testReaction.dir/testReaction.cpp.o  -o testReaction ../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lcoordgenlibs -lmaeparser 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 98%] Built target testReaction
make -f Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/build.make Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMolStandardize
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make -f Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/build.make Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 98%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/rdMolStandardize.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMolStandardize.dir/rdMolStandardize.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Wrap/rdMolStandardize.cpp
[ 98%] Linking CXX executable molStandardizeSmallTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molStandardizeSmallTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/molStandardizeSmallTest.dir/test2.cpp.o  -o molStandardizeSmallTest ../../../lib/libRDKitMolStandardize.so.1.2018.09.1 ../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lcoordgenlibs -lmaeparser -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 98%] Built target molStandardizeSmallTest
[ 98%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Validate.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMolStandardize.dir/Validate.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Wrap/Validate.cpp
[ 98%] Linking CXX executable molFragmentTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molFragmentTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/molFragmentTest.dir/testFragment.cpp.o  -o molFragmentTest ../../../lib/libRDKitMolStandardize.so.1.2018.09.1 ../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lboost_serialization 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 98%] Built target molFragmentTest
[ 98%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Charge.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMolStandardize.dir/Charge.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Wrap/Charge.cpp
[ 99%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Fragment.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMolStandardize.dir/Fragment.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Wrap/Fragment.cpp
[ 99%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Normalize.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMolStandardize.dir/Normalize.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Wrap/Normalize.cpp
[ 99%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Metal.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_BUILD_COORDGEN_SUPPORT -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMolStandardize.dir/Metal.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Wrap/Metal.cpp
[ 99%] Linking CXX shared module ../../../../rdkit/Chem/MolStandardize/rdMolStandardize.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolStandardize.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/MolStandardize/rdMolStandardize.so CMakeFiles/rdMolStandardize.dir/rdMolStandardize.cpp.o CMakeFiles/rdMolStandardize.dir/Validate.cpp.o CMakeFiles/rdMolStandardize.dir/Charge.cpp.o CMakeFiles/rdMolStandardize.dir/Fragment.cpp.o CMakeFiles/rdMolStandardize.dir/Normalize.cpp.o CMakeFiles/rdMolStandardize.dir/Metal.cpp.o ../../../../lib/libRDKitMolStandardize.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 -lcoordgenlibs -lmaeparser ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lboost_serialization 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 99%] Built target rdMolStandardize
[100%] Linking CXX executable molTautomerTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molTautomerTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/molTautomerTest.dir/testTautomer.cpp.o  -o molTautomerTest ../../../lib/libRDKitMolStandardize.so.1.2018.09.1 ../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lcoordgenlibs -lmaeparser -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[100%] Built target molTautomerTest
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_start /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 0
make[2]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
STATIC_LINK=0 RDKIT_LIBDIR=/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf//lib pg_buildext build /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit build-%v
supported-versions: WARNING! Unknown distribution: raspbian
debian found in ID_LIKE, treating as Debian
### build 11 ###
make[2]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/build-11'
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o rdkit_io.o /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_io.c
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o mol_op.o /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c: In function 'mol_murckoscaffold':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:253:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
   CROMol scaffold = MolMurckoScaffold(mol);
   ^~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c: In function 'mol_hash':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:273:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
   char *res = pnstrdup(str, len);
   ^~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c: In function 'mol_adjust_query_properties':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:286:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
   char *data = PG_GETARG_CSTRING(1);
   ^~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:290:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
   Mol *res = deconstructROMol(adj);
   ^~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c: In function 'mol_to_svg':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:305:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
   char *legend = PG_GETARG_CSTRING(1);
   ^~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c: In function 'fmcs_smiles':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:329:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
   char *res = pnstrdup(str, strlen(str));
   ^~~~
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:34:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c: In function 'fmcs_mol2s_transition':
/usr/include/postgresql/11/server/fmgr.h:238:29: warning: initialization of 'CROMol' {aka 'void *'} from 'Datum' {aka 'unsigned int'} makes pointer from integer without a cast [-Wint-conversion]
 #define PG_GETARG_DATUM(n)  (fcinfo->arg[n])
                             ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:381:18: note: in expansion of macro 'PG_GETARG_DATUM'
     CROMol mol = PG_GETARG_DATUM(1);
                  ^~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:397:5: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
     text *ts = (text *)palloc(ts_size);  // new return value
     ^~~~
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:34:
/usr/include/postgresql/11/server/fmgr.h:238:29: warning: initialization of 'CROMol' {aka 'void *'} from 'Datum' {aka 'unsigned int'} makes pointer from integer without a cast [-Wint-conversion]
 #define PG_GETARG_DATUM(n)  (fcinfo->arg[n])
                             ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:409:18: note: in expansion of macro 'PG_GETARG_DATUM'
     CROMol mol = PG_GETARG_DATUM(1);
                  ^~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:417:5: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
     char *smiles = makeMolText(mol, &len, false);
     ^~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c: In function 'fmcs_mols':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:455:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
   int32 ts_size = VARHDRSZ + strlen(str);
   ^~~~~
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:34:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c: In function 'fmcs_mol_transition':
/usr/include/postgresql/11/server/fmgr.h:238:29: warning: initialization of 'CROMol' {aka 'void *'} from 'Datum' {aka 'unsigned int'} makes pointer from integer without a cast [-Wint-conversion]
 #define PG_GETARG_DATUM(n)  (fcinfo->arg[n])
                             ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:477:18: note: in expansion of macro 'PG_GETARG_DATUM'
     CROMol mol = PG_GETARG_DATUM(1);
                  ^~~~~~~~~~~~~~~
/usr/include/postgresql/11/server/fmgr.h:238:29: warning: initialization of 'CROMol' {aka 'void *'} from 'Datum' {aka 'unsigned int'} makes pointer from integer without a cast [-Wint-conversion]
 #define PG_GETARG_DATUM(n)  (fcinfo->arg[n])
                             ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:488:18: note: in expansion of macro 'PG_GETARG_DATUM'
     CROMol mol = PG_GETARG_DATUM(1);
                  ^~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c: In function 'fmcs_smiles_transition':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:361:1: warning: control reaches end of non-void function [-Wreturn-type]
 }
 ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c: In function 'fmcs_mol_transition':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:496:1: warning: control reaches end of non-void function [-Wreturn-type]
 }
 ^
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o bfp_op.o /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/bfp_op.c
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o sfp_op.o /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/sfp_op.c
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o rxn_op.o /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rxn_op.c
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rxn_op.c:164:1: warning: multi-line comment [-Wcomment]
 //  /* keep compiler quiet - no extra ; */                                \
 ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rxn_op.c: In function 'reaction_to_svg':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rxn_op.c:179:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
   bool highlightByReactants = PG_GETARG_BOOL(1);
   ^~~~
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o rdkit_gist.o /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c: In function 'soergeldistsign':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:240:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
   uint8 *as = (uint8 *)VARDATA(a);
   ^~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c: In function 'soergeldist':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:275:16: warning: implicit declaration of function 'floor' [-Wimplicit-function-declaration]
   return (int) floor(10000*soergeldistsign(a, b));
                ^~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:275:16: warning: incompatible implicit declaration of built-in function 'floor'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:275:16: note: include '<math.h>' or provide a declaration of 'floor'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:42:1:
+#include <math.h>
 
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:275:16:
   return (int) floor(10000*soergeldistsign(a, b));
                ^~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:262:10: warning: unused variable 'd' [-Wunused-variable]
   double d;
          ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c: In function 'gmol_consistent':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:526:7: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
       uint8 *k = (uint8 *)VARDATA(key);
       ^~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:538:7: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
       uint8 *k = (uint8 *)VARDATA(key);
       ^~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:570:7: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
       uint8 *k = (uint8 *)VARDATA(key);
       ^~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c: In function 'rdkit_consistent':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:658:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
   int siglen = SIGLEN(query);
   ^~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:673:5: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
     uint8 *k = (uint8 *)VARDATA(key);
     ^~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c: In function 'gsfp_consistent':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:708:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
   int sum, overlapSum, overlapN;
   ^~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:714:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
   int nKey = (ISALLTRUE(key)) ?
   ^~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c: In function 'greaction_consistent':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:787:7: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
       uint8 *k = (uint8 *)VARDATA(key);
       ^~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:804:7: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
       uint8 *k = (uint8 *)VARDATA(key);
       ^~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:832:7: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
       uint8 *k = (uint8 *)VARDATA(key);
       ^~~~~
At top level:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:646:1: warning: 'rdkit_consistent' defined but not used [-Wunused-function]
 rdkit_consistent(GISTENTRY *entry, StrategyNumber strategy, bytea *key, bytea *query)
 ^~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:261:1: warning: 'soergeldist' defined but not used [-Wunused-function]
 soergeldist(bytea *a, bytea *b) {
 ^~~~~~~~~~~
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o bfp_gist.o /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/bfp_gist.c
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/bfp_gist.c: In function 'merge_key':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/bfp_gist.c:699:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
   int siglen = GBFP_INNER_SIGLEN(result);
   ^~~
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o bfp_gin.o /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/bfp_gin.c
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o low_gist.o /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/low_gist.c
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/low_gist.c: In function 'gslfp_consistent':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/low_gist.c:410:30: warning: implicit declaration of function 'searchSfpCache' [-Wimplicit-function-declaration]
   fcinfo->flinfo->fn_extra = searchSfpCache(
                              ^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/low_gist.c:410:28: warning: assignment to 'void *' from 'int' makes pointer from integer without a cast [-Wint-conversion]
   fcinfo->flinfo->fn_extra = searchSfpCache(
                            ^
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o guc.o /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/guc.c
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o cache.o /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/cache.c
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/cache.c: In function 'createCache':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/cache.c:312:17: warning: assignment discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers]
     methodsOrig = ctx->methods;
                 ^
In file included from /usr/include/postgresql/11/server/postgres.h:47,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/cache.c:33:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/cache.c:341:19: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'unsigned int' [-Wformat=]
       elog(ERROR, "Could not allocate %ld bytes", sizeof(*newholder));
                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  ~~~~~~~~~~~~~~~~~~
/usr/include/postgresql/11/server/utils/elog.h:202:23: note: in definition of macro 'elog'
   elog_finish(elevel, __VA_ARGS__); \
                       ^~~~~~~~~~~
g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-function -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"' -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o adapter.o /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/adapter.cpp
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o bitstring.o /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/bitstring.c
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/bitstring.c: In function 'bitstringUnion':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/bitstring.c:72:7: warning: unused variable 'i' [-Wunused-variable]
   int i;
       ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/bitstring.c: In function 'bitstringIntersection':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/bitstring.c:106:7: warning: unused variable 'i' [-Wunused-variable]
   int i;
       ^
g++ -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -shared -o rdkit.so rdkit_io.o mol_op.o bfp_op.o sfp_op.o rxn_op.o rdkit_gist.o bfp_gist.o bfp_gin.o low_gist.o guc.o cache.o adapter.o bitstring.o -L/usr/lib/arm-linux-gnueabihf  -Wl,-z,relro -Wl,-z,now -L/usr/lib/llvm-7/lib  -L/usr/lib/arm-linux-gnueabihf/mit-krb5 -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -L/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf//lib   -lRDKitMolDraw2D -lRDKitMolTransforms -lRDKitMolHash -lRDKitFMCS -lRDKitChemReactions -lRDKitChemTransforms -lRDKitFileParsers -lRDKitSmilesParse -lRDKitFingerprints -lRDKitSubgraphs -lRDKitDescriptors -lRDKitPartialCharges -lRDKitSubstructMatch  -lRDKitGraphMol -lRDKitEigenSolvers -lRDKitDataStructs -lRDKitDepictor -lRDKitRDGeometryLib -lRDKitRDGeneral -pthread  
sed -e's/@RDKIT_PG_BFP_GIST_FETCH@/FUNCTION    9   gbfp_fetch (internal),/;' \
-e's/@RDKIT_GIN_BFP_TRICONSISTENT@/FUNCTION    6   gin_bfp_triconsistent(internal, int2, bfp, int4, internal, internal, internal),/' \
-e's/@RDKIT_PARALLEL_SAFE@/PARALLEL SAFE/' \
 /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit.sql.in > rdkit--3.7.sql
/usr/bin/clang-7 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o rdkit_io.bc /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_io.c
/usr/bin/clang-7 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o mol_op.bc /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:361:1: warning: control may reach end of non-void function [-Wreturn-type]
}
^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:381:12: warning: incompatible integer to pointer conversion initializing 'CROMol' (aka 'void *') with an expression of type 'Datum' (aka 'unsigned int') [-Wint-conversion]
    CROMol mol = PG_GETARG_DATUM(1);
           ^     ~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:409:12: warning: incompatible integer to pointer conversion initializing 'CROMol' (aka 'void *') with an expression of type 'Datum' (aka 'unsigned int') [-Wint-conversion]
    CROMol mol = PG_GETARG_DATUM(1);
           ^     ~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:477:12: warning: incompatible integer to pointer conversion initializing 'CROMol' (aka 'void *') with an expression of type 'Datum' (aka 'unsigned int') [-Wint-conversion]
    CROMol mol = PG_GETARG_DATUM(1);
           ^     ~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:488:12: warning: incompatible integer to pointer conversion initializing 'CROMol' (aka 'void *') with an expression of type 'Datum' (aka 'unsigned int') [-Wint-conversion]
    CROMol mol = PG_GETARG_DATUM(1);
           ^     ~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:496:1: warning: control may reach end of non-void function [-Wreturn-type]
}
^
6 warnings generated.
/usr/bin/clang-7 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o bfp_op.bc /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/bfp_op.c
/usr/bin/clang-7 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o sfp_op.bc /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/sfp_op.c
/usr/bin/clang-7 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o rxn_op.bc /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rxn_op.c
/usr/bin/clang-7 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o rdkit_gist.bc /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c
/usr/bin/clang-7 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o bfp_gist.bc /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/bfp_gist.c
/usr/bin/clang-7 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o bfp_gin.bc /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/bfp_gin.c
/usr/bin/clang-7 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o low_gist.bc /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/low_gist.c
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/low_gist.c:410:30: warning: implicit declaration of function 'searchSfpCache' is invalid in C99 [-Wimplicit-function-declaration]
  fcinfo->flinfo->fn_extra = searchSfpCache(
                             ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/low_gist.c:410:28: warning: incompatible integer to pointer conversion assigning to 'void *' from 'int' [-Wint-conversion]
  fcinfo->flinfo->fn_extra = searchSfpCache(
                           ^ ~~~~~~~~~~~~~~~
2 warnings generated.
/usr/bin/clang-7 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o guc.bc /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/guc.c
/usr/bin/clang-7 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o cache.bc /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/cache.c
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/cache.c:312:17: warning: assigning to 'MemoryContextMethods *' (aka 'struct MemoryContextMethods *') from 'const MemoryContextMethods *' (aka 'const struct MemoryContextMethods *') discards qualifiers [-Wincompatible-pointer-types-discards-qualifiers]
    methodsOrig = ctx->methods;
                ^ ~~~~~~~~~~~~
1 warning generated.
/usr/bin/clang-7 -xc++ -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -emit-llvm -c -o adapter.bc /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/adapter.cpp
opt-7 -module-summary -f adapter.bc -o adapter.bc
/usr/bin/clang-7 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o bitstring.bc /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/bitstring.c
make[2]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/build-11'
(cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code; doxygen doxygen/doxygen.config)
warning: Tag `SYMBOL_CACHE_SIZE' at line 337 of file `doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag `SHOW_DIRECTORIES' at line 557 of file `doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag `HTML_ALIGN_MEMBERS' at line 971 of file `doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag `USE_INLINE_TREES' at line 1162 of file `doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag `XML_SCHEMA' at line 1425 of file `doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag `XML_DTD' at line 1431 of file `doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: doxygen no longer ships with the FreeSans font.
You may want to clear or change DOT_FONTNAME.
Otherwise you run the risk that the wrong font is being used for dot generated graphs.
Searching for include files...
Searching for example files...
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Searching for dot files...
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Searching for dia files...
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Searching INPUT for files to process...
Searching for files in directory /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol
Searching for files in directory /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions
Searching for files in directory /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate
Searching for files in directory /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/tutorial
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Reading and parsing tag files
Parsing files
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/atomic_data.h...
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Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/AtomIterators.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/AtomIterators.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Bond.h...
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Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/BondIterators.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/BondIterators.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Canon.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Canon.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/CartesianProduct.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/CartesianProduct.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/Enumerate.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/Enumerate.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/EnumerateBase.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/EnumerateBase.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/EnumerateTypes.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/EnumerateTypes.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/EnumerationPickler.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/EnumerationPickler.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/EnumerationStrategyBase.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/EnumerationStrategyBase.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/EvenSamplePairs.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/EvenSamplePairs.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/RandomSample.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/RandomSample.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/RandomSampleAllBBs.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/RandomSampleAllBBs.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/PreprocessRxn.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/PreprocessRxn.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Reaction.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Reaction.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionFingerprints.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionFingerprints.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionParser.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionParser.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionPickler.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionPickler.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionRunner.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionRunner.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionUtils.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionUtils.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/SanitizeRxn.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/SanitizeRxn.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/ChemTransforms.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/ChemTransforms.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/MolFragmenter.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/MolFragmenter.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Chirality.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Chirality.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Conformer.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Conformer.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/DepictUtils.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/DepictUtils.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/EmbeddedFrag.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/EmbeddedFrag.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/RDDepictor.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/RDDepictor.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/AUTOCORR2D.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/AUTOCORR2D.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/AUTOCORR3D.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/AUTOCORR3D.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/ConnectivityDescriptors.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/ConnectivityDescriptors.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Crippen.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Crippen.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Data3Ddescriptors.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Data3Ddescriptors.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/EEM.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/EEM.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/GETAWAY.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/GETAWAY.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Lipinski.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Lipinski.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/MolData3Ddescriptors.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/MolData3Ddescriptors.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/MolDescriptors.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/MolDescriptors.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/MolDescriptors3D.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/MolDescriptors3D.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/MolSurf.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/MolSurf.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/MORSE.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/MORSE.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/MQN.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/MQN.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/PBF.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/PBF.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/PMI.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/PMI.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Property.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Property.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/RDF.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/RDF.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/RegisterDescriptor.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/RegisterDescriptor.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/USRDescriptor.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/USRDescriptor.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/WHIM.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/WHIM.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/details.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/details.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/Embedder.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/Embedder.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/FileParsers.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/FileParsers.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/FileParserUtils.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/FileParserUtils.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolFileStereochem.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolFileStereochem.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolSupplier.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolSupplier.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolWriters.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolWriters.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/ProximityBonds.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/ProximityBonds.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SequenceParsers.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SequenceParsers.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SequenceWriters.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SequenceWriters.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterCatalog.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterCatalog.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterCatalogEntry.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterCatalogEntry.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatcherBase.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatcherBase.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatchers.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatchers.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/Filters.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/Filters.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FunctionalGroupHierarchy.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FunctionalGroupHierarchy.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairs.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairs.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintGenerator.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintGenerator.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Fingerprints.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Fingerprints.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintUtil.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintUtil.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MACCS.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MACCS.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganFingerprints.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganFingerprints.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Composition2N.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Composition2N.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/DebugTrace.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/DebugTrace.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/DuplicatedSeedCache.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/DuplicatedSeedCache.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/FMCS.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/FMCS.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Graph.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Graph.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/MatchTable.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/MatchTable.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/MaximumCommonSubgraph.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/MaximumCommonSubgraph.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/RingMatchTableSet.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/RingMatchTableSet.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Seed.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Seed.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/SeedSet.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/SeedSet.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/SubstructMatchCustom.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/SubstructMatchCustom.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/SubstructureCache.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/SubstructureCache.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Target.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Target.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/TargetMatch.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/TargetMatch.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionAngleM6.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionAngleM6.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/MMFF/AtomTyper.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/MMFF/AtomTyper.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/MMFF/Builder.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/MMFF/Builder.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/MMFF/MMFF.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/MMFF/MMFF.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/UFF/AtomTyper.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/UFF/AtomTyper.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/UFF/Builder.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/UFF/Builder.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/UFF/UFF.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/UFF/UFF.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatalogEntry.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatalogEntry.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatalogUtils.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatalogUtils.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatGenerator.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatGenerator.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatParams.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatParams.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragFPGenerator.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragFPGenerator.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/GraphMol.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/GraphMol.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MMPA/MMPA.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MMPA/MMPA.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/AlignMolecules.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/AlignMolecules.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/O3AAlignMolecules.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/O3AAlignMolecules.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolBundle.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolBundle.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolCatalog/MolCatalog.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolCatalog/MolCatalog.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolCatalog/MolCatalogEntry.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolCatalog/MolCatalogEntry.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolCatalog/MolCatalogParams.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolCatalog/MolCatalogParams.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/FeatureParser.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/FeatureParser.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/MolChemicalFeature.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/MolChemicalFeature.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureFactory.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureFactory.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2D.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2D.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2DCairo.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2DCairo.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2DDetails.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2DDetails.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2DQt.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2DQt.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2DSVG.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2DSVG.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2DUtils.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2DUtils.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2Dwx.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2Dwx.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MultiMolDraw2D.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MultiMolDraw2D.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolHash/MolHash.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolHash/MolHash.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolInterchange/details.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolInterchange/details.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolInterchange/MolInterchange.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolInterchange/MolInterchange.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolOps.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolOps.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolPickler.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolPickler.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogEntry.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogEntry.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogParams.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogParams.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Charge.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Charge.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Fragment.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Fragment.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogEntry.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogEntry.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogParams.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogParams.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Metal.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Metal.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/MolStandardize.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/MolStandardize.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Normalize.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Normalize.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Tautomer.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Tautomer.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogEntry.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogEntry.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogParams.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogParams.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogEntry.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogEntry.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogParams.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogParams.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Validate.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Validate.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolTransforms/MolTransforms.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolTransforms/MolTransforms.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MonomerInfo.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MonomerInfo.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/new_canon.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/new_canon.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PartialCharges/GasteigerCharges.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PartialCharges/GasteigerCharges.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PartialCharges/GasteigerParams.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PartialCharges/GasteigerParams.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PeriodicTable.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PeriodicTable.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/QueryAtom.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/QueryAtom.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/QueryBond.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/QueryBond.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/QueryOps.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/QueryOps.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitQueries.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitQueries.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ReducedGraphs/ReducedGraphs.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ReducedGraphs/ReducedGraphs.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Resonance.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Resonance.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RGroupDecomposition/RGroupDecomp.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RGroupDecomposition/RGroupDecomp.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RingInfo.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RingInfo.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Rings.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Rings.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RWMol.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RWMol.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SanitException.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SanitException.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers/ShapeEncoder.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers/ShapeEncoder.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers/ShapeUtils.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers/ShapeUtils.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse/SLNAttribs.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse/SLNAttribs.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse/SLNParse.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse/SLNParse.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse/SLNParseOps.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse/SLNParseOps.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/primes.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/primes.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmartsWrite.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmartsWrite.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmilesParse.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmilesParse.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmilesParseOps.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmilesParseOps.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmilesWrite.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmilesWrite.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StereoGroup.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StereoGroup.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/Pattern.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/Pattern.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/ReCharge.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/ReCharge.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/Stereo.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/Stereo.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/StripSmallFragments.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/StripSmallFragments.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/StructChecker.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/StructChecker.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/StructCheckerOptions.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/StructCheckerOptions.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/Tautomer.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/Tautomer.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/Utilites.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/Utilites.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs/Subgraphs.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs/Subgraphs.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs/SubgraphUtils.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs/SubgraphUtils.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Substruct/SubstructMatch.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Substruct/SubstructMatch.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Substruct/SubstructUtils.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Substruct/SubstructUtils.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SubstructLibrary/SubstructLibrary.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SubstructLibrary/SubstructLibrary.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory/Snapshot.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory/Snapshot.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory/Trajectory.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory/Trajectory.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs/Catalog.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs/Catalog.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs/CatalogEntry.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs/CatalogEntry.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs/CatalogParams.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs/CatalogParams.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/base64.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/base64.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/BitOps.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/BitOps.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/BitVect.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/BitVect.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/BitVects.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/BitVects.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/BitVectUtils.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/BitVectUtils.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/DatastructsException.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/DatastructsException.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/DiscreteDistMat.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/DiscreteDistMat.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/DiscreteValueVect.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/DiscreteValueVect.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/ExplicitBitVect.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/ExplicitBitVect.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/FPBReader.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/FPBReader.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/MultiFPBReader.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/MultiFPBReader.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/SparseBitVect.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/SparseBitVect.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/SparseIntVect.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/SparseIntVect.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/AndQuery.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/AndQuery.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/EqualityQuery.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/EqualityQuery.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/GreaterEqualQuery.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/GreaterEqualQuery.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/GreaterQuery.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/GreaterQuery.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/LessEqualQuery.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/LessEqualQuery.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/LessQuery.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/LessQuery.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/OrQuery.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/OrQuery.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/RangeQuery.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/RangeQuery.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/SetQuery.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/SetQuery.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/XOrQuery.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/XOrQuery.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/InfoTheory/CorrMatGenerator.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/InfoTheory/CorrMatGenerator.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/InfoTheory/InfoBitRanker.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/InfoTheory/InfoBitRanker.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/InfoTheory/InfoGainFuncs.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/InfoTheory/InfoGainFuncs.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataManip/MetricMatrixCalc/MetricFuncs.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataManip/MetricMatrixCalc/MetricFuncs.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataManip/MetricMatrixCalc/MetricMatrixCalc.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataManip/MetricMatrixCalc/MetricMatrixCalc.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/DistPicker.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/DistPicker.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/HierarchicalClusterPicker.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/HierarchicalClusterPicker.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/MaxMinPicker.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/MaxMinPicker.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/BadFileException.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/BadFileException.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/BoostEndInclude.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/BoostEndInclude.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/BoostStartInclude.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/BoostStartInclude.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Exceptions.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Exceptions.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/export.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/export.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/FileParseException.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/FileParseException.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/hanoiSort.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/hanoiSort.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Invariant.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Invariant.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/LocaleSwitcher.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/LocaleSwitcher.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Ranking.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Ranking.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDAny.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDAny.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDConfig.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDConfig.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDLog.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDLog.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDProps.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDProps.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDThreads.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDThreads.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDValue-doublemagic.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDValue-doublemagic.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDValue-taggedunion.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDValue-taggedunion.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDValue.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDValue.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/StreamOps.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/StreamOps.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/versions.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/versions.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/boost_numpy.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/boost_numpy.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/import_array.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/import_array.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/iterator_next.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/iterator_next.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/pyint_api.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/pyint_api.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/BoundsMatrix.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/BoundsMatrix.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/ChiralSet.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/ChiralSet.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/ChiralViolationContrib.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/ChiralViolationContrib.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/DistGeomUtils.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/DistGeomUtils.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/DistViolationContrib.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/DistViolationContrib.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/FourthDimContrib.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/FourthDimContrib.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/TriangleSmooth.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/TriangleSmooth.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/Contrib.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/Contrib.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/ForceField.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/ForceField.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/AngleBend.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/AngleBend.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/AngleConstraint.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/AngleConstraint.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/BondStretch.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/BondStretch.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Contribs.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Contribs.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/DistanceConstraint.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/DistanceConstraint.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Nonbonded.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Nonbonded.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/OopBend.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/OopBend.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Params.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Params.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/PositionConstraint.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/PositionConstraint.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/StretchBend.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/StretchBend.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/TorsionAngle.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/TorsionAngle.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/TorsionConstraint.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/TorsionConstraint.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/AngleBend.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/AngleBend.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/AngleConstraint.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/AngleConstraint.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/BondStretch.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/BondStretch.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/Contribs.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/Contribs.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/DistanceConstraint.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/DistanceConstraint.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/Inversion.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/Inversion.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/Nonbonded.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/Nonbonded.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/Params.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/Params.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/PositionConstraint.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/PositionConstraint.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/TorsionAngle.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/TorsionAngle.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/TorsionConstraint.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/TorsionConstraint.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Alignment/AlignPoints.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Alignment/AlignPoints.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/EigenSolvers/PowerEigenSolver.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/EigenSolvers/PowerEigenSolver.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Matrix.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Matrix.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Optimizer/BFGSOpt.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Optimizer/BFGSOpt.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/SquareMatrix.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/SquareMatrix.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/SymmMatrix.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/SymmMatrix.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Vector.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Vector.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Grid3D.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Grid3D.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/GridUtils.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/GridUtils.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Transform.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Transform.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Transform2D.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Transform2D.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Transform3D.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Transform3D.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/UniformGrid3D.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/UniformGrid3D.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Utils.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Utils.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Features/Feature.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Features/Feature.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ChemicalFeatures/ChemicalFeature.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ChemicalFeatures/ChemicalFeature.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ChemicalFeatures/FreeChemicalFeature.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ChemicalFeatures/FreeChemicalFeature.h...
Building group list.../<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Contribs.h:15: warning: the name `Contribs.h' supplied as the second argument in the \file statement matches the following input files:
   /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Contribs.h
   /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/Contribs.h
Please use a more specific name by including a (larger) part of the path!
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/Contribs.h:13: warning: the name `Contribs.h' supplied as the second argument in the \file statement matches the following input files:
   /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Contribs.h
   /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/Contribs.h
Please use a more specific name by including a (larger) part of the path!

