Build log for rdkit (201809.1+dfsg-3) on armhf

rdkit → 201809.1+dfsg-3 → armhf → 2019-01-14 09:08:10

sbuild (Debian sbuild) 0.72.0 (25 Oct 2016) on mb-lxc-01

+==============================================================================+
| rdkit 201809.1+dfsg-3 (armhf)                Mon, 14 Jan 2019 07:32:14 +0000 |
+==============================================================================+

Package: rdkit
Version: 201809.1+dfsg-3
Source Version: 201809.1+dfsg-3
Distribution: buster-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf

I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/buster-staging-armhf-sbuild-f47d97f2-0e24-4798-8fe3-eaed89a9dd91' with '<<CHROOT>>'

+------------------------------------------------------------------------------+
| Update chroot                                                                |
+------------------------------------------------------------------------------+

Get:1 http://172.17.0.1/private buster-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private buster-staging/main Sources [11.4 MB]
Get:3 http://172.17.0.1/private buster-staging/main armhf Packages [13.1 MB]
Fetched 24.5 MB in 9s (2693 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Fetch source files                                                           |
+------------------------------------------------------------------------------+


Check APT
---------

Checking available source versions...

Download source files with APT
------------------------------

Reading package lists...
NOTICE: 'rdkit' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/debichem-team/rdkit.git
Please use:
git clone https://salsa.debian.org/debichem-team/rdkit.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 47.8 MB of source archives.
Get:1 http://172.17.0.1/private buster-staging/main rdkit 201809.1+dfsg-3 (dsc) [2732 B]
Get:2 http://172.17.0.1/private buster-staging/main rdkit 201809.1+dfsg-3 (tar) [47.8 MB]
Get:3 http://172.17.0.1/private buster-staging/main rdkit 201809.1+dfsg-3 (diff) [91.4 kB]
Fetched 47.8 MB in 7s (7322 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/rdkit-EKcuLr/rdkit-201809.1+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/rdkit-EKcuLr' with '<<BUILDDIR>>'

+------------------------------------------------------------------------------+
| Install build-essential                                                      |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-ySSkvx/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-ySSkvx/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-ySSkvx/gpg/trustdb.gpg: trustdb created
gpg: key 37145E60F90AF620: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg:               imported: 1
gpg: key 37145E60F90AF620: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 37145E60F90AF620: secret key imported
gpg: Total number processed: 1
gpg:              unchanged: 1
gpg:       secret keys read: 1
gpg:   secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-ySSkvx/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-ySSkvx/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-ySSkvx/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-ySSkvx/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-ySSkvx/apt_archive ./ Packages [432 B]
Fetched 2108 B in 0s (11.0 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install core build dependencies (apt-based resolver)
----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  ca-certificates dbus dbus-user-session e2fsprogs-l10n krb5-locales libexpat1
  libgpg-error-l10n libnss-systemd libpam-systemd libssl1.1 openssl
  systemd-sysv
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
  sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 1 not upgraded.
Need to get 852 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-ySSkvx/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [852 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 852 B in 0s (0 B/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 15814 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Check architectures                                                          |
+------------------------------------------------------------------------------+

Arch check ok (armhf included in any all)

+------------------------------------------------------------------------------+
| Install package build dependencies                                           |
+------------------------------------------------------------------------------+


Setup apt archive
-----------------

Merged Build-Depends: bison, cmake, debhelper (>> 9), dh-python, doxygen, flex, imagemagick, latexmk, libboost-dev, libboost-python-dev, libboost-regex-dev, libboost-system-dev, libboost-thread-dev, librsvg2-bin, libsqlite3-dev, pandoc, postgresql-server-dev-all, python-dev, python-pil, python-numpy, python-pandas, python3-sphinx, python3-recommonmark, rapidjson-dev, texlive-fonts-recommended, texlive-generic-extra, texlive-latex-base, texlive-latex-extra, texlive-latex-recommended
Filtered Build-Depends: bison, cmake, debhelper (>> 9), dh-python, doxygen, flex, imagemagick, latexmk, libboost-dev, libboost-python-dev, libboost-regex-dev, libboost-system-dev, libboost-thread-dev, librsvg2-bin, libsqlite3-dev, pandoc, postgresql-server-dev-all, python-dev, python-pil, python-numpy, python-pandas, python3-sphinx, python3-recommonmark, rapidjson-dev, texlive-fonts-recommended, texlive-generic-extra, texlive-latex-base, texlive-latex-extra, texlive-latex-recommended
dpkg-deb: building package 'sbuild-build-depends-rdkit-dummy' in '/<<BUILDDIR>>/resolver-ySSkvx/apt_archive/sbuild-build-depends-rdkit-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning:   sbuild-build-depends-core-dummy sbuild-build-depends-rdkit-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-ySSkvx/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-ySSkvx/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-ySSkvx/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-ySSkvx/apt_archive ./ Sources [679 B]
Get:5 copy:/<<BUILDDIR>>/resolver-ySSkvx/apt_archive ./ Packages [758 B]
Fetched 2770 B in 0s (14.1 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...