Building directory list...
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Generating docs for file TorsionAngle.h...
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Generating docs/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/ForceField.h:133: warning: The following parameters of ForceFields::ForceField::minimize(unsigned int snapshotFreq, RDKit::SnapshotVect *snapshotVect, unsigned int maxIts=200, double forceTol=1e-4, double energyTol=1e-6) are not documented:
  parameter 'snapshotFreq'
  parameter 'snapshotVect'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/ForceField.h:139: warning: argument 'snapshotFreq' of command @param is not found in the argument list of ForceFields::ForceField::minimize(unsigned int maxIts=200, double forceTol=1e-4, double energyTol=1e-6)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/ForceField.h:139: warning: argument 'snapshotVect' of command @param is not found in the argument list of ForceFields::ForceField::minimize(unsigned int maxIts=200, double forceTol=1e-4, double energyTol=1e-6)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/AngleBend.h:31: warning: argument 'angleType' of command @param is not found in the argument list of ForceFields::MMFF::AngleBendContrib::AngleBendContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, const MMFFAngle *mmffAngleParams, const MMFFProp *mmffPropParamsCentralAtom)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/AngleBend.h:40: warning: The following parameters of ForceFields::MMFF::AngleBendContrib::AngleBendContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, const MMFFAngle *mmffAngleParams, const MMFFProp *mmffPropParamsCentralAtom) are not documented:
  parameter 'mmffAngleParams'
  parameter 'mmffPropParamsCentralAtom'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/AngleConstraint.h:27: warning: argument 'minAngle' of command @param is not found in the argument list of ForceFields::MMFF::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/AngleConstraint.h:27: warning: argument 'maxAngle' of command @param is not found in the argument list of ForceFields::MMFF::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/AngleConstraint.h:36: warning: The following parameters of ForceFields::MMFF::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst) are not documented:
  parameter 'minAngleDeg'
  parameter 'maxAngleDeg'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/BondStretch.h:28: warning: argument 'bondType' of command @param is not found in the argument list of ForceFields::MMFF::BondStretchContrib::BondStretchContrib(ForceField *owner, const unsigned int idx1, const unsigned int idx2, const MMFFBond *mmffBondParams)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/BondStretch.h:28: warning: argument 'end1Params' of command @param is not found in the argument list of ForceFields::MMFF::BondStretchContrib::BondStretchContrib(ForceField *owner, const unsigned int idx1, const unsigned int idx2, const MMFFBond *mmffBondParams)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/BondStretch.h:28: warning: argument 'end2Params' of command @param is not found in the argument list of ForceFields::MMFF::BondStretchContrib::BondStretchContrib(ForceField *owner, const unsigned int idx1, const unsigned int idx2, const MMFFBond *mmffBondParams)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/BondStretch.h:36: warning: The following parameters of ForceFields::MMFF::BondStretchContrib::BondStretchContrib(ForceField *owner, const unsigned int idx1, const unsigned int idx2, const MMFFBond *mmffBondParams) are not documented:
  parameter 'mmffBondParams'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Nonbonded.h:59: warning: The following parameters of ForceFields::MMFF::EleContrib::EleContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, double chargeTerm, boost::uint8_t dielModel, bool is1_4) are not documented:
  parameter 'chargeTerm'
  parameter 'dielModel'
  parameter 'is1_4'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Params.h:161: warning: argument 'mmffArom' of command @param is not found in the argument list of ForceFields::MMFF::MMFFAromCollection::getMMFFArom(const boost::uint8_t *aromatic_types=NULL)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Params.h:177: warning: The following parameters of ForceFields::MMFF::MMFFAromCollection::getMMFFArom(const boost::uint8_t *aromatic_types=NULL) are not documented:
  parameter 'aromatic_types'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Params.h:1086: warning: The following parameters of ForceFields::MMFF::MMFFOopCollection::getMMFFOop(const bool isMMFFs=false, const std::string &mmffOop="") are not documented:
  parameter 'isMMFFs'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Params.h:1215: warning: The following parameters of ForceFields::MMFF::MMFFTorCollection::getMMFFTor(const bool isMMFFs, const std::string &mmffTor="") are not documented:
  parameter 'isMMFFs'
 for compound KeyErrorException...
Generating docs for compound MolData3Ddescriptors...
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Generating namespace index...
Generating docs for namespace BFGSOpt
Generating docs for namespace boost
Generating docs for namespace boost::logging
Generating docs for compound boost::logging::rdLogger...
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Generating docs for namespace boost_adaptbx::python
Generating docs for compound boost_adaptbx::python::ostream...
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Generating docs for compound DistGeom::BoundsMatrix...
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Generating docs for namespace ForceFields
Generating docs for compound ForceFields::ForceField...
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Generating docs for namespace ForceFields::CrystalFF
Generating docs for compound ForceFields::CrystalFF::TorsionAngleContribM6...
Generating docs for namespace ForceFields::MMFF
Generating docs for compound ForceFields::MMFF::AngleBendContrib...
Generating docs for compound ForceFields::MMFF::AngleConstraintContrib...
Generating docs for compound ForceFields::MMFF::BondStretchContrib...
Generating docs for compound ForceFields::MMFF::DistanceConstraintContrib...
Generating docs for compound ForceFields::MMFF::EleContrib...
Generating docs for compound ForceFields::MMFF::MMFFAngle...
Generating docs for compound ForceFields::MMFF::MMFFAngleCollection...
Generating docs for compound ForceFields::MMFF::MMFFAromCollection...
Generating docs for compound ForceFields::MMFF::MMFFBndkCollection...
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Generating docs for compound ForceFields::MMFF::MMFFDfsbCollection...
Generating docs for compound ForceFields::MMFF::MMFFHerschbachLaurie...
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Generating docs for compound ForceFields::MMFF::MMFFOop...
Generating docs for compound ForceFields::MMFF::MMFFOopCollection...
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Generating docs for compound ForceFields::MMFF::MMFFPBCICollection...
Generating docs for compound ForceFields::MMFF::MMFFProp...
Generating docs for compound ForceFields::MMFF::MMFFPropCollection...
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Generating docs for compound ForceFields::MMFF::MMFFTor...
Generating docs for compound ForceFields::MMFF::MMFFTorCollection...
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Generating docs for compound ForceFields::MMFF::MMFFVdWCollection...
Generating docs for compound ForceFields::MMFF::MMFFVdWRijstarEps...
Generating docs for compound ForceFields::MMFF::OopBendContrib...
Generating docs for compound ForceFields::MMFF::Posi/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/PositionConstraint.h:28: warning: argument 'minDispl' of command @param is not found in the argument list of ForceFields::MMFF::PositionConstraintContrib::PositionConstraintContrib(ForceField *owner, unsigned int idx, double maxDispl, double forceConst)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/StretchBend.h:32: warning: argument 'angleType' of command @param is not found in the argument list of ForceFields::MMFF::StretchBendContrib::StretchBendContrib(ForceField *owner, const unsigned int idx1, const unsigned int idx2, const unsigned int idx3, const MMFFStbn *mmffStbnParams, const MMFFAngle *mmffAngleParams, const MMFFBond *mmffBondParams1, const MMFFBond *mmffBondParams2)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/StretchBend.h:41: warning: The following parameters of ForceFields::MMFF::StretchBendContrib::StretchBendContrib(ForceField *owner, const unsigned int idx1, const unsigned int idx2, const unsigned int idx3, const MMFFStbn *mmffStbnParams, const MMFFAngle *mmffAngleParams, const MMFFBond *mmffBondParams1, const MMFFBond *mmffBondParams2) are not documented:
  parameter 'mmffStbnParams'
  parameter 'mmffAngleParams'
  parameter 'mmffBondParams1'
  parameter 'mmffBondParams2'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/TorsionAngle.h:34: warning: argument 'torsionType' of command @param is not found in the argument list of ForceFields::MMFF::TorsionAngleContrib::TorsionAngleContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, unsigned int idx4, const MMFFTor *mmffTorParams)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/TorsionAngle.h:45: warning: The following parameters of ForceFields::MMFF::TorsionAngleContrib::TorsionAngleContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, unsigned int idx4, const MMFFTor *mmffTorParams) are not documented:
  parameter 'mmffTorParams'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Nonbonded.h:35: warning: The following parameters of ForceFields::MMFF::VdWContrib::VdWContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, const MMFFVdWRijstarEps *mmffVdWConstants) are not documented:
  parameter 'mmffVdWConstants'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/AngleConstraint.h:27: warning: argument 'minAngle' of command @param is not found in the argument list of ForceFields::UFF::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/AngleConstraint.h:27: warning: argument 'maxAngle' of command @param is not found in the argument list of ForceFields::UFF::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/AngleConstraint.h:36: warning: The following parameters of ForceFields::UFF::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst) are not documented:
  parameter 'minAngleDeg'
  parameter 'maxAngleDeg'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/Inversion.h:39: warning: The following parameters of ForceFields::UFF::InversionContrib::InversionContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, unsigned int idx4, int at2AtomicNum, bool isCBoundToO, double oobForceScalingFactor=1.0) are not documented:
  parameter 'oobForceScalingFactor'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/PositionConstraint.h:28: warning: argument 'minDispl' of command @param is not found in the argument list of ForceFields::UFF::PositionConstraintContrib::PositionConstraintContrib(ForceField *owner, unsigned int idx, double maxDispl, double forceConst)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/RDDepictor.h:73: warning: The following parameters of RDDepict::compute2DCoords(RDKit::ROMol &mol, const RDGeom::INT_POINT2D_MAP *coordMap=0, bool canonOrient=false, bool clearConfs=true, unsigned int nFlipsPerSample=0, unsigned int nSamples=0, int sampleSeed=0, bool permuteDeg4Nodes=false, bool forceRDKit=false) are not documented:
  parameter 'forceRDKit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/RDDepictor.h:130: warning: The following parameters of RDDepict::compute2DCoordsMimicDistMat(RDKit::ROMol &mol, const DOUBLE_SMART_PTR *dmat=0, bool canonOrient=true, bool clearConfs=true, double weightDistMat=0.5, unsigned int nFlipsPerSample=3, unsigned int nSamples=100, int sampleSeed=25, bool permuteDeg4Nodes=true, bool forceRDKit=false) are not documented:
  parameter 'forceRDKit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/RDDepictor.h:162: warning: The following parameters of RDDepict::generateDepictionMatching2DStructure(RDKit::ROMol &mol, const RDKit::ROMol &reference, int confId=-1, RDKit::ROMol *referencePattern=static_cast< RDKit::ROMol * >(0), bool acceptFailure=false, bool forceRDKit=false) are not documented:
  parameter 'forceRDKit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/RDDepictor.h:170: warning: argument 'refPattern' of command @param is not found in the argument list of RDDepict::generateDepictionMatching3DStructure(RDKit::ROMol &mol, const RDKit::ROMol &reference, int confId=-1, RDKit::ROMol *referencePattern=0, bool acceptFailure=false, bool forceRDKit=false)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/RDDepictor.h:189: warning: The following parameters of RDDepict::generateDepictionMatching3DStructure(RDKit::ROMol &mol, const RDKit::ROMol &reference, int confId=-1, RDKit::ROMol *referencePattern=0, bool acceptFailure=false, bool forceRDKit=false) are not documented:
  parameter 'referencePattern'
  parameter 'forceRDKit'
tionConstraintContrib...
Generating docs for compound ForceFields::MMFF::StretchBendContrib...
Generating docs for compound ForceFields::MMFF::TorsionAngleContrib...
Generating docs for compound ForceFields::MMFF::TorsionConstraintContrib...
Generating docs for compound ForceFields::MMFF::VdWContrib...
Generating docs for namespace ForceFields::MMFF::Utils
Generating docs for namespace ForceFields::UFF
Generating docs for compound ForceFields::UFF::AngleBendContrib...
Generating docs for compound ForceFields::UFF::AngleConstraintContrib...
Generating docs for compound ForceFields::UFF::AtomicParams...
Generating docs for compound ForceFields::UFF::BondStretchContrib...
Generating docs for compound ForceFields::UFF::DistanceConstraintContrib...
Generating docs for compound ForceFields::UFF::InversionContrib...
Generating docs for compound ForceFields::UFF::ParamCollection...
Generating docs for compound ForceFields::UFF::PositionConstraintContrib...
Generating docs for compound ForceFields::UFF::TorsionAngleContrib...
Generating docs for compound ForceFields::UFF::TorsionConstraintContrib...
Generating docs for compound ForceFields::UFF::UFFAngle...
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Generating docs for compound ForceFields::UFF::UFFVdW...
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Generating docs for namespace ForceFields::UFF::Params
Generating docs for namespace ForceFields::UFF::Utils
Generating docs for namespace Invar
Generating docs for compound Invar::Invariant...
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Generating docs for namespace Queries
Generating docs for compound Queries::AndQuery...
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Generating docs for compound Rankers::argless...
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Generating docs for compound RDCatalog::Catalog...
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Generating docs for compound RDDataManip::MetricMatrixCalc...
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Generating docs for compound RDDepict::DepictException...
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Generating docs for compound RDFeatures::ExplicitFeature...
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Generating docs for namespace RDGeom
Generating docs for compound RDGeom::Grid3D...
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Generating docs for namespace RDInfoTheory
Generating docs for compound RDInfoTheory::BitCorrMatGenerator...
Generating docs for compound R/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/QueryOps.h:485: warning: Found unknown command `\overloadquery'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/QueryOps.h:494: warning: Found unknown command `\overloadquery'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SequenceParsers.h:94: warning: argument 'seq' of command @param is not found in the argument list of RDKit::HELMToMol(const char *helm, bool sanitize=true)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SequenceParsers.h:99: warning: The following parameters of RDKit::HELMToMol(const char *helm, bool sanitize=true) are not documented:
  parameter 'helm'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Fingerprints.h:105: warning: The following parameters of RDKit::LayeredFingerprintMol(const ROMol &mol, unsigned int layerFlags=0xFFFFFFFF, unsigned int minPath=1, unsigned int maxPath=7, unsigned int fpSize=2048, std::vector< unsigned int > *atomCounts=0, ExplicitBitVect *setOnlyBits=0, bool branchedPaths=true, const std::vector< boost::uint32_t > *fromAtoms=0) are not documented:
  parameter 'fromAtoms'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/QueryOps.h:485: warning: Found unknown command `\overloadquery'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/QueryOps.h:494: warning: Found unknown command `\overloadquery'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/FileParsers.h:267: warning: argument 'fName' of command @param is not found in the argument list of RDKit::MolToPDBFile(const ROMol &mol, const std::string &fname, int confId=-1, unsigned int flavor=0)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/FileParsers.h:278: warning: The following parameters of RDKit::MolToPDBFile(const ROMol &mol, const std::string &fname, int confId=-1, unsigned int flavor=0) are not documented:
  parameter 'fname'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmilesWrite.h:71: warning: The following parameters of RDKit::MolToSmiles(const ROMol &mol, bool doIsomericSmiles=true, bool doKekule=false, int rootedAtAtom=-1, bool canonical=true, bool allBondsExplicit=false, bool allHsExplicit=false, bool doRandom=false) are not documented:
  parameter 'doRandom'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/ChemTransforms.h:236: warning: argument 'delimiter' of command @param is not found in the argument list of RDKit::parseQueryDefFile(const std::string &filename, std::map< std::string, ROMOL_SPTR > &queryDefs, bool standardize=true)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/ChemTransforms.h:236: warning: argument 'comment' of command @param is not found in the argument list of RDKit::parseQueryDefFile(const std::string &filename, std::map< std::string, ROMOL_SPTR > &queryDefs, bool standardize=true)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/ChemTransforms.h:236: warning: argument 'nameColumn' of command @param is not found in the argument list of RDKit::parseQueryDefFile(const std::string &filename, std::map< std::string, ROMOL_SPTR > &queryDefs, bool standardize=true)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/ChemTransforms.h:236: warning: argument 'smartsColumn' of command @param is not found in the argument list of RDKit::parseQueryDefFile(const std::string &filename, std::map< std::string, ROMOL_SPTR > &queryDefs, bool standardize=true)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Fingerprints.h:26: warning: argument 'useBondOrders' of command @param is not found in the argument list of RDKit::RDKFingerprintMol(const ROMol &mol, unsigned int minPath=1, unsigned int maxPath=7, unsigned int fpSize=2048, unsigned int nBitsPerHash=2, bool useHs=true, double tgtDensity=0.0, unsigned int minSize=128, bool branchedPaths=true, bool useBondOrder=true, std::vector< boost::uint32_t > *atomInvariants=0, const std::vector< boost::uint32_t > *fromAtoms=0, std::vector< std::vector< boost::uint32_t > > *atomBits=0, std::map< boost::uint32_t, std::vector< std::vector< int > > > *bitInfo=0)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Fingerprints.h:53: warning: The following parameters of RDKit::RDKFingerprintMol(const ROMol &mol, unsigned int minPath=1, unsigned int maxPath=7, unsigned int fpSize=2048, unsigned int nBitsPerHash=2, bool useHs=true, double tgtDensity=0.0, unsigned int minSize=128, bool branchedPaths=true, bool useBondOrder=true, std::vector< boost::uint32_t > *atomInvariants=0, const std::vector< boost::uint32_t > *fromAtoms=0, std::vector< std::vector< boost::uint32_t > > *atomBits=0, std::map< boost::uint32_t, std::vector< std::vector< int > > > *bitInfo=0) are not documented:
  parameter 'useBondOrder'
  parameter 'bitInfo'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionRunner.h:96: warning: The following parameters of RDKit::reduceProductToSideChains(const ROMOL_SPTR &product, bool addDummyAtoms=true) are not documented:
  parameter 'product'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/ChemTransforms.h:111: warning: argument 'useChirality' of command @param is not found in the argument list of RDKit::replaceCore(const ROMol &mol, const ROMol &core, const MatchVectType &matchVect, bool replaceDummies=true, bool labelByIndex=false, bool requireDummyMatch=false)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionRunner.h:64: warning: argument 'reactantTemplateIdx' of command @param is not found in the argument list of RDKit::run_Reactant(const ChemicalReaction &rxn, const ROMOL_SPTR &reactant, unsigned int reactantIdx)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionRunner.h:77: warning: The following parameters of RDKit::run_Reactant(const ChemicalReaction &rxn, const ROMOL_SPTR &reactant, unsigned int reactantIdx) are not documented:
  parameter 'rxn'
  parameter 'reactantIdx'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintGenerator.h:107: warning: The following parameters of RDKit::AtomEnvironment::getBitId(FingerprintArguments< OutputType > *arguments, const std::vector< std::uint32_t > *atomInvariants, const std::vector< std::uint32_t > *bondInvariants, const AdditionalOutput *AdditionalOutput, const bool hashResults=false) const=0 are not documented:
  parameter 'AdditionalOutput'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Reaction.h:207: warning: argument 'maxProducts' of command @param is not found in the argument list of RDKit::ChemicalReaction::runReactants(const MOL_SPTR_VECT reactants, unsigned int numProducts=1000) const
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Reaction.h:221: warning: The following parameters of RDKit::ChemicalReaction::runReactants(const MOL_SPTR_VECT reactants, unsigned int numProducts=1000) const are not documented:
  parameter 'numProducts'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatchers.h:415: warning: argument 'matches' of command @param is not found in the argument list of RDKit::ExclusionList::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const inherited from member getMatches at line 100 in file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatcherBase.h
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatchers.h:415: warning: The following parameters of RDKit::ExclusionList::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const are not documented:
  parameter 'matchVect'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatcherBase.h:100: warning: argument 'matches' of command @param is not found in the argument list of RDKit::FilterMatcherBase::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const=0
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatcherBase.h:106: warning: The following parameters of RDKit::FilterMatcherBase::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const=0 are not documented:
  parameter 'matchVect'
DInfoTheory::InfoBitRanker...
Generating docs for namespace RDKit
Generating docs for compound RDKit::AdditionalOutput...
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Generating docs for compound RDKit::Bond...
Generating docs for compound RDKit::BondInvariantsGenerator...
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Generating docs for compound RDKit::CachedSmilesMolHolder...
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Generating docs for compound RDKit::charptr_functor...
Generating docs for compound RDKit::ChemicalReaction...
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Generating docs for compound RDKit::Conformer...
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Generating docs for nested compound RDKit::CXXAtomIterator::CXXAtomIter...
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Generating docs for nested compound RDKit::CXXBondIterator::CXXBondIter...
Generating docs for compound RDKit::Dict...
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Generating docs for compound RDKit::DiscreteDistMat...
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Generating docs for compound RDKit::EnumerationStrategyException...
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Generating docs for compound RDKit::ExclusionList...
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Generating docs for compound RDKit::FilterCatalog...
Generating docs for compound RDKit::FilterCatalogEntry...
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Generating docs for compound RDKit::FilterData_t...
Generating docs for compound RDKit::FilterHierarchyMatcher...
Generating docs for compound RDKit::FilterMatch...
Generating docs for compound RDKit::FilterMatcherBase...
Generating docs for compound RDKit::FilterProperty_t...
Generating docs for compound RDKit::FingerprintArguments...
Generating docs for compound RDKit::FingerprintGenerator...
Generating docs for compound RDKit::ForwardSDMolSupplier...
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Generating docs for compound RDKit::MCSAtomCompareParameters...
Generating docs for compound RDKit::MCSBo/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2D.h:176: warning: The following parameters of RDKit::MolDraw2D::drawMolecule(const ROMol &mol, const std::string &legend, const std::vector< int > *highlight_atoms, const std::vector< int > *highlight_bonds, const std::map< int, DrawColour > *highlight_atom_map=NULL, const std::map< int, DrawColour > *highlight_bond_map=NULL, const std::map< int, double > *highlight_radii=NULL, int confId=-1) are not documented:
  parameter 'highlight_bonds'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2D.h:207: warning: argument 'highlight_atom_map' of command @param is not found in the argument list of RDKit::MolDraw2D::drawMolecules(const std::vector< ROMol * > &mols, const std::vector< std::string > *legends=NULL, const std::vector< std::vector< int > > *highlight_atoms=NULL, const std::vector< std::vector< int > > *highlight_bonds=NULL, const std::vector< std::map< int, DrawColour > > *highlight_atom_maps=NULL, const std::vector< std::map< int, DrawColour > > *highlight_bond_maps=NULL, const std::vector< std::map< int, double > > *highlight_radii=NULL, const std::vector< int > *confIds=NULL)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2D.h:207: warning: argument 'highlight_bond_map' of command @param is not found in the argument list of RDKit::MolDraw2D::drawMolecules(const std::vector< ROMol * > &mols, const std::vector< std::string > *legends=NULL, const std::vector< std::vector< int > > *highlight_atoms=NULL, const std::vector< std::vector< int > > *highlight_bonds=NULL, const std::vector< std::map< int, DrawColour > > *highlight_atom_maps=NULL, const std::vector< std::map< int, DrawColour > > *highlight_bond_maps=NULL, const std::vector< std::map< int, double > > *highlight_radii=NULL, const std::vector< int > *confIds=NULL)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2D.h:207: warning: argument 'confId' of command @param is not found in the argument list of RDKit::MolDraw2D::drawMolecules(const std::vector< ROMol * > &mols, const std::vector< std::string > *legends=NULL, const std::vector< std::vector< int > > *highlight_atoms=NULL, const std::vector< std::vector< int > > *highlight_bonds=NULL, const std::vector< std::map< int, DrawColour > > *highlight_atom_maps=NULL, const std::vector< std::map< int, DrawColour > > *highlight_bond_maps=NULL, const std::vector< std::map< int, double > > *highlight_radii=NULL, const std::vector< int > *confIds=NULL)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2D.h:231: warning: The following parameters of RDKit::MolDraw2D::drawMolecules(const std::vector< ROMol * > &mols, const std::vector< std::string > *legends=NULL, const std::vector< std::vector< int > > *highlight_atoms=NULL, const std::vector< std::vector< int > > *highlight_bonds=NULL, const std::vector< std::map< int, DrawColour > > *highlight_atom_maps=NULL, const std::vector< std::map< int, DrawColour > > *highlight_bond_maps=NULL, const std::vector< std::map< int, double > > *highlight_radii=NULL, const std::vector< int > *confIds=NULL) are not documented:
  parameter 'highlight_bonds'
  parameter 'highlight_atom_maps'
  parameter 'highlight_bond_maps'
  parameter 'confIds'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Resonance.h:56: warning: argument 'numThreads' of command @param is not found in the argument list of RDKit::ResonanceMolSupplier::ResonanceMolSupplier(ROMol &mol, unsigned int flags=0, unsigned int maxStructs=1000)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatchers.h:322: warning: argument 'matches' of command @param is not found in the argument list of RDKit::SmartsMatcher::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const inherited from member getMatches at line 100 in file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatcherBase.h
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatchers.h:322: warning: The following parameters of RDKit::SmartsMatcher::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const are not documented:
  parameter 'matchVect'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolSupplier.h:206: warning: argument 'delimiter' of command @param is not found in the argument list of RDKit::SmilesMolSupplier::SmilesMolSupplier(const std::string &fileName)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolSupplier.h:206: warning: argument 'smilesColumn' of command @param is not found in the argument list of RDKit::SmilesMolSupplier::SmilesMolSupplier(const std::string &fileName)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolSupplier.h:206: warning: argument 'nameColumn' of command @param is not found in the argument list of RDKit::SmilesMolSupplier::SmilesMolSupplier(const std::string &fileName)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolSupplier.h:206: warning: argument 'titleLine' of command @param is not found in the argument list of RDKit::SmilesMolSupplier::SmilesMolSupplier(const std::string &fileName)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolSupplier.h:206: warning: argument 'sanitize' of command @param is not found in the argument list of RDKit::SmilesMolSupplier::SmilesMolSupplier(const std::string &fileName)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.h:103: warning: The following parameters of RDKit::AtomPair::AtomPairAtomEnv::getBitId(FingerprintArguments< OutputType > *arguments, const std::vector< std::uint32_t > *atomInvariants, const std::vector< std::uint32_t > *bondInvariants, const AdditionalOutput *AdditionalOutput, const bool hashResults=false) const are not documented:
  parameter 'AdditionalOutput'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairs.h:121: warning: The following parameters of RDKit::AtomPairs::getHashedAtomPairFingerprint(const ROMol &mol, unsigned int nBits=2048, unsigned int minLength=1, unsigned int maxLength=maxPathLen - 1, const std::vector< boost::uint32_t > *fromAtoms=0, const std::vector< boost::uint32_t > *ignoreAtoms=0, const std::vector< boost::uint32_t > *atomInvariants=0, bool includeChirality=false, bool use2D=true, int confId=-1) are not documented:
  parameter 'confId'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintUtil.h:77: warning: The following parameters of RDKit::AtomPairs::getTopologicalTorsionCode(const std::vector< std::uint32_t > &atomCodes, bool includeChirality=false) are not documented:
  parameter 'includeChirality'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Canon.h:113: warning: The following parameters of RDKit::Canon::canonicalizeFragment(ROMol &mol, int atomIdx, std::vector< AtomColors > &colors, const std::vector< unsigned int > &ranks, MolStack &molStack, const boost::dynamic_bitset<> *bondsInPlay=0, const std::vector< std::string > *bondSymbols=0, bool doIsomericSmiles=false, bool doRandom=false) are not documented:
  parameter 'bondsInPlay'
  parameter 'bondSymbols'
  parameter 'doIsomericSmiles'
  parameter 'doRandom'
ndCompareParameters...
Generating docs for compound RDKit::MCSParameters...
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Generating docs for compound RDKit::Canon::ChiralAtomCompareFunct/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Lipinski.h:45: warning: argument 'strict' of command @param is not found in the argument list of RDKit::Descriptors::calcNumRotatableBonds(const ROMol &mol, NumRotatableBondsOptions useStrictDefinition=Default)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Lipinski.h:52: warning: The following parameters of RDKit::Descriptors::calcNumRotatableBonds(const ROMol &mol, NumRotatableBondsOptions useStrictDefinition=Default) are not documented:
  parameter 'useStrictDefinition'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/USRDescriptor.h:79: warning: The following parameters of RDKit::Descriptors::USRCAT(const ROMol &mol, std::vector< double > &descriptor, std::vector< std::vector< unsigned int >> &atomIds, int confId=-1) are not documented:
  parameter 'atomIds'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatchers.h:86: warning: argument 'matches' of command @param is not found in the argument list of RDKit::FilterMatchOps::And::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const inherited from member getMatches at line 100 in file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatcherBase.h
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatchers.h:86: warning: The following parameters of RDKit::FilterMatchOps::And::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const are not documented:
  parameter 'matchVect'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatchers.h:204: warning: argument 'matches' of command @param is not found in the argument list of RDKit::FilterMatchOps::Not::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const inherited from member getMatches at line 100 in file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatcherBase.h
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatchers.h:204: warning: The following parameters of RDKit::FilterMatchOps::Not::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const are not documented:
  parameter 'matchVect'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatchers.h:148: warning: argument 'matches' of command @param is not found in the argument list of RDKit::FilterMatchOps::Or::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const inherited from member getMatches at line 100 in file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatcherBase.h
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatchers.h:148: warning: The following parameters of RDKit::FilterMatchOps::Or::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const are not documented:
  parameter 'matchVect'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MMPA/MMPA.h:36: warning: The following parameters of RDKit::MMPA::fragmentMol(const ROMol &mol, std::vector< std::pair< ROMOL_SPTR, ROMOL_SPTR > > &result, unsigned int maxCuts=3, unsigned int maxCutBonds=20, const std::string &pattern="[#6+0;!$(*=,#[!#6])]!@!=!#[*]") are not documented:
  parameter 'pattern'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MMPA/MMPA.h:57: warning: The following parameters of RDKit::MMPA::fragmentMol(const ROMol &mol, std::vector< std::pair< ROMOL_SPTR, ROMOL_SPTR > > &result, unsigned int minCuts, unsigned int maxCuts, unsigned int maxCutBonds, const std::string &pattern="[#6+0;!$(*=,#[!#6])]!@!=!#[*]") are not documented:
  parameter 'pattern'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolOps.h:645: warning: The following parameters of RDKit::MolOps::getAdjacencyMatrix(const ROMol &mol, bool useBO=false, int emptyVal=0, bool force=false, const char *propNamePrefix=0, const boost::dynamic_bitset<> *bondsToUse=0) are not documented:
  parameter 'bondsToUse'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolOps.h:257: warning: The following parameters of RDKit::MolOps::mergeQueryHs(const ROMol &mol, bool mergeUnmappedOnly=false) are not documented:
  parameter 'mergeUnmappedOnly'
or...
Generating docs for compound RDKit::Canon::MolStackElem...
Generating docs for compound RDKit::Canon::MolStackUnion...
Generating docs for compound RDKit::Canon::SpecialChiralityAtomCompareFunctor...
Generating docs for compound RDKit::Canon::SpecialSymmetryAtomCompareFunctor...
Generating docs for namespace RDKit::common_properties
Generating docs for namespace RDKit::constants
Generating docs for namespace RDKit::Descriptors
Generating docs for compound RDKit::Descriptors::CrippenParamCollection...
Generating docs for compound RDKit::Descriptors::CrippenParams...
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Gen/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.h:189: warning: argument 'OutputType' of command @param is not found in the argument list of RDKit::MorganFingerprint::getMorganGenerator(const unsigned int radius, const bool countSimulation=true, const bool includeChirality=false, const bool useBondTypes=true, const bool onlyNonzeroInvariants=false, AtomInvariantsGenerator *atomInvariantsGenerator=nullptr, BondInvariantsGenerator *bondInvariantsGenerator=nullptr, const std::uint32_t fpSize=2048, const std::vector< std::uint32_t > countBounds={1, 2, 4, 8}, const bool ownsAtomInvGen=false, const bool ownsBondInvGen=false)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.h:189: warning: argument 'radiu' of command @param is not found in the argument list of RDKit::MorganFingerprint::getMorganGenerator(const unsigned int radius, const bool countSimulation=true, const bool includeChirality=false, const bool useBondTypes=true, const bool onlyNonzeroInvariants=false, AtomInvariantsGenerator *atomInvariantsGenerator=nullptr, BondInvariantsGenerator *bondInvariantsGenerator=nullptr, const std::uint32_t fpSize=2048, const std::vector< std::uint32_t > countBounds={1, 2, 4, 8}, const bool ownsAtomInvGen=false, const bool ownsBondInvGen=false)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.h:228: warning: The following parameters of RDKit::MorganFingerprint::getMorganGenerator(const unsigned int radius, const bool countSimulation=true, const bool includeChirality=false, const bool useBondTypes=true, const bool onlyNonzeroInvariants=false, AtomInvariantsGenerator *atomInvariantsGenerator=nullptr, BondInvariantsGenerator *bondInvariantsGenerator=nullptr, const std::uint32_t fpSize=2048, const std::vector< std::uint32_t > countBounds={1, 2, 4, 8}, const bool ownsAtomInvGen=false, const bool ownsBondInvGen=false) are not documented:
  parameter 'radius'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.h:151: warning: The following parameters of RDKit::MorganFingerprint::MorganAtomEnv::getBitId(FingerprintArguments< OutputType > *arguments, const std::vector< std::uint32_t > *atomInvariants, const std::vector< std::uint32_t > *bondInvariants, const AdditionalOutput *AdditionalOutput, const bool hashResults=false) const are not documented:
  parameter 'AdditionalOutput'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganFingerprints.h:152: warning: The following parameters of RDKit::MorganFingerprints::getHashedFingerprint(const ROMol &mol, unsigned int radius, unsigned int nBits=2048, std::vector< boost::uint32_t > *invariants=0, const std::vector< boost::uint32_t > *fromAtoms=0, bool useChirality=false, bool useBondTypes=true, bool onlyNonzeroInvariants=false, BitInfoMap *atomsSettingBits=0) are not documented:
  parameter 'nBits'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.h:109: warning: argument 'useCountSimulation' of command @param is not found in the argument list of RDKit::RDKitFP::getRDKitFPGenerator(const unsigned int minPath=1, const unsigned int maxPath=7, const bool useHs=true, const bool branchedPaths=true, const bool useBondOrder=true, AtomInvariantsGenerator *atomInvariantsGenerator=nullptr, const bool countSimulation=true, const std::vector< std::uint32_t > countBounds={1, 2, 4, 8}, const std::uint32_t fpSize=2048, const bool ownsAtomInvGen=false)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.h:133: warning: The following parameters of RDKit::RDKitFP::getRDKitFPGenerator(const unsigned int minPath=1, const unsigned int maxPath=7, const bool useHs=true, const bool branchedPaths=true, const bool useBondOrder=true, AtomInvariantsGenerator *atomInvariantsGenerator=nullptr, const bool countSimulation=true, const std::vector< std::uint32_t > countBounds={1, 2, 4, 8}, const std::uint32_t fpSize=2048, const bool ownsAtomInvGen=false) are not documented:
  parameter 'countSimulation'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.h:35: warning: argument 'useCountSimulation' of command @param is not found in the argument list of RDKit::RDKitFP::RDKitFPArguments< OutputType >::RDKitFPArguments(unsigned int minPath, unsigned int maxPath, bool useHs, bool branchedPaths, bool useBondOrder, const bool countSimulation, const std::vector< std::uint32_t > countBounds, const std::uint32_t fpSize)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.h:52: warning: The following parameters of RDKit::RDKitFP::RDKitFPArguments::RDKitFPArguments(unsigned int minPath, unsigned int maxPath, bool useHs, bool branchedPaths, bool useBondOrder, const bool countSimulation, const std::vector< std::uint32_t > countBounds, const std::uint32_t fpSize) are not documented:
  parameter 'countSimulation'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.h:75: warning: The following parameters of RDKit::RDKitFP::RDKitFPAtomEnv::getBitId(FingerprintArguments< OutputType > *arguments, const std::vector< std::uint32_t > *atomInvariants, const std::vector< std::uint32_t > *bondInvariants, const AdditionalOutput *AdditionalOutput, const bool hashResults=false) const are not documented:
  parameter 'AdditionalOutput'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ReducedGraphs/ReducedGraphs.h:34: warning: The following parameters of RDKit::ReducedGraphs::generateMolExtendedReducedGraph(const ROMol &mol, std::vector< boost::dynamic_bitset<> > *atomTypes=0) are not documented:
  parameter 'atomTypes'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/SanitizeRxn.h:124: warning: argument 'operationThatFailed' of command @param is not found in the argument list of RDKit::RxnOps::sanitizeRxn(ChemicalReaction &rxn, unsigned int &operationsThatFailed, unsigned int sanitizeOps=SANITIZE_ALL, const MolOps::AdjustQueryParameters &params=DefaultRxnAdjustParams())
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/SanitizeRxn.h:155: warning: The following parameters of RDKit::RxnOps::sanitizeRxn(ChemicalReaction &rxn, unsigned int &operationsThatFailed, unsigned int sanitizeOps=SANITIZE_ALL, const MolOps::AdjustQueryParameters &params=DefaultRxnAdjustParams()) are not documented:
  parameter 'operationsThatFailed'
  parameter 'params'
erating docs for compound RDKit::MolStandardize::AcidBaseCatalogEntry...
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Ge/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:87: warning: argument 'useCountSimulation' of command @param is not found in the argument list of RDKit::TopologicalTorsion::getTopologicalTorsionGenerator(const bool includeChirality=false, const uint32_t torsionAtomCount=4, AtomInvariantsGenerator *atomInvariantsGenerator=nullptr, const bool countSimulation=true, const std::vector< std::uint32_t > countBounds={1, 2, 4, 8}, const std::uint32_t fpSize=2048, const bool ownsAtomInvGen=false)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:108: warning: The following parameters of RDKit::TopologicalTorsion::getTopologicalTorsionGenerator(const bool includeChirality=false, const uint32_t torsionAtomCount=4, AtomInvariantsGenerator *atomInvariantsGenerator=nullptr, const bool countSimulation=true, const std::vector< std::uint32_t > countBounds={1, 2, 4, 8}, const std::uint32_t fpSize=2048, const bool ownsAtomInvGen=false) are not documented:
  parameter 'countSimulation'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:33: warning: argument 'useCountSimulation' of command @param is not found in the argument list of RDKit::TopologicalTorsion::TopologicalTorsionArguments< OutputType >::TopologicalTorsionArguments(const bool includeChirality, const uint32_t torsionAtomCount, const bool countSimulation, const std::vector< std::uint32_t > countBounds, const std::uint32_t fpSize)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:44: warning: The following parameters of RDKit::TopologicalTorsion::TopologicalTorsionArguments::TopologicalTorsionArguments(const bool includeChirality, const uint32_t torsionAtomCount, const bool countSimulation, const std::vector< std::uint32_t > countBounds, const std::uint32_t fpSize) are not documented:
  parameter 'countSimulation'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:57: warning: The following parameters of RDKit::TopologicalTorsion::TopologicalTorsionAtomEnv::getBitId(FingerprintArguments< OutputType > *arguments, const std::vector< std::uint32_t > *atomInvariants, const std::vector< std::uint32_t > *bondInvariants, const AdditionalOutput *AdditionalOutput, const bool hashResults=false) const are not documented:
  parameter 'AdditionalOutput'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/HierarchicalClusterPicker.h:80: warning: The following parameters of RDPickers::HierarchicalClusterPicker::pick(const double *distMat, unsigned int poolSize, unsigned int pickSize) const are not documented:
  parameter 'distMat'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/MaxMinPicker.h:54: warning: argument 'firstPicks' of command @param is not found in the argument list of RDPickers::MaxMinPicker::lazyPick(T &func, unsigned int poolSize, unsigned int pickSize) const
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/MaxMinPicker.h:54: warning: argument 'seed' of command @param is not found in the argument list of RDPickers::MaxMinPicker::lazyPick(T &func, unsigned int poolSize, unsigned int pickSize) const
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/usr/lib/python3/dist-packages/recommonmark/parser.py:280: UserWarning: Unsupported inline type Hardbreak
  warn("Unsupported inline type " + inline.t)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/GettingStartedInPython.rst:2720: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/GettingStartedInPython.rst:2729: WARNING: Unexpected indentation.
WARNING: autodoc: failed to import module 'rdkit'; the following exception was raised:
No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.AtomPairs.Pairs'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.AtomPairs.Sheridan'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.AtomPairs.Torsions'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.AtomPairs.Utils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.BRICS'; the following exception was raised:
No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Draw.SimilarityMaps'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Draw.aggCanvas'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Draw.cairoCanvas'; the following exception was raised:
No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Draw.qtCanvas'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Draw.rdMolDraw2D'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.EState'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.EState.AtomTypes'; the following exception was raised:
No module named 'rdkit'
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No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.EState.EState_VSA'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.EState.Fingerprinter'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.EnumerateHeterocycles'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.EnumerateStereoisomers'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FastSDMolSupplier'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FeatFinderCLI'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FeatMaps'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FeatMaps.FeatMapParser'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FeatMaps.FeatMapPoint'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FeatMaps.FeatMapUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FeatMaps.FeatMaps'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Features'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Features.FeatDirUtilsRD'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Features.ShowFeats'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FilterCatalog'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Fingerprints'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Fingerprints.ClusterMols'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Fingerprints.DbFpSupplier'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Fingerprints.FingerprintMols'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Fingerprints.MolSimilarity'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Fingerprints.SimilarityScreener'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Fraggle'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Fraggle.FraggleSim'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FragmentCatalog'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FragmentMatcher'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Fragments'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FunctionalGroups'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.GraphDescriptors'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Graphs'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Lipinski'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MACCSkeys'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MCS'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolCatalog'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolDb'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolDb.FingerprintUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolDb.Loader'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolDb.Loader_orig'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolDb.Loader_sa'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolKey'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolKey.InchiInfo'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolKey.MolKey'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolStandardize.rdMolStandardize'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolSurf'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.PandasTools'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.PeriodicTable'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm2D'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm2D.Generate'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm2D.Gobbi_Pharm2D'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm2D.LazyGenerator'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm2D.Matcher'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm2D.SigFactory'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm2D.Utils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm3D'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm3D.EmbedLib'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm3D.ExcludedVolume'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm3D.Pharmacophore'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.PropertyMol'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.PyMol'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.QED'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Randomize'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Recap'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.ReducedGraphs'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.SATIS'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.SaltRemover'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Scaffolds'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Scaffolds.MurckoScaffold'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Scaffolds.ScaffoldTree'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.ShowMols'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.SimpleEnum'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.SimpleEnum.Enumerator'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Subshape'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Subshape.BuilderUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Subshape.SubshapeAligner'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Subshape.SubshapeBuilder'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Subshape.SubshapeObjects'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Subshape.testCombined'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Suppliers'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Suppliers.DbMolSupplier'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Suppliers.MolSupplier'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.TemplateAlign'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.TorsionFingerprints'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.fmcs'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.fmcs.fmcs'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.inchi'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdChemReactions'; the following exception was raised:
No module named 'rdkit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/source/rdkit.Chem.rdChemicalFeatures.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdChemicalFeatures module
=================================
WARNING: autodoc: failed to import module 'rdkit.Chem.rdChemicalFeatures'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdCoordGen'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdDepictor'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdDistGeom'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdFMCS'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdFingerprintGenerator'; the following exception was raised:
No module named 'rdkit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/source/rdkit.Chem.rdForceFieldHelpers.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdForceFieldHelpers module
=================================
WARNING: autodoc: failed to import module 'rdkit.Chem.rdForceFieldHelpers'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdFreeSASA'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdMMPA'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdMolAlign'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdMolCatalog'; the following exception was raised:
No module named 'rdkit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/source/rdkit.Chem.rdMolChemicalFeatures.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdMolChemicalFeatures module
=================================
WARNING: autodoc: failed to import module 'rdkit.Chem.rdMolChemicalFeatures'; the following exception was raised:
No module named 'rdkit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/source/rdkit.Chem.rdMolDescriptors.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdMolDescriptors module
=================================
WARNING: autodoc: failed to import module 'rdkit.Chem.rdMolDescriptors'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdMolHash'; the following exception was raised:
No module named 'rdkit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/source/rdkit.Chem.rdMolInterchange.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdMolInterchange module
=================================
WARNING: autodoc: failed to import module 'rdkit.Chem.rdMolInterchange'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdMolTransforms'; the following exception was raised:
No module named 'rdkit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/source/rdkit.Chem.rdPartialCharges.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdPartialCharges module
=================================
WARNING: autodoc: failed to import module 'rdkit.Chem.rdPartialCharges'; the following exception was raised:
No module named 'rdkit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/source/rdkit.Chem.rdRGroupDecomposition.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdRGroupDecomposition module
=================================
WARNING: autodoc: failed to import module 'rdkit.Chem.rdRGroupDecomposition'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdReducedGraphs'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdSLNParse'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdShapeHelpers'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdStructChecker'; the following exception was raised:
No module named 'rdkit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/source/rdkit.Chem.rdSubstructLibrary.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdSubstructLibrary module
=================================
WARNING: autodoc: failed to import module 'rdkit.Chem.rdSubstructLibrary'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdchem'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdfiltercatalog'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdfragcatalog'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdinchi'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdmolfiles'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdmolops'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdqueries'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdtrajectory'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataManip'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataManip.Metric'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataStructs'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataStructs.BitEnsemble'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataStructs.BitEnsembleDb'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataStructs.BitUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataStructs.HierarchyVis'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataStructs.LazySignature'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataStructs.TopNContainer'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataStructs.VectCollection'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Dbase'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Dbase.DbConnection'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Dbase.DbInfo'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Dbase.DbModule'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Dbase.DbReport'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Dbase.DbResultSet'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Dbase.DbUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Dbase.StorageUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DistanceGeometry'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ForceField'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Geometry'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.AnalyzeComposite'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.BuildComposite'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Cluster'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Cluster.Butina'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Cluster.ClusterUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Cluster.ClusterVis'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Cluster.Clusters'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Cluster.Murtagh'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Cluster.Resemblance'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Cluster.Standardize'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Cluster.murtagh_test'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Composite'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Composite.AdjustComposite'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Composite.BayesComposite'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Composite.Composite'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.CompositeRun'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Data'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Data.DataUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Data.FindQuantBounds'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Data.MLData'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Data.Quantize'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Data.SplitData'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Data.Stats'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Data.Transforms'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.BuildQuantTree'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.BuildSigTree'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.CrossValidate'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.DecTree'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.Forest'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.ID3'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.PruneTree'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.QuantTree'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.SigTree'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.Tree'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.TreeUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.TreeVis'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.randomtest'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Descriptors'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Descriptors.CompoundDescriptors'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Descriptors.Descriptors'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Descriptors.MoleculeDescriptors'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Descriptors.Parser'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.EnrichPlot'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.GrowComposite'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.InfoTheory'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.InfoTheory.BitClusterer'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.InfoTheory.BitRank'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.InfoTheory.entropy'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.KNN'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.KNN.CrossValidate'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.KNN.DistFunctions'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.KNN.KNNClassificationModel'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.KNN.KNNModel'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.KNN.KNNRegressionModel'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.MLUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.MLUtils.VoteImg'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.MatOps'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.ModelPackage'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.ModelPackage.PackageUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.ModelPackage.Packager'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.NaiveBayes'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.NaiveBayes.ClassificationModel'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.NaiveBayes.CrossValidate'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Neural'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Neural.ActFuncs'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Neural.CrossValidate'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Neural.NetNode'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Neural.Network'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Neural.Trainers'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.SLT'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.SLT.Risk'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Scoring'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Scoring.Scoring'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.ScreenComposite'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.files'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Numerics'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.RDConfig'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.RDLogger'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.RDPaths'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.RDRandom'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.SimDivFilters'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.SimDivFilters.SimilarityPickers'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.TestRunner'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.Filter'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.Node'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib.DbMolSupply'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib.DbPickleSupplier'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib.SDSupply'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib.SmartsMolFilter'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib.SmartsRemover'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib.SmilesDupeFilter'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib.SmilesOutput'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib.SmilesSupply'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib.demo'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.Output'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.Supply'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.Transform'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.six'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.utils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.utils.cactvs'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.utils.chemdraw'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.utils.chemdraw_qax'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.utils.chemutils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.utils.comhack'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.utils.fileutils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.utils.listutils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.utils.spiral'; the following exception was raised:
No module named 'rdkit'
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WARNING: autodoc: failed to import module 'rdkit'; the following exception was raised:
No module named 'rdkit'
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No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Avalon.pyAvalonTools'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.AllChem'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.AtomPairs'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.AtomPairs.Pairs'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.AtomPairs.Sheridan'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.AtomPairs.Torsions'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.AtomPairs.Utils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.BRICS'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.BuildFragmentCatalog'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.ChemUtils'; the following exception was raised:
No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.ChemUtils.DescriptorUtilities'; the following exception was raised:
No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.DSViewer'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Descriptors'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Descriptors3D'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Draw'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Draw.IPythonConsole'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Draw.MolDrawing'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Draw.SimilarityMaps'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Draw.aggCanvas'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Draw.cairoCanvas'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Draw.canvasbase'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Draw.mplCanvas'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Draw.qtCanvas'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Draw.rdMolDraw2D'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.EState'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.EState.AtomTypes'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.EState.EState'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.EState.EState_VSA'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.EState.Fingerprinter'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.EnumerateHeterocycles'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.EnumerateStereoisomers'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FastSDMolSupplier'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FeatFinderCLI'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FeatMaps'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FeatMaps.FeatMapParser'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FeatMaps.FeatMapPoint'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FeatMaps.FeatMapUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FeatMaps.FeatMaps'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Features'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Features.FeatDirUtilsRD'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Features.ShowFeats'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FilterCatalog'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Fingerprints'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Fingerprints.ClusterMols'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Fingerprints.DbFpSupplier'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Fingerprints.FingerprintMols'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Fingerprints.MolSimilarity'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Fingerprints.SimilarityScreener'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Fraggle'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Fraggle.FraggleSim'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FragmentCatalog'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FragmentMatcher'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Fragments'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FunctionalGroups'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.GraphDescriptors'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Graphs'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Lipinski'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MACCSkeys'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MCS'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolCatalog'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolDb'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolDb.FingerprintUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolDb.Loader'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolDb.Loader_orig'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolDb.Loader_sa'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolKey'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolKey.InchiInfo'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolKey.MolKey'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolStandardize.rdMolStandardize'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolSurf'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.PandasTools'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.PeriodicTable'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm2D'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm2D.Generate'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm2D.Gobbi_Pharm2D'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm2D.LazyGenerator'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm2D.Matcher'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm2D.SigFactory'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm2D.Utils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm3D'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm3D.EmbedLib'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm3D.ExcludedVolume'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm3D.Pharmacophore'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.PropertyMol'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.PyMol'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.QED'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Randomize'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Recap'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.ReducedGraphs'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.SATIS'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.SaltRemover'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Scaffolds'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Scaffolds.MurckoScaffold'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Scaffolds.ScaffoldTree'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.ShowMols'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.SimpleEnum'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.SimpleEnum.Enumerator'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Subshape'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Subshape.BuilderUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Subshape.SubshapeAligner'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Subshape.SubshapeBuilder'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Subshape.SubshapeObjects'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Subshape.testCombined'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Suppliers'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Suppliers.DbMolSupplier'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Suppliers.MolSupplier'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.TemplateAlign'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.TorsionFingerprints'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.fmcs'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.fmcs.fmcs'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.inchi'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdChemReactions'; the following exception was raised:
No module named 'rdkit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/source/rdkit.Chem.rdChemicalFeatures.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdChemicalFeatures module
=================================
WARNING: autodoc: failed to import module 'rdkit.Chem.rdChemicalFeatures'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdCoordGen'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdDepictor'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdDistGeom'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdFMCS'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdFingerprintGenerator'; the following exception was raised:
No module named 'rdkit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/source/rdkit.Chem.rdForceFieldHelpers.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdForceFieldHelpers module
=================================
WARNING: autodoc: failed to import module 'rdkit.Chem.rdForceFieldHelpers'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdFreeSASA'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdMMPA'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdMolAlign'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdMolCatalog'; the following exception was raised:
No module named 'rdkit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/source/rdkit.Chem.rdMolChemicalFeatures.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdMolChemicalFeatures module
=================================
WARNING: autodoc: failed to import module 'rdkit.Chem.rdMolChemicalFeatures'; the following exception was raised:
No module named 'rdkit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/source/rdkit.Chem.rdMolDescriptors.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdMolDescriptors module
=================================
WARNING: autodoc: failed to import module 'rdkit.Chem.rdMolDescriptors'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdMolHash'; the following exception was raised:
No module named 'rdkit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/source/rdkit.Chem.rdMolInterchange.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdMolInterchange module
=================================
WARNING: autodoc: failed to import module 'rdkit.Chem.rdMolInterchange'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdMolTransforms'; the following exception was raised:
No module named 'rdkit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/source/rdkit.Chem.rdPartialCharges.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdPartialCharges module
=================================
WARNING: autodoc: failed to import module 'rdkit.Chem.rdPartialCharges'; the following exception was raised:
No module named 'rdkit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/source/rdkit.Chem.rdRGroupDecomposition.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdRGroupDecomposition module
=================================
WARNING: autodoc: failed to import module 'rdkit.Chem.rdRGroupDecomposition'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdReducedGraphs'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdSLNParse'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdShapeHelpers'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdStructChecker'; the following exception was raised:
No module named 'rdkit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/source/rdkit.Chem.rdSubstructLibrary.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdSubstructLibrary module
=================================
WARNING: autodoc: failed to import module 'rdkit.Chem.rdSubstructLibrary'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdchem'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdfiltercatalog'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdfragcatalog'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdinchi'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdmolfiles'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdmolops'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdqueries'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdtrajectory'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataManip'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataManip.Metric'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataStructs'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataStructs.BitEnsemble'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataStructs.BitEnsembleDb'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataStructs.BitUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataStructs.HierarchyVis'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataStructs.LazySignature'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataStructs.TopNContainer'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataStructs.VectCollection'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Dbase'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Dbase.DbConnection'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Dbase.DbInfo'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Dbase.DbModule'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Dbase.DbReport'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Dbase.DbResultSet'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Dbase.DbUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Dbase.StorageUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DistanceGeometry'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ForceField'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Geometry'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.AnalyzeComposite'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.BuildComposite'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Cluster'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Cluster.Butina'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Cluster.ClusterUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Cluster.ClusterVis'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Cluster.Clusters'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Cluster.Murtagh'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Cluster.Resemblance'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Cluster.Standardize'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Cluster.murtagh_test'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Composite'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Composite.AdjustComposite'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Composite.BayesComposite'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Composite.Composite'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.CompositeRun'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Data'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Data.DataUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Data.FindQuantBounds'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Data.MLData'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Data.Quantize'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Data.SplitData'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Data.Stats'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Data.Transforms'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.BuildQuantTree'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.BuildSigTree'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.CrossValidate'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.DecTree'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.Forest'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.ID3'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.PruneTree'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.QuantTree'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.SigTree'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.Tree'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.TreeUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.TreeVis'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.randomtest'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Descriptors'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Descriptors.CompoundDescriptors'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Descriptors.Descriptors'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Descriptors.MoleculeDescriptors'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Descriptors.Parser'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.EnrichPlot'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.GrowComposite'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.InfoTheory'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.InfoTheory.BitClusterer'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.InfoTheory.BitRank'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.InfoTheory.entropy'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.KNN'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.KNN.CrossValidate'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.KNN.DistFunctions'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.KNN.KNNClassificationModel'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.KNN.KNNModel'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.KNN.KNNRegressionModel'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.MLUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.MLUtils.VoteImg'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.MatOps'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.ModelPackage'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.ModelPackage.PackageUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.ModelPackage.Packager'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.NaiveBayes'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.NaiveBayes.ClassificationModel'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.NaiveBayes.CrossValidate'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Neural'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Neural.ActFuncs'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Neural.CrossValidate'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Neural.NetNode'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Neural.Network'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Neural.Trainers'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.SLT'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.SLT.Risk'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Scoring'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Scoring.Scoring'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.ScreenComposite'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.files'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Numerics'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.RDConfig'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.RDLogger'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.RDPaths'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.RDRandom'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.SimDivFilters'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.SimDivFilters.SimilarityPickers'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.TestRunner'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.Filter'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.Node'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib.DbMolSupply'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib.DbPickleSupplier'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib.SDSupply'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib.SmartsMolFilter'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib.SmartsRemover'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib.SmilesDupeFilter'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib.SmilesOutput'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib.SmilesSupply'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib.demo'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.Output'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.Supply'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.Transform'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.six'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.utils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.utils.cactvs'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.utils.chemdraw'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.utils.chemdraw_qax'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.utils.chemutils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.utils.comhack'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.utils.fileutils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.utils.listutils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.utils.spiral'; the following exception was raised:
No module named 'rdkit'
looking for now-outdated files... none found
pickling environment... done
checking consistency... /<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/source/modules.rst: WARNING: document isn't included in any toctree
done
processing RDKit.tex...index Overview Install GettingStartedInPython RDKit_Book Cookbook Cartridge BackwardsIncompatibleChanges api-docs source/rdkit source/rdkit.Avalon source/rdkit.Avalon.pyAvalonTools source/rdkit.Chem source/rdkit.Chem.AtomPairs source/rdkit.Chem.AtomPairs.Pairs source/rdkit.Chem.AtomPairs.Sheridan source/rdkit.Chem.AtomPairs.Torsions source/rdkit.Chem.AtomPairs.Utils source/rdkit.Chem.ChemUtils source/rdkit.Chem.ChemUtils.AlignDepict source/rdkit.Chem.ChemUtils.BulkTester source/rdkit.Chem.ChemUtils.DescriptorUtilities source/rdkit.Chem.ChemUtils.SDFToCSV source/rdkit.Chem.ChemUtils.TemplateExpand source/rdkit.Chem.Draw source/rdkit.Chem.Draw.IPythonConsole source/rdkit.Chem.Draw.MolDrawing source/rdkit.Chem.Draw.SimilarityMaps source/rdkit.Chem.Draw.rdMolDraw2D source/rdkit.Chem.Draw.aggCanvas source/rdkit.Chem.Draw.cairoCanvas source/rdkit.Chem.Draw.canvasbase source/rdkit.Chem.Draw.mplCanvas source/rdkit.Chem.Draw.qtCanvas source/rdkit.Chem.EState source/rdkit.Chem.EState.AtomTypes source/rdkit.Chem.EState.EState source/rdkit.Chem.EState.EState_VSA source/rdkit.Chem.EState.Fingerprinter source/rdkit.Chem.FeatMaps source/rdkit.Chem.FeatMaps.FeatMapParser source/rdkit.Chem.FeatMaps.FeatMapPoint source/rdkit.Chem.FeatMaps.FeatMapUtils source/rdkit.Chem.FeatMaps.FeatMaps source/rdkit.Chem.Features source/rdkit.Chem.Features.FeatDirUtilsRD source/rdkit.Chem.Features.ShowFeats source/rdkit.Chem.Fingerprints source/rdkit.Chem.Fingerprints.ClusterMols source/rdkit.Chem.Fingerprints.DbFpSupplier source/rdkit.Chem.Fingerprints.FingerprintMols source/rdkit.Chem.Fingerprints.MolSimilarity source/rdkit.Chem.Fingerprints.SimilarityScreener source/rdkit.Chem.Fraggle source/rdkit.Chem.Fraggle.FraggleSim source/rdkit.Chem.MolDb source/rdkit.Chem.MolDb.FingerprintUtils source/rdkit.Chem.MolDb.Loader source/rdkit.Chem.MolDb.Loader_orig source/rdkit.Chem.MolDb.Loader_sa source/rdkit.Chem.MolKey source/rdkit.Chem.MolKey.InchiInfo 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Chapter 1.
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[]\T1/ptm/m/n/10 Cheminformatics nodes for KN-IME (dis-tributed from the KN-IME
 com-mu-nity site:
[1]