Install rdkit build dependencies (apt-based resolver)
-----------------------------------------------------

Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
  e2fsprogs-l10n krb5-locales libgpg-error-l10n libnss-systemd
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
  adwaita-icon-theme autoconf automake autopoint autotools-dev binfmt-support
  bison bsdmainutils clang-7 cmake cmake-data dconf-gsettings-backend
  dconf-service dctrl-tools debhelper dh-autoreconf dh-python
  dh-strip-nondeterminism distro-info-data docutils-common doxygen dwz file
  flex fontconfig fontconfig-config fonts-dejavu-core fonts-lmodern gettext
  gettext-base glib-networking glib-networking-common glib-networking-services
  groff-base gsettings-desktop-schemas gtk-update-icon-cache
  hicolor-icon-theme icu-devtools imagemagick imagemagick-6-common
  imagemagick-6.q16 intltool-debian latexmk libarchive-zip-perl libarchive13
  libatk-bridge2.0-0 libatk1.0-0 libatk1.0-data libatspi2.0-0 libavahi-client3
  libavahi-common-data libavahi-common3 libbison-dev libblas3
  libboost-atomic1.67-dev libboost-atomic1.67.0 libboost-chrono1.67-dev
  libboost-chrono1.67.0 libboost-date-time1.67-dev libboost-date-time1.67.0
  libboost-dev libboost-python-dev libboost-python1.67-dev
  libboost-python1.67.0 libboost-regex-dev libboost-regex1.67-dev
  libboost-regex1.67.0 libboost-serialization1.67-dev
  libboost-serialization1.67.0 libboost-system-dev libboost-system1.67-dev
  libboost-system1.67.0 libboost-thread-dev libboost-thread1.67-dev
  libboost-thread1.67.0 libboost1.67-dev libbrotli1 libbsd0 libcairo-gobject2
  libcairo2 libclang-common-7-dev libclang1-6.0 libclang1-7 libcolord2
  libcroco3 libcups2 libcupsimage2 libcurl4 libdatrie1 libdconf1 libde265-0
  libedit2 libelf1 libepoxy0 libexpat1-dev libffi-dev libfftw3-double3
  libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libfribidi0
  libgc1c2 libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgfortran5
  libglib2.0-0 libgraphite2-3 libgs9 libgs9-common libgtk-3-0 libgtk-3-common
  libharfbuzz-icu0 libharfbuzz0b libheif1 libice6 libicu-dev libicu63
  libijs-0.35 libjbig0 libjbig2dec0 libjpeg62-turbo libjs-jquery
  libjs-sphinxdoc libjs-underscore libjson-glib-1.0-0 libjson-glib-1.0-common
  libjsoncpp1 libkpathsea6 liblapack3 liblcms2-2 libllvm6.0 libllvm7
  liblqr-1-0 libltdl7 liblua5.1-0 libmagic-mgc libmagic1 libmagickcore-6.q16-6
  libmagickwand-6.q16-6 libmpdec2 libncurses-dev libnghttp2-14 libobjc-8-dev
  libobjc4 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
  libpaper-utils libpaper1 libpipeline1 libpixman-1-0 libpotrace0 libpq-dev
  libpq5 libproxy1v5 libpsl5 libptexenc1 libpython-dev libpython-stdlib
  libpython2-dev libpython2-stdlib libpython2.7 libpython2.7-dev
  libpython2.7-minimal libpython2.7-stdlib libpython3-dev libpython3-stdlib
  libpython3.7 libpython3.7-dev libpython3.7-minimal libpython3.7-stdlib
  librest-0.7-0 librhash0 librsvg2-2 librsvg2-bin librsvg2-common librtmp1
  libsigsegv2 libsm6 libsoup-gnome2.4-1 libsoup2.4-1 libsqlite3-dev libssh2-1
  libsynctex2 libteckit0 libtexlua52 libtexlua53 libtexluajit2 libthai-data
  libthai0 libtiff5 libtinfo-dev libtool libuchardet0 libuv1
  libwayland-client0 libwayland-cursor0 libwayland-egl1 libwebp6 libwebpdemux2
  libwebpmux3 libwoff1 libx11-6 libx11-data libx265-165 libxapian30 libxau6
  libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxcomposite1 libxcursor1
  libxdamage1 libxdmcp6 libxext6 libxfixes3 libxi6 libxinerama1 libxkbcommon0
  libxml2 libxmu6 libxpm4 libxrandr2 libxrender1 libxt6 libxxhash0 libyaml-0-2
  libzzip-0-13 llvm-7 llvm-7-dev llvm-7-runtime lsb-release m4 man-db
  mime-support pandoc pandoc-data po-debconf poppler-data
  postgresql-client-common postgresql-common postgresql-server-dev-11
  postgresql-server-dev-all preview-latex-style python python-babel-localedata
  python-dateutil python-dev python-minimal python-numpy python-pandas
  python-pandas-lib python-pil python-pkg-resources python-six python-tz
  python2 python2-dev python2-minimal python2.7 python2.7-dev
  python2.7-minimal python3 python3-alabaster python3-babel python3-certifi
  python3-chardet python3-commonmark-bkrs python3-dev python3-distutils
  python3-docutils python3-idna python3-imagesize python3-jinja2
  python3-lib2to3 python3-markupsafe python3-minimal python3-packaging
  python3-pkg-resources python3-pygments python3-pyparsing
  python3-recommonmark python3-requests python3-roman python3-six
  python3-sphinx python3-tz python3-urllib3 python3.7 python3.7-dev
  python3.7-minimal rapidjson-dev sgml-base shared-mime-info sphinx-common
  ssl-cert t1utils tex-common texlive-base texlive-binaries
  texlive-fonts-recommended texlive-generic-extra texlive-latex-base
  texlive-latex-extra texlive-latex-recommended texlive-pictures
  texlive-plain-generic ucf x11-common xdg-utils xkb-data xml-core
Suggested packages:
  autoconf-archive gnu-standards autoconf-doc bison-doc wamerican | wordlist
  whois vacation clang-7-doc cmake-doc ninja-build debtags dh-make
  doxygen-latex doxygen-doc doxygen-gui graphviz flex-doc gettext-doc
  libasprintf-dev libgettextpo-dev groff imagemagick-doc autotrace cups-bsd
  | lpr | lprng curl enscript ffmpeg gimp gnuplot grads hp2xx html2ps
  libwmf-bin mplayer povray radiance sane-utils transfig ufraw-batch
  ghostscript lrzip libboost-doc libboost1.67-doc gccxml
  libboost-container1.67-dev libboost-context1.67-dev
  libboost-coroutine1.67-dev libboost-exception1.67-dev libboost-fiber1.67-dev
  libboost-filesystem1.67-dev libboost-graph1.67-dev
  libboost-graph-parallel1.67-dev libboost-iostreams1.67-dev
  libboost-locale1.67-dev libboost-log1.67-dev libboost-math1.67-dev
  libboost-mpi1.67-dev libboost-mpi-python1.67-dev libboost-numpy1.67-dev
  libboost-program-options1.67-dev libboost-random1.67-dev
  libboost-signals1.67-dev libboost-stacktrace1.67-dev libboost-test1.67-dev
  libboost-timer1.67-dev libboost-type-erasure1.67-dev libboost-wave1.67-dev
  libboost1.67-tools-dev libmpfrc++-dev libntl-dev colord cups-common
  libfftw3-bin libfftw3-dev gvfs icu-doc liblcms2-utils
  libmagickcore-6.q16-6-extra ncurses-doc postgresql-doc-11 sqlite3-doc
  libtool-doc gfortran | fortran95-compiler gcj-jdk xapian-tools llvm-7-doc
  lsb m4-doc apparmor less www-browser texlive-xetex texlive-luatex
  pandoc-citeproc context wkhtmltopdf ghc nodejs php ruby r-base-core
  libjs-mathjax node-katex libmail-box-perl poppler-utils
  fonts-japanese-mincho | fonts-ipafont-mincho fonts-japanese-gothic
  | fonts-ipafont-gothic fonts-arphic-ukai fonts-arphic-uming fonts-nanum
  libjson-perl python-doc python-tk gfortran python-pytest python-numpy-dbg
  python-numpy-doc python-pandas-doc python-pil-doc python-pil-dbg
  python-setuptools python2-doc python2.7-doc python3-doc python3-tk
  python3-venv python-commonmark-bkrs-doc docutils-doc fonts-linuxlibertine
  | ttf-linux-libertine texlive-lang-french python-jinja2-doc
  python3-setuptools python-pygments-doc ttf-bitstream-vera
  python-pyparsing-doc python3-cryptography python3-openssl python3-socks
  dvipng python3-sphinx-rtd-theme python3-stemmer sphinx-doc python3.7-venv
  python3.7-doc sgml-base-doc openssl-blacklist gv | postscript-viewer perl-tk
  xpdf-reader | pdf-viewer texlive-fonts-recommended-doc
  texlive-latex-base-doc python-pygments icc-profiles libfile-which-perl
  libspreadsheet-parseexcel-perl texlive-latex-extra-doc
  texlive-latex-recommended-doc texlive-pstricks dot2tex prerex ruby-tcltk
  | libtcltk-ruby texlive-pictures-doc vprerex
Recommended packages:
  libomp-7-dev libfl-dev curl | wget | lynx libmagickcore-6.q16-6-extra
  ghostscript netpbm xpdf-reader | pdf-viewer gv | postscript-viewer
  at-spi2-core libcupsfilters1 libarchive-cpio-perl libgdk-pixbuf2.0-bin
  libglib2.0-data xdg-user-dirs fonts-droid-fallback libgtk-3-bin
  javascript-common gsfonts publicsuffix libltdl-dev libmail-sendmail-perl
  logrotate python-scipy python-matplotlib python-tables python-numexpr
  python-xlrd python-statsmodels python-openpyxl python-xlwt python-bs4
  python-html5lib python-lxml python-olefile python3-pil lmodern tex-gyre tipa
  ruby | ruby-interpreter tk libfile-mimeinfo-perl libnet-dbus-perl
  libx11-protocol-perl x11-utils x11-xserver-utils
The following NEW packages will be installed:
  adwaita-icon-theme autoconf automake autopoint autotools-dev binfmt-support
  bison bsdmainutils clang-7 cmake cmake-data dconf-gsettings-backend
  dconf-service dctrl-tools debhelper dh-autoreconf dh-python
  dh-strip-nondeterminism distro-info-data docutils-common doxygen dwz file
  flex fontconfig fontconfig-config fonts-dejavu-core fonts-lmodern gettext