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Chapter 2.
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[]\T1/ptm/m/n/10 You can en-able sup-port for the Avalon toolkit by adding the 
ar-gu-ment
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win-dows that will down-

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\T1/ptm/m/n/10 load the InChI and Avalon toolkit sources from the InChI Trust a
nd Source-Forge repos-

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\T1/ptm/m/n/10 i-to-ries, re-spec-tively, and build the Post-greSQL car-tridge 
for the in-stalled ver-sion of

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[]\T1/pcr/m/n/10 "C:\Program Files\PostgreSQL\9.5\bin\pg_ctl.exe" -N "postgresq
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Chapter 3.

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[]\T1/ptm/m/n/10 displays a mes-sage like: \T1/pcr/m/n/10 [12:18:01] Explicit v
alence for atom # 1 O greater than
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[]\T1/ptm/m/n/10 Another op-tion for Com-pute2DCoords al-lows you to gen-er-ate
 2D de-pic-tions for molecules that

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\T1/ptm/m/n/10 closely mimic 3D con-for-ma-tions. This is avail-able us-ing the
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[]\T1/ptm/m/n/10 More fine-grained con-trol can be ob-tained us-ing the core fu
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Chapter 1.
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[]\T1/ptm/m/n/10 Cheminformatics nodes for KN-IME (dis-tributed from the KN-IME
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Chapter 2.
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Chapter 3.

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Chapter 4.
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Chapter 5.
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[]\T1/ptm/m/n/10 IPython note-book: [][]$http : / / nbviewer . ipython . org / 
gist / greglandrum / 8351725$[][] [][]$https : / / gist . github . com / gregla
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Chapter 6.
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@H[]\T1/pcr/m/n/9 ][]1[]C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc
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[109] [110] [111] [112] [113] [114] [115] [116] [117] [118]
Chapter 7.
[119] [120]
Chapter 8.
[121] [122] [123] [124] [125] [126] [127] [128] [129] [130] [131] [132]
[133] [134]
Chapter 9.
[135] [136]
Chapter 10.
(./RDKit.ind) [137] (./RDKit.aux)

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Chapter 1.
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[]\T1/ptm/m/n/10 Cheminformatics nodes for KN-IME (dis-tributed from the KN-IME
 com-mu-nity site:
[1]

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Chapter 2.
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[]\T1/ptm/m/n/10 You can en-able sup-port for the Avalon toolkit by adding the 
ar-gu-ment
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[]\T1/ptm/m/n/10 Add \T1/pcr/m/n/10 #define BOOST_PYTHON_NO_PY_SIGNATURES \T1/p
tm/m/n/10 at the top of \T1/pcr/m/n/10 Code/GraphMol/Wrap/
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[]\T1/ptm/m/n/10 Run cmake. Here's an ex-am-ple ba-sic com-mand line for 64bit 
win-dows that will down-

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\T1/ptm/m/n/10 load the InChI and Avalon toolkit sources from the InChI Trust a
nd Source-Forge repos-

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\T1/ptm/m/n/10 i-to-ries, re-spec-tively, and build the Post-greSQL car-tridge 
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[]\T1/pcr/m/n/10 "C:\Program Files\PostgreSQL\9.5\bin\pg_ctl.exe" -N "postgresq
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Chapter 3.

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[]\T1/ptm/m/n/10 displays a mes-sage like: \T1/pcr/m/n/10 [12:18:01] Explicit v
alence for atom # 1 O greater than
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[]\T1/ptm/m/n/10 Another op-tion for Com-pute2DCoords al-lows you to gen-er-ate
 2D de-pic-tions for molecules that

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\T1/ptm/m/n/10 closely mimic 3D con-for-ma-tions. This is avail-able us-ing the
 func-tion \T1/pcr/m/n/10 rdkit.Chem.AllChem.
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[]\T1/ptm/m/n/10 More fine-grained con-trol can be ob-tained us-ing the core fu
nc-tion \T1/pcr/m/n/10 rdkit.Chem.rdDepictor.
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2_mol2.png>] [30 <./cdk2_molgrid.png>] [31 <./cdk2_molgrid_aligned.png (PNG cop
y)>] [32] [33] [34] [35] [36] [37] [38] [39] [40] [41 <./mfp2_bit872.png> <./rd
k_bit1553.png>] [42 <./rdk_bit1553_2.png>] [43] [44 <./similarity_map_fp1.png>]
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[]\T1/ptm/m/n/10 Or we can use the bit rank-ing func-tion-al-ity from the \T1/p
cr/m/n/10 rdkit.ML.InfoTheory.rdInfoTheory.
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[]

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[65 <./picture_5.png (PNG copy)>] [66]
Chapter 4.
[67 <./picture_9.png (PNG copy)>] [68 <./picture_8.png> <./picture_7.png (PNG c
opy)>] [69 <./picture_10.png> <./picture_12.png>] [70 <./picture_11.png>]
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Chapter 5.
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[]\T1/ptm/m/n/10 IPython note-book: [][]$http : / / nbviewer . ipython . org / 
gist / greglandrum / 8351725$[][] [][]$https : / / gist . github . com / gregla
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Chapter 6.
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[]\T1/pcr/m/n/9 NC(N)[]=[]NCCC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](NC([]=[]O)[
C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](N)CC([]=[]O)O)C([]=[]O)N[C[]\T1/pcr/b
/n/9 @H[]\T1/pcr/m/n/9 ][]1[]CCSSC[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C(
[]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2c[nH]cn2)C([]=[]O)N2CCC[C
[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]2[]C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T
1/pcr/m/n/9 ](Cc2ccccc2)C([]=[]O)O)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/
9 ](Cc2ccc(O)cc|  

Overfull \hbox (388.84401pt too wide) in paragraph at lines 7100--7100
[]\T1/pcr/m/n/9 CC1(C)SSC(C)(C)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C([]=
[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2c[nH]cn2)C([]=[]O)N2CCC[C[]\
T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]2[]C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/p
cr/m/n/9 ](Cc2ccccc2)C([]=[]O)O)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ]
(Cc2ccc(O)cc2)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]1[]NC([]=[]O)[C[
]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CCCN[]=[]C(N)N)NC([]=[]|  

Overfull \vbox (2.68167pt too high) detected at line 7110
[106]
Overfull \hbox (21.64442pt too wide) in paragraph at lines 7124--7124
[]\T1/pcr/m/n/9 Cn1c(Nc2c(Cl)ccc(CNC([]=[]O)C(C)(C)C)c2Cl)nc2cc(C([]=[]O)Nc3ccc
c(C(F)(F)F)n3)c(N3CCC(F)(F)C3)cc21|  

Overfull \hbox (21.64442pt too wide) in paragraph at lines 7161--7161
[]\T1/pcr/m/n/9 Cn1c(Nc2c(Cl)ccc(CNC([]=[]O)C(C)(C)C)c2Cl)nc2cc(C([]=[]O)Nc3ccc
c(C(F)(F)F)n3)c(N3CCC(F)(F)C3)cc21|  
[107]
Overfull \hbox (21.64442pt too wide) in paragraph at lines 7185--7185
[]\T1/pcr/m/n/9 Cn1c(Nc2c(Cl)ccc(CNC([]=[]O)C(C)(C)C)c2Cl)nc2cc(C([]=[]O)Nc3ccc
c(C(F)(F)F)n3)c(N3CCC(F)(F)C3)cc21|  
[108]
Overfull \vbox (10.4835pt too high) detected at line 7319
[109] [110] [111] [112] [113] [114] [115] [116] [117] [118]
Chapter 7.
[119] [120]
Chapter 8.
[121] [122] [123] [124] [125] [126] [127] [128] [129] [130] [131] [132]
[133] [134]
Chapter 9.
[135] [136]
Chapter 10.
(./RDKit.ind) [137] (./RDKit.aux)