  gettext-base glib-networking glib-networking-common glib-networking-services
  groff-base gsettings-desktop-schemas gtk-update-icon-cache
  hicolor-icon-theme icu-devtools imagemagick imagemagick-6-common
  imagemagick-6.q16 intltool-debian latexmk libarchive-zip-perl libarchive13
  libatk-bridge2.0-0 libatk1.0-0 libatk1.0-data libatspi2.0-0 libavahi-client3
  libavahi-common-data libavahi-common3 libbison-dev libblas3
  libboost-atomic1.67-dev libboost-atomic1.67.0 libboost-chrono1.67-dev
  libboost-chrono1.67.0 libboost-date-time1.67-dev libboost-date-time1.67.0
  libboost-dev libboost-python-dev libboost-python1.67-dev
  libboost-python1.67.0 libboost-regex-dev libboost-regex1.67-dev
  libboost-regex1.67.0 libboost-serialization1.67-dev
  libboost-serialization1.67.0 libboost-system-dev libboost-system1.67-dev
  libboost-system1.67.0 libboost-thread-dev libboost-thread1.67-dev
  libboost-thread1.67.0 libboost1.67-dev libbrotli1 libbsd0 libcairo-gobject2
  libcairo2 libclang-common-7-dev libclang1-6.0 libclang1-7 libcolord2
  libcroco3 libcups2 libcupsimage2 libcurl4 libdatrie1 libdconf1 libde265-0
  libedit2 libelf1 libepoxy0 libexpat1-dev libffi-dev libfftw3-double3
  libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libfribidi0
  libgc1c2 libgdk-pixbuf2.0-0 libgdk-pixbuf2.0-common libgfortran5
  libglib2.0-0 libgraphite2-3 libgs9 libgs9-common libgtk-3-0 libgtk-3-common
  libharfbuzz-icu0 libharfbuzz0b libheif1 libice6 libicu-dev libicu63
  libijs-0.35 libjbig0 libjbig2dec0 libjpeg62-turbo libjs-jquery
  libjs-sphinxdoc libjs-underscore libjson-glib-1.0-0 libjson-glib-1.0-common
  libjsoncpp1 libkpathsea6 liblapack3 liblcms2-2 libllvm6.0 libllvm7
  liblqr-1-0 libltdl7 liblua5.1-0 libmagic-mgc libmagic1 libmagickcore-6.q16-6
  libmagickwand-6.q16-6 libmpdec2 libncurses-dev libnghttp2-14 libobjc-8-dev
  libobjc4 libopenjp2-7 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0
  libpaper-utils libpaper1 libpipeline1 libpixman-1-0 libpotrace0 libpq-dev
  libpq5 libproxy1v5 libpsl5 libptexenc1 libpython-dev libpython-stdlib
  libpython2-dev libpython2-stdlib libpython2.7 libpython2.7-dev
  libpython2.7-minimal libpython2.7-stdlib libpython3-dev libpython3-stdlib
  libpython3.7 libpython3.7-dev libpython3.7-minimal libpython3.7-stdlib
  librest-0.7-0 librhash0 librsvg2-2 librsvg2-bin librsvg2-common librtmp1
  libsigsegv2 libsm6 libsoup-gnome2.4-1 libsoup2.4-1 libsqlite3-dev libssh2-1
  libsynctex2 libteckit0 libtexlua52 libtexlua53 libtexluajit2 libthai-data
  libthai0 libtiff5 libtinfo-dev libtool libuchardet0 libuv1
  libwayland-client0 libwayland-cursor0 libwayland-egl1 libwebp6 libwebpdemux2
  libwebpmux3 libwoff1 libx11-6 libx11-data libx265-165 libxapian30 libxau6
  libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxcomposite1 libxcursor1
  libxdamage1 libxdmcp6 libxext6 libxfixes3 libxi6 libxinerama1 libxkbcommon0
  libxml2 libxmu6 libxpm4 libxrandr2 libxrender1 libxt6 libxxhash0 libyaml-0-2
  libzzip-0-13 llvm-7 llvm-7-dev llvm-7-runtime lsb-release m4 man-db
  mime-support pandoc pandoc-data po-debconf poppler-data
  postgresql-client-common postgresql-common postgresql-server-dev-11
  postgresql-server-dev-all preview-latex-style python python-babel-localedata
  python-dateutil python-dev python-minimal python-numpy python-pandas
  python-pandas-lib python-pil python-pkg-resources python-six python-tz
  python2 python2-dev python2-minimal python2.7 python2.7-dev
  python2.7-minimal python3 python3-alabaster python3-babel python3-certifi
  python3-chardet python3-commonmark-bkrs python3-dev python3-distutils
  python3-docutils python3-idna python3-imagesize python3-jinja2
  python3-lib2to3 python3-markupsafe python3-minimal python3-packaging
  python3-pkg-resources python3-pygments python3-pyparsing
  python3-recommonmark python3-requests python3-roman python3-six
  python3-sphinx python3-tz python3-urllib3 python3.7 python3.7-dev
  python3.7-minimal rapidjson-dev sbuild-build-depends-rdkit-dummy sgml-base
  shared-mime-info sphinx-common ssl-cert t1utils tex-common texlive-base
  texlive-binaries texlive-fonts-recommended texlive-generic-extra
  texlive-latex-base texlive-latex-extra texlive-latex-recommended
  texlive-pictures texlive-plain-generic ucf x11-common xdg-utils xkb-data
  xml-core
0 upgraded, 315 newly installed, 0 to remove and 1 not upgraded.
Need to get 385 MB/387 MB of archives.
After this operation, 1549 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-ySSkvx/apt_archive ./ sbuild-build-depends-rdkit-dummy 0.invalid.0 [1052 B]
Get:2 http://172.17.0.1/private buster-staging/main armhf libbsd0 armhf 0.9.1-1 [104 kB]
Get:3 http://172.17.0.1/private buster-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:4 http://172.17.0.1/private buster-staging/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB]
Get:5 http://172.17.0.1/private buster-staging/main armhf groff-base armhf 1.22.4-2 [782 kB]
Get:6 http://172.17.0.1/private buster-staging/main armhf libpipeline1 armhf 1.5.0-2 [25.1 kB]
Get:7 http://172.17.0.1/private buster-staging/main armhf man-db armhf 2.8.5-1 [1231 kB]
Get:8 http://172.17.0.1/private buster-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:9 http://172.17.0.1/private buster-staging/main armhf m4 armhf 1.4.18-2 [185 kB]
Get:10 http://172.17.0.1/private buster-staging/main armhf flex armhf 2.6.4-6.2 [427 kB]
Get:11 http://172.17.0.1/private buster-staging/main armhf libfftw3-double3 armhf 3.3.8-2 [429 kB]
Get:12 http://172.17.0.1/private buster-staging/main armhf libfreetype6 armhf 2.9.1-3 [318 kB]
Get:13 http://172.17.0.1/private buster-staging/main armhf ucf all 3.0038+nmu1 [69.0 kB]
Get:14 http://172.17.0.1/private buster-staging/main armhf fontconfig-config all 2.13.1-2 [280 kB]
Get:15 http://172.17.0.1/private buster-staging/main armhf libfontconfig1 armhf 2.13.1-2 [327 kB]
Get:16 http://172.17.0.1/private buster-staging/main armhf libde265-0 armhf 1.0.3-1+rpi1+b9 [180 kB]
Get:17 http://172.17.0.1/private buster-staging/main armhf libx265-165 armhf 2.9-3 [518 kB]
Get:18 http://172.17.0.1/private buster-staging/main armhf libheif1 armhf 1.3.2-1+b1 [106 kB]
Get:19 http://172.17.0.1/private buster-staging/main armhf liblcms2-2 armhf 2.9-3 [116 kB]
Get:20 http://172.17.0.1/private buster-staging/main armhf libglib2.0-0 armhf 2.58.2-3 [1076 kB]
Get:21 http://172.17.0.1/private buster-staging/main armhf liblqr-1-0 armhf 0.4.2-2.1 [23.1 kB]
Get:22 http://172.17.0.1/private buster-staging/main armhf libltdl7 armhf 2.4.6-6 [387 kB]
Get:23 http://172.17.0.1/private buster-staging/main armhf libopenjp2-7 armhf 2.3.0-1.1 [137 kB]
Get:24 http://172.17.0.1/private buster-staging/main armhf libtiff5 armhf 4.0.10-3 [235 kB]
Get:25 http://172.17.0.1/private buster-staging/main armhf libxcb1 armhf 1.13.1-2 [132 kB]
Get:26 http://172.17.0.1/private buster-staging/main armhf libx11-data all 2:1.6.7-1 [298 kB]
Get:27 http://172.17.0.1/private buster-staging/main armhf libx11-6 armhf 2:1.6.7-1 [689 kB]
Get:28 http://172.17.0.1/private buster-staging/main armhf libicu63 armhf 63.1-5 [7976 kB]
Get:29 http://172.17.0.1/private buster-staging/main armhf libxml2 armhf 2.9.4+dfsg1-7+b1 [570 kB]
Get:30 http://172.17.0.1/private buster-staging/main armhf imagemagick-6-common all 8:6.9.10.23+dfsg-2 [200 kB]
Get:31 http://172.17.0.1/private buster-staging/main armhf libmagickcore-6.q16-6 armhf 8:6.9.10.23+dfsg-2 [1598 kB]
Get:32 http://172.17.0.1/private buster-staging/main armhf libmagickwand-6.q16-6 armhf 8:6.9.10.23+dfsg-2 [423 kB]
Get:33 http://172.17.0.1/private buster-staging/main armhf poppler-data all 0.4.9-2 [1473 kB]
Get:34 http://172.17.0.1/private buster-staging/main armhf libpython2.7-minimal armhf 2.7.15-5 [394 kB]
Get:35 http://172.17.0.1/private buster-staging/main armhf python2.7-minimal armhf 2.7.15-5 [1089 kB]
Get:36 http://172.17.0.1/private buster-staging/main armhf python2-minimal armhf 2.7.15-3 [41.3 kB]
Get:37 http://172.17.0.1/private buster-staging/main armhf python-minimal armhf 2.7.15-3 [20.9 kB]
Get:38 http://172.17.0.1/private buster-staging/main armhf mime-support all 3.61 [37.1 kB]
Get:39 http://172.17.0.1/private buster-staging/main armhf libpython2.7-stdlib armhf 2.7.15-5 [1844 kB]
Get:40 http://172.17.0.1/private buster-staging/main armhf python2.7 armhf 2.7.15-5 [299 kB]
Get:41 http://172.17.0.1/private buster-staging/main armhf libpython2-stdlib armhf 2.7.15-3 [20.7 kB]
Get:42 http://172.17.0.1/private buster-staging/main armhf libpython-stdlib armhf 2.7.15-3 [20.7 kB]
Get:43 http://172.17.0.1/private buster-staging/main armhf python2 armhf 2.7.15-3 [41.5 kB]