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Output written on RDKit.pdf (145 pages, 1621510 bytes).
Transcript written on RDKit.log.
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  Latex found 114 multiply defined reference(s)
=== TeX engine is 'pdfTeX'
Latexmk: All targets (RDKit.pdf) are up-to-date
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/_build/latex'
pdflatex finished; the PDF files are in _build/latex.
make[2]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book'
make[1]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg'
   debian/rules override_dh_auto_test
make[1]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg'
cp -r rdkit obj-*/
find /<<BUILDDIR>>/rdkit-201809.1+dfsg -name rdchem.so
/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/rdkit/Chem/rdchem.so
#export RDBASE=/<<BUILDDIR>>/rdkit-201809.1+dfsg PYTHONPATH=/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/ LD_LIBRARY_PATH="/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf//lib:"
PYTHONPATH=/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/:/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf//rdkit/Chem/ LD_LIBRARY_PATH="/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf//lib:" dh_auto_test
	cd obj-arm-linux-gnueabihf && make -j4 test ARGS\+=-j4
make[2]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
Running tests...
/usr/bin/ctest --force-new-ctest-process -j4
Test project /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf
        Start   1: testDict
        Start   2: testRDValue
        Start   3: testDataStructs
        Start   4: testFPB
  1/142 Test   #2: testRDValue ........................   Passed    0.14 sec
        Start   5: testMultiFPB
  2/142 Test   #3: testDataStructs ....................   Passed    0.20 sec
        Start   6: pyBV
  3/142 Test   #4: testFPB ............................   Passed    0.29 sec
        Start   7: pyDiscreteValueVect
  4/142 Test   #5: testMultiFPB .......................   Passed    0.25 sec
        Start   8: pySparseIntVect
  5/142 Test   #7: pyDiscreteValueVect ................   Passed    4.49 sec
        Start   9: pyFPB
  6/142 Test   #8: pySparseIntVect ....................   Passed    4.49 sec
        Start  10: testTransforms
  7/142 Test  #10: testTransforms .....................   Passed    0.06 sec
        Start  11: testGrid
  8/142 Test  #11: testGrid ...........................   Passed    0.53 sec
        Start  12: testPyGeometry
  9/142 Test   #9: pyFPB ..............................   Passed    0.86 sec
        Start  13: testMatrices
 10/142 Test  #13: testMatrices .......................   Passed    0.04 sec
        Start  14: testAlignment
 11/142 Test  #14: testAlignment ......................   Passed    0.09 sec
        Start  15: pyAlignment
 12/142 Test  #15: pyAlignment ........................   Passed    0.80 sec
        Start  16: testOptimizer
 13/142 Test  #12: testPyGeometry .....................   Passed    1.40 sec
        Start  17: testUFFForceField
 14/142 Test  #16: testOptimizer ......................   Passed    0.33 sec
        Start  18: testMMFFForceField
 15/142 Test  #17: testUFFForceField ..................   Passed    1.52 sec
        Start  19: pyForceFieldConstraints
 16/142 Test   #1: testDict ...........................   Passed    9.72 sec
        Start  20: testDistGeom
 17/142 Test  #20: testDistGeom .......................   Passed    0.24 sec
        Start  21: pyDistGeom
 18/142 Test   #6: pyBV ...............................   Passed   10.19 sec
        Start  22: graphmolTest1
 19/142 Test  #21: pyDistGeom .........................   Passed    1.32 sec
        Start  23: graphmolcpTest
 20/142 Test  #23: graphmolcpTest .....................   Passed    0.23 sec
        Start  24: graphmolqueryTest
 21/142 Test  #24: graphmolqueryTest ..................   Passed    0.28 sec
        Start  25: graphmolMolOpsTest
 22/142 Test  #19: pyForceFieldConstraints ............   Passed    5.27 sec
        Start  26: graphmoltestCanon
 23/142 Test  #26: graphmoltestCanon ..................   Passed    0.10 sec
        Start  27: graphmoltestChirality
 24/142 Test  #27: graphmoltestChirality ..............   Passed    0.46 sec
        Start  28: graphmoltestPickler
 25/142 Test  #28: graphmoltestPickler ................Child aborted***Exception:   2.07 sec
[11:46:06] -------------------------------------
[11:46:06] Testing String Pickle Roundtrips.
[11:46:06] 	done
[11:46:06] -------------------------------------
[11:46:06] Testing reading existing pickle file (v2).
[11:46:06] 	done
[11:46:06] -------------------------------------
[11:46:06] Testing combining molecules using pickles.
Atoms:
	0 6 C chg: 0  deg: 2 exp: 2 imp: 2 hyb: 4 arom?: 0 chi: 0
	1 6 C chg: 0  deg: 2 exp: 2 imp: 2 hyb: 4 arom?: 0 chi: 0
	2 6 C chg: 0  deg: 2 exp: 2 imp: 2 hyb: 4 arom?: 0 chi: 0
	3 6 C chg: 0  deg: 2 exp: 2 imp: 2 hyb: 4 arom?: 0 chi: 0
	4 6 C chg: 0  deg: 2 exp: 2 imp: 2 hyb: 4 arom?: 0 chi: 0
	5 8 O chg: 0  deg: 2 exp: 2 imp: 0 hyb: 4 arom?: 0 chi: 0
	6 6 C chg: 0  deg: 2 exp: 2 imp: 2 hyb: 4 arom?: 0 chi: 0
Bonds:
	0 0->1 order: 1 conj?: 0 aromatic?: 0
	1 1->2 order: 1 conj?: 0 aromatic?: 0
	2 2->0 order: 1 conj?: 0 aromatic?: 0
	3 3->4 order: 1 conj?: 0 aromatic?: 0
	4 4->5 order: 1 conj?: 0 aromatic?: 0
	5 5->6 order: 1 conj?: 0 aromatic?: 0
	6 6->3 order: 1 conj?: 0 aromatic?: 0
[11:46:06] 	done
[11:46:06] -------------------------------------
[11:46:06] Testing Issue164: Roundtrip Pickle Failure.
[11:46:07] 	done
[11:46:07] -------------------------------------
[11:46:07] Testing Issue219: Pickle Failure with Conformations.
[11:46:07] 	done
[11:46:07] -------------------------------------
[11:46:07] Testing Issue220: Pickle problems with bond stereochemistry.
[11:46:07] 	done
[11:46:07] -------------------------------------
[11:46:07] Testing query serialization.
[11:46:07] C=[$(C=O)]
[11:46:07] S(=O)(=O)-[C&H2]-,:[F,Br,I,Cl] S(=O)(=O)-[C&H2]-,:[F,Br,I,Cl]
[11:46:07] 	done
[11:46:07] -------------------------------------
[11:46:07] Testing radical handling in pickles.
[11:46:07] 	done
[11:46:07] -----------------------
[11:46:07] Testing pickling of properties
[11:46:07] 	done
[11:46:07] -------------------------------------
[11:46:07] Testing sf.net issue 2788233.
[11:46:07] 	done
[11:46:07] -------------------------------------
[11:46:07] Testing sf.net issue 3202580.
  mass! 13.0034
[11:46:07] 	done
[11:46:07] -------------------------------------
[11:46:07] Testing sf.net issue 3316407.
[11:46:07] 	done
[11:46:07] -------------------------------------
[11:46:07] Testing sf.net issue 3496759.
smi match: *C *C
smi match: **=* **=*
smi match: [N-]=[N+]=NC=O [N-]=[N+]=NC=O
smi match: *OS(=O)OC *OS(=O)OC
smi match: *S(=O)(=O)OC *S(=O)(=O)OC
smi match: O=COC=O O=COC=O
smi match: OO OO
smi match: O=COc1c(F)c(F)c(F)c(F)c1F O=COc1c(F)c(F)c(F)c(F)c1F
smi match: O=COc1ccc(N(=O)=O)cc1 O=COc1ccc(N(=O)=O)cc1
smi match: nnnOC=O nnnOC=O
smi match: *=C=N *=C=N
smi match: O=S(=O)(O)C(F)(F)F O=S(=O)(O)C(F)(F)F
smi match: S=[PH](S)S S=[PH](S)S
smi match: NP(N)(N)=O NP(N)(N)=O
smi match: cN=[N+]=[N-] cN=[N+]=[N-]
smi match: *CC=O *CC=O
smi match: NNC=O NNC=O
smi match: * *
smi match: C=P C=P
smi match: CC(=N)Cl CC(=N)Cl
smi match: N=O N=O
smi match: ** **
smi match: N=C=N N=C=N
smi match: [C-]#[NH+] [C-]#[NH+]
smi match: O=CON(C=O)C=O O=CON(C=O)C=O
smi match: N#CCO N#CCO
smi match: N#CC=O N#CC=O
smi match: N#C[SH](=O)=O N#C[SH](=O)=O
smi match: CCOP(=O)(C#N)OCC CCOP(=O)(C#N)OCC
smi match: N#CN=N N#CN=N
smi match: N=NCC=O N=NCC=O
smi match: CCCCCCC CCCCCCC
smi match: OCCOCCO OCCOCCO
smi match: SS SS
smi match: [SH] [SH]
smi match: *1CC1 *1CC1
smi match: Occc(O)cO Occc(O)cO
smi match: Occ(O)cO Occ(O)cO
smi match: N=NC(N)=S N=NC(N)=S
smi match: N#CS N#CS
smi match: cC[NH3+] cC[NH3+]
smi match: C*C=S C*C=S
smi match: N#CCN N#CCN
smi match: O=C1CCO1 O=C1CCO1
smi match: O=[PH](O)O[PH](=O)O O=[PH](O)O[PH](=O)O
smi match: O=C1CCN1 O=C1CCN1
smi match: O=C1C~CC(=O)C~C1 O=C1C~CC(=O)C~C1
smi match: C=CC=CC=CC=C C=CC=CC=CC=C
smi match: C1CCC(OC2CCC3CCCCC3C2)OC1 C1CCC(OC2CCC3CCCCC3C2)OC1
smi match: O=C1NCC2CCCCC12 O=C1NCC2CCCCC12
smi match: O=C1CCCC(=O)N1 O=C1CCCC(=O)N1
smi match: C1CCC(C2CCCO2)OC1 C1CCC(C2CCCO2)OC1
smi match: Oc1cc(O)c2c(c1)OC(c1ccc(O)c(O)c1)C(O)C2 Oc1cc(O)c2c(c1)OC(c1ccc(O)c(O)c1)C(O)C2
smi match: C1CC2CCC(O1)O2 C1CC2CCC(O1)O2
smi match: cN(=O)~O cN(=O)~O
smi match: *CN1C(=O)CCC1=O *CN1C(=O)CCC1=O
smi match: N~NC=O N~NC=O
smi match: *=N~C *=N~C
smi match: CO*(=O)=O CO*(=O)=O
smi match: * *
smi match: * *
smi match: *C=C *C=C
smi match: N#CS N#CS
smi match: *C=S *C=S
smi match: *N *N
smi match: *C(=C)C=O *C(=C)C=O
smi match: *C#C *C#C
smi match: N#CCO N#CCO
smi match: O=N(=O)CCO O=N(=O)CCO
smi match: N=CS N=CS
smi match: O=CNC(O)C=O O=CNC(O)C=O
smi match: C=C(C=O)C=O C=C(C=O)C=O
smi match: N=CC=O N=CC=O
smi match: *C(C=O)C=O *C(C=O)C=O
smi match: *C(C=O)=C(*)C=O *C(C=O)=C(*)C=O
smi match: O=CC=CC=O O=CC=CC=O
smi match: O=CN(O)C=O O=CN(O)C=O
smi match: O=CN(S)C=O O=CN(S)C=O
smi match: O=CNC=O O=CNC=O
smi match: O=CNN=O O=CNN=O
smi match: O=CNNC=O O=CNNC=O
smi match: O=CNOC=O O=CNOC=O
smi match: O=CS O=CS
smi match: O=CSC=S O=CSC=S
smi match: S=CS S=CS
smi match: C=O C=O
smi match: *C=N *C=N
smi match: CCCCCCC CCCCCCC
smi match: CN=O CN=O
smi match: CS(=O)(=O)O CS(=O)(=O)O
smi match: O=C1CCO1 O=C1CCO1
smi match: C=C(S)[SH]=O C=C(S)[SH]=O
smi match: C=CCO C=CCO
smi match: C=CC=N C=CC=N
smi match: C=CC=O C=CC=O
smi match: C=CC(=O)C=C C=CC(=O)C=C
smi match: C=CC=S C=CC=S
smi match: C=CC(=S)S C=CC(=S)S
smi match: *C=C(*)C=C *C=C(*)C=C
smi match: C=CC=N C=CC=N
smi match: *N(*)C=C *N(*)C=C
smi match: C=CN(=O)=O C=CN(=O)=O
smi match: C=CN(=O)O C=CN(=O)O
smi match: C=CO C=CO
smi match: C=COC=O C=COC=O
smi match: C=CS C=CS
smi match: C=C[SH](=O)=O C=C[SH](=O)=O
smi match: C=NCO C=NCO
smi match: C=NC=O C=NC=O
smi match: C=NN C=NN
smi match: C=NN=C C=NN=C
smi match: C=NO C=NO
smi match: C=NOC=O C=NOC=O
smi match: C=N=O C=N=O
smi match: N#CS N#CS
smi match: *CN=O *CN=O
smi match: NCN NCN
smi match: O=NCC=NO O=NCC=NO
smi match: NC(S)=N[SH](=O)=O NC(S)=N[SH](=O)=O
smi match: N=C(N)S N=C(N)S
smi match: NC(=O)Oc1ccccc1 NC(=O)Oc1ccccc1
smi match: NC=S NC=S
smi match: NC(N)=S NC(N)=S
smi match: C=CN C=CN
smi match: NOC=O NOC=O
smi match: C1CN1 C1CN1
smi match: O=C1NNNN1 O=C1NNNN1
smi match: N=C(N)C(=N)N N=C(N)C(=N)N
smi match: N=C(N)O N=C(N)O
smi match: N=C(N)C(=N)S N=C(N)C(=N)S
smi match: *C=N *C=N
smi match: N=CC=O N=CC=O
smi match: N=CS N=CS
smi match: N=C=N N=C=N
smi match: N=C=O N=C=O
smi match: N=C=S N=C=S
smi match: NOC(=O)O NOC(=O)O
smi match: *C(O)=S *C(O)=S
smi match: C=CO C=CO
smi match: ON=CC=NO ON=CC=NO
smi match: *C[SH](=O)=O *C[SH](=O)=O
smi match: O=[SH](=O)O O=[SH](=O)O
smi match: N#CS N#CS
smi match: C=C(S)S C=C(S)S
smi match: N=C(N)S N=C(N)S
smi match: N=C(S)S N=C(S)S
smi match: NC(=S)S NC(=S)S
smi match: O=CNS O=CNS
smi match: S S
smi match: [SiH4] [SiH4]
smi match: NS NS
smi match: NCN NCN
smi match: cC(c)(O)O cC(c)(O)O
smi match: *C(c)O *C(c)O
smi match: C=CS(c)(=O)=O C=CS(c)(=O)=O
smi match: cS(=O)(=O)O cS(=O)(=O)O
smi match: *c1ccccn1=O *c1ccccn1=O
smi match: *c1ccccn1 *c1ccccn1
smi match: *c1nccccn1 *c1nccccn1
smi match: C1COCOC1 C1COCOC1
smi match: C=S C=S
smi match: c=S c=S
smi match: S=CS S=CS
smi match: C=CN(=O)=O C=CN(=O)=O
smi match: C=CN(=O)O C=CN(=O)O
smi match: N=CC=O N=CC=O
smi match: C=CS C=CS
smi match: SC(S)(S)S SC(S)(S)S
smi match: OS(O)(O)O OS(O)(O)O
smi match: O=N(=O)C[SH](=O)=O O=N(=O)C[SH](=O)=O
smi match: O=N(O)C[SH](=O)=O O=N(O)C[SH](=O)=O
smi match: N#CS N#CS
smi match: C=NO C=NO
smi match: C=N[SH]=N C=N[SH]=N
smi match: O=C(S)S O=C(S)S
smi match: N=C(S)S N=C(S)S
smi match: N=C(=N)S N=C(=N)S
smi match: O=N=O O=N=O
smi match: O=NO O=NO
smi match: ONO ONO
smi match: C1SCS1 C1SCS1
smi match: N=C=S N=C=S
smi match: N=C=N N=C=N
smi match: C1N=N1 C1N=N1
smi match: *CS *CS
smi match: SC(S)=C(S)S SC(S)=C(S)S
smi match: N=CC=NO N=CC=NO
smi match: N#CCC#N N#CCC#N
smi match: CON=O CON=O
smi match: C=CN C=CN
smi match: C=N[SH](=O)=O C=N[SH](=O)=O
smi match: NN=O NN=O
smi match: NC(=O)S NC(=O)S
smi match: N#CS N#CS
smi match: NC(=O)C(N)=O NC(=O)C(N)=O
smi match: c=N c=N
smi match: C1COCO1 C1COCO1
smi match: C=NN[SH](=O)=O C=NN[SH](=O)=O
smi match: O=CC=O O=CC=O
smi match: O=CNOC=O O=CNOC=O
smi match: O=C1C=CC(=O)C=C1 O=C1C=CC(=O)C=C1
smi match: ONO ONO
smi match: ON(~O)~O ON(~O)~O
smi match: OC1COC(O)C1 OC1COC(O)C1
smi match: OC1CCOC1O OC1CCOC1O
smi match: OC1CCOC(O)C1 OC1CCOC(O)C1
smi match: N=[N+]=N N=[N+]=N
smi match: N#CN N#CN
smi match: C=NN=C C=NN=C
smi match: *CCN(C)C *CCN(C)C
smi match: CNN CNN
smi match: *CC *CC
smi match: OCS OCS
smi match: C1NO1 C1NO1
smi match: COS(C)(=O)=O COS(C)(=O)=O
smi match: C1CO1 C1CO1
smi match: *c1-c-c-ccN1 *c1-c-c-ccN1
smi match: *C(*)=C *C(*)=C
smi match: N#[NH+] N#[NH+]
smi match: C#NO C#NO
smi match: OOO OOO
smi match: OO OO
smi match: O~Cl(~O)~O O~Cl(~O)~O
smi match: O~Cl(~O)(~O)~O O~Cl(~O)(~O)~O
smi match: [OH]~C(~O)~O [OH]~C(~O)~O
smi match: *N *N
smi match: *P *P
smi match: *S *S
smi match: *C(*)(*)C=C *C(*)(*)C=C
smi match: *C(*)(*)C=C *C(*)(*)C=C
smi match: *C(*)C=C *C(*)C=C
smi match: *CC=C *CC=C
smi match: CN=C=O CN=C=O
smi match: CN=C=S CN=C=S
smi match: *C=O *C=O
smi match: N=N N=N
smi match: SS SS
smi match: O=C1CCNC(=O)O1 O=C1CCNC(=O)O1
smi match: CSC(C)=N CSC(C)=N
smi match: COC(C)=N COC(C)=N
smi match: C=C=C C=C=C
smi match: *C(=O)OC=O *C(=O)OC=O
smi match: C=CC#N C=CC#N
smi match: C=CC=O C=CC=O
smi match: CC=CC(C)=O CC=CC(C)=O
smi match: CC=CC(=O)OCC CC=CC(=O)OCC
smi match: C#CC#N C#CC#N
smi match: C#CC=O C#CC=O
smi match: C#CC(=O)OCC C#CC(=O)OCC
smi match: C#CC=O C#CC=O
smi match: *C(=O)C#C *C(=O)C#C
smi match: C=CC=O C=CC=O
smi match: *C(*)(*)O *C(*)(*)O
smi match: COS(=O)(=O)O COS(=O)(=O)O
smi match: CS(=O)(=O)[O-] CS(=O)(=O)[O-]
smi match: NS(=O)(=O)[O-] NS(=O)(=O)[O-]
smi match: *C(*)(*)C=O *C(*)(*)C=O
smi match: *C(*)(*)C=O *C(*)(*)C=O
smi match: *C(*)C=O *C(*)C=O
smi match: *CC=O *CC=O
smi match: *C(*)(*)[SH](=O)=O *C(*)(*)[SH](=O)=O
smi match: *C(*)(*)[SH](=O)=O *C(*)(*)[SH](=O)=O
smi match: *C(*)[SH](=O)=O *C(*)[SH](=O)=O
smi match: *C[SH](=O)=O *C[SH](=O)=O
smi match: * *
smi match: *1CC1 *1CC1
smi match: O=COC=O O=COC=O
smi match: N=C=O N=C=O
smi match: N=C=S N=C=S
smi match: O~O O~O
smi match: N~[SiH4] N~[SiH4]
smi match: *P *P
smi match: C=N=N C=N=N
smi match: *N#[NH+] *N#[NH+]
smi match: *S* *S*
smi match: ** **
smi match: *CC* *CC*
smi match: *O[SiH3] *O[SiH3]
smi match: *OS(*)~O *OS(*)~O
smi match: N~N~O N~N~O
smi match: *N(~O)(~O)~O *N(~O)(~O)~O
smi match: *[N+](=C)[O-] *[N+](=C)[O-]
smi match: * *
smi match: *C(*)NCN(*)* *C(*)NCN(*)*
smi match: *OCC#N *OCC#N
smi match: **C=C **C=C
smi match: C=C[O-] C=C[O-]
smi match: C=CO C=CO
smi match: * *
smi match: O=CON1C(=O)CCC1=O O=CON1C(=O)CCC1=O
smi match: O=COn1ccnc1 O=COn1ccnc1
smi match: O=COc1c(F)c(F)c(F)c(F)c1F O=COc1c(F)c(F)c(F)c(F)c1F
smi match: CC(C)(C)S CC(C)(C)S
smi match: [CH2][CH]~[CH]~[CH]~[CH]~[CH]~[CH]~[CH]~[CH]~[CH]~[CH]~C [CH2][CH]~[CH]~[CH]~[CH]~[CH]~[CH]~[CH]~[CH]~[CH]~[CH]~C
smi match: [CH]=O [CH]=O
smi match: C~[CH2]~[CH2]~[CH2]~[CH2]~[CH2]~C C~[CH2]~[CH2]~[CH2]~[CH2]~[CH2]~C
smi match: SS SS
smi match: [SH] [SH]
smi match: *C* *C*
smi match: * *
smi match: C[nH3+] C[nH3+]
smi match: cC(=N)N cC(=N)N
smi match: O=CNO O=CNO
smi match: NN NN
smi match: * *
smi match: *O[PH](=O)O* *O[PH](=O)O*
smi match: * *
smi match: * *
smi match: * *
smi match: *N=C(*)* *N=C(*)*
smi match: *C(*)(*)C=O *C(*)(*)C=O
smi match: CSC=O CSC=O
smi match: * *
smi match: O=CCl O=CCl
smi match: *** ***
smi match: *C=O *C=O
smi match: CO CO
smi match: CO CO
smi match: CO CO
smi match: CO CO
smi match: CC=O CC=O
smi match: *=* *=*
smi match: *C *C
smi match: C#C C#C
smi match: *[CH]C=C *[CH]C=C
smi match: cCC(=O)O cCC(=O)O
smi match: *C(*)(*)C(=O)O *C(*)(*)C(=O)O
smi match: CC(=O)C(=O)O CC(=O)C(=O)O
smi match: C=CC(=O)O C=CC(=O)O
smi match: N#CC(=O)O N#CC(=O)O
smi match: O=C(O)CN(~O)~O O=C(O)CN(~O)~O
smi match: *N(*)C*=O *N(*)C*=O
smi match: O=*CO O=*CO
smi match: *=C*=O *=C*=O
smi match: *=CC#N *=CC#N
smi match: *CO *CO
smi match: ** **
smi match: *CO *CO
smi match: *C(*)=O *C(*)=O
smi match: * *
smi match: *CC(=O)O *CC(=O)O
smi match: CC(=O)OC(C)=O CC(=O)OC(C)=O
smi match: *c *c
smi match: cN(C)C cN(C)C
smi match: c c
smi match: *c *c
smi match: *c *c
smi match: **:*cF **:*cF
smi match: cB(O)O cB(O)O
smi match: N~N~N N~N~N
smi match: *N=N* *N=N*
smi match: *CCO *CCO
smi match: *CCO *CCO
smi match: *=CCC(=O)O *=CCC(=O)O
smi match: O=C(O)CCO O=C(O)CCO
smi match: *CCC(=O)O *CCC(=O)O
smi match: CC(=O)CC(=O)O CC(=O)CC(=O)O
smi match: *OC(=O)CC(C)=O *OC(=O)CC(C)=O
smi match: *OC(*)=O *OC(*)=O
smi match: *C(=O)O *C(=O)O
smi match: O=CO O=CO
smi match: *OC(=O)O* *OC(=O)O*
smi match: * *
smi match: *OC(=O)Cl *OC(=O)Cl
smi match: *C#N *C#N
smi match: NCC(=O)NCC=O NCC(=O)NCC=O
smi match: SS SS
smi match: * *
smi match: *=* *=*
smi match: *=* *=*
smi match: *=* *=*
smi match: *=* *=*
smi match: C1CO1 C1CO1
smi match: *OC(*)=O *OC(*)=O
smi match: * *
smi match: *O*O *O*O
smi match: COC(C)(C)O COC(C)(C)O
smi match: *O *O
smi match: ** **
smi match: C=NN C=NN
smi match: C=NC=O C=NC=O
smi match: * *
smi match: C#NC C#NC
smi match: CN=C=O CN=C=O
smi match: CN=C=S CN=C=S
smi match: *OC(*)(*)O* *OC(*)(*)O*
smi match: *C(*)=O *C(*)=O
smi match: C~C~C~C~C~C~C C~C~C~C~C~C~C
smi match: *~*=O *~*=O
smi match: *~*=O *~*=O
smi match: O=C(O)CC(=O)O O=C(O)CC(=O)O
smi match: * *
smi match: *C#N *C#N
smi match: *N(=O)~O *N(=O)~O
smi match: N N
smi match: O=C(O)C(=O)O O=C(O)C(=O)O
smi match: C=NO C=NO
smi match: O~O O~O
smi match: cO cO
smi match: O=P(~[OH])~O O=P(~[OH])~O
smi match: CO~P(=O)~O CO~P(=O)~O
smi match: O=P(~[OH])(~O)~O O=P(~[OH])(~O)~O
smi match: CO~P(=O)(~O)~O CO~P(=O)(~O)~O
smi match: O=P(~O)~O O=P(~O)~O
smi match: O=P(~O)(~O)~O O=P(~O)(~O)~O
smi match: CN CN
smi match: O~*1~**~*(~O)~**~1 O~*1~**~*(~O)~**~1
smi match: * *
smi match: *1~*~*~C2~C(~*~1)~*~*~C1~C3~*~*~*~C~3~*~*~C~2~1 *1~*~*~C2~C(~*~1)~*~*~C1~C3~*~*~*~C~3~*~*~C~2~1
smi match: CS(C)~O CS(C)~O
smi match: CS(C)(~O)~O CS(C)(~O)~O
smi match: CS(N)(~O)~O CS(N)(~O)~O
smi match: CS(O)(~O)~O CS(O)(~O)~O
smi match: COS(C)(~O)~O COS(C)(~O)~O
smi match: *S(C)(~O)~O *S(C)(~O)~O
smi match: CN(C)C CN(C)C
smi match: *c1nnc(=N)s1 *c1nnc(=N)s1
smi match: *C(*)=S *C(*)=S
smi match: *OC(*)=S *OC(*)=S
smi match: * *
smi match: CS CS
smi match: cS cS
smi match: NC(N)=S NC(N)=S
smi match: * *
smi match: ***** *****
smi match: NC(N)=O NC(N)=O
[11:46:08] 	done
[11:46:08] -------------------------------------
[11:46:08] Testing sf.net issue 280.
[11:46:08] 	done
[11:46:08] -------------------------------------
[11:46:08] Testing sf.net issue 285.
[11:46:08] 	done
[11:46:08] -----------------------
[11:46:08] Testing residue information handling on atoms
[11:46:08] 	done
[11:46:08] -----------------------
[11:46:08] Testing Github issue 149: cannot pickle unsanitized molecules
[11:46:08] 	done
[11:46:08] -----------------------
[11:46:08] Testing Github issue 713: Molecule serialization doesn't read/write atomic numbers above 128
[11:46:08] 	done
[11:46:08] -----------------------
[11:46:08] Testing Github 1563: Add a canned Atom query for heavy atom degree
[11:46:08] 	done
[11:46:08] -----------------------
[11:46:08] Testing Github 1710: bonds that are STEREOCIS or STEREOTRANS cannot be depickled
[11:46:08] 	done
[11:46:08] -----------------------
[11:46:08] Testing Github 1999: pickling atom map numbers >127 gives negative values
terminate called after throwing an instance of 'RDKit::MolPicklerException'
  what():  std::exception

        Start  29: graphmoltestPicklerGlobalSetting
 26/142 Test  #29: graphmoltestPicklerGlobalSetting ...   Passed    0.24 sec
        Start  30: graphmolIterTest
 27/142 Test  #30: graphmolIterTest ...................   Passed    0.17 sec
        Start  31: hanoiTest
 28/142 Test  #25: graphmolMolOpsTest .................   Passed   13.94 sec
        Start  32: graphmolMemTest1
 29/142 Test  #32: graphmolMemTest1 ...................   Passed    0.09 sec
        Start  33: resMolSupplierTest
 30/142 Test  #33: resMolSupplierTest .................   Passed    5.15 sec
        Start  34: molBundleTest
 31/142 Test  #34: molBundleTest ......................   Passed    0.20 sec
        Start  35: test-valgrind
 32/142 Test  #35: test-valgrind ......................   Passed    0.19 sec
        Start  36: graphmolTestsCatch
 33/142 Test  #36: graphmolTestsCatch .................   Passed    0.34 sec
        Start  37: testDepictor
 34/142 Test  #37: testDepictor .......................   Passed    2.36 sec
        Start  38: pyDepictor
 35/142 Test  #38: pyDepictor .........................   Passed    2.76 sec
        Start  39: smiTest1
 36/142 Test  #39: smiTest1 ...........................   Passed    0.32 sec
        Start  40: smiTest2
 37/142 Test  #40: smiTest2 ...........................   Passed    0.07 sec
        Start  41: cxsmilesTest
 38/142 Test  #41: cxsmilesTest .......................   Passed    0.23 sec
        Start  42: smaTest1
 39/142 Test  #42: smaTest1 ...........................   Passed    1.39 sec
        Start  43: smiTestCatch
 40/142 Test  #43: smiTestCatch .......................   Passed    0.31 sec
        Start  44: fileParsersTest1
 41/142 Test  #44: fileParsersTest1 ...................   Passed    0.36 sec
        Start  45: testMolSupplier
 42/142 Test  #45: testMolSupplier ....................   Passed    1.29 sec
        Start  46: testMolWriter
 43/142 Test  #46: testMolWriter ......................   Passed    2.14 sec
        Start  47: testTplParser
 44/142 Test  #47: testTplParser ......................   Passed    0.23 sec
        Start  48: testMol2ToMol
 45/142 Test  #48: testMol2ToMol ......................   Passed    0.34 sec
        Start  49: testSequence
 46/142 Test  #49: testSequence .......................   Passed    0.31 sec
        Start  50: testExtendedStereoParsing
 47/142 Test  #50: testExtendedStereoParsing ..........   Passed    0.21 sec
        Start  51: fileParsersCatchTest
 48/142 Test  #51: fileParsersCatchTest ...............   Passed    0.32 sec
        Start  52: testSubstructMatch
 49/142 Test  #52: testSubstructMatch .................   Passed    3.44 sec
        Start  53: testReaction
 50/142 Test  #53: testReaction .......................   Passed    1.81 sec
        Start  54: testReactionFingerprints
 51/142 Test  #54: testReactionFingerprints ...........   Passed    0.35 sec
        Start  55: testEnumeration
 52/142 Test  #31: hanoiTest ..........................   Passed  207.89 sec
        Start  56: rxnTestCatch
 53/142 Test  #56: rxnTestCatch .......................   Passed    1.53 sec
        Start  57: pyChemReactions
 54/142 Test  #57: pyChemReactions ....................   Passed   12.28 sec
        Start  58: pyChemReactionEnumerations
 55/142 Test  #58: pyChemReactionEnumerations .........   Passed   25.88 sec
        Start  59: pyChemReactionSanitize
 56/142 Test  #59: pyChemReactionSanitize .............   Passed    2.19 sec
        Start  60: testChemTransforms
 57/142 Test  #18: testMMFFForceField .................   Passed  261.20 sec
        Start  61: testSubgraphs1
 58/142 Test  #60: testChemTransforms .................   Passed    1.14 sec
        Start  62: testSubgraphs2
 59/142 Test  #62: testSubgraphs2 .....................   Passed    1.33 sec
        Start  63: filterCatalogTest
 60/142 Test  #61: testSubgraphs1 .....................   Passed    3.12 sec
        Start  64: pyFilterCatalog
 61/142 Test  #63: filterCatalogTest ..................   Passed    3.29 sec
        Start  65: testFragCatalog
 62/142 Test  #55: testEnumeration ....................   Passed  228.39 sec
        Start  66: pyFragCatalog
 63/142 Test  #65: testFragCatalog ....................   Passed    8.65 sec
        Start  67: testDescriptors
 64/142 Test  #66: pyFragCatalog ......................   Passed    4.95 sec
        Start  68: testAUTOCORR2D
 65/142 Test  #68: testAUTOCORR2D .....................   Passed    3.80 sec
        Start  69: pyMolDescriptors
 66/142 Test  #64: pyFilterCatalog ....................   Passed   20.02 sec
        Start  70: pyMolDescriptors3D
 67/142 Test  #70: pyMolDescriptors3D .................   Passed    2.59 sec
        Start  71: testFingerprints
 68/142 Test  #69: pyMolDescriptors ...................   Passed    7.73 sec
        Start  72: testFingerprintGenerators
 69/142 Test  #72: testFingerprintGenerators ..........   Passed   12.19 sec
        Start  73: pyTestGenerator
 70/142 Test  #73: pyTestGenerator ....................   Passed    3.21 sec
        Start  74: testPartialCharges
 71/142 Test  #74: testPartialCharges .................   Passed    0.78 sec
        Start  75: pyPartialCharges
 72/142 Test  #75: pyPartialCharges ...................   Passed    5.23 sec
        Start  76: testMolTransforms
 73/142 Test  #76: testMolTransforms ..................   Passed    0.91 sec
        Start  77: pyMolTransforms
 74/142 Test  #67: testDescriptors ....................   Passed   37.85 sec
        Start  78: testMMFFForceFieldHelpers
 75/142 Test  #77: pyMolTransforms ....................   Passed    2.32 sec
        Start  79: testUFFForceFieldHelpers
 76/142 Test  #71: testFingerprints ...................   Passed   81.75 sec
        Start  80: testCrystalForceField
 77/142 Test  #80: testCrystalForceField ..............   Passed    0.86 sec
        Start  81: pyForceFieldHelpers
 78/142 Test  #81: pyForceFieldHelpers ................   Passed    4.46 sec
        Start  82: testDistGeomHelpers
 79/142 Test  #78: testMMFFForceFieldHelpers ..........   Passed  236.24 sec
        Start  83: pyDistGeomHelpers
 80/142 Test  #79: testUFFForceFieldHelpers ...........   Passed  265.11 sec
        Start  84: testMolAlign
 81/142 Test  #22: graphmolTest1 ......................   Passed  857.16 sec
        Start  85: pyMolAlign
 82/142 Test  #83: pyDistGeomHelpers ..................   Passed  351.79 sec
        Start  86: testFeatures
 83/142 Test  #86: testFeatures .......................   Passed    0.33 sec
        Start  87: pyChemicalFeatures
 84/142 Test  #87: pyChemicalFeatures .................   Passed    1.27 sec
        Start  88: testShapeHelpers
 85/142 Test  #88: testShapeHelpers ...................   Passed    0.33 sec
        Start  89: pyShapeHelpers
 86/142 Test  #89: pyShapeHelpers .....................   Passed    3.12 sec
        Start  90: testMolCatalog
 87/142 Test  #90: testMolCatalog .....................   Passed    0.39 sec
        Start  91: pyMolCatalog
 88/142 Test  #91: pyMolCatalog .......................   Passed    2.22 sec
        Start  92: moldraw2DTest1
 89/142 Test  #92: moldraw2DTest1 .....................   Passed   16.46 sec
        Start  93: moldraw2DRxnTest1
 90/142 Test  #93: moldraw2DRxnTest1 ..................   Passed    0.62 sec
        Start  94: pyMolDraw2D
 91/142 Test  #94: pyMolDraw2D ........................   Passed    2.68 sec
        Start  95: testFMCS
 92/142 Test  #95: testFMCS ...........................   Passed    6.88 sec
        Start  96: pyFMCS
 93/142 Test  #96: pyFMCS .............................   Passed    8.84 sec
        Start  97: FMCStest
 94/142 Test  #97: FMCStest ...........................   Passed    0.16 sec
        Start  98: testMolHash
 95/142 Test  #98: testMolHash ........................   Passed    0.56 sec
        Start  99: pyMolHash
 96/142 Test  #99: pyMolHash ..........................   Passed    1.03 sec
        Start 100: testMMPA
 97/142 Test #100: testMMPA ...........................   Passed    0.86 sec
        Start 101: pyMMPA
 98/142 Test #101: pyMMPA .............................   Passed   10.44 sec
        Start 102: testStructChecker
 99/142 Test #102: testStructChecker ..................   Passed    1.01 sec
        Start 103: pyStructChecker
100/142 Test #103: pyStructChecker ....................   Passed    1.39 sec
        Start 104: testReducedGraphs
101/142 Test #104: testReducedGraphs ..................   Passed    0.47 sec
        Start 105: pyReducedGraphs
102/142 Test #105: pyReducedGraphs ....................   Passed    1.71 sec
        Start 106: trajectoryTest
103/142 Test  #85: pyMolAlign .........................   Passed  105.60 sec
        Start 107: substructLibraryTest
104/142 Test #106: trajectoryTest .....................   Passed    4.69 sec
        Start 108: pySubstructLibrary
105/142 Test #107: substructLibraryTest ...............   Passed    2.32 sec
        Start 109: testRGroupDecomp
106/142 Test #109: testRGroupDecomp ...................   Passed    1.53 sec
        Start 110: pyRGroupDecomposition
107/142 Test #110: pyRGroupDecomposition ..............   Passed    3.02 sec
        Start 111: molInterchangeTest1
108/142 Test #111: molInterchangeTest1 ................   Passed    0.51 sec
        Start 112: pyMolInterchange
109/142 Test #112: pyMolInterchange ...................   Passed    2.00 sec
        Start 113: testSLNParse
110/142 Test #113: testSLNParse .......................   Passed    0.51 sec
        Start 114: pySLNParse
111/142 Test #114: pySLNParse .........................   Passed    1.53 sec
        Start 115: pyGraphMolWrap
112/142 Test #108: pySubstructLibrary .................   Passed   16.47 sec
        Start 116: pyTestConformerWrap
113/142 Test #116: pyTestConformerWrap ................   Passed    2.30 sec
        Start 117: pyTestTrajectory
114/142 Test #117: pyTestTrajectory ...................   Passed    7.42 sec
        Start 118: pyTestThreads
115/142 Test #118: pyTestThreads ......................   Passed    7.09 sec
        Start 119: molStandardizeTest
116/142 Test #119: molStandardizeTest .................   Passed    4.28 sec
        Start 120: molNormalizeTest
117/142 Test #120: molNormalizeTest ...................   Passed    0.58 sec
        Start 121: molValidateTest
118/142 Test #121: molValidateTest ....................   Passed    0.78 sec
        Start 122: molChargeTest
119/142 Test #122: molChargeTest ......................   Passed    2.51 sec
        Start 123: molTautomerTest
120/142 Test #123: molTautomerTest ....................   Passed   13.80 sec
        Start 124: molStandardizeSmallTest
121/142 Test #124: molStandardizeSmallTest ............   Passed    0.86 sec
        Start 125: molFragmentTest
122/142 Test #125: molFragmentTest ....................   Passed    1.40 sec
        Start 126: pyMolStandardize
123/142 Test #126: pyMolStandardize ...................   Passed    2.95 sec
        Start 127: testQuery
124/142 Test #127: testQuery ..........................   Passed    0.09 sec
        Start 128: testMatCalc
125/142 Test #128: testMatCalc ........................   Passed    0.05 sec
        Start 129: pyMatCalc
126/142 Test #129: pyMatCalc ..........................   Passed    5.20 sec
        Start 130: testSimDivPickers
127/142 Test #130: testSimDivPickers ..................   Passed    0.18 sec
        Start 131: pySimDivPickers
128/142 Test #131: pySimDivPickers ....................   Passed    3.23 sec
        Start 132: pyRanker
129/142 Test #132: pyRanker ...........................   Passed    1.21 sec
        Start 133: testChemicalFeatures
130/142 Test #133: testChemicalFeatures ...............   Passed    0.06 sec
        Start 134: pyFeatures
131/142 Test #134: pyFeatures .........................   Passed    1.14 sec
        Start 135: pythonTestDbCLI
132/142 Test #115: pyGraphMolWrap .....................   Passed  111.74 sec
        Start 136: pythonTestDirML
133/142 Test #136: pythonTestDirML ....................   Passed  104.31 sec
        Start 137: pythonTestDirDataStructs
134/142 Test #137: pythonTestDirDataStructs ...........   Passed    6.01 sec
        Start 138: pythonTestDirDbase
135/142 Test #135: pythonTestDbCLI ....................   Passed  169.47 sec
        Start 139: pythonTestDirSimDivFilters
136/142 Test #138: pythonTestDirDbase .................   Passed   10.69 sec
        Start 140: pythonTestDirVLib
137/142 Test #139: pythonTestDirSimDivFilters .........   Passed    2.50 sec
        Start 141: pythonTestDirChem
138/142 Test #140: pythonTestDirVLib ..................   Passed    4.06 sec
        Start 142: pythonTestSping
139/142 Test #142: pythonTestSping ....................   Passed    3.15 sec
140/142 Test  #82: testDistGeomHelpers ................   Passed  911.64 sec
141/142 Test  #84: testMolAlign .......................   Passed  755.93 sec
142/142 Test #141: pythonTestDirChem ..................***Failed  690.38 sec
......
----------------------------------------------------------------------
Ran 6 tests in 0.742s