Get:44 http://172.17.0.1/private buster-staging/main armhf python armhf 2.7.15-3 [22.7 kB]
Get:45 http://172.17.0.1/private buster-staging/main armhf libpython3.7-minimal armhf 3.7.2-1 [582 kB]
Get:46 http://172.17.0.1/private buster-staging/main armhf python3.7-minimal armhf 3.7.2-1 [1454 kB]
Get:47 http://172.17.0.1/private buster-staging/main armhf python3-minimal armhf 3.7.1-3 [36.5 kB]
Get:48 http://172.17.0.1/private buster-staging/main armhf libmpdec2 armhf 2.4.2-2 [67.2 kB]
Get:49 http://172.17.0.1/private buster-staging/main armhf libpython3.7-stdlib armhf 3.7.2-1 [1663 kB]
Get:50 http://172.17.0.1/private buster-staging/main armhf python3.7 armhf 3.7.2-1 [323 kB]
Get:51 http://172.17.0.1/private buster-staging/main armhf libpython3-stdlib armhf 3.7.1-3 [20.0 kB]
Get:52 http://172.17.0.1/private buster-staging/main armhf python3 armhf 3.7.1-3 [61.5 kB]
Get:53 http://172.17.0.1/private buster-staging/main armhf sgml-base all 1.29 [14.8 kB]
Get:54 http://172.17.0.1/private buster-staging/main armhf tex-common all 6.10 [53.0 kB]
Get:55 http://172.17.0.1/private buster-staging/main armhf libmagic-mgc armhf 1:5.34-2 [239 kB]
Get:56 http://172.17.0.1/private buster-staging/main armhf libmagic1 armhf 1:5.34-2 [107 kB]
Get:57 http://172.17.0.1/private buster-staging/main armhf file armhf 1:5.34-2 [65.0 kB]
Get:58 http://172.17.0.1/private buster-staging/main armhf gettext-base armhf 0.19.8.1-9 [117 kB]
Get:59 http://172.17.0.1/private buster-staging/main armhf libgc1c2 armhf 1:7.6.4-0.4 [212 kB]
Get:60 http://172.17.0.1/private buster-staging/main armhf hicolor-icon-theme all 0.17-2 [11.4 kB]
Get:61 http://172.17.0.1/private buster-staging/main armhf shared-mime-info armhf 1.10-1 [762 kB]
Get:62 http://172.17.0.1/private buster-staging/main armhf libgdk-pixbuf2.0-common all 2.38.0+dfsg-7 [315 kB]
Get:63 http://172.17.0.1/private buster-staging/main armhf libgdk-pixbuf2.0-0 armhf 2.38.0+dfsg-7 [158 kB]
Get:64 http://172.17.0.1/private buster-staging/main armhf gtk-update-icon-cache armhf 3.24.2-3 [80.3 kB]
Get:65 http://172.17.0.1/private buster-staging/main armhf libpixman-1-0 armhf 0.36.0-1 [458 kB]
Get:66 http://172.17.0.1/private buster-staging/main armhf libxcb-render0 armhf 1.13.1-2 [108 kB]
Get:67 http://172.17.0.1/private buster-staging/main armhf libxcb-shm0 armhf 1.13.1-2 [99.3 kB]
Get:68 http://172.17.0.1/private buster-staging/main armhf libcairo2 armhf 1.16.0-2 [602 kB]
Get:69 http://172.17.0.1/private buster-staging/main armhf libcroco3 armhf 0.6.12-3 [132 kB]
Get:70 http://172.17.0.1/private buster-staging/main armhf fontconfig armhf 2.13.1-2 [404 kB]
Get:71 http://172.17.0.1/private buster-staging/main armhf libfribidi0 armhf 1.0.5-3 [61.9 kB]
Get:72 http://172.17.0.1/private buster-staging/main armhf libthai-data all 0.1.28-1 [170 kB]
Get:73 http://172.17.0.1/private buster-staging/main armhf libdatrie1 armhf 0.2.12-1 [35.8 kB]
Get:74 http://172.17.0.1/private buster-staging/main armhf libthai0 armhf 0.1.28-1 [50.9 kB]
Get:75 http://172.17.0.1/private buster-staging/main armhf libpango-1.0-0 armhf 1.42.4-6 [168 kB]
Get:76 http://172.17.0.1/private buster-staging/main armhf libgraphite2-3 armhf 1.3.12-1 [69.1 kB]
Get:77 http://172.17.0.1/private buster-staging/main armhf libharfbuzz0b armhf 2.3.0-1 [1130 kB]
Get:78 http://172.17.0.1/private buster-staging/main armhf libpangoft2-1.0-0 armhf 1.42.4-6 [61.9 kB]
Get:79 http://172.17.0.1/private buster-staging/main armhf libpangocairo-1.0-0 armhf 1.42.4-6 [51.6 kB]
Get:80 http://172.17.0.1/private buster-staging/main armhf librsvg2-2 armhf 2.44.10-1+rpi1 [958 kB]
Get:81 http://172.17.0.1/private buster-staging/main armhf librsvg2-common armhf 2.44.10-1+rpi1 [22.8 kB]
Get:82 http://172.17.0.1/private buster-staging/main armhf adwaita-icon-theme all 3.30.1-1 [11.7 MB]
Get:83 http://172.17.0.1/private buster-staging/main armhf autoconf all 2.69-11 [341 kB]
Get:84 http://172.17.0.1/private buster-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:85 http://172.17.0.1/private buster-staging/main armhf automake all 1:1.16.1-4 [771 kB]
Get:86 http://172.17.0.1/private buster-staging/main armhf autopoint all 0.19.8.1-9 [434 kB]
Get:87 http://172.17.0.1/private buster-staging/main armhf binfmt-support armhf 2.1.8-2.1 [50.6 kB]
Get:88 http://172.17.0.1/private buster-staging/main armhf libbison-dev armhf 2:3.2.4.dfsg-1 [475 kB]