OK
......
----------------------------------------------------------------------
Ran 6 tests in 0.348s

OK
....[12:06:16] 

****
Pre-condition Violation
valence not defined for atoms not associated with molecules
Violation occurred on line 266 in file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.cpp
Failed Expression: dp_mol
****

.
----------------------------------------------------------------------
Ran 5 tests in 0.089s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 0.083s

OK
..
----------------------------------------------------------------------
Ran 2 tests in 0.133s

OK
......................
----------------------------------------------------------------------
Ran 22 tests in 0.238s

OK
.....s.................ss
----------------------------------------------------------------------
Ran 25 tests in 0.919s

OK (skipped=3)
..s
----------------------------------------------------------------------
Ran 3 tests in 1.176s

OK (skipped=1)
..............................F....
======================================================================
FAIL: test_timeout (__main__.TestTimeout)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "UnitTestMCS.py", line 331, in test_timeout
    self.assertTrue(t2 - t1 < 2, t2 - t1)
AssertionError: 5.77509689331

----------------------------------------------------------------------
Ran 35 tests in 5.932s

FAILED (failures=1)
....
----------------------------------------------------------------------
Ran 4 tests in 0.167s

OK
.
----------------------------------------------------------------------
Ran 1 test in 0.096s

OK
.......
----------------------------------------------------------------------
Ran 7 tests in 0.316s

OK
...
----------------------------------------------------------------------
Ran 3 tests in 0.369s

OK
.ss.ss.......
----------------------------------------------------------------------
Ran 13 tests in 8.477s

OK (skipped=4)
........F...[12:10:18] WARNING: More than one matching pattern found - picking one
[12:10:18] WARNING: More than one matching pattern found - picking one
.[12:10:18] WARNING: More than one matching pattern found - picking one
..
======================================================================
FAIL: testEnumerateStereoisomersRandomSamplingShouldBeDeterministicAndPortable (__main__.TestCase)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "UnitTestMol3D.py", line 218, in testEnumerateStereoisomersRandomSamplingShouldBeDeterministicAndPortable
    self.assertEqual(smiles, expected)
AssertionError: Items in the first set but not the second:
'C/C(F)=C/[C@@H](Cl)/C=C(\\Br)[C@@H](N)I'
'C/C(F)=C\\[C@H](Cl)/C=C(\\Br)[C@@H](N)I'
Items in the second set but not the first:
'C/C(F)=C/[C@@H](Cl)/C=C(/Br)[C@@H](N)I'
'C/C(F)=C/[C@H](Cl)/C=C(\\Br)[C@H](N)I'

----------------------------------------------------------------------
Ran 15 tests in 213.020s

FAILED (failures=1)
........
----------------------------------------------------------------------
Ran 8 tests in 0.948s

OK
....[12:10:46] WARNING: not removing hydrogen atom without neighbors
[12:10:46] WARNING: not removing hydrogen atom without neighbors
[12:10:46] WARNING: not removing hydrogen atom without neighbors
.......
----------------------------------------------------------------------
Ran 11 tests in 24.918s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 8.690s

OK
......
----------------------------------------------------------------------
Ran 6 tests in 2.644s

OK
...............s/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/rdkit/Chem/PandasTools.py:394: FutureWarning: Conversion of the second argument of issubdtype from `float` to `np.floating` is deprecated. In future, it will be treated as `np.float64 == np.dtype(float).type`.
  if (np.issubdtype(df.dtypes[dt], float) or np.issubdtype(df.dtypes[dt], int))
/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/rdkit/Chem/PandasTools.py:394: FutureWarning: Conversion of the second argument of issubdtype from `int` to `np.signedinteger` is deprecated. In future, it will be treated as `np.int32 == np.dtype(int).type`.
  if (np.issubdtype(df.dtypes[dt], float) or np.issubdtype(df.dtypes[dt], int))
./<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/rdkit/Chem/PandasTools.py:414: FutureWarning: Conversion of the second argument of issubdtype from `float` to `np.floating` is deprecated. In future, it will be treated as `np.float64 == np.dtype(float).type`.
  if np.issubdtype(type(cell_value), float):
.......
----------------------------------------------------------------------
Ran 24 tests in 25.077s

OK (skipped=1)
..
----------------------------------------------------------------------
Ran 2 tests in 0.001s

OK
UnitTestDocTestsChem.py:5: DeprecationWarning: The rdkit.Chem.MCS module is deprecated; please use rdkit.Chem.rdFMCS instead.
  from rdkit.Chem import MCS, FragmentMatcher, MACCSkeys, Descriptors, TemplateAlign
F./<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/rdkit/Chem/MCS.py:1: DeprecationWarning: The rdkit.Chem.MCS module is deprecated; please use rdkit.Chem.rdFMCS instead.
  # This work was funded by Roche and generously donated to the free
............[12:13:20] WARNING: More than one matching pattern found - picking one
[12:13:20] WARNING: More than one matching pattern found - picking one
...........
======================================================================
FAIL: EnumerateStereoisomers (rdkit.Chem.EnumerateStereoisomers)
Doctest: rdkit.Chem.EnumerateStereoisomers.EnumerateStereoisomers
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/usr/lib/python2.7/doctest.py", line 2226, in runTest
    raise self.failureException(self.format_failure(new.getvalue()))
AssertionError: Failed doctest test for rdkit.Chem.EnumerateStereoisomers.EnumerateStereoisomers
  File "/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/rdkit/Chem/EnumerateStereoisomers.py", line 98, in EnumerateStereoisomers

----------------------------------------------------------------------
File "/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/rdkit/Chem/EnumerateStereoisomers.py", line 210, in rdkit.Chem.EnumerateStereoisomers.EnumerateStereoisomers
Failed example:
    for smi in sorted(Chem.MolToSmiles(x, isomericSmiles=True) for x in isomers):
        print(smi)
Expected:
    F[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)Br
    F[C@@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)Br
    F[C@H](Cl)[C@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)Br
Got:
    F[C@@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)Br
    F[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)[C@@H](Cl)Br
    F[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)Br


----------------------------------------------------------------------
Ran 25 tests in 104.961s

FAILED (failures=1)
..
----------------------------------------------------------------------
Ran 2 tests in 0.471s

OK
..s...
----------------------------------------------------------------------
Ran 6 tests in 6.934s

OK (skipped=1)
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.[12:13:33] WARNING: not removing hydrogen atom without neighbors
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......
----------------------------------------------------------------------
Ran 9 tests in 0.932s

OK
..................
----------------------------------------------------------------------
Ran 18 tests in 6.469s

OK
...
----------------------------------------------------------------------
Ran 3 tests in 0.635s

OK
........
----------------------------------------------------------------------
Ran 8 tests in 0.336s

OK
..
----------------------------------------------------------------------
Ran 2 tests in 0.162s

OK
..
----------------------------------------------------------------------
Ran 2 tests in 0.126s

OK
.
----------------------------------------------------------------------
Ran 1 test in 0.658s

OK
........
----------------------------------------------------------------------
Ran 8 tests in 0.010s

OK
...
----------------------------------------------------------------------
Ran 3 tests in 0.021s

OK
...
----------------------------------------------------------------------
Ran 3 tests in 0.012s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 0.032s

OK
.......
----------------------------------------------------------------------
Ran 7 tests in 0.111s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 0.129s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 26.032s

OK
..........
----------------------------------------------------------------------
Ran 10 tests in 0.658s

OK
.
----------------------------------------------------------------------
Ran 1 test in 0.001s

OK
..........
----------------------------------------------------------------------
Ran 10 tests in 0.023s

OK
.....
----------------------------------------------------------------------
Ran 5 tests in 0.618s

OK
.....................
----------------------------------------------------------------------
Ran 21 tests in 53.918s

OK
.
----------------------------------------------------------------------
Ran 1 test in 0.001s

OK
...[12:15:29] 

****
Pre-condition Violation
molecule has no conformers
Violation occurred on line 37 in file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/MolChemicalFeature.cpp
Failed Expression: dp_mol->getNumConformers()
****

.
----------------------------------------------------------------------
Ran 4 tests in 0.212s

OK
..
----------------------------------------------------------------------
Ran 2 tests in 108.095s

OK
..
----------------------------------------------------------------------
Ran 2 tests in 0.753s

OK
...
----------------------------------------------------------------------
Ran 3 tests in 0.123s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 0.146s

OK
.....[12:17:26] WARNING: not removing hydrogen atom without neighbors
[12:17:26] WARNING: not removing hydrogen atom without neighbors
[12:17:26] WARNING: not removing hydrogen atom without neighbors
[12:17:26] WARNING: not removing hydrogen atom without neighbors
[12:17:26] WARNING: not removing hydrogen atom without neighbors
[12:17:26] WARNING: not removing hydrogen atom without neighbors
[12:17:26] WARNING: not removing hydrogen atom without neighbors
[12:17:26] WARNING: not removing hydrogen atom without neighbors
[12:17:26] WARNING: not removing hydrogen atom without neighbors
[12:17:26] WARNING: not removing hydrogen atom without neighbors
[12:17:26] WARNING: not removing hydrogen atom without neighbors
[12:17:26] WARNING: not removing hydrogen atom without neighbors
[12:17:26] WARNING: not removing hydrogen atom without neighbors
[12:17:26] WARNING: not removing hydrogen atom without neighbors
[12:17:26] WARNING: not removing hydrogen atom without neighbors
[12:17:26] WARNING: not removing hydrogen atom without neighbors
[12:17:26] WARNING: not removing hydrogen atom without neighbors
[12:17:26] WARNING: not removing hydrogen atom without neighbors
[12:17:26] WARNING: not removing hydrogen atom without neighbors
.....
----------------------------------------------------------------------
Ran 10 tests in 2.299s

OK
ssssss.....s.....
----------------------------------------------------------------------
Ran 17 tests in 1.077s

OK (skipped=7)
s
----------------------------------------------------------------------
Ran 1 test in 0.001s

OK (skipped=1)
..........
----------------------------------------------------------------------
Ran 10 tests in 3.909s

OK
..[12:17:38] SMARTS Parse Error: syntax error for input: 'boromicacid'
[12:17:39] SMARTS Parse Error: syntax error for input: 'carboxylicacid,acidchlroide'
[12:17:39] SMARTS Parse Error: syntax error for input: 'carboxyliccaid,acidchloride'
[12:17:39] reaction has no reactants
[12:17:39] reaction has no products
[12:17:39] initialization failed
[12:17:39] reaction has no reactants
[12:17:39] reaction has no products
.
----------------------------------------------------------------------
Ran 3 tests in 0.192s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 0.094s

OK
!!! TEST FAILURE:  python UnitTestMCS.py {}
!!! TEST FAILURE:  python UnitTestMol3D.py {}
!!! TEST FAILURE:  python UnitTestDocTestsChem.py {}