Get:89 http://172.17.0.1/private buster-staging/main armhf bison armhf 2:3.2.4.dfsg-1 [803 kB]
Get:90 http://172.17.0.1/private buster-staging/main armhf libedit2 armhf 3.1-20181209-1 [78.7 kB]
Get:91 http://172.17.0.1/private buster-staging/main armhf libllvm7 armhf 1:7.0.1-4+rpi1 [11.2 MB]
Get:92 http://172.17.0.1/private buster-staging/main armhf libobjc4 armhf 8.2.0-13+rpi1 [43.0 kB]
Get:93 http://172.17.0.1/private buster-staging/main armhf libobjc-8-dev armhf 8.2.0-13+rpi1 [204 kB]
Get:94 http://172.17.0.1/private buster-staging/main armhf libclang-common-7-dev armhf 1:7.0.1-4+rpi1 [1335 kB]
Get:95 http://172.17.0.1/private buster-staging/main armhf libclang1-7 armhf 1:7.0.1-4+rpi1 [4954 kB]
Get:96 http://172.17.0.1/private buster-staging/main armhf clang-7 armhf 1:7.0.1-4+rpi1 [6663 kB]
Get:97 http://172.17.0.1/private buster-staging/main armhf cmake-data all 3.13.2-1 [1476 kB]
Get:98 http://172.17.0.1/private buster-staging/main armhf libarchive13 armhf 3.3.3-3 [269 kB]
Get:99 http://172.17.0.1/private buster-staging/main armhf libnghttp2-14 armhf 1.35.1-1 [70.8 kB]
Get:100 http://172.17.0.1/private buster-staging/main armhf libpsl5 armhf 0.20.2-2 [52.6 kB]
Get:101 http://172.17.0.1/private buster-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2 [54.0 kB]
Get:102 http://172.17.0.1/private buster-staging/main armhf libssh2-1 armhf 1.8.0-2 [125 kB]
Get:103 http://172.17.0.1/private buster-staging/main armhf libcurl4 armhf 7.62.0-1 [286 kB]
Get:104 http://172.17.0.1/private buster-staging/main armhf librhash0 armhf 1.3.7-1 [113 kB]
Get:105 http://172.17.0.1/private buster-staging/main armhf libuv1 armhf 1.24.0-1 [96.3 kB]
Get:106 http://172.17.0.1/private buster-staging/main armhf cmake armhf 3.13.2-1 [2563 kB]
Get:107 http://172.17.0.1/private buster-staging/main armhf libdconf1 armhf 0.30.1-2 [36.3 kB]
Get:108 http://172.17.0.1/private buster-staging/main armhf dconf-service armhf 0.30.1-2 [33.3 kB]
Get:109 http://172.17.0.1/private buster-staging/main armhf dconf-gsettings-backend armhf 0.30.1-2 [24.7 kB]
Get:110 http://172.17.0.1/private buster-staging/main armhf dctrl-tools armhf 2.24-3 [94.2 kB]
Get:111 http://172.17.0.1/private buster-staging/main armhf libtool all 2.4.6-6 [547 kB]
Get:112 http://172.17.0.1/private buster-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:113 http://172.17.0.1/private buster-staging/main armhf libarchive-zip-perl all 1.64-1 [96.8 kB]
Get:114 http://172.17.0.1/private buster-staging/main armhf libfile-stripnondeterminism-perl all 1.0.0-1 [19.5 kB]
Get:115 http://172.17.0.1/private buster-staging/main armhf dh-strip-nondeterminism all 1.0.0-1 [12.5 kB]
Get:116 http://172.17.0.1/private buster-staging/main armhf libelf1 armhf 0.175-2 [157 kB]
Get:117 http://172.17.0.1/private buster-staging/main armhf dwz armhf 0.12-3 [66.0 kB]
Get:118 http://172.17.0.1/private buster-staging/main armhf gettext armhf 0.19.8.1-9 [1219 kB]
Get:119 http://172.17.0.1/private buster-staging/main armhf intltool-debian all 0.35.0+20060710.4 [26.3 kB]
Get:120 http://172.17.0.1/private buster-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:121 http://172.17.0.1/private buster-staging/main armhf debhelper all 12 [1002 kB]
Get:122 http://172.17.0.1/private buster-staging/main armhf python3-lib2to3 all 3.7.1-1 [78.7 kB]
Get:123 http://172.17.0.1/private buster-staging/main armhf python3-distutils all 3.7.1-1 [144 kB]
Get:124 http://172.17.0.1/private buster-staging/main armhf dh-python all 3.20180927 [95.8 kB]
Get:125 http://172.17.0.1/private buster-staging/main armhf distro-info-data all 0.39 [6272 B]
Get:126 http://172.17.0.1/private buster-staging/main armhf xml-core all 0.18 [23.4 kB]
Get:127 http://172.17.0.1/private buster-staging/main armhf docutils-common all 0.14+dfsg-3 [204 kB]
Get:128 http://172.17.0.1/private buster-staging/main armhf libllvm6.0 armhf 1:6.0.1-9.2+rpi1 [12.5 MB]
Get:129 http://172.17.0.1/private buster-staging/main armhf libclang1-6.0 armhf 1:6.0.1-9.2+rpi1 [5685 kB]
Get:130 http://172.17.0.1/private buster-staging/main armhf libxapian30 armhf 1.4.9-1 [955 kB]
Get:131 http://172.17.0.1/private buster-staging/main armhf doxygen armhf 1.8.13-10 [3257 kB]
Get:132 http://172.17.0.1/private buster-staging/main armhf fonts-lmodern all 2.004.5-5 [4539 kB]
Get:133 http://172.17.0.1/private buster-staging/main armhf libproxy1v5 armhf 0.4.15-5 [49.8 kB]