99% tests passed, 2 tests failed out of 142

Total Test time (real) = 1909.42 sec

The following tests FAILED:
	 28 - graphmoltestPickler (Child aborted)
	141 - pythonTestDirChem (Failed)
Errors while running CTest
make[2]: *** [Makefile:144: test] Error 8
make[2]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
dh_auto_test: cd obj-arm-linux-gnueabihf && make -j4 test ARGS\+=-j4 returned exit code 2
make[1]: [debian/rules:106: override_dh_auto_test] Error 2 (ignored)
make[1]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg'
 fakeroot debian/rules binary-arch
dh binary-arch --with python2 --buildsystem=cmake --parallel
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	cd obj-arm-linux-gnueabihf && make -j4 install DESTDIR=/<<BUILDDIR>>/rdkit-201809.1\+dfsg/debian/tmp AM_UPDATE_INFO_DIR=no
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make -f CMakeFiles/Makefile2 all
make[2]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
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make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Numerics/CMakeFiles/testMatrices.dir/build.make Code/Numerics/CMakeFiles/testMatrices.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Catalogs/CMakeFiles/Catalogs.dir/build.make Code/Catalogs/CMakeFiles/Catalogs.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/Numerics/CMakeFiles/testMatrices.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  6%] Built target DataStructs
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/build.make Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/build
make -f Code/Query/CMakeFiles/testQuery.dir/build.make Code/Query/CMakeFiles/testQuery.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/Catalogs/CMakeFiles/Catalogs.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Query /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Query/CMakeFiles/testQuery.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  6%] Built target testMatrices
make -f Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/build.make Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/depend
[  6%] Built target Catalogs
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataManip/MetricMatrixCalc /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/DependInfo.cmake --color=
make -f Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/build.make Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/depend
[  7%] Built target EigenSolvers
make -f Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/depend
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Query/CMakeFiles/testQuery.dir/build.make Code/Query/CMakeFiles/testQuery.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataManip/MetricMatrixCalc/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/Query/CMakeFiles/testQuery.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/build.make Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/build
[  8%] Built target testQuery
make -f Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/build.make Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/Cluster/Murtagh /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/build.make Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  9%] Built target testMatCalc
make -f Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build.make Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/InfoTheory /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/InfoTheory /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/DependInfo.cmake --color=
[  9%] Built target SimDivPickers
make -f Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/build.make Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDBoost/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/build.make Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/build
[  9%] Built target rdMetricMatrixCalc
make -f Code/DataStructs/CMakeFiles/testDataStructs.dir/build.make Code/DataStructs/CMakeFiles/testDataStructs.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/testDataStructs.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build.make Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/build.make Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/DataStructs/CMakeFiles/testDataStructs.dir/build.make Code/DataStructs/CMakeFiles/testDataStructs.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/DataStructs/CMakeFiles/testDataStructs.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 10%] Built target InfoTheory
make -f Code/DataStructs/CMakeFiles/testFPB.dir/build.make Code/DataStructs/CMakeFiles/testFPB.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/testFPB.dir/DependInfo.cmake --color=
[ 10%] Built target Clustering
[ 11%] Built target testDataStructs
make -f Code/DataStructs/CMakeFiles/testMultiFPB.dir/build.make Code/DataStructs/CMakeFiles/testMultiFPB.dir/depend
make -f Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/build.make Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/testMultiFPB.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/DependInfo.cmake --color=
[ 11%] Built target rdBase
make -f Code/Geometry/CMakeFiles/RDGeometryLib.dir/build.make Code/Geometry/CMakeFiles/RDGeometryLib.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/RDGeometryLib.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/DataStructs/CMakeFiles/testFPB.dir/build.make Code/DataStructs/CMakeFiles/testFPB.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/DataStructs/CMakeFiles/testFPB.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/DataStructs/CMakeFiles/testMultiFPB.dir/build.make Code/DataStructs/CMakeFiles/testMultiFPB.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/DataStructs/CMakeFiles/testMultiFPB.dir/build'.
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make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/build.make Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Geometry/CMakeFiles/RDGeometryLib.dir/build.make Code/Geometry/CMakeFiles/RDGeometryLib.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/Geometry/CMakeFiles/RDGeometryLib.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 12%] Built target testFPB
make -f Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/DependInfo.cmake --color=
[ 13%] Built target testMultiFPB
make -f Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build.make Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/DependInfo.cmake --color=
[ 14%] Built target RDGeometryLib
make -f Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build.make Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/InfoTheory/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 16%] Built target cDataStructs
make -f Code/ML/Data/CMakeFiles/cQuantize.dir/build.make Code/ML/Data/CMakeFiles/cQuantize.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/Data /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/Data /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/Data/CMakeFiles/cQuantize.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build.make Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build
[ 17%] Built target testSimDivPickers
make -f Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ChemicalFeatures /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build.make Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ML/Data/CMakeFiles/cQuantize.dir/build.make Code/ML/Data/CMakeFiles/cQuantize.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/ML/Data/CMakeFiles/cQuantize.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/build
[ 18%] Built target rdSimDivPickers
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Geometry/CMakeFiles/testTransforms.dir/build.make Code/Geometry/CMakeFiles/testTransforms.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/testTransforms.dir/DependInfo.cmake --color=
[ 18%] Built target rdInfoTheory
make -f Code/Geometry/CMakeFiles/testGrid.dir/build.make Code/Geometry/CMakeFiles/testGrid.dir/depend
[ 18%] Built target cQuantize
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/testGrid.dir/DependInfo.cmake --color=
make -f Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build.make Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/DependInfo.cmake --color=
[ 18%] Built target ChemicalFeatures
make -f Code/Numerics/Alignment/CMakeFiles/Alignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/Alignment.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Alignment /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/CMakeFiles/Alignment.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Geometry/CMakeFiles/testTransforms.dir/build.make Code/Geometry/CMakeFiles/testTransforms.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/Geometry/CMakeFiles/testTransforms.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Geometry/CMakeFiles/testGrid.dir/build.make Code/Geometry/CMakeFiles/testGrid.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/Geometry/CMakeFiles/testGrid.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build.make Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 19%] Built target testTransforms
make -f Code/Numerics/Alignment/CMakeFiles/Alignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/Alignment.dir/build
make -f Code/GraphMol/CMakeFiles/GraphMol.dir/build.make Code/GraphMol/CMakeFiles/GraphMol.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/Numerics/Alignment/CMakeFiles/Alignment.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 19%] Built target testGrid
make -f Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ChemicalFeatures /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/GraphMol.dir/DependInfo.cmake --color=
[ 20%] Built target rdGeometry
[ 20%] Built target Alignment
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/depend
make -f Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build
make -f Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build.make Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Alignment /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Alignment/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/GraphMol.dir/build.make Code/GraphMol/CMakeFiles/GraphMol.dir/build
[ 20%] Built target testChemicalFeatures
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build.make Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/CMakeFiles/GraphMol.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 20%] Built target testAlignment
[ 25%] Built target GraphMol
make -f Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/depend
make -f Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/depend
make -f Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Substruct /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/DependInfo.cmake --color=
[ 25%] Built target rdAlignment
make -f Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolTransforms /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 25%] Built target Trajectory
make -f Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/depend
[ 25%] Built target SubstructMatch
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/DependInfo.cmake --color=
make -f Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PartialCharges /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/DependInfo.cmake --color=
[ 25%] Built target MolTransforms
[ 27%] Built target SmilesParse
make -f Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/depend
make -f Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolInterchange /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolInterchange/CMakeFiles/MolInterchange.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 27%] Built target Subgraphs
make -f Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/depend
[ 27%] Built target PartialCharges
make -f Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/DependInfo.cmake --color=
[ 28%] Built target MolCatalog
make -f Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/DependInfo.cmake --color=
[ 28%] Built target MolInterchange
make -f Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build.make Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ChemicalFeatures/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 28%] Built target rdtrajectory
make -f Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/depend
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build.make Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build
[ 29%] Built target SLNParse
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Optimizer /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/DependInfo.cmake --color=
make -f Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 30%] Built target rdqueries
make -f Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/DependInfo.cmake --color=
[ 30%] Built target rdChemicalFeatures
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolcpTest.dir/depend
make -f Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolcpTest.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build'.
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make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build
[ 31%] Built target Optimizer
make -f Code/GraphMol/CMakeFiles/graphmoltestCanon.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestCanon.dir/depend
[ 32%] Built target Depictor
make -f Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build'.
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestCanon.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 33%] Built target graphmolqueryTest
make -f Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolIterTest.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolIterTest.dir/DependInfo.cmake --color=
[ 33%] Built target graphmolcpTest
make -f Code/GraphMol/CMakeFiles/test-valgrind.dir/build.make Code/GraphMol/CMakeFiles/test-valgrind.dir/depend
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmoltestCanon.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestCanon.dir/build
make -f Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/test-valgrind.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmoltestCanon.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 33%] Built target graphmoltestCanon
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/depend
make -f Code/GraphMol/CMakeFiles/test-valgrind.dir/build.make Code/GraphMol/CMakeFiles/test-valgrind.dir/build
[ 33%] Built target graphmolMemTest1
make -f Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/CMakeFiles/test-valgrind.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 34%] Built target graphmolIterTest
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build
make -f Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/build
[ 35%] Built target test-valgrind
make -f Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 35%] Built target smaTest1
make -f Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/depend
[ 36%] Built target ChemTransforms
make -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/DependInfo.cmake --color=
[ 37%] Built target smiTest2
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/DependInfo.cmake --color=
make -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 38%] Built target FilterCatalog
[ 39%] Built target testSubgraphs2
make -f Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/depend
make -f Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/depend
[ 39%] Built target testSubgraphs1
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PartialCharges /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/DependInfo.cmake --color=
make -f Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build.make Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PartialCharges/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/DependInfo.cmake --color=
[ 41%] Built target Fingerprints
make -f Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build.make Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolTransforms/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build.make Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build.make Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 41%] Built target testPartialCharges
make -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/DependInfo.cmake --color=
[ 42%] Built target rdPartialCharges
make -f Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/DependInfo.cmake --color=
[ 43%] Built target FragCatalog
make -f Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ReducedGraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/DependInfo.cmake --color=
[ 43%] Built target rdMolTransforms
make -f Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SubstructLibrary /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
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make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 44%] Built target MolChemicalFeatures
make -f Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/build.make Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolInterchange/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/DependInfo.cmake --color=
[ 45%] Built target ShapeHelpers
[ 45%] Built target ReducedGraphs
make -f Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/depend
make -f Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/build.make Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/DependInfo.cmake --color=
[ 46%] Built target SubstructLibrary
make -f Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/build.make Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolInterchange/Wrap/CMakeFiles/rdMolInterchange.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/build.make Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/build
[ 46%] Built target rdMolInterchange
make -f Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Optimizer /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/DependInfo.cmake --color=
[ 47%] Built target testSLNParse
make -f Code/ForceField/CMakeFiles/ForceField.dir/build.make Code/ForceField/CMakeFiles/ForceField.dir/depend
[ 48%] Built target rdSLNParse
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/CMakeFiles/ForceField.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/depend
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 50%] Built target rdchem
make -f Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build.make Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/depend
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ForceField/CMakeFiles/ForceField.dir/build.make Code/ForceField/CMakeFiles/ForceField.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/DependInfo.cmake --color=
[ 50%] Built target testOptimizer
make -f Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/ForceField/CMakeFiles/ForceField.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build.make Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build'.
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 54%] Built target ForceField
make -f Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 54%] Built target rdFingerprintGenerator
make -f Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/depend
[ 57%] Built target FileParsers
make -f Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ReducedGraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ReducedGraphs/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build
[ 58%] Built target rdMolChemicalFeatures
make -f Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build'.
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SubstructLibrary /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/build
[ 58%] Built target rdShapeHelpers
make -f Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SubstructLibrary/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build'.
[ 58%] Built target testReducedGraphs
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolInterchange /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/DependInfo.cmake --color=
[ 58%] Built target rdReducedGraphs
make -f Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/depend
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/DependInfo.cmake --color=
[ 58%] Built target substructLibraryTest
make -f Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/build.make Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolInterchange/CMakeFiles/molInterchangeTest1.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 58%] Built target rdSubstructLibrary
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build
make -f Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/DependInfo.cmake --color=
[ 58%] Built target molInterchangeTest1
make -f Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/depend
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/build
[ 61%] Built target rdmolfiles
[ 61%] Built target ForceFieldHelpers
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/depend
make -f Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 61%] Built target graphmolMolOpsTest
make -f Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 61%] Built target graphmolTestsCatch
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/molBundleTest.dir/build.make Code/GraphMol/CMakeFiles/molBundleTest.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/molBundleTest.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build
[ 61%] Built target graphmoltestChirality
make -f Code/GraphMol/CMakeFiles/hanoiTest.dir/build.make Code/GraphMol/CMakeFiles/hanoiTest.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/hanoiTest.dir/DependInfo.cmake --color=
[ 61%] Built target graphmoltestPicklerGlobalSetting
make -f Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/build.make Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/molBundleTest.dir/build.make Code/GraphMol/CMakeFiles/molBundleTest.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/CMakeFiles/molBundleTest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 62%] Built target graphmoltestPickler
make -f Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/hanoiTest.dir/build.make Code/GraphMol/CMakeFiles/hanoiTest.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/CMakeFiles/hanoiTest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/build.make Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/build
[ 62%] Built target molBundleTest
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build.make Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/build
[ 62%] Built target hanoiTest
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 63%] Built target resMolSupplierTest
make -f Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build.make Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build
[ 63%] Built target testDepictor
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 63%] Built target rdDepictor
make -f Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/depend
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/DependInfo.cmake --color=
[ 63%] Built target smiTest1
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/DependInfo.cmake --color=
[ 63%] Built target cxsmilesTest
make -f Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 63%] Built target smiTestCatch
make -f Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 63%] Built target testMol2ToMol
[ 63%] Built target testTplParser
make -f Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/depend
make -f Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/DependInfo.cmake --color=
[ 63%] Built target testMolWriter
make -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/depend
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build
make -f Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/build
[ 64%] Built target testMolSupplier
make -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/DependInfo.cmake --color=
[ 64%] Built target testExtendedStereoParsing
[ 64%] Built target testSequence
make -f Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/depend
make -f Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Substruct /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/DependInfo.cmake --color=
[ 64%] Built target fileParsersTest1
make -f Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 65%] Built target fileParsersCatchTest
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/DependInfo.cmake --color=
[ 65%] Built target testSubstructMatch
make -f Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build.make Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/DependInfo.cmake --color=
[ 67%] Built target Descriptors
make -f Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/DependInfo.cmake --color=
[ 68%] Built target testChemTransforms
make -f Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build.make Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build.make Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build.make Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build
[ 68%] Built target filterCatalogTest
make -f Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 69%] Built target rdfiltercatalog
make -f Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/DependInfo.cmake --color=
[ 69%] Built target testFragCatalog
make -f Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build.make Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/DependInfo.cmake --color=
[ 70%] Built target rdfragcatalog
make -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/depend
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 70%] Built target testDescriptors
make -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/depend
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/DependInfo.cmake --color=
[ 70%] Built target testAUTOCORR2D
make -f Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/depend
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build.make Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolTransforms /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build
[ 71%] Built target testFingerprints
make -f Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build
[ 71%] Built target rdMolDescriptors
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 71%] Built target testFingerprintGenerators
make -f Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/depend
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/DependInfo.cmake --color=
[ 71%] Built target testMolTransforms
make -f Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build.make Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/depend
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolCatalog/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 71%] Built target rdForceFieldHelpers
make -f Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/depend
[ 71%] Built target testFeatures
make -f Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolHash /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build.make Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build
make -f Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 71%] Built target testMolCatalog
[ 72%] Built target rdMolCatalog
make -f Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/depend
make -f Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/build.make Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MMPA /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build
[ 73%] Built target MolHash
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/depend
[ 73%] Built target FMCS
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/DependInfo.cmake --color=
make -f Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build.make Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/UFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/build.make Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/build
[ 73%] Built target MMPA
make -f Code/DistGeom/CMakeFiles/DistGeometry.dir/build.make Code/DistGeom/CMakeFiles/DistGeometry.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom/CMakeFiles/DistGeometry.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build.make Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/DistGeom/CMakeFiles/DistGeometry.dir/build.make Code/DistGeom/CMakeFiles/DistGeometry.dir/build
[ 75%] Built target StructChecker
make -f Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/DistGeom/CMakeFiles/DistGeometry.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/DependInfo.cmake --color=
[ 76%] Built target trajectoryTest
make -f Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build.make Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/DependInfo.cmake --color=
[ 76%] Built target testUFFForceField
make -f Code/GraphMol/CMakeFiles/graphmolTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolTest1.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolTest1.dir/DependInfo.cmake --color=
[ 76%] Built target DistGeometry
make -f Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/depend
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build.make Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolTest1.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolTest1.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 76%] Built target MolAlign
make -f Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build
[ 77%] Built target rdForceField
make -f Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build.make Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 78%] Built target graphmolTest1
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/DependInfo.cmake --color=
make -f Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/build.make Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Test /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build.make Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/build.make Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/build
[ 81%] Built target ChemReactions
make -f Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolHash /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/DependInfo.cmake --color=
[ 81%] Built target testFMCS
make -f Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build.make Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolHash/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/DependInfo.cmake --color=
[ 82%] Built target rdFMCS
[ 82%] Built target FMCStest
make -f Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/depend
make -f Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build.make Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MMPA/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/DependInfo.cmake --color=
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MMPA /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build.make Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build.make Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 82%] Built target testMolHash
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/build.make Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/DependInfo.cmake --color=
[ 83%] Built target rdMMPA
[ 83%] Built target testMMPA
make -f Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/build.make Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/depend
make -f Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RGroupDecomposition /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/DependInfo.cmake --color=
[ 84%] Built target rdMolHash
make -f Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/depend
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/build.make Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/build.make Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/build
[ 84%] Built target testStructChecker
make -f Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/build
[ 84%] Built target RGroupDecomposition
make -f Code/DistGeom/CMakeFiles/testDistGeom.dir/build.make Code/DistGeom/CMakeFiles/testDistGeom.dir/depend
[ 84%] Built target rdStructChecker
make -f Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build.make Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom/CMakeFiles/testDistGeom.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build'.
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/DistGeom/CMakeFiles/testDistGeom.dir/build.make Code/DistGeom/CMakeFiles/testDistGeom.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build.make Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/DistGeom/CMakeFiles/testDistGeom.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 87%] Built target DistGeomHelpers
[ 89%] Built target MolStandardize
make -f Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/depend
make -f Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/DependInfo.cmake --color=
[ 89%] Built target testDistGeom
make -f Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/DependInfo.cmake --color=
[ 89%] Built target DistGeom
make -f Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ChemReactions/CMakeFiles/testEnumeration.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 90%] Built target testEnumeration
make -f Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build.make Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/depend
[ 91%] Built target testReaction
make -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/MMFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/DependInfo.cmake --color=
[ 91%] Built target testReactionFingerprints
make -f Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/UFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/DependInfo.cmake --color=
[ 91%] Built target rxnTestCatch
make -f Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build.make Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/CrystalFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build.make Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build.make Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 92%] Built target rdChemReactions
[ 92%] Built target testMMFFForceFieldHelpers
make -f Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/depend
make -f Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build.make Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/DependInfo.cmake --color=
[ 92%] Built target testCrystalForceField
make -f Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/DependInfo.cmake --color=
[ 92%] Built target testUFFForceFieldHelpers
make -f Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build.make Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build.make Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build.make Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build
[ 92%] Built target testDistGeomHelpers
make -f Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 93%] Built target rdDistGeom
make -f Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/depend
[ 94%] Built target testMolAlign
make -f Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RGroupDecomposition /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/DependInfo.cmake --color=
[ 94%] Built target rdMolAlign
make -f Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/depend
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RGroupDecomposition/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 94%] Built target testShapeHelpers
make -f Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/build
[ 94%] Built target testRGroupDecomp
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/depend
make[3]: Nothing to be done for 'Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 94%] Built target MolDraw2D
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/DependInfo.cmake --color=
make -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/build
[ 94%] Built target rdRGroupDecomposition
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 95%] Built target molNormalizeTest
make -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/build
[ 95%] Built target molValidateTest
make -f Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/DependInfo.cmake --color=
[ 95%] Built target molStandardizeTest
make -f Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/DependInfo.cmake --color=
[ 96%] Built target molChargeTest
make -f Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/build.make Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/depend
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 96%] Built target molStandardizeSmallTest
make -f Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/build.make Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/MMFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/DependInfo.cmake --color=
[ 96%] Built target molFragmentTest
[ 97%] Built target molTautomerTest
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/depend
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/build.make Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/build.make Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 98%] Built target rdMolStandardize
make -f Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/DependInfo.cmake --color=
[ 99%] Built target testMMFFForceField
make -f Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/DependInfo.cmake --color=
[100%] Built target moldraw2DTest1
[100%] Built target moldraw2DRxnTest1
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[100%] Built target rdMolDraw2D
[100%] Built target rdmolops
make[2]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_start /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 0
make -f CMakeFiles/Makefile2 preinstall
make[2]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[2]: Nothing to be done for 'preinstall'.
make[2]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "None"
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/cmake/rdkit/rdkit-targets.cmake
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/cmake/rdkit/rdkit-targets-none.cmake
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/cmake/rdkit/rdkit-config.cmake
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/cmake/rdkit/rdkit-config-version.cmake
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Avalon
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Avalon/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/AllChem.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/AtomPairs
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/AtomPairs/Pairs.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/AtomPairs/Sheridan.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/AtomPairs/Torsions.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/AtomPairs/Utils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/AtomPairs/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/BRICS.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/BuildFragmentCatalog.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/ChemUtils
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/ChemUtils/AlignDepict.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/ChemUtils/BulkTester.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/ChemUtils/DescriptorUtilities.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/ChemUtils/SDFToCSV.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/ChemUtils/TemplateExpand.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/ChemUtils/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/ChemicalFeatures.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/ChemicalForceFields.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Crippen.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/DSViewer.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Descriptors.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Descriptors3D.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Draw
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Draw/FreeSans.ttf
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Draw/IPythonConsole.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Draw/MolDrawing.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Draw/SimilarityMaps.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Draw/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Draw/aggCanvas.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Draw/cairoCanvas.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Draw/canvasbase.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Draw/mplCanvas.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Draw/qtCanvas.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Draw/spingCanvas.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/EState
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/EState/AtomTypes.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/EState/EState.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/EState/EState_VSA.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/EState/Fingerprinter.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/EState/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/EnumerateHeterocycles.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/EnumerateStereoisomers.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/FastSDMolSupplier.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/FeatFinderCLI.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/FeatMaps
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/FeatMaps/FeatMapParser.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/FeatMaps/FeatMapPoint.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/FeatMaps/FeatMapUtils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/FeatMaps/FeatMaps.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/FeatMaps/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Features
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Features/FeatDirUtilsRD.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Features/ShowFeats.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Features/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/FilterCatalog.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Fingerprints
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Fingerprints/ClusterMols.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Fingerprints/DbFpSupplier.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Fingerprints/FingerprintMols.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Fingerprints/MolSimilarity.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Fingerprints/SimilarityScreener.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Fingerprints/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Fraggle
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Fraggle/FraggleSim.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Fraggle/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/FragmentCatalog.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/FragmentMatcher.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Fragments.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/FunctionalGroups.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/GraphDescriptors.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Graphs.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Lipinski.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MACCSkeys.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MCS.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolCatalog.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolDb
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolDb/FingerprintUtils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolDb/Loader.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolDb/Loader_orig.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolDb/Loader_sa.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolDb/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolKey
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolKey/InchiInfo.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolKey/MolKey.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolKey/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolStandardize
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolStandardize/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolStandardize/charge.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolStandardize/errors.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolStandardize/fragment.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolStandardize/metal.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolStandardize/normalize.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolStandardize/resonance.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolStandardize/standardize.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolStandardize/tautomer.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolStandardize/utils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolStandardize/validate.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolStandardize/validations.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolSurf.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/PandasTools.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/PeriodicTable.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Pharm2D
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Pharm2D/Generate.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Pharm2D/Gobbi_Pharm2D.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Pharm2D/LazyGenerator.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Pharm2D/Matcher.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Pharm2D/SigFactory.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Pharm2D/Utils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Pharm2D/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Pharm3D
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Pharm3D/EmbedLib.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Pharm3D/ExcludedVolume.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Pharm3D/Pharmacophore.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Pharm3D/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/PropertyMol.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/PyMol.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/QED.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Randomize.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Recap.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/ReducedGraphs.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/SATIS.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/SaltRemover.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Scaffolds
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Scaffolds/MurckoScaffold.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Scaffolds/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/ShowMols.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/SimpleEnum
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/SimpleEnum/Enumerator.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/SimpleEnum/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Subshape
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Subshape/BuilderUtils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Subshape/SubshapeAligner.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Subshape/SubshapeBuilder.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Subshape/SubshapeObjects.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Subshape/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Subshape/testCombined.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Suppliers
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Suppliers/DbMolSupplier.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Suppliers/MolSupplier.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Suppliers/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/TemplateAlign.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/TorsionFingerprints.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/fmcs
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/fmcs/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/fmcs/fmcs
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/fmcs/fmcs.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/inchi.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/DataManip
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/DataManip/Metric
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/DataManip/Metric/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/DataManip/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/DataStructs
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/DataStructs/BitEnsemble.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/DataStructs/BitEnsembleDb.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/DataStructs/BitUtils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/DataStructs/HierarchyVis.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/DataStructs/LazySignature.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/DataStructs/TopNContainer.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/DataStructs/VectCollection.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/DataStructs/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Dbase
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Dbase/DbConnection.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Dbase/DbInfo.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Dbase/DbModule.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Dbase/DbReport.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Dbase/DbResultSet.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Dbase/DbUtils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Dbase/StorageUtils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Dbase/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/DistanceGeometry
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/DistanceGeometry/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ForceField
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ForceField/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Geometry
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Geometry/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/AnalyzeComposite.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/BuildComposite.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Cluster
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Cluster/Butina.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Cluster/ClusterUtils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Cluster/ClusterVis.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Cluster/Clusters.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Cluster/Murtagh.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Cluster/Resemblance.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Cluster/Standardize.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Cluster/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Cluster/murtagh_test.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Composite
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Composite/AdjustComposite.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Composite/BayesComposite.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Composite/Composite.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Composite/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/CompositeRun.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Data
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Data/DataUtils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Data/FindQuantBounds.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Data/MLData.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Data/Quantize.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Data/SplitData.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Data/Stats.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Data/Transforms.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Data/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/DecTree
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/DecTree/BuildQuantTree.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/DecTree/BuildSigTree.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/DecTree/CrossValidate.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/DecTree/DecTree.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/DecTree/Forest.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/DecTree/ID3.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/DecTree/PruneTree.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/DecTree/QuantTree.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/DecTree/SigTree.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/DecTree/Tree.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/DecTree/TreeUtils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/DecTree/TreeVis.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/DecTree/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/DecTree/randomtest.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Descriptors
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Descriptors/CompoundDescriptors.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Descriptors/Descriptors.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Descriptors/MoleculeDescriptors.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Descriptors/Parser.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Descriptors/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/EnrichPlot.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/GrowComposite.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/InfoTheory
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/InfoTheory/BitClusterer.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/InfoTheory/BitRank.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/InfoTheory/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/InfoTheory/entropy.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/KNN
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/KNN/CrossValidate.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/KNN/DistFunctions.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/KNN/KNNClassificationModel.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/KNN/KNNModel.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/KNN/KNNRegressionModel.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/KNN/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/MLUtils
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/MLUtils/VoteImg.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/MLUtils/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/MatOps.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/ModelPackage
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/ModelPackage/PackageUtils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/ModelPackage/Packager.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/ModelPackage/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/NaiveBayes
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/NaiveBayes/ClassificationModel.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/NaiveBayes/CrossValidate.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/NaiveBayes/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Neural
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Neural/ActFuncs.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Neural/CrossValidate.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Neural/NetNode.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Neural/Network.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Neural/Trainers.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Neural/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Neural/architecture.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/SLT
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/SLT/Risk.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/SLT/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Scoring
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Scoring/Scoring.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Scoring/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/ScreenComposite.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/files.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Numerics
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Numerics/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/RDConfig.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/RDLogger.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/RDRandom.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/SimDivFilters
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/SimDivFilters/SimilarityPickers.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/SimDivFilters/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/TestRunner.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/VLib
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/VLib/Filter.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/VLib/Node.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/VLib/NodeLib
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/VLib/NodeLib/DbMolSupply.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/VLib/NodeLib/DbPickleSupplier.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/VLib/NodeLib/SDSupply.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/VLib/NodeLib/SmartsMolFilter.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/VLib/NodeLib/SmartsRemover.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/VLib/NodeLib/SmilesDupeFilter.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/VLib/NodeLib/SmilesOutput.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/VLib/NodeLib/SmilesSupply.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/VLib/NodeLib/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/VLib/NodeLib/demo.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/VLib/Output.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/VLib/Supply.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/VLib/Transform.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/VLib/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/_py2_pickle.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/six.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PDF
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PDF/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PDF/pdfdoc.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PDF/pdfgen.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PDF/pdfgeom.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PDF/pdfmetrics.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PDF/pdfutils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PDF/pidPDF.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pidPIL.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-10.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-10.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-12.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-12.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-14.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-14.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-18.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-18.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-24.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-24.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-8.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-8.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-8.pil.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-10.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-10.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-12.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-12.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-14.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-14.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-18.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-18.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-24.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-24.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-8.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-8.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-10.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-10.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-12.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-12.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-14.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-14.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-18.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-18.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-24.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-24.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-8.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-8.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-10.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-10.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-12.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-12.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-14.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-14.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-18.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-18.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-24.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-24.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-8.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-8.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/metrics.dat
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/removemedium.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/symbol-10.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/symbol-10.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/symbol-12.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/symbol-12.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/symbol-14.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/symbol-14.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/symbol-18.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/symbol-18.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/symbol-24.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/symbol-24.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/symbol-8.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/symbol-8.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-10.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-10.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-12.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-12.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-14.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-14.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-18.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-18.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-24.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-24.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-8.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-8.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-10.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-10.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-12.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-12.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-14.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-14.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-18.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-18.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-24.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-24.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-8.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-8.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PS
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PS/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PS/fontinfo.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PS/latin1MetricsCache.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PS/pidPS.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PS/psmetrics.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/Pyart
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/Pyart/Fontmapping.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/Pyart/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/Pyart/pidPyart.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/Qt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/Qt/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/Qt/pidQt.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/Qt/pidQt4.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/README
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/ReportLab
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/ReportLab/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/ReportLab/pidReportLab.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/SVG
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/SVG/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/SVG/pidSVG.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/TK
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/TK/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/TK/pidTK.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/WX
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/WX/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/WX/pidWX.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/WX/pidWxDc.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/colors.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/examples
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/examples/formatted-strings.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/examples/tkCanvas-with-scrollbars.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/examples/tkCanvasPIL-with-scrollbars.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/pagesizes.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/patches
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/patches/Imaging-1.1-fixplugin-path
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/patches/Imaging-1.1.1.diff
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/pid.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/stringformat.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/tests
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/tests/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/tests/pidtest.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/tests/pstests.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/tests/testallps.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/tests/pidtest.pyc
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/tests/pstests.pyc
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/tests/testallps.ps
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/util
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/util/HTMLPiddler.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/util/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/utils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/utils
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/utils/12h.gif
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/utils/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/utils/cactvs.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/utils/chemdraw.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/utils/chemdraw_qax.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/utils/chemutils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/utils/comhack.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/utils/fileutils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/utils/listutils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/utils/retest.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/utils/spiral.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/utils/test1.gif
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/utils/test2.gif
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/utils/test3.gif
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/BaseFeatures.fdef
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/Crippen.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/DTDs
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/DTDs/RD_Dataset.dtd
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/DTDs/RD_Model.dtd
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/DTDs/validate.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/FragmentDescriptors.csv
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/FunctionalGroups.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/Functional_Group_Hierarchy.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/MolStandardize
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/MolStandardize/acid_base_pairs.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/MolStandardize/acid_base_pairs2.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/MolStandardize/fragmentPatterns.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/MolStandardize/normalizations.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/MolStandardize/tautomerTransforms.in
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/NCI
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/NCI/first_200.tpsa.csv
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/Pains/README.md
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/RDData.sqlt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/RDTests.sqlt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/Salts.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/SmartsLib
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/SmartsLib/RLewis_smarts.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/SmartsLib/patty_rules.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/SmartsLib/tests
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/SmartsLib/tests/fps.1000.counts.pkl.gz
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/SmartsLib/tests/mols.1000.pkl.gz
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/rddata.sql
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/struchk
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/struchk/checkfgs.opt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/struchk/checkfgs.trn
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Analysis
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/LeadLikeT80_Correlation.csv
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/README
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Analysis/ForceField
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Analysis/ForceField/ForceFieldTerms.new.odt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Analysis/ForceField/UFF Parameters.ods
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/BackwardsIncompatibleChanges.md
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/CMakeLists.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/FindMyRDKit.cmake
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example1.cpp
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example10.cpp
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example11.cpp
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example12.cpp
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example13.cpp
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example14.cpp
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example15.cpp
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example16.cpp
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example2.cpp
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example3.cpp
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example5.cpp
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example6.cpp
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example7.cpp
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/C++Examples/example9.cpp
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/Cartridge.md
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/Cookbook.md
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/GettingStartedInC++.md
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/GettingStartedInPython.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/Install.md
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/Makefile
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/Overview.md
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/RDKit_Book.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/api-docs.rst
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/data/5ht3ligs.sdf
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/data/MinimalFeatures.fdef
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/data/actives_5ht3.sdf
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/data/bzr.sdf
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/data/bzr.smi
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/data/cdk2.sdf
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/data/chiral.mol
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/data/input.mol
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/data/invalid.mol
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/data/solubility.test.sdf
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/data/solubility.train.sdf
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/exts
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/exts/extapi.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/images
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Avalon.pyAvalonTools.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Avalon.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.AllChem.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.Pairs.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.Sheridan.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.Torsions.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.Utils.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.BRICS.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.BuildFragmentCatalog.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.AlignDepict.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.BulkTester.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.DescriptorUtilities.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.SDFToCSV.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.TemplateExpand.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemicalFeatures.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemicalForceFields.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Crippen.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.DSViewer.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Descriptors.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Descriptors3D.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.IPythonConsole.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.MolDrawing.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.SimilarityMaps.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.aggCanvas.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.cairoCanvas.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.canvasbase.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.mplCanvas.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.qtCanvas.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.rdMolDraw2D.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.AtomTypes.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.EState.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.EState_VSA.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.Fingerprinter.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EnumerateHeterocycles.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EnumerateStereoisomers.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FastSDMolSupplier.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatFinderCLI.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.FeatMapParser.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.FeatMapPoint.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.FeatMapUtils.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.FeatMaps.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Features.FeatDirUtilsRD.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Features.ShowFeats.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Features.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FilterCatalog.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.ClusterMols.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.DbFpSupplier.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.FingerprintMols.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.MolSimilarity.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.SimilarityScreener.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fraggle.FraggleSim.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fraggle.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FragmentCatalog.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FragmentMatcher.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fragments.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FunctionalGroups.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.GraphDescriptors.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Graphs.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Lipinski.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MACCSkeys.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MCS.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolCatalog.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.FingerprintUtils.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.Loader.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.Loader_orig.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.Loader_sa.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolKey.InchiInfo.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolKey.MolKey.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolKey.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolStandardize.rdMolStandardize.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolStandardize.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolSurf.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.PandasTools.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.PeriodicTable.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.Generate.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.Gobbi_Pharm2D.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.LazyGenerator.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.Matcher.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.SigFactory.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.Utils.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm3D.EmbedLib.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm3D.ExcludedVolume.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm3D.Pharmacophore.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm3D.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.PropertyMol.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.PyMol.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.QED.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Randomize.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Recap.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ReducedGraphs.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.SATIS.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.SaltRemover.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Scaffolds.MurckoScaffold.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Scaffolds.ScaffoldTree.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Scaffolds.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ShowMols.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.SimpleEnum.Enumerator.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.SimpleEnum.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.BuilderUtils.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.SubshapeAligner.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.SubshapeBuilder.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.SubshapeObjects.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.testCombined.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Suppliers.DbMolSupplier.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Suppliers.MolSupplier.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Suppliers.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.TemplateAlign.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.TorsionFingerprints.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.fmcs.fmcs.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.fmcs.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.inchi.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdChemReactions.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdChemicalFeatures.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdCoordGen.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdDepictor.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdDistGeom.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdFMCS.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdFingerprintGenerator.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdForceFieldHelpers.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdFreeSASA.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMMPA.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolAlign.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolCatalog.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolChemicalFeatures.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolDescriptors.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolHash.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolInterchange.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolTransforms.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdPartialCharges.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdRGroupDecomposition.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdReducedGraphs.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdSLNParse.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdShapeHelpers.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdStructChecker.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdSubstructLibrary.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdchem.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdfiltercatalog.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdfragcatalog.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdinchi.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdmolfiles.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdmolops.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdqueries.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdtrajectory.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataManip.Metric.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataManip.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.BitEnsemble.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.BitEnsembleDb.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.BitUtils.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.HierarchyVis.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.LazySignature.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.TopNContainer.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.VectCollection.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbConnection.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbInfo.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbModule.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbReport.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbResultSet.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbUtils.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.StorageUtils.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DistanceGeometry.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ForceField.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Geometry.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.AnalyzeComposite.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.BuildComposite.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Butina.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.ClusterUtils.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.ClusterVis.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Clusters.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Murtagh.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Resemblance.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Standardize.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.murtagh_test.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Composite.AdjustComposite.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Composite.BayesComposite.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Composite.Composite.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Composite.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.CompositeRun.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.DataUtils.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.FindQuantBounds.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.MLData.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.Quantize.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.SplitData.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.Stats.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.Transforms.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.BuildQuantTree.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.BuildSigTree.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.CrossValidate.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.DecTree.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.Forest.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.ID3.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.PruneTree.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.QuantTree.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.SigTree.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.Tree.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.TreeUtils.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.TreeVis.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.randomtest.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.CompoundDescriptors.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.Descriptors.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.MoleculeDescriptors.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.Parser.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.EnrichPlot.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.GrowComposite.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.BitClusterer.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.BitRank.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.entropy.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.CrossValidate.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.DistFunctions.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.KNNClassificationModel.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.KNNModel.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.KNNRegressionModel.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.MLUtils.VoteImg.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.MLUtils.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.MatOps.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.ModelPackage.PackageUtils.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.ModelPackage.Packager.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.ModelPackage.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.NaiveBayes.ClassificationModel.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.NaiveBayes.CrossValidate.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.NaiveBayes.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.ActFuncs.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.CrossValidate.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.NetNode.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.Network.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.Trainers.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.SLT.Risk.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.SLT.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Scoring.Scoring.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Scoring.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.ScreenComposite.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.files.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Numerics.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.RDConfig.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.RDLogger.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.RDPaths.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.RDRandom.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.SimDivFilters.SimilarityPickers.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.SimDivFilters.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.TestRunner.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.Filter.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.Node.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.DbMolSupply.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.DbPickleSupplier.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SDSupply.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmartsMolFilter.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmartsRemover.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmilesDupeFilter.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmilesOutput.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmilesSupply.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.demo.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.Output.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.Supply.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.Transform.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.six.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.cactvs.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.chemdraw.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.chemdraw_qax.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.chemutils.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.comhack.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.fileutils.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.listutils.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.spiral.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/conf.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Code
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Code/Chem
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Code/Chem/FragmentCatalogs.html
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Code/Chem/Pharm2D.signatures.ai
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Code/Chem/Pharm2D.signatures.jpg
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Code/Chem/Pharm2D.triangles.ai
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Code/Chem/Pharm2D.triangles.jpg
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Code/CodingStandards.md
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Code/EnhancedStereo.md
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Code/images
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_abs_and_base.png
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_abs_and_expand.png
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_abs_or_base.png
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_and2_base.png
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_and2_expand.png
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_cis_base.png
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_cis_expand.png
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_trans_base.png
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_trans_expand.png
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_or1_cis_base.png
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_or1_or2_base.png
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_or1_trans_base.png
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Images
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Images/logo.ai
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Images/logo.inkscape.svg
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Images/logo.lrg.png
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Images/logo.png
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Images/logo_plain.inkscape.svg
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Images/logo_plain.png
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Images/wiki
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Images/wiki/morganfp_atomenv1.png
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Notebooks
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Notebooks/FingerprintGenerators.ipynb
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Notebooks/MolStandardize.ipynb
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-DummyCores.ipynb
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-GenericCores.ipynb
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-MutipleCores.ipynb
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-RingSubstitution.ipynb
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-StereoChemTest.ipynb
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-example-lactam.ipynb
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Notebooks/compounds.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Programs
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Programs/RDPharm3D
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Programs/RDPharm3D/AddPoints-shot1.jpg
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Programs/RDPharm3D/AddPoints-shot2.jpg
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Programs/RDPharm3D/AddPoints-shot3.jpg
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Programs/RDPharm3D/AddingMolecules.htm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Programs/RDPharm3D/AddingPoints.htm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Programs/RDPharm3D/BuildingBoundsMatrix.htm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Programs/RDPharm3D/EditingMolecules.htm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Programs/RDPharm3D/ExploringHits.htm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Programs/RDPharm3D/FDefFile.htm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Programs/RDPharm3D/FindingMappings.htm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Programs/RDPharm3D/GeneratingStructures.htm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Programs/RDPharm3D/GettingStarted.htm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Programs/RDPharm3D/Icon.ico
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Programs/RDPharm3D/ImproveAlignments.htm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Programs/RDPharm3D/Index.hhk
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Programs/RDPharm3D/Intro.htm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Programs/RDPharm3D/MatchingPharmacophores.htm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Programs/RDPharm3D/MethodOverview.htm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Programs/RDPharm3D/RD.css
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Programs/RDPharm3D/RDPharm3D-Splash.jpg
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Programs/RDPharm3D/RDPharm3D.hhc
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Programs/RDPharm3D/RDPharm3D.hhp
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Programs/RDPharm3D/References.htm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Programs/RDPharm3D/Refine-shot1.jpg
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Programs/RDPharm3D/Refine-shot2.jpg
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Programs/RDPharm3D/SavingResults.htm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Programs/RDPharm3D/ScoringAlignments.htm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Programs/RDPharm3D/Using.htm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Programs/RDPharm3D/ViewOptions.htm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Programs/RDPharm3D/contents.htm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Programs/RDPharm3D/index.htm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/RD.css
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/AtomAtomSimilarity
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/AtomAtomSimilarity/AtomAtomPathSimilarity.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/CMakeLists.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/ChiralPairs
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/ChiralPairs/ChiralDescriptors.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/ChiralPairs/README.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/ConformerParser
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/CMakeLists.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/ConformerParser.cpp
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/ConformerParser.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/Wrap
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/Wrap/CMakeLists.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/Wrap/rdConformerParser.cpp
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/Wrap/testConformerParser.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/Wrap/test_list.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/test.cpp
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/test_list.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/Fastcluster
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/README.md
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/cdk2.smi
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/centroid.tsv
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/clustered.tsv
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/clustered_parse.tsv
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/fastcluster.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/fp.tsv
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/testdata
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/testdata/cdk2.sdf
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/testdata/converted.smi
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/testdata/sdf2smi.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/Glare
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/Glare/README.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/Glare/glare.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/IFG
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/IFG/README
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/IFG/ifg.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/LEF
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/LEF/AddLabels.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/LEF/ClusterFps.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/LEF/CreateFps.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/LEF/DistancePlot.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/LEF/DistancePredict.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/LEF/README.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/M_Kossner
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/M_Kossner/BaseFeatures_DIP2_NoMicrospecies.fdef
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/M_Kossner/Frames.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/M_Kossner/README
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/MolVS
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/MolVS/molvs_cli.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/NP_Score
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/NP_Score/README
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/NP_Score/npscorer.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/NP_Score/publicnp.model.gz
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/PBF
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/PBF/Makefile
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/PBF/PBFRDKit.cpp
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/PBF/PBFRDKit.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/PBF/README
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/PBF/demo.cpp
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/PBF/pbf.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/PBF/testData
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/PBF/testData/egfr.out
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/PBF/testData/egfr.sdf
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/RxnRoleAssignment
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/RxnRoleAssignment/README.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/RxnRoleAssignment/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/RxnRoleAssignment/identifyReactants.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/RxnRoleAssignment/utils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/SA_Score
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/SA_Score/README
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/SA_Score/UnitTestSAScore.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/SA_Score/data
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/SA_Score/data/zim.100.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/SA_Score/fpscores.pkl.gz
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/SA_Score/sascorer.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/fraggle
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/fraggle/atomcontrib.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/fraggle/cxn_tversky.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/fraggle/data
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/fraggle/data/ChEMBL_11265_actives.smi
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/fraggle/data/final_fraggle_results.csv
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/fraggle/data/fragmentation_tversky_out
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/fraggle/data/query.smi
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/fraggle/data/query_fragmentation.csv
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/fraggle/fraggle.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/fraggle/rdkit_tversky.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/fraggle/readme.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/README.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/cansmirk.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/create_mmp_db.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample.smi
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_cansmirks.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_input_smi.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_input_subs.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_input_subs_smarts.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_input_trans.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_input_trans_smarts.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_search_smi_output.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_search_subs_output.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_search_subs_smart_output.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_search_trans_output.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_search_trans_smarts_output.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_fragmented.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_mmps_default.csv
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_mmps_maxheavy.csv
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_mmps_maxratio.csv
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_mmps_sym.csv
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_mmps_sym_maxheavy.csv
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_mol_trans_output.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_smiles_mol_trans.smi
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_smirks.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_smirks_mol_trans.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_transfroms.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/simple.smi
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/indexing.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/mol_transform.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/rfrag.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/search_mmp_db.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/test_list.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/test_rfrag.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/pzc
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/pzc/p_con.html
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/pzc/p_con.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/pzc/readme.md
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects/DbCLI
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects/DbCLI/CreateDb.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects/DbCLI/SearchDb.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects/DbCLI/TestDbCLI.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects/DbCLI/moe_like.dsc
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/README
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr.2.smi
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr.sdf
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr.smi
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr_q1.mol
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/pubchem.200.sdf
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr/loadErrors.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr/Compounds.sqlt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr/AtomPairs.sqlt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr/Fingerprints.sqlt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr/Descriptors.sqlt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Scripts
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Scripts/FeatFinderCLI.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Scripts/PythonFormat.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Scripts/README.md
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Scripts/create_deb_packages.sh
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/README
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/license.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitRDGeneral.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitRDGeneral.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitRDGeneral.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/Exceptions.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/BadFileException.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/BoostStartInclude.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/BoostEndInclude.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/Dict.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/FileParseException.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/Invariant.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/RDAny.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/RDValue.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/RDValue-doublemagic.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/RDValue-taggedunion.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/RDLog.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/RDProps.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/RDThreads.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/StreamOps.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/types.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/utils.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/versions.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/RDConfig.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/LocaleSwitcher.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/Ranking.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/hanoiSort.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/export.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/test.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/hash/hash
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/hash/hash/detail
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/hash/hash/detail/float_functions.hpp
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/hash/hash/detail/hash_float.hpp
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/hash/hash/extensions.hpp
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/hash/hash/hash.hpp
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/hash/hash/hash_fwd.hpp
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitRDBoost.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitRDBoost.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitRDBoost.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDBoost/Wrap.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDBoost/PySequenceHolder.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDBoost/list_indexing_suite.hpp
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDBoost/python.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDBoost/boost_numpy.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDBoost/python_streambuf.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/rdBase.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitDataStructs.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitDataStructs.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitDataStructs.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DataStructs/base64.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DataStructs/BitOps.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DataStructs/BitVect.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DataStructs/BitVects.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DataStructs/BitVectUtils.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DataStructs/DatastructsException.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DataStructs/DiscreteDistMat.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DataStructs/DiscreteValueVect.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DataStructs/ExplicitBitVect.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DataStructs/SparseBitVect.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DataStructs/SparseIntVect.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DataStructs/FPBReader.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DataStructs/MultiFPBReader.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/DataStructs/cDataStructs.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitRDGeometryLib.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitRDGeometryLib.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitRDGeometryLib.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Geometry/Grid3D.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Geometry/GridUtils.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Geometry/point.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Geometry/Transform2D.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Geometry/Transform3D.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Geometry/Transform.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Geometry/UniformGrid3D.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Geometry/Utils.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Geometry/rdGeometry.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Numerics/Matrix.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Numerics/SquareMatrix.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Numerics/SymmMatrix.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Numerics/Vector.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitAlignment.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitAlignment.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitAlignment.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Numerics/Alignment/AlignPoints.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Numerics/rdAlignment.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitEigenSolvers.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitEigenSolvers.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitEigenSolvers.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Numerics/EigenSolvers/PowerEigenSolver.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitOptimizer.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitOptimizer.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitOptimizer.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Numerics/Optimizer/BFGSOpt.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitForceField.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitForceField.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitForceField.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/Contrib.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/ForceField.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/UFF/AngleBend.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/UFF/BondStretch.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/UFF/Contribs.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/UFF/DistanceConstraint.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/UFF/AngleConstraint.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/UFF/TorsionConstraint.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/UFF/PositionConstraint.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/UFF/Nonbonded.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/UFF/Params.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/UFF/Inversion.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/UFF/TorsionAngle.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/MMFF/AngleBend.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/MMFF/BondStretch.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/MMFF/StretchBend.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/MMFF/OopBend.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/MMFF/TorsionAngle.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/MMFF/Nonbonded.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/MMFF/Contribs.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/MMFF/DistanceConstraint.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/MMFF/AngleConstraint.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/MMFF/TorsionConstraint.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/MMFF/PositionConstraint.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/MMFF/Params.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ForceField/rdForceField.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitDistGeometry.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitDistGeometry.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitDistGeometry.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DistGeom/BoundsMatrix.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DistGeom/ChiralSet.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DistGeom/ChiralViolationContrib.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DistGeom/DistGeomUtils.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DistGeom/DistViolationContrib.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DistGeom/FourthDimContrib.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DistGeom/TriangleSmooth.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/DistanceGeometry/DistGeom.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitCatalogs.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitCatalogs.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitCatalogs.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Catalogs/CatalogEntry.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Catalogs/Catalog.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Catalogs/CatalogParams.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitGraphMol.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitGraphMol.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitGraphMol.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Atom.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/atomic_data.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/AtomIterators.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Bond.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/BondIterators.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Canon.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Chirality.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Conformer.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/details.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/GraphMol.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolOps.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolPickler.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/PeriodicTable.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/QueryAtom.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/QueryBond.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/QueryOps.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/RDKitBase.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/RDKitQueries.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Resonance.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/RingInfo.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Rings.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ROMol.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/RWMol.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/SanitException.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/StereoGroup.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MonomerInfo.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/new_canon.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolBundle.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitDepictor.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitDepictor.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitDepictor.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Depictor/DepictUtils.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Depictor/EmbeddedFrag.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Depictor/RDDepictor.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdDepictor.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitSmilesParse.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitSmilesParse.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitSmilesParse.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/SmilesParse/primes.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/SmilesParse/SmartsWrite.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/SmilesParse/SmilesParse.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/SmilesParse/SmilesParseOps.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/SmilesParse/SmilesWrite.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitFileParsers.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitFileParsers.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitFileParsers.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/FileParsers.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/FileParserUtils.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/MolFileStereochem.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/MolSupplier.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/MolWriters.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/SequenceParsers.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/SequenceWriters.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitSubstructMatch.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitSubstructMatch.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitSubstructMatch.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Substruct/SubstructMatch.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Substruct/SubstructUtils.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitChemReactions.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitChemReactions.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitChemReactions.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/Reaction.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/ReactionParser.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/ReactionPickler.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/ReactionFingerprints.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/ReactionUtils.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/ReactionRunner.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/PreprocessRxn.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/SanitizeRxn.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/Enumerate.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/EnumerateBase.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/EnumerationPickler.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/EnumerationStrategyBase.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/CartesianProduct.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/RandomSample.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/RandomSampleAllBBs.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdChemReactions.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitChemTransforms.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitChemTransforms.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitChemTransforms.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ChemTransforms/ChemTransforms.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ChemTransforms/MolFragmenter.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitSubgraphs.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitSubgraphs.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitSubgraphs.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Subgraphs/Subgraphs.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Subgraphs/SubgraphUtils.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitFilterCatalog.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitFilterCatalog.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitFilterCatalog.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FilterCatalog/FilterCatalogEntry.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FilterCatalog/FilterCatalog.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FilterCatalog/FilterMatcherBase.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FilterCatalog/FilterMatchers.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FilterCatalog/FunctionalGroupHierarchy.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdfiltercatalog.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitFragCatalog.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitFragCatalog.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitFragCatalog.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FragCatalog/FragCatalogEntry.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FragCatalog/FragCatalogUtils.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FragCatalog/FragCatGenerator.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FragCatalog/FragCatParams.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FragCatalog/FragFPGenerator.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdfragcatalog.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitDescriptors.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitDescriptors.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitDescriptors.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/Crippen.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/Lipinski.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/MolDescriptors.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/MolSurf.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/ConnectivityDescriptors.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/MQN.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/RegisterDescriptor.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/Property.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/AUTOCORR2D.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/Data3Ddescriptors.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/MolData3Ddescriptors.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/USRDescriptor.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolDescriptors.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitFingerprints.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitFingerprints.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitFingerprints.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/AtomPairs.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/Fingerprints.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/MorganFingerprints.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/MACCS.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/FingerprintGenerator.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/AtomPairGenerator.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/MorganGenerator.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/RDKitFPGenerator.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/TopologicalTorsionGenerator.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/FingerprintUtil.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdFingerprintGenerator.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitPartialCharges.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitPartialCharges.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitPartialCharges.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/PartialCharges/GasteigerCharges.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/PartialCharges/GasteigerParams.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdPartialCharges.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolTransforms.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolTransforms.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolTransforms.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolTransforms/MolTransforms.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolTransforms.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitForceFieldHelpers.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitForceFieldHelpers.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitForceFieldHelpers.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/UFF/AtomTyper.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/UFF/Builder.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/UFF/UFF.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/MMFF/AtomTyper.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/MMFF/Builder.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/MMFF/MMFF.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/CrystalFF/TorsionAngleM6.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdForceFieldHelpers.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitDistGeomHelpers.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitDistGeomHelpers.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitDistGeomHelpers.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/DistGeomHelpers/Embedder.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdDistGeom.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolAlign.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolAlign.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolAlign.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolAlign/AlignMolecules.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolAlign/O3AAlignMolecules.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolAlign.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolChemicalFeatures.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolChemicalFeatures.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolChemicalFeatures.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolChemicalFeatures/FeatureParser.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolChemicalFeatures/MolChemicalFeatureFactory.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolChemicalFeatures/MolChemicalFeature.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolChemicalFeatures.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitShapeHelpers.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitShapeHelpers.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitShapeHelpers.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ShapeHelpers/ShapeEncoder.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ShapeHelpers/ShapeUtils.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdShapeHelpers.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolCatalog.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolCatalog.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolCatalog.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolCatalog/MolCatalogEntry.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolCatalog/MolCatalog.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolCatalog/MolCatalogParams.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolCatalog.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2D.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2DSVG.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2Dwx.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2DUtils.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2DDetails.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolDraw2D.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolDraw2D.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolDraw2D.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Draw/rdMolDraw2D.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitFMCS.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitFMCS.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitFMCS.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FMCS/FMCS.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FMCS/Graph.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FMCS/Seed.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FMCS/SeedSet.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FMCS/MatchTable.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FMCS/RingMatchTableSet.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FMCS/SubstructureCache.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FMCS/SubstructMatchCustom.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FMCS/MaximumCommonSubgraph.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdFMCS.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolHash.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolHash.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolHash.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolHash/MolHash.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolHash.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMMPA.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMMPA.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMMPA.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MMPA/MMPA.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMMPA.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitStructChecker.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitStructChecker.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitStructChecker.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/StructChecker/StructChecker.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/StructChecker/Utilites.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/StructChecker/Pattern.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/StructChecker/Stereo.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/StructChecker/StripSmallFragments.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/StructChecker/ReCharge.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/StructChecker/Tautomer.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdStructChecker.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitReducedGraphs.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitReducedGraphs.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitReducedGraphs.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ReducedGraphs/ReducedGraphs.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdReducedGraphs.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitTrajectory.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitTrajectory.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitTrajectory.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Trajectory/Snapshot.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Trajectory/Trajectory.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitSubstructLibrary.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitSubstructLibrary.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitSubstructLibrary.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/SubstructLibrary/SubstructLibrary.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdSubstructLibrary.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitRGroupDecomposition.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitRGroupDecomposition.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitRGroupDecomposition.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/RGroupDecomposition/RGroupDecomp.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdRGroupDecomposition.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolInterchange.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolInterchange.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolInterchange.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolInterchange/MolInterchange.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolInterchange/details.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolInterchange.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitSLNParse.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitSLNParse.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitSLNParse.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/SLNParse/SLNAttribs.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/SLNParse/SLNParse.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/SLNParse/SLNParseOps.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdSLNParse.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdchem.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdmolops.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdqueries.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdmolfiles.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdtrajectory.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolStandardize.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolStandardize.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolStandardize.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/MolStandardize.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Metal.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Normalize.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Validate.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Charge.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Tautomer.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Fragment.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/FragmentCatalogEntry.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/FragmentCatalogParams.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/FragmentCatalogUtils.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/AcidBaseCatalogEntry.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/AcidBaseCatalogParams.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/AcidBaseCatalogUtils.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TransformCatalogEntry.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TransformCatalogParams.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TransformCatalogUtils.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TautomerCatalogEntry.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TautomerCatalogParams.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TautomerCatalogUtils.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolStandardize/rdMolStandardize.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Query/AndQuery.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Query/EqualityQuery.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Query/GreaterEqualQuery.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Query/GreaterQuery.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Query/LessEqualQuery.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Query/LessQuery.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Query/OrQuery.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Query/Query.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Query/QueryObjects.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Query/RangeQuery.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Query/SetQuery.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Query/XOrQuery.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Features/Feature.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DataManip/MetricMatrixCalc/MetricFuncs.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DataManip/MetricMatrixCalc/MetricMatrixCalc.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/DataManip/Metric/rdMetricMatrixCalc.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitSimDivPickers.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitSimDivPickers.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitSimDivPickers.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/SimDivPickers/DistPicker.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/SimDivPickers/HierarchicalClusterPicker.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/SimDivPickers/MaxMinPicker.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/SimDivFilters/rdSimDivPickers.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKithc.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKithc.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKithc.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Cluster/Clustering.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitInfoTheory.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitInfoTheory.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitInfoTheory.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/InfoTheory/rdInfoTheory.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Data/cQuantize.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitChemicalFeatures.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitChemicalFeatures.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitChemicalFeatures.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ChemicalFeatures/ChemicalFeature.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ChemicalFeatures/FreeChemicalFeature.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdChemicalFeatures.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/RDPaths.py
make[1]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
   debian/rules override_dh_install
make[1]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg'
dh_numpy
dh_install --list-missing
dh_install: Please use dh_missing --list-missing/--fail-missing instead
dh_install: This feature will be removed in compat 12.
dh_missing: usr/lib/cmake/rdkit/rdkit-targets.cmake exists in debian/tmp but is not installed to anywhere
dh_missing: usr/lib/cmake/rdkit/rdkit-targets-none.cmake exists in debian/tmp but is not installed to anywhere
dh_missing: usr/lib/cmake/rdkit/rdkit-config.cmake exists in debian/tmp but is not installed to anywhere
dh_missing: usr/lib/cmake/rdkit/rdkit-config-version.cmake exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/README exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/license.txt exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/RD.css exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/DrugLikeT80_CorrMat.png exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Analysis/Descriptors/Correlations/DrugLikeT80_Correlation.csv exists in debian/tmp but is not installed to anywhere
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dh_missing: usr/share/RDKit/Docs/Code/images/enhanced_stereo_or1_cis_base.png exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Code/images/enhanced_stereo_or1_or2_base.png exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Code/images/enhanced_stereo_or1_trans_base.png exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Images/logo.ai exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Images/logo.inkscape.svg exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Images/logo.lrg.png exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Images/logo.png exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Images/logo_plain.inkscape.svg exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Images/logo_plain.png exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Images/wiki/morganfp_atomenv1.png exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Notebooks/FingerprintGenerators.ipynb exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Notebooks/MolStandardize.ipynb exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-DummyCores.ipynb exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-GenericCores.ipynb exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-MutipleCores.ipynb exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-RingSubstitution.ipynb exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-StereoChemTest.ipynb exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Notebooks/RGroupDecomposition-example-lactam.ipynb exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Notebooks/compounds.txt exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Programs/RDPharm3D/AddPoints-shot1.jpg exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Programs/RDPharm3D/AddPoints-shot2.jpg exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Programs/RDPharm3D/AddPoints-shot3.jpg exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Programs/RDPharm3D/AddingMolecules.htm exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Programs/RDPharm3D/AddingPoints.htm exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Programs/RDPharm3D/BuildingBoundsMatrix.htm exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Programs/RDPharm3D/EditingMolecules.htm exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Programs/RDPharm3D/ExploringHits.htm exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Programs/RDPharm3D/FDefFile.htm exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Programs/RDPharm3D/FindingMappings.htm exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Programs/RDPharm3D/GeneratingStructures.htm exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Programs/RDPharm3D/GettingStarted.htm exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Programs/RDPharm3D/Icon.ico exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Programs/RDPharm3D/ImproveAlignments.htm exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Programs/RDPharm3D/Index.hhk exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Programs/RDPharm3D/Intro.htm exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Programs/RDPharm3D/MatchingPharmacophores.htm exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Programs/RDPharm3D/MethodOverview.htm exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Programs/RDPharm3D/RD.css exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Programs/RDPharm3D/RDPharm3D-Splash.jpg exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Programs/RDPharm3D/RDPharm3D.hhc exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Programs/RDPharm3D/RDPharm3D.hhp exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Programs/RDPharm3D/References.htm exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Programs/RDPharm3D/Refine-shot1.jpg exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Programs/RDPharm3D/Refine-shot2.jpg exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Programs/RDPharm3D/SavingResults.htm exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Programs/RDPharm3D/ScoringAlignments.htm exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Programs/RDPharm3D/Using.htm exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Programs/RDPharm3D/ViewOptions.htm exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Programs/RDPharm3D/contents.htm exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Programs/RDPharm3D/index.htm exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Scripts/FeatFinderCLI.py exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Scripts/PythonFormat.py exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Scripts/README.md exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Scripts/create_deb_packages.sh exists in debian/tmp but is not installed to anywhere
	The following debhelper tools have reported what they installed (with files per package)
	 * dh_install: librdkit-dev (47), librdkit1 (92), postgresql-11-rdkit (0), python-rdkit (1), rdkit-data (3), rdkit-doc (0)
	If the missing files are installed by another tool, please file a bug against it.
	When filing the report, if the tool is not part of debhelper itself, please reference the
	"Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+).
	  (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz)
	Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built
	For a short-term work-around: Add the files to debian/not-installed
mkdir -p /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/rdkit-doc/usr/share/doc/rdkit/
cp /<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/_build/latex/RDKit.pdf /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/rdkit-doc/usr/share/doc/rdkit/
cp -a /<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/_build/html /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/rdkit-doc/usr/share/doc/rdkit/
pg_buildext install /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit build-%v postgresql-%v-rdkit
supported-versions: WARNING! Unknown distribution: raspbian
debian found in ID_LIKE, treating as Debian
### install 11 ###
make[2]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/build-11'
/bin/mkdir -p '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib'
/bin/mkdir -p '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/share/postgresql/11/extension'
/bin/mkdir -p '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/share/postgresql/11/extension'
/usr/bin/install -c -m 755  rdkit.so '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib/rdkit.so'
/usr/bin/install -c -m 644 /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit.control '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/share/postgresql/11/extension/'
/usr/bin/install -c -m 644  rdkit--3.7.sql '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/share/postgresql/11/extension/'
/bin/mkdir -p '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib/bitcode/rdkit'
/bin/mkdir -p '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib/bitcode'/rdkit/
/usr/bin/install -c -m 644 rdkit_io.bc '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 mol_op.bc '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 bfp_op.bc '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 sfp_op.bc '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 rxn_op.bc '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 rdkit_gist.bc '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 bfp_gist.bc '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 bfp_gin.bc '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 low_gist.bc '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 guc.bc '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 cache.bc '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 adapter.bc '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 bitstring.bc '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib/bitcode'/rdkit/./
cd '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib/bitcode' && /usr/lib/llvm-7/bin/llvm-lto -thinlto -thinlto-action=thinlink -o rdkit.index.bc rdkit/rdkit_io.bc rdkit/mol_op.bc rdkit/bfp_op.bc rdkit/sfp_op.bc rdkit/rxn_op.bc rdkit/rdkit_gist.bc rdkit/bfp_gist.bc rdkit/bfp_gin.bc rdkit/low_gist.bc rdkit/guc.bc rdkit/cache.bc rdkit/adapter.bc rdkit/bitstring.bc
make[2]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/build-11'
make[1]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg'
   dh_installdocs -a -O--buildsystem=cmake -O--parallel
   debian/rules override_dh_installchangelogs
make[1]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg'
dh_installchangelogs ReleaseNotes.md
make[1]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg'
   debian/rules override_dh_python2
make[1]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg'
dh_python2 -ppython-rdkit
I: dh_python2 fs:329: renaming rdBase.so to rdBase.arm-linux-gnueabihf.so
/usr/share/dh-python/dh_python2:67: DeprecationWarning: The 'warn' method is deprecated, use 'warning' instead
  'libpython%s: %s', so_version, fn)
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdBase.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdChemReactions.so to rdChemReactions.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdChemReactions.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdChemicalFeatures.so to rdChemicalFeatures.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdChemicalFeatures.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdDepictor.so to rdDepictor.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdDepictor.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdDistGeom.so to rdDistGeom.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdDistGeom.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdFMCS.so to rdFMCS.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdFMCS.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdFingerprintGenerator.so to rdFingerprintGenerator.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdFingerprintGenerator.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdForceFieldHelpers.so to rdForceFieldHelpers.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdForceFieldHelpers.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdMMPA.so to rdMMPA.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdMMPA.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdMolAlign.so to rdMolAlign.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdMolAlign.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdMolCatalog.so to rdMolCatalog.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdMolCatalog.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdMolChemicalFeatures.so to rdMolChemicalFeatures.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdMolChemicalFeatures.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdMolDescriptors.so to rdMolDescriptors.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdMolDescriptors.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdMolHash.so to rdMolHash.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdMolHash.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdMolInterchange.so to rdMolInterchange.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdMolInterchange.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdMolTransforms.so to rdMolTransforms.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdMolTransforms.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdPartialCharges.so to rdPartialCharges.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdPartialCharges.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdRGroupDecomposition.so to rdRGroupDecomposition.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdRGroupDecomposition.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdReducedGraphs.so to rdReducedGraphs.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdReducedGraphs.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdSLNParse.so to rdSLNParse.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdSLNParse.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdShapeHelpers.so to rdShapeHelpers.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdShapeHelpers.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdStructChecker.so to rdStructChecker.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdStructChecker.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdSubstructLibrary.so to rdSubstructLibrary.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdSubstructLibrary.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdchem.so to rdchem.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdchem.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdfiltercatalog.so to rdfiltercatalog.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdfiltercatalog.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdfragcatalog.so to rdfragcatalog.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdfragcatalog.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdmolfiles.so to rdmolfiles.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdmolfiles.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdmolops.so to rdmolops.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdmolops.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdqueries.so to rdqueries.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdqueries.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdtrajectory.so to rdtrajectory.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdtrajectory.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdMolDraw2D.so to rdMolDraw2D.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdMolDraw2D.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdMolStandardize.so to rdMolStandardize.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdMolStandardize.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdMetricMatrixCalc.so to rdMetricMatrixCalc.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdMetricMatrixCalc.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming cDataStructs.so to cDataStructs.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: cDataStructs.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming DistGeom.so to DistGeom.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: DistGeom.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdForceField.so to rdForceField.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdForceField.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdGeometry.so to rdGeometry.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdGeometry.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming Clustering.so to Clustering.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: Clustering.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming cQuantize.so to cQuantize.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: cQuantize.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdInfoTheory.so to rdInfoTheory.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdInfoTheory.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdAlignment.so to rdAlignment.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdAlignment.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdSimDivPickers.so to rdSimDivPickers.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdSimDivPickers.arm-linux-gnueabihf.so
dh_numpy -ppython-rdkit
make[1]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg'
   dh_installinit -a -O--buildsystem=cmake -O--parallel
   dh_lintian -a -O--buildsystem=cmake -O--parallel
   dh_perl -a -O--buildsystem=cmake -O--parallel
   dh_link -a -O--buildsystem=cmake -O--parallel
   dh_strip_nondeterminism -a -O--buildsystem=cmake -O--parallel
   dh_compress -a -O--buildsystem=cmake -O--parallel
   dh_fixperms -a -O--buildsystem=cmake -O--parallel
   dh_missing -a -O--buildsystem=cmake -O--parallel
   dh_strip -a -O--buildsystem=cmake -O--parallel
   dh_makeshlibs -a -O--buildsystem=cmake -O--parallel
   dh_shlibdeps -a -O--buildsystem=cmake -O--parallel
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMMPA.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitDistGeometry.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitAlignment.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitReducedGraphs.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitFragCatalog.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitTrajectory.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitRDGeometryLib.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitFMCS.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitChemicalFeatures.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitSubstructMatch.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitFileParsers.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitInfoTheory.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitDepictor.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitRDBoost.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitFilterCatalog.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitSLNParse.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitSubgraphs.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitFingerprints.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitChemTransforms.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitGraphMol.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitRGroupDecomposition.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitEigenSolvers.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitStructChecker.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitForceFieldHelpers.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolStandardize.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitSubstructLibrary.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitDescriptors.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitSimDivPickers.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolTransforms.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitCatalogs.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitPartialCharges.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolChemicalFeatures.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolAlign.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitDataStructs.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitSmilesParse.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolHash.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitForceField.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolInterchange.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitDistGeomHelpers.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitOptimizer.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitShapeHelpers.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolDraw2D.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolCatalog.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitChemReactions.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitRDGeneral.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/librdkit1/usr/lib/libRDKitDistGeometry.so.1.2018.09.1 debian/librdkit1/usr/lib/libRDKitForceFieldHelpers.so.1.2018.09.1 debian/librdkit1/usr/lib/libRDKitMolAlign.so.1.2018.09.1 debian/librdkit1/usr/lib/libRDKitForceField.so.1.2018.09.1 debian/librdkit1/usr/lib/libRDKitDistGeomHelpers.so.1.2018.09.1 were not linked against libRDKitOptimizer.so.1 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/librdkit1/usr/lib/libRDKitDistGeometry.so.1.2018.09.1 debian/librdkit1/usr/lib/libRDKitForceFieldHelpers.so.1.2018.09.1 debian/librdkit1/usr/lib/libRDKitMolAlign.so.1.2018.09.1 debian/librdkit1/usr/lib/libRDKitForceField.so.1.2018.09.1 debian/librdkit1/usr/lib/libRDKitDistGeomHelpers.so.1.2018.09.1 debian/librdkit1/usr/lib/libRDKitOptimizer.so.1.2018.09.1 were not linked against libRDKitTrajectory.so.1 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolAlign.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/ForceField/rdForceField.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/DistanceGeometry/DistGeom.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdForceFieldHelpers.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdDistGeom.arm-linux-gnueabihf.so were not linked against libRDKitOptimizer.so.1 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdSLNParse.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdtrajectory.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdChemicalFeatures.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolAlign.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdchem.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolInterchange.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdSubstructLibrary.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolTransforms.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdqueries.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdmolfiles.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/Draw/rdMolDraw2D.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdFMCS.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolChemicalFeatures.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/ForceField/rdForceField.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/DistanceGeometry/DistGeom.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/MolStandardize/rdMolStandardize.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdfragcatalog.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdDepictor.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMMPA.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdmolops.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolHash.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdPartialCharges.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdForceFieldHelpers.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdFingerprintGenerator.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdDistGeom.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolCatalog.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdChemReactions.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdfiltercatalog.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolDescriptors.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdShapeHelpers.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdReducedGraphs.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdRGroupDecomposition.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdStructChecker.arm-linux-gnueabihf.so were not linked against libcoordgenlibs.so.1 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolAlign.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolTransforms.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/Draw/rdMolDraw2D.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/DistanceGeometry/DistGeom.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/MolStandardize/rdMolStandardize.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdmolops.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolHash.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdDistGeom.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdChemReactions.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolDescriptors.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdShapeHelpers.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdStructChecker.arm-linux-gnueabihf.so were not linked against libRDKitEigenSolvers.so.1 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdSLNParse.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/rdBase.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdtrajectory.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdChemicalFeatures.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolAlign.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdchem.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolInterchange.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdSubstructLibrary.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolTransforms.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdqueries.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdmolfiles.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/Draw/rdMolDraw2D.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdFMCS.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Geometry/rdGeometry.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolChemicalFeatures.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/ForceField/rdForceField.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/ML/InfoTheory/rdInfoTheory.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/DistanceGeometry/DistGeom.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/MolStandardize/rdMolStandardize.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdfragcatalog.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/SimDivFilters/rdSimDivPickers.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Numerics/rdAlignment.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdDepictor.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/ML/Cluster/Clustering.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMMPA.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdmolops.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolHash.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdPartialCharges.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdForceFieldHelpers.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/DataManip/Metric/rdMetricMatrixCalc.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdFingerprintGenerator.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdDistGeom.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolCatalog.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/DataStructs/cDataStructs.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdChemReactions.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdfiltercatalog.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolDescriptors.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdShapeHelpers.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdReducedGraphs.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdRGroupDecomposition.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/ML/Data/cQuantize.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdStructChecker.arm-linux-gnueabihf.so were not linked against libboost_serialization.so.1.67.0 (they use none of the library's symbols)
   dh_installdeb -a -O--buildsystem=cmake -O--parallel
   dh_gencontrol -a -O--buildsystem=cmake -O--parallel
dpkg-gencontrol: warning: Depends field of package librdkit-dev: substitution variable ${shlibs:Depends} used, but is not defined
dpkg-gencontrol: warning: package librdkit1: substitution variable ${python:Depends} unused, but is defined
dpkg-gencontrol: warning: package postgresql-11-rdkit: substitution variable ${python:Depends} unused, but is defined
dpkg-gencontrol: warning: package librdkit-dev: substitution variable ${python:Depends} unused, but is defined
dpkg-gencontrol: warning: package postgresql-11-rdkit: substitution variable ${python:Depends} unused, but is defined
dpkg-gencontrol: warning: package librdkit1: substitution variable ${python:Depends} unused, but is defined
   dh_md5sums -a -O--buildsystem=cmake -O--parallel
   dh_builddeb -a -O--buildsystem=cmake -O--parallel
dpkg-deb: building package 'postgresql-11-rdkit-dbgsym' in '../postgresql-11-rdkit-dbgsym_201809.1+dfsg-6_armhf.deb'.
dpkg-deb: building package 'python-rdkit' in '../python-rdkit_201809.1+dfsg-6_armhf.deb'.
dpkg-deb: building package 'librdkit-dev' in '../librdkit-dev_201809.1+dfsg-6_armhf.deb'.
dpkg-deb: building package 'librdkit1' in '../librdkit1_201809.1+dfsg-6_armhf.deb'.
dpkg-deb: building package 'postgresql-11-rdkit' in '../postgresql-11-rdkit_201809.1+dfsg-6_armhf.deb'.
dpkg-deb: building package 'librdkit1-dbgsym' in '../librdkit1-dbgsym_201809.1+dfsg-6_armhf.deb'.
dpkg-deb: building package 'python-rdkit-dbgsym' in '../python-rdkit-dbgsym_201809.1+dfsg-6_armhf.deb'.
 dpkg-genbuildinfo --build=any
 dpkg-genchanges --build=any -mRaspbian wandboard test autobuilder <root@raspbian.org> >../rdkit_201809.1+dfsg-6_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2019-02-04T12:25:44Z

Finished
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I: Built successfully

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| Post Build Chroot                                                            |
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| Changes                                                                      |
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rdkit_201809.1+dfsg-6_armhf.changes:
------------------------------------

Format: 1.8
Date: Thu, 31 Jan 2019 14:20:27 +0100
Source: rdkit
Binary: python-rdkit rdkit-doc rdkit-data librdkit1 librdkit-dev postgresql-11-rdkit
Architecture: armhf
Version: 201809.1+dfsg-6
Distribution: buster-staging
Urgency: medium
Maintainer: Raspbian wandboard test autobuilder <root@raspbian.org>
Changed-By: Michael Banck <mbanck@debian.org>
Description:
 librdkit-dev - Collection of cheminformatics and machine-learning software (deve
 librdkit1  - Collection of cheminformatics and machine-learning software (shar
 postgresql-11-rdkit - Cheminformatics and machine-learning software (PostgreSQL Cartrid
 python-rdkit - Collection of cheminformatics and machine-learning software
 rdkit-data - Collection of cheminformatics and machine-learning software (data
 rdkit-doc  - Collection of cheminformatics and machine-learning software (docu
Changes:
 rdkit (201809.1+dfsg-6) unstable; urgency=medium
 .
   * debian/patches/fix_coordgen_include_path.patch: New patch, fixes the
     include path for system-installed coordgen headers.
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| Package contents                                                             |
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librdkit-dev_201809.1+dfsg-6_armhf.deb
--------------------------------------

 new Debian package, version 2.0.
 size 296556 bytes: control archive=8748 bytes.
    1512 bytes,    37 lines      control              
   24511 bytes,   293 lines      md5sums              
 Package: librdkit-dev
 Source: rdkit
 Version: 201809.1+dfsg-6
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 1790
 Depends: librdkit1 (= 201809.1+dfsg-6)
 Section: libdevel
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Collection of cheminformatics and machine-learning software (development files)
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.  Features Include:
  .
   * Chemical reaction handling and transforms
   * Substructure searching with SMARTS
   * Canonical SMILES
   * Molecule-molecule alignment
   * Large number of molecular descriptors, including topological,
     compositional, EState, SlogP/SMR, VSA and Feature-map vectors
   * Fragmentation using RECAP rules
   * 2D coordinate generation and depiction, including constrained depiction
   * 3D coordinate generation using geometry embedding
   * UFF and MMFF94 forcefields
   * Chirality support, including calculation of (R/S) stereochemistry codes
   * 2D pharmacophore searching
   * Fingerprinting, including Daylight-like, atom pairs, topological
     torsions, Morgan algorithm and MACCS keys
   * Calculation of shape similarity
   * Multi-molecule maximum common substructure
   * Machine-learning via clustering and information theory algorithms
   * Gasteiger-Marsili partial charge calculation
  .
  File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit
  binary format.
  .
  This package contains the header files.

drwxr-xr-x root/root         0 2019-01-31 13:20 ./
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/include/
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/include/rdkit/
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/include/rdkit/Catalogs/
-rw-r--r-- root/root     16620 2018-10-22 02:29 ./usr/include/rdkit/Catalogs/Catalog.h
-rw-r--r-- root/root      1361 2018-10-22 02:29 ./usr/include/rdkit/Catalogs/CatalogEntry.h
-rw-r--r-- root/root      1221 2018-10-22 02:29 ./usr/include/rdkit/Catalogs/CatalogParams.h
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/include/rdkit/ChemicalFeatures/
-rw-r--r-- root/root      1021 2018-10-22 02:29 ./usr/include/rdkit/ChemicalFeatures/ChemicalFeature.h
-rw-r--r-- root/root      2814 2018-10-22 02:29 ./usr/include/rdkit/ChemicalFeatures/FreeChemicalFeature.h
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/include/rdkit/DataManip/
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/include/rdkit/DataManip/MetricMatrixCalc/
-rw-r--r-- root/root      1841 2018-10-22 02:29 ./usr/include/rdkit/DataManip/MetricMatrixCalc/MetricFuncs.h
-rw-r--r-- root/root      3506 2018-10-22 02:29 ./usr/include/rdkit/DataManip/MetricMatrixCalc/MetricMatrixCalc.h
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/include/rdkit/DataStructs/
-rw-r--r-- root/root     10600 2018-10-22 02:29 ./usr/include/rdkit/DataStructs/BitOps.h
-rw-r--r-- root/root      2509 2018-10-22 02:29 ./usr/include/rdkit/DataStructs/BitVect.h
-rw-r--r-- root/root      1115 2018-10-22 02:29 ./usr/include/rdkit/DataStructs/BitVectUtils.h
-rw-r--r-- root/root       584 2018-10-22 02:29 ./usr/include/rdkit/DataStructs/BitVects.h
-rw-r--r-- root/root       841 2018-10-22 02:29 ./usr/include/rdkit/DataStructs/DatastructsException.h
-rw-r--r-- root/root       844 2018-10-22 02:29 ./usr/include/rdkit/DataStructs/DiscreteDistMat.h
-rw-r--r-- root/root      4414 2018-10-22 02:29 ./usr/include/rdkit/DataStructs/DiscreteValueVect.h
-rw-r--r-- root/root      3242 2018-10-22 02:29 ./usr/include/rdkit/DataStructs/ExplicitBitVect.h
-rw-r--r-- root/root      9603 2018-10-22 02:29 ./usr/include/rdkit/DataStructs/FPBReader.h
-rw-r--r-- root/root      7646 2018-10-22 02:29 ./usr/include/rdkit/DataStructs/MultiFPBReader.h
-rw-r--r-- root/root      3013 2018-10-22 02:29 ./usr/include/rdkit/DataStructs/SparseBitVect.h
-rw-r--r-- root/root     16359 2018-10-22 02:29 ./usr/include/rdkit/DataStructs/SparseIntVect.h
-rw-r--r-- root/root      1252 2018-10-22 02:29 ./usr/include/rdkit/DataStructs/base64.h
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/include/rdkit/DistGeom/
-rw-r--r-- root/root      3429 2018-10-22 02:29 ./usr/include/rdkit/DistGeom/BoundsMatrix.h
-rw-r--r-- root/root      1630 2018-10-22 02:29 ./usr/include/rdkit/DistGeom/ChiralSet.h
-rw-r--r-- root/root      3549 2018-10-22 02:29 ./usr/include/rdkit/DistGeom/ChiralViolationContrib.h
-rw-r--r-- root/root      7992 2018-10-22 02:29 ./usr/include/rdkit/DistGeom/DistGeomUtils.h
-rw-r--r-- root/root      1825 2018-10-22 02:29 ./usr/include/rdkit/DistGeom/DistViolationContrib.h
-rw-r--r-- root/root      1979 2018-10-22 02:29 ./usr/include/rdkit/DistGeom/FourthDimContrib.h
-rw-r--r-- root/root      1183 2018-10-22 02:29 ./usr/include/rdkit/DistGeom/TriangleSmooth.h
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/include/rdkit/Features/
-rw-r--r-- root/root      2888 2018-10-22 02:29 ./usr/include/rdkit/Features/Feature.h
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/include/rdkit/ForceField/
-rw-r--r-- root/root      1100 2018-10-22 02:29 ./usr/include/rdkit/ForceField/Contrib.h
-rw-r--r-- root/root      7723 2018-10-22 02:29 ./usr/include/rdkit/ForceField/ForceField.h
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/include/rdkit/ForceField/MMFF/
-rw-r--r-- root/root      2557 2018-10-22 02:29 ./usr/include/rdkit/ForceField/MMFF/AngleBend.h
-rw-r--r-- root/root      2119 2018-10-22 02:29 ./usr/include/rdkit/ForceField/MMFF/AngleConstraint.h
-rw-r--r-- root/root      2126 2018-10-22 02:29 ./usr/include/rdkit/ForceField/MMFF/BondStretch.h
-rw-r--r-- root/root       663 2018-10-22 02:29 ./usr/include/rdkit/ForceField/MMFF/Contribs.h
-rw-r--r-- root/root      2025 2018-10-22 02:29 ./usr/include/rdkit/ForceField/MMFF/DistanceConstraint.h
-rw-r--r-- root/root      3713 2018-10-22 02:29 ./usr/include/rdkit/ForceField/MMFF/Nonbonded.h
-rw-r--r-- root/root      2163 2018-10-22 02:29 ./usr/include/rdkit/ForceField/MMFF/OopBend.h
-rw-r--r-- root/root     56048 2018-10-22 02:29 ./usr/include/rdkit/ForceField/MMFF/Params.h
-rw-r--r-- root/root      1649 2018-10-22 02:29 ./usr/include/rdkit/ForceField/MMFF/PositionConstraint.h
-rw-r--r-- root/root      2321 2018-10-22 02:29 ./usr/include/rdkit/ForceField/MMFF/StretchBend.h
-rw-r--r-- root/root      2753 2018-10-22 02:29 ./usr/include/rdkit/ForceField/MMFF/TorsionAngle.h
-rw-r--r-- root/root      2404 2018-10-22 02:29 ./usr/include/rdkit/ForceField/MMFF/TorsionConstraint.h
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/include/rdkit/ForceField/UFF/
-rw-r--r-- root/root      3433 2018-10-22 02:29 ./usr/include/rdkit/ForceField/UFF/AngleBend.h
-rw-r--r-- root/root      2091 2018-10-22 02:29 ./usr/include/rdkit/ForceField/UFF/AngleConstraint.h
-rw-r--r-- root/root      2511 2018-10-22 02:29 ./usr/include/rdkit/ForceField/UFF/BondStretch.h
-rw-r--r-- root/root       599 2018-10-22 02:29 ./usr/include/rdkit/ForceField/UFF/Contribs.h
-rw-r--r-- root/root      2022 2018-10-22 02:29 ./usr/include/rdkit/ForceField/UFF/DistanceConstraint.h
-rw-r--r-- root/root      2583 2018-10-22 02:29 ./usr/include/rdkit/ForceField/UFF/Inversion.h
-rw-r--r-- root/root      2852 2018-10-22 02:29 ./usr/include/rdkit/ForceField/UFF/Nonbonded.h
-rw-r--r-- root/root      4467 2018-10-22 02:29 ./usr/include/rdkit/ForceField/UFF/Params.h
-rw-r--r-- root/root      1646 2018-10-22 02:29 ./usr/include/rdkit/ForceField/UFF/PositionConstraint.h
-rw-r--r-- root/root      4255 2018-10-22 02:29 ./usr/include/rdkit/ForceField/UFF/TorsionAngle.h
-rw-r--r-- root/root      2377 2018-10-22 02:29 ./usr/include/rdkit/ForceField/UFF/TorsionConstraint.h
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/include/rdkit/Geometry/
-rw-r--r-- root/root      1538 2018-10-22 02:29 ./usr/include/rdkit/Geometry/Grid3D.h
-rw-r--r-- root/root      1898 2018-10-22 02:29 ./usr/include/rdkit/Geometry/GridUtils.h
-rw-r--r-- root/root       449 2018-10-22 02:29 ./usr/include/rdkit/Geometry/Transform.h
-rw-r--r-- root/root      2584 2018-10-22 02:29 ./usr/include/rdkit/Geometry/Transform2D.h
-rw-r--r-- root/root      2770 2018-10-22 02:29 ./usr/include/rdkit/Geometry/Transform3D.h
-rw-r--r-- root/root      8230 2018-10-22 02:29 ./usr/include/rdkit/Geometry/UniformGrid3D.h
-rw-r--r-- root/root      3313 2018-10-22 02:29 ./usr/include/rdkit/Geometry/Utils.h
-rw-r--r-- root/root     13897 2018-10-22 02:29 ./usr/include/rdkit/Geometry/point.h
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/include/rdkit/GraphMol/
-rw-r--r-- root/root     14055 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/Atom.h
-rw-r--r-- root/root      5607 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/AtomIterators.h
-rw-r--r-- root/root     10405 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/Bond.h
-rw-r--r-- root/root      2342 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/BondIterators.h
-rw-r--r-- root/root      3889 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/Canon.h
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/include/rdkit/GraphMol/ChemReactions/
-rw-r--r-- root/root      4690 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/ChemReactions/CartesianProduct.h
-rw-r--r-- root/root      6454 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/ChemReactions/Enumerate.h
-rw-r--r-- root/root      6978 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/ChemReactions/EnumerateBase.h
-rw-r--r-- root/root      2678 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/ChemReactions/EnumerationPickler.h
-rw-r--r-- root/root      8145 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/ChemReactions/EnumerationStrategyBase.h
-rw-r--r-- root/root      3126 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/ChemReactions/PreprocessRxn.h
-rw-r--r-- root/root      5421 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/ChemReactions/RandomSample.h
-rw-r--r-- root/root      6149 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/ChemReactions/RandomSampleAllBBs.h
-rw-r--r-- root/root     18649 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/ChemReactions/Reaction.h
-rw-r--r-- root/root      5929 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/ChemReactions/ReactionFingerprints.h
-rw-r--r-- root/root      5219 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/ChemReactions/ReactionParser.h
-rw-r--r-- root/root      4269 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/ChemReactions/ReactionPickler.h
-rw-r--r-- root/root      4768 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/ChemReactions/ReactionRunner.h
-rw-r--r-- root/root      3376 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/ChemReactions/ReactionUtils.h
-rw-r--r-- root/root      6528 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/ChemReactions/SanitizeRxn.h
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/include/rdkit/GraphMol/ChemTransforms/
-rw-r--r-- root/root     11502 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/ChemTransforms/ChemTransforms.h
-rw-r--r-- root/root      4185 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/ChemTransforms/MolFragmenter.h
-rw-r--r-- root/root       911 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/Chirality.h
-rw-r--r-- root/root      4491 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/Conformer.h
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/include/rdkit/GraphMol/Depictor/
-rw-r--r-- root/root     12009 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/Depictor/DepictUtils.h
-rw-r--r-- root/root     19091 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/Depictor/EmbeddedFrag.h
-rw-r--r-- root/root      7705 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/Depictor/RDDepictor.h
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/include/rdkit/GraphMol/Descriptors/
-rw-r--r-- root/root      2032 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/Descriptors/AUTOCORR2D.h
-rw-r--r-- root/root      7240 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/Descriptors/ConnectivityDescriptors.h
-rw-r--r-- root/root      4586 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/Descriptors/Crippen.h
-rw-r--r-- root/root      2116 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/Descriptors/Data3Ddescriptors.h
-rw-r--r-- root/root      6893 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/Descriptors/Lipinski.h
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-rw-r--r-- root/root      4959 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/Descriptors/USRDescriptor.h
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/include/rdkit/GraphMol/DistGeomHelpers/
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-rw-r--r-- root/root     19887 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/DistGeomHelpers/Embedder.h
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/include/rdkit/GraphMol/FMCS/
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-rw-r--r-- root/root      5734 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/FMCS/SubstructureCache.h
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/include/rdkit/GraphMol/FileParsers/
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-rw-r--r-- root/root      1434 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/FileParsers/MolFileStereochem.h
-rw-r--r-- root/root     14595 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/FileParsers/MolSupplier.h
-rw-r--r-- root/root     10821 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/FileParsers/MolWriters.h
-rw-r--r-- root/root      3476 2018-10-22 02:29 ./usr/include/rdkit/GraphMol/FileParsers/SequenceParsers.h
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lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitDepictor.so -> libRDKitDepictor.so.1
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lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitDistGeomHelpers.so -> libRDKitDistGeomHelpers.so.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitDistGeometry.so -> libRDKitDistGeometry.so.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitEigenSolvers.so -> libRDKitEigenSolvers.so.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitFMCS.so -> libRDKitFMCS.so.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitFileParsers.so -> libRDKitFileParsers.so.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitFilterCatalog.so -> libRDKitFilterCatalog.so.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitFingerprints.so -> libRDKitFingerprints.so.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitForceField.so -> libRDKitForceField.so.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitForceFieldHelpers.so -> libRDKitForceFieldHelpers.so.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitFragCatalog.so -> libRDKitFragCatalog.so.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitGraphMol.so -> libRDKitGraphMol.so.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitInfoTheory.so -> libRDKitInfoTheory.so.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitMMPA.so -> libRDKitMMPA.so.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitMolAlign.so -> libRDKitMolAlign.so.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitMolCatalog.so -> libRDKitMolCatalog.so.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitMolChemicalFeatures.so -> libRDKitMolChemicalFeatures.so.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitMolDraw2D.so -> libRDKitMolDraw2D.so.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitMolHash.so -> libRDKitMolHash.so.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitMolInterchange.so -> libRDKitMolInterchange.so.1
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lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitOptimizer.so -> libRDKitOptimizer.so.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitPartialCharges.so -> libRDKitPartialCharges.so.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitRDBoost.so -> libRDKitRDBoost.so.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitRDGeneral.so -> libRDKitRDGeneral.so.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitRDGeometryLib.so -> libRDKitRDGeometryLib.so.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitRGroupDecomposition.so -> libRDKitRGroupDecomposition.so.1
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lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitShapeHelpers.so -> libRDKitShapeHelpers.so.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitSimDivPickers.so -> libRDKitSimDivPickers.so.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitSmilesParse.so -> libRDKitSmilesParse.so.1
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lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitSubgraphs.so -> libRDKitSubgraphs.so.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitSubstructLibrary.so -> libRDKitSubstructLibrary.so.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitSubstructMatch.so -> libRDKitSubstructMatch.so.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitTrajectory.so -> libRDKitTrajectory.so.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKithc.so -> libRDKithc.so.1
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/share/
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/share/doc/
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/share/doc/librdkit-dev/
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librdkit1-dbgsym_201809.1+dfsg-6_armhf.deb
------------------------------------------

 new Debian package, version 2.0.
 size 68418812 bytes: control archive=2612 bytes.
    2219 bytes,    12 lines      control              
    4876 bytes,    46 lines      md5sums              
 Package: librdkit1-dbgsym
 Source: rdkit
 Version: 201809.1+dfsg-6
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 70018
 Depends: librdkit1 (= 201809.1+dfsg-6)
 Section: debug
 Priority: optional
 Description: debug symbols for librdkit1
 Build-Ids: 00db5b51c22721a92ddc2ddba151bd6f2fb6ff9f 13d91eed2911d4e045ca3afdeddc1e332b9730bb 162eda2ff57d7a82a65768a29b88538dbb0516ba 174a82d56f64cf1d8aa4c7d3bf20067b94e225c1 1de9dfebf735298ed8dcdd0ebb065f6f7fe57581 1edf9b80e286140f08d7e7af3e76abecd8e4f43e 208956904ef2595c0aca97504566bccdecd938db 2553af157f8eddcf51c0b97c34d398b8614ef323 392a2fdb4d60cf1be2c3d8295b35648b4f904466 46bfe0d2026f8f3f0fbe8f8d818deb0c3dc6e65c 49f1e9592cf09684a25bb75f79601b324304f0f0 54af228b683998e99c3fc2d44f90877d4bfb6072 5b258292eee5f0140645b1d73e5c8b15576c9e30 5b3fa4562bec41d4d94d6452f793f96649c61efa 72a0175f1145b0f3287ed50627cf2df0bb38fe80 75306a5320c3b3e4d7e15e7eb5de1f60a066f93e 7b7b6eb481fd7a0f3d876c88d3a21ee1b2d8c2b8 7f2047fcd001d0655978dfedf42a625b0f04a223 83443f8dc79e678867ee4e6fc51a80d3883e0579 83b1f83fedfa7325921e80045600b9d8ae94504d 8979a52d32017bc537fbca8bd33c2ae3574a21c3 8a3e65bc17ef70041ede8a0458d3d4ea9249859e 8ef6d1f61ff0475eee127a7e17eb2cc6a027279d 8f45dc030205e0543368848d5045679b6387696e 984ebb473335e5c85fe762a58773d7ab0c380973 a90f1e7cf02f646723c5aa60bbce8819ee37f34d ad8f3cf713b9105308e2471b9325e23293d403a9 aed20b8d7b248f855a0a4f14f36d2920a45990a3 b3ed18bd13af08e11cebad19b6f54c41e9ebe5b2 b604ca743bce978789d1aed871e0944f08b50f99 b8fd1d8e3d6d76ae261d8961d42c007118060e32 b991ee07534b74f65786446858f5f704121acb9f bfe0d56a926e695f95e6eb2e5c3ca9ab53dc1ab2 c4c3f3479b311c5d30278eba38123327954262da c6523ca0361e257fdc2ed50400e9af9d4ec034ae c6e9e6b9401d7704ab03d2819a4d19edde5430f5 cda0b889bd33e7163705868aff9dbc2e82dcdc66 cee89b536be1826c61b2a895b39c5a8dea72d5cd d00b1bc27a1d533273c83b84d77fd8a7ba318a46 d3195e412ff7acfccbb6fd21aac7f4722cf83fe5 d4ff85dc468be3c959f505dd995f7c793f71ad3e d69c7836ad3fd6ede5cb589abd70c0d5332609d1 da99f377d034584c038719e7f45bde8508ff6b26 de4a9059d68d4777d89cd420e3805e2135beb079 df51d622fc128ccac7a758dc1938ee726e00d823 fd5a212f778ff8075d158579372000a69cf03737

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-rw-r--r-- root/root    873424 2019-01-31 13:20 ./usr/lib/debug/.build-id/ce/e89b536be1826c61b2a895b39c5a8dea72d5cd.debug
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/lib/debug/.build-id/d0/
-rw-r--r-- root/root    153360 2019-01-31 13:20 ./usr/lib/debug/.build-id/d0/0b1bc27a1d533273c83b84d77fd8a7ba318a46.debug
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/lib/debug/.build-id/d3/
-rw-r--r-- root/root   2110796 2019-01-31 13:20 ./usr/lib/debug/.build-id/d3/195e412ff7acfccbb6fd21aac7f4722cf83fe5.debug
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/lib/debug/.build-id/d4/
-rw-r--r-- root/root    522716 2019-01-31 13:20 ./usr/lib/debug/.build-id/d4/ff85dc468be3c959f505dd995f7c793f71ad3e.debug
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/lib/debug/.build-id/d6/
-rw-r--r-- root/root   1096424 2019-01-31 13:20 ./usr/lib/debug/.build-id/d6/9c7836ad3fd6ede5cb589abd70c0d5332609d1.debug
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/lib/debug/.build-id/da/
-rw-r--r-- root/root   2545732 2019-01-31 13:20 ./usr/lib/debug/.build-id/da/99f377d034584c038719e7f45bde8508ff6b26.debug
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/lib/debug/.build-id/de/
-rw-r--r-- root/root   4965620 2019-01-31 13:20 ./usr/lib/debug/.build-id/de/4a9059d68d4777d89cd420e3805e2135beb079.debug
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/lib/debug/.build-id/df/
-rw-r--r-- root/root    624628 2019-01-31 13:20 ./usr/lib/debug/.build-id/df/51d622fc128ccac7a758dc1938ee726e00d823.debug
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/lib/debug/.build-id/fd/
-rw-r--r-- root/root   2619304 2019-01-31 13:20 ./usr/lib/debug/.build-id/fd/5a212f778ff8075d158579372000a69cf03737.debug
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/share/
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/share/doc/
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/share/doc/librdkit1-dbgsym -> librdkit1


librdkit1_201809.1+dfsg-6_armhf.deb
-----------------------------------

 new Debian package, version 2.0.
 size 2274520 bytes: control archive=2864 bytes.
    1668 bytes,    37 lines      control              
    3840 bytes,    50 lines      md5sums              
    1481 bytes,    46 lines      shlibs               
      63 bytes,     2 lines      triggers             
 Package: librdkit1
 Source: rdkit
 Version: 201809.1+dfsg-6
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 10040
 Depends: libboost-python1.67.0, libboost-serialization1.67.0, libc6 (>= 2.4), libgcc1 (>= 1:3.5), libpython2.7 (>= 2.7), libschroedinger-coordgenlibs1, libschroedinger-maeparser1, libstdc++6 (>= 7)
 Section: libs
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Collection of cheminformatics and machine-learning software (shared libraries)
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.  Features Include:
  .
   * Chemical reaction handling and transforms
   * Substructure searching with SMARTS
   * Canonical SMILES
   * Molecule-molecule alignment
   * Large number of molecular descriptors, including topological,
     compositional, EState, SlogP/SMR, VSA and Feature-map vectors
   * Fragmentation using RECAP rules
   * 2D coordinate generation and depiction, including constrained depiction
   * 3D coordinate generation using geometry embedding
   * UFF and MMFF94 forcefields
   * Chirality support, including calculation of (R/S) stereochemistry codes
   * 2D pharmacophore searching
   * Fingerprinting, including Daylight-like, atom pairs, topological
     torsions, Morgan algorithm and MACCS keys
   * Calculation of shape similarity
   * Multi-molecule maximum common substructure
   * Machine-learning via clustering and information theory algorithms
   * Gasteiger-Marsili partial charge calculation
  .
  File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit
  binary format.
  .
  This package contains the shared libraries.

drwxr-xr-x root/root         0 2019-01-31 13:20 ./
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/lib/
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitAlignment.so.1 -> libRDKitAlignment.so.1.2018.09.1
-rw-r--r-- root/root     26276 2019-01-31 13:20 ./usr/lib/libRDKitAlignment.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitCatalogs.so.1 -> libRDKitCatalogs.so.1.2018.09.1
-rw-r--r-- root/root      5548 2019-01-31 13:20 ./usr/lib/libRDKitCatalogs.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitChemReactions.so.1 -> libRDKitChemReactions.so.1.2018.09.1
-rw-r--r-- root/root    808928 2019-01-31 13:20 ./usr/lib/libRDKitChemReactions.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitChemTransforms.so.1 -> libRDKitChemTransforms.so.1.2018.09.1
-rw-r--r-- root/root    199624 2019-01-31 13:20 ./usr/lib/libRDKitChemTransforms.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitChemicalFeatures.so.1 -> libRDKitChemicalFeatures.so.1.2018.09.1
-rw-r--r-- root/root      9748 2019-01-31 13:20 ./usr/lib/libRDKitChemicalFeatures.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitDataStructs.so.1 -> libRDKitDataStructs.so.1.2018.09.1
-rw-r--r-- root/root    236104 2019-01-31 13:20 ./usr/lib/libRDKitDataStructs.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitDepictor.so.1 -> libRDKitDepictor.so.1.2018.09.1
-rw-r--r-- root/root    195428 2019-01-31 13:20 ./usr/lib/libRDKitDepictor.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitDescriptors.so.1 -> libRDKitDescriptors.so.1.2018.09.1
-rw-r--r-- root/root    299100 2019-01-31 13:20 ./usr/lib/libRDKitDescriptors.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitDistGeomHelpers.so.1 -> libRDKitDistGeomHelpers.so.1.2018.09.1
-rw-r--r-- root/root    182932 2019-01-31 13:20 ./usr/lib/libRDKitDistGeomHelpers.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitDistGeometry.so.1 -> libRDKitDistGeometry.so.1.2018.09.1
-rw-r--r-- root/root    116612 2019-01-31 13:20 ./usr/lib/libRDKitDistGeometry.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitEigenSolvers.so.1 -> libRDKitEigenSolvers.so.1.2018.09.1
-rw-r--r-- root/root     22144 2019-01-31 13:20 ./usr/lib/libRDKitEigenSolvers.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitFMCS.so.1 -> libRDKitFMCS.so.1.2018.09.1
-rw-r--r-- root/root    232412 2019-01-31 13:20 ./usr/lib/libRDKitFMCS.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitFileParsers.so.1 -> libRDKitFileParsers.so.1.2018.09.1
-rw-r--r-- root/root    981240 2019-01-31 13:20 ./usr/lib/libRDKitFileParsers.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitFilterCatalog.so.1 -> libRDKitFilterCatalog.so.1.2018.09.1
-rw-r--r-- root/root    721644 2019-01-31 13:20 ./usr/lib/libRDKitFilterCatalog.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitFingerprints.so.1 -> libRDKitFingerprints.so.1.2018.09.1
-rw-r--r-- root/root    334688 2019-01-31 13:20 ./usr/lib/libRDKitFingerprints.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitForceField.so.1 -> libRDKitForceField.so.1.2018.09.1
-rw-r--r-- root/root    637440 2019-01-31 13:20 ./usr/lib/libRDKitForceField.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitForceFieldHelpers.so.1 -> libRDKitForceFieldHelpers.so.1.2018.09.1
-rw-r--r-- root/root    347144 2019-01-31 13:20 ./usr/lib/libRDKitForceFieldHelpers.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitFragCatalog.so.1 -> libRDKitFragCatalog.so.1.2018.09.1
-rw-r--r-- root/root    137524 2019-01-31 13:20 ./usr/lib/libRDKitFragCatalog.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitGraphMol.so.1 -> libRDKitGraphMol.so.1.2018.09.1
-rw-r--r-- root/root   1189836 2019-01-31 13:20 ./usr/lib/libRDKitGraphMol.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitInfoTheory.so.1 -> libRDKitInfoTheory.so.1.2018.09.1
-rw-r--r-- root/root     34624 2019-01-31 13:20 ./usr/lib/libRDKitInfoTheory.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitMMPA.so.1 -> libRDKitMMPA.so.1.2018.09.1
-rw-r--r-- root/root     63420 2019-01-31 13:20 ./usr/lib/libRDKitMMPA.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitMolAlign.so.1 -> libRDKitMolAlign.so.1.2018.09.1
-rw-r--r-- root/root    166384 2019-01-31 13:20 ./usr/lib/libRDKitMolAlign.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitMolCatalog.so.1 -> libRDKitMolCatalog.so.1.2018.09.1
-rw-r--r-- root/root     34544 2019-01-31 13:20 ./usr/lib/libRDKitMolCatalog.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitMolChemicalFeatures.so.1 -> libRDKitMolChemicalFeatures.so.1.2018.09.1
-rw-r--r-- root/root    112868 2019-01-31 13:20 ./usr/lib/libRDKitMolChemicalFeatures.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitMolDraw2D.so.1 -> libRDKitMolDraw2D.so.1.2018.09.1
-rw-r--r-- root/root    339488 2019-01-31 13:20 ./usr/lib/libRDKitMolDraw2D.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitMolHash.so.1 -> libRDKitMolHash.so.1.2018.09.1
-rw-r--r-- root/root     96328 2019-01-31 13:20 ./usr/lib/libRDKitMolHash.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitMolInterchange.so.1 -> libRDKitMolInterchange.so.1.2018.09.1
-rw-r--r-- root/root    195080 2019-01-31 13:20 ./usr/lib/libRDKitMolInterchange.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitMolStandardize.so.1 -> libRDKitMolStandardize.so.1.2018.09.1
-rw-r--r-- root/root    396220 2019-01-31 13:20 ./usr/lib/libRDKitMolStandardize.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitMolTransforms.so.1 -> libRDKitMolTransforms.so.1.2018.09.1
-rw-r--r-- root/root     67436 2019-01-31 13:20 ./usr/lib/libRDKitMolTransforms.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitOptimizer.so.1 -> libRDKitOptimizer.so.1.2018.09.1
-rw-r--r-- root/root      5432 2019-01-31 13:20 ./usr/lib/libRDKitOptimizer.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitPartialCharges.so.1 -> libRDKitPartialCharges.so.1.2018.09.1
-rw-r--r-- root/root     63448 2019-01-31 13:20 ./usr/lib/libRDKitPartialCharges.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitRDBoost.so.1 -> libRDKitRDBoost.so.1.2018.09.1
-rw-r--r-- root/root      9712 2019-01-31 13:20 ./usr/lib/libRDKitRDBoost.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitRDGeneral.so.1 -> libRDKitRDGeneral.so.1.2018.09.1
-rw-r--r-- root/root     84296 2019-01-31 13:20 ./usr/lib/libRDKitRDGeneral.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitRDGeometryLib.so.1 -> libRDKitRDGeometryLib.so.1.2018.09.1
-rw-r--r-- root/root    104480 2019-01-31 13:20 ./usr/lib/libRDKitRDGeometryLib.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitRGroupDecomposition.so.1 -> libRDKitRGroupDecomposition.so.1.2018.09.1
-rw-r--r-- root/root    129440 2019-01-31 13:20 ./usr/lib/libRDKitRGroupDecomposition.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitReducedGraphs.so.1 -> libRDKitReducedGraphs.so.1.2018.09.1
-rw-r--r-- root/root     63448 2019-01-31 13:20 ./usr/lib/libRDKitReducedGraphs.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitSLNParse.so.1 -> libRDKitSLNParse.so.1.2018.09.1
-rw-r--r-- root/root    299080 2019-01-31 13:20 ./usr/lib/libRDKitSLNParse.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitShapeHelpers.so.1 -> libRDKitShapeHelpers.so.1.2018.09.1
-rw-r--r-- root/root     22192 2019-01-31 13:20 ./usr/lib/libRDKitShapeHelpers.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitSimDivPickers.so.1 -> libRDKitSimDivPickers.so.1.2018.09.1
-rw-r--r-- root/root     22140 2019-01-31 13:20 ./usr/lib/libRDKitSimDivPickers.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitSmilesParse.so.1 -> libRDKitSmilesParse.so.1.2018.09.1
-rw-r--r-- root/root    446144 2019-01-31 13:20 ./usr/lib/libRDKitSmilesParse.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitStructChecker.so.1 -> libRDKitStructChecker.so.1.2018.09.1
-rw-r--r-- root/root    336256 2019-01-31 13:20 ./usr/lib/libRDKitStructChecker.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitSubgraphs.so.1 -> libRDKitSubgraphs.so.1.2018.09.1
-rw-r--r-- root/root     63500 2019-01-31 13:20 ./usr/lib/libRDKitSubgraphs.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitSubstructLibrary.so.1 -> libRDKitSubstructLibrary.so.1.2018.09.1
-rw-r--r-- root/root     83944 2019-01-31 13:20 ./usr/lib/libRDKitSubstructLibrary.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitSubstructMatch.so.1 -> libRDKitSubstructMatch.so.1.2018.09.1
-rw-r--r-- root/root    133644 2019-01-31 13:20 ./usr/lib/libRDKitSubstructMatch.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKitTrajectory.so.1 -> libRDKitTrajectory.so.1.2018.09.1
-rw-r--r-- root/root     63388 2019-01-31 13:20 ./usr/lib/libRDKitTrajectory.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/lib/libRDKithc.so.1 -> libRDKithc.so.1.2018.09.1
-rw-r--r-- root/root      9480 2019-01-31 13:20 ./usr/lib/libRDKithc.so.1.2018.09.1
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/share/
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/share/doc/
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/share/doc/librdkit1/
-rw-r--r-- root/root      3839 2019-01-31 13:20 ./usr/share/doc/librdkit1/changelog.Debian.gz
-rw-r--r-- root/root     57914 2018-10-22 02:29 ./usr/share/doc/librdkit1/changelog.gz
-rw-r--r-- root/root      6729 2019-01-08 20:22 ./usr/share/doc/librdkit1/copyright
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/share/lintian/
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/share/lintian/overrides/
-rw-r--r-- root/root       107 2019-01-08 20:22 ./usr/share/lintian/overrides/librdkit1


postgresql-11-rdkit-dbgsym_201809.1+dfsg-6_armhf.deb
----------------------------------------------------

 new Debian package, version 2.0.
 size 935332 bytes: control archive=548 bytes.
     403 bytes,    12 lines      control              
     106 bytes,     1 lines      md5sums              
 Package: postgresql-11-rdkit-dbgsym
 Source: rdkit
 Version: 201809.1+dfsg-6
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 1003
 Depends: postgresql-11-rdkit (= 201809.1+dfsg-6)
 Section: debug
 Priority: optional
 Description: debug symbols for postgresql-11-rdkit
 Build-Ids: 85fac7d5a6ef66f7da773a85b6bdb075a6f170ff

drwxr-xr-x root/root         0 2019-01-31 13:20 ./
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/lib/
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/lib/debug/
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/lib/debug/.build-id/85/
-rw-r--r-- root/root   1016084 2019-01-31 13:20 ./usr/lib/debug/.build-id/85/fac7d5a6ef66f7da773a85b6bdb075a6f170ff.debug
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/share/
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/share/doc/
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/share/doc/postgresql-11-rdkit-dbgsym -> postgresql-11-rdkit


postgresql-11-rdkit_201809.1+dfsg-6_armhf.deb
---------------------------------------------

 new Debian package, version 2.0.
 size 385244 bytes: control archive=1696 bytes.
    1567 bytes,    37 lines      control              
    1667 bytes,    20 lines      md5sums              
 Package: postgresql-11-rdkit
 Source: rdkit
 Version: 201809.1+dfsg-6
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 898
 Depends: libc6 (>= 2.4), libgcc1 (>= 1:3.5), librdkit1, libstdc++6 (>= 5.2), postgresql-11
 Section: database
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Cheminformatics and machine-learning software (PostgreSQL Cartridge)
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.  Features Include:
  .
   * Chemical reaction handling and transforms
   * Substructure searching with SMARTS
   * Canonical SMILES
   * Molecule-molecule alignment
   * Large number of molecular descriptors, including topological,
     compositional, EState, SlogP/SMR, VSA and Feature-map vectors
   * Fragmentation using RECAP rules
   * 2D coordinate generation and depiction, including constrained depiction
   * 3D coordinate generation using geometry embedding
   * UFF and MMFF94 forcefields
   * Chirality support, including calculation of (R/S) stereochemistry codes
   * 2D pharmacophore searching
   * Fingerprinting, including Daylight-like, atom pairs, topological
     torsions, Morgan algorithm and MACCS keys
   * Calculation of shape similarity
   * Multi-molecule maximum common substructure
   * Machine-learning via clustering and information theory algorithms
   * Gasteiger-Marsili partial charge calculation
  .
  File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit
  binary format.
  .
  This package contains the PostgreSQL extension.

drwxr-xr-x root/root         0 2019-01-31 13:20 ./
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/lib/
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/lib/postgresql/
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/lib/postgresql/11/
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/lib/postgresql/11/lib/
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/lib/postgresql/11/lib/bitcode/
-rw-r--r-- root/root     35544 2019-01-31 13:20 ./usr/lib/postgresql/11/lib/bitcode/rdkit.index.bc
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/lib/postgresql/11/lib/bitcode/rdkit/
-rw-r--r-- root/root    349312 2019-01-31 13:20 ./usr/lib/postgresql/11/lib/bitcode/rdkit/adapter.bc
-rw-r--r-- root/root      6760 2019-01-31 13:20 ./usr/lib/postgresql/11/lib/bitcode/rdkit/bfp_gin.bc
-rw-r--r-- root/root     15460 2019-01-31 13:20 ./usr/lib/postgresql/11/lib/bitcode/rdkit/bfp_gist.bc
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drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/share/doc/
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/share/doc/postgresql-11-rdkit/
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-rw-r--r-- root/root      6729 2019-01-08 20:22 ./usr/share/doc/postgresql-11-rdkit/copyright
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python-rdkit-dbgsym_201809.1+dfsg-6_armhf.deb
---------------------------------------------

 new Debian package, version 2.0.
 size 47048252 bytes: control archive=2452 bytes.
    2084 bytes,    13 lines      control              
    4452 bytes,    42 lines      md5sums              
 Package: python-rdkit-dbgsym
 Source: rdkit
 Version: 201809.1+dfsg-6
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 52300
 Depends: python-rdkit (= 201809.1+dfsg-6)
 Section: debug
 Priority: optional
 Description: debug symbols for python-rdkit
 Build-Ids: 0229073abfd56a8fce5417345786934a6e9f3d45 083eae6379419de5d6ae42e8bc15e5887ac70e8a 116ef7ba73fe56b699998ec28a58c41684e1f6a9 12e972c2ee87fb259b92650a00daf9080f9db5f4 1fbbc9541fc34009aece3f549b6b630330227f6f 1fbcda8d51947efa7482aaa6a32c4b874863b822 22ed899ae2877e670e0ef4e53f6e1558289437ab 295e9b950452f764899e76255b340af9bb255ab1 2b195394d0a73fdb299b7434ed029c60288b0f3d 36a79716b3f517b1b2409c470a5f3625f814dc13 375ea6c0ed58aeb0b6e7d007a5e6f8a46c974c2d 38fc5a636468f867cc8576d66a8f1f536e59ab76 3db05b60021489758eda4a65b226d0879e4b5411 58603026708e7c554b019d5d87d14158d90bf32f 6184bbe3b676506e6e75e2c765153c5f84dbf8ec 67a99e5987f0c1035907f74ee95c6bbfe1c41b24 7029a1fcc1d9ff65f638505caec907bd1f2da0b3 818e62e909c8ac0b33a96e174a011a5c35cdd70d 88d0eacbf07cffec20fd9320e8bc1353e9f0db5f 8a0d480849b5dd99b69cecdd98f068e782f61e9d 9c8b3525e16b888b2d5fad926b8cd5d0db152712 9d8c35bb318923de435f1639204346a9fb36d81c a7cf8489d6bd4c7bbb6540ddce99aaf987355ac1 afc57104d7aaec192ec2c8c6ce2b8802c90e8356 b5fa02bdab35355542291d3478c6725c2244af99 c6b454001fa4aec84bf494f6b6cca261456962cc ca7fb7ea61c8f0c9bc9d6c7cb7e8cf22a3967e30 d223dea71d149c7d946922ca31f13c0186d04536 d3791a57994732256e8638da69ef331df610b145 d84286a4ff47979f811b70cb4cb777af631327e2 d9229a0d1aa4eb8aebc1478d8c8ef100e61347be d99dcb9f2aa90c7493ff91763641daa65b0e3f51 dc6f03ba5538d0433c926bd059004fb7d3413553 dd85cf3c963d8a6182d5c7d28af1fe6e5a4c41b0 e00521d972dac178e456651fd9cbdcaa72455859 e2f2fc6566a6fff79cfca1ef2478389106757b58 e5ea1e120a768e39d366247dedf4f37d2645239a e62924c0ad43798187afa34a4b3483b3f5bfee0f e6817d08ea68bedfe5eae993d49d0c264ac3017e eadb17ba378d6aa17a424a064f0d3db7752b8712 ebf1db8ae2d1e2807dd217e4c474bae0ce4236d0 f5b222566293b42baa256f122c23fd4d8201e7af
 Python-Version: 2.7

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lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/share/doc/python-rdkit-dbgsym -> python-rdkit


python-rdkit_201809.1+dfsg-6_armhf.deb
--------------------------------------

 new Debian package, version 2.0.
 size 2598052 bytes: control archive=12468 bytes.
    1844 bytes,    38 lines      control              
   45131 bytes,   452 lines      md5sums              
     162 bytes,     9 lines   *  postinst             #!/bin/sh
     263 bytes,    14 lines   *  prerm                #!/bin/sh
 Package: python-rdkit
 Source: rdkit
 Version: 201809.1+dfsg-6
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 14860
 Depends: fonts-freefont-ttf, rdkit-data, python (<< 2.8), python (>= 2.7~), python-numpy (>= 1:1.16.0~rc1), python-numpy-abi9, python:any (<< 2.8), python:any (>= 2.7~), libboost-python1.67.0, libboost-serialization1.67.0, libc6 (>= 2.4), libgcc1 (>= 1:3.5), libpython2.7 (>= 2.7), librdkit1, libschroedinger-coordgenlibs1, libschroedinger-maeparser1, libstdc++6 (>= 6)
 Suggests: rdkit-doc
 Provides: python2.7-rdkit
 Section: python
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Collection of cheminformatics and machine-learning software
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.  Features Include:
  .
   * Chemical reaction handling and transforms
   * Substructure searching with SMARTS
   * Canonical SMILES
   * Molecule-molecule alignment
   * Large number of molecular descriptors, including topological,
     compositional, EState, SlogP/SMR, VSA and Feature-map vectors
   * Fragmentation using RECAP rules
   * 2D coordinate generation and depiction, including constrained depiction
   * 3D coordinate generation using geometry embedding
   * UFF and MMFF94 forcefields
   * Chirality support, including calculation of (R/S) stereochemistry codes
   * 2D pharmacophore searching
   * Fingerprinting, including Daylight-like, atom pairs, topological
     torsions, Morgan algorithm and MACCS keys
   * Calculation of shape similarity
   * Multi-molecule maximum common substructure
   * Machine-learning via clustering and information theory algorithms
   * Gasteiger-Marsili partial charge calculation
  .
  File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit
  binary format.
 Python-Version: 2.7

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-rw-r--r-- root/root         0 2018-10-22 02:29 ./usr/lib/python2.7/dist-packages/rdkit/Avalon/__init__.py
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-rw-r--r-- root/root       967 2018-10-22 02:29 ./usr/lib/python2.7/dist-packages/rdkit/sping/tests/testallps.py
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/lib/python2.7/dist-packages/rdkit/sping/util/
-rw-r--r-- root/root     12634 2018-10-22 02:29 ./usr/lib/python2.7/dist-packages/rdkit/sping/util/HTMLPiddler.py
-rw-r--r-- root/root        16 2018-10-22 02:29 ./usr/lib/python2.7/dist-packages/rdkit/sping/util/__init__.py
-rw-r--r-- root/root       390 2018-10-22 02:29 ./usr/lib/python2.7/dist-packages/rdkit/sping/utils.py
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/lib/python2.7/dist-packages/rdkit/utils/
-rw-r--r-- root/root      2770 2018-10-22 02:29 ./usr/lib/python2.7/dist-packages/rdkit/utils/12h.gif
-rw-r--r-- root/root         0 2018-10-22 02:29 ./usr/lib/python2.7/dist-packages/rdkit/utils/__init__.py
-rw-r--r-- root/root      1740 2018-10-22 02:29 ./usr/lib/python2.7/dist-packages/rdkit/utils/cactvs.py
-rw-r--r-- root/root     11837 2018-10-22 02:29 ./usr/lib/python2.7/dist-packages/rdkit/utils/chemdraw.py
-rw-r--r-- root/root      2477 2018-10-22 02:29 ./usr/lib/python2.7/dist-packages/rdkit/utils/chemdraw_qax.py
-rw-r--r-- root/root      4651 2018-10-22 02:29 ./usr/lib/python2.7/dist-packages/rdkit/utils/chemutils.py
-rw-r--r-- root/root      2199 2018-10-22 02:29 ./usr/lib/python2.7/dist-packages/rdkit/utils/comhack.py
-rw-r--r-- root/root      1003 2018-10-22 02:29 ./usr/lib/python2.7/dist-packages/rdkit/utils/fileutils.py
-rw-r--r-- root/root      1189 2018-10-22 02:29 ./usr/lib/python2.7/dist-packages/rdkit/utils/listutils.py
-rw-r--r-- root/root       113 2018-10-22 02:29 ./usr/lib/python2.7/dist-packages/rdkit/utils/retest.txt
-rw-r--r-- root/root      1872 2018-10-22 02:29 ./usr/lib/python2.7/dist-packages/rdkit/utils/spiral.py
-rw-r--r-- root/root     16086 2018-10-22 02:29 ./usr/lib/python2.7/dist-packages/rdkit/utils/test1.gif
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-rw-r--r-- root/root      6682 2018-10-22 02:29 ./usr/lib/python2.7/dist-packages/rdkit/utils/test3.gif
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/share/
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/share/doc/
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/share/doc/python-rdkit/
-rw-r--r-- root/root       225 2019-01-08 20:22 ./usr/share/doc/python-rdkit/TODO.Debian
-rw-r--r-- root/root      3839 2019-01-31 13:20 ./usr/share/doc/python-rdkit/changelog.Debian.gz
-rw-r--r-- root/root     57914 2018-10-22 02:29 ./usr/share/doc/python-rdkit/changelog.gz
-rw-r--r-- root/root      6729 2019-01-08 20:22 ./usr/share/doc/python-rdkit/copyright
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/share/pyshared/
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/share/pyshared/rdkit/
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/share/pyshared/rdkit/Chem/
drwxr-xr-x root/root         0 2019-01-31 13:20 ./usr/share/pyshared/rdkit/Chem/Draw/
lrwxrwxrwx root/root         0 2019-01-31 13:20 ./usr/share/pyshared/rdkit/Chem/Draw/FreeSans.ttf -> ../../../../fonts/truetype/freefont/FreeSans.ttf


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| Post Build                                                                   |
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| Cleanup                                                                      |
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Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

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| Summary                                                                      |
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Build Architecture: armhf
Build-Space: 2699216
Build-Time: 14344
Distribution: buster-staging
Host Architecture: armhf
Install-Time: 2804
Job: rdkit_201809.1+dfsg-6
Machine Architecture: armhf
Package: rdkit
Package-Time: 17244
Source-Version: 201809.1+dfsg-6
Space: 2699216
Status: successful
Version: 201809.1+dfsg-6
--------------------------------------------------------------------------------
Finished at 2019-02-04T12:25:44Z
Build needed 04:47:24, 2699216k disc space
Raspbian Package Auto-Building

Build log for rdkit (201809.1+dfsg-6) on armhf