Get:134 http://172.17.0.1/private buster-staging/main armhf glib-networking-common all 2.58.0-2 [59.3 kB]
Get:135 http://172.17.0.1/private buster-staging/main armhf glib-networking-services armhf 2.58.0-2 [13.0 kB]
Get:136 http://172.17.0.1/private buster-staging/main armhf gsettings-desktop-schemas all 3.28.1-1 [529 kB]
Get:137 http://172.17.0.1/private buster-staging/main armhf glib-networking armhf 2.58.0-2 [47.7 kB]
Get:138 http://172.17.0.1/private buster-staging/main armhf icu-devtools armhf 63.1-5 [166 kB]
Get:139 http://172.17.0.1/private buster-staging/main armhf imagemagick-6.q16 armhf 8:6.9.10.23+dfsg-2 [580 kB]
Get:140 http://172.17.0.1/private buster-staging/main armhf imagemagick armhf 8:6.9.10.23+dfsg-2 [155 kB]
Get:141 http://172.17.0.1/private buster-staging/main armhf libpaper1 armhf 1.1.26 [20.0 kB]
Get:142 http://172.17.0.1/private buster-staging/main armhf libpaper-utils armhf 1.1.26 [17.5 kB]
Get:143 http://172.17.0.1/private buster-staging/main armhf libkpathsea6 armhf 2018.20181218.49446-1 [157 kB]
Get:144 http://172.17.0.1/private buster-staging/main armhf libptexenc1 armhf 2018.20181218.49446-1 [58.2 kB]
Get:145 http://172.17.0.1/private buster-staging/main armhf libsynctex2 armhf 2018.20181218.49446-1 [67.3 kB]
Get:146 http://172.17.0.1/private buster-staging/main armhf libtexlua52 armhf 2018.20181218.49446-1 [86.9 kB]
Get:147 http://172.17.0.1/private buster-staging/main armhf libtexlua53 armhf 2018.20181218.49446-1 [97.9 kB]
Get:148 http://172.17.0.1/private buster-staging/main armhf libtexluajit2 armhf 2018.20181218.49446-1 [204 kB]
Get:149 http://172.17.0.1/private buster-staging/main armhf t1utils armhf 1.41-3 [52.1 kB]
Get:150 http://172.17.0.1/private buster-staging/main armhf libbrotli1 armhf 1.0.7-2 [269 kB]
Get:151 http://172.17.0.1/private buster-staging/main armhf libgs9-common all 9.26~dfsg-2 [5137 kB]
Get:152 http://172.17.0.1/private buster-staging/main armhf libavahi-common-data armhf 0.7-4+b1 [122 kB]
Get:153 http://172.17.0.1/private buster-staging/main armhf libavahi-common3 armhf 0.7-4+b1 [51.1 kB]
Get:154 http://172.17.0.1/private buster-staging/main armhf libavahi-client3 armhf 0.7-4+b1 [54.0 kB]
Get:155 http://172.17.0.1/private buster-staging/main armhf libcups2 armhf 2.2.10-3+b2 [287 kB]
Get:156 http://172.17.0.1/private buster-staging/main armhf libcupsimage2 armhf 2.2.10-3+b2 [130 kB]
Get:157 http://172.17.0.1/private buster-staging/main armhf libijs-0.35 armhf 0.35-13 [16.7 kB]
Get:158 http://172.17.0.1/private buster-staging/main armhf libjbig2dec0 armhf 0.15-2 [53.3 kB]
Get:159 http://172.17.0.1/private buster-staging/main armhf libgs9 armhf 9.26~dfsg-2 [1845 kB]
Get:160 http://172.17.0.1/private buster-staging/main armhf libharfbuzz-icu0 armhf 2.3.0-1 [817 kB]
Get:161 http://172.17.0.1/private buster-staging/main armhf libpotrace0 armhf 1.15-1 [23.9 kB]
Get:162 http://172.17.0.1/private buster-staging/main armhf libteckit0 armhf 2.5.8+ds2-5 [245 kB]
Get:163 http://172.17.0.1/private buster-staging/main armhf libwoff1 armhf 1.0.2-1 [36.1 kB]
Get:164 http://172.17.0.1/private buster-staging/main armhf libxmu6 armhf 2:1.1.2-2 [52.0 kB]
Get:165 http://172.17.0.1/private buster-staging/main armhf libxaw7 armhf 2:1.0.13-1 [164 kB]
Get:166 http://172.17.0.1/private buster-staging/main armhf libxxhash0 armhf 0.6.5-2 [10.0 kB]
Get:167 http://172.17.0.1/private buster-staging/main armhf libzzip-0-13 armhf 0.13.62-3.1 [51.5 kB]
Get:168 http://172.17.0.1/private buster-staging/main armhf texlive-binaries armhf 2018.20181218.49446-1 [7807 kB]
Get:169 http://172.17.0.1/private buster-staging/main armhf xdg-utils all 1.1.3-1 [73.3 kB]
Get:170 http://172.17.0.1/private buster-staging/main armhf texlive-base all 2018.20181214-1 [19.4 MB]
Get:171 http://172.17.0.1/private buster-staging/main armhf texlive-latex-base all 2018.20181214-1 [985 kB]
Get:172 http://172.17.0.1/private buster-staging/main armhf latexmk all 1:4.61-0.1 [390 kB]
Get:173 http://172.17.0.1/private buster-staging/main armhf libatk1.0-data all 2.30.0-2 [145 kB]
Get:174 http://172.17.0.1/private buster-staging/main armhf libatk1.0-0 armhf 2.30.0-2 [42.7 kB]
Get:175 http://172.17.0.1/private buster-staging/main armhf libatspi2.0-0 armhf 2.30.0-5 [54.2 kB]
Get:176 http://172.17.0.1/private buster-staging/main armhf libatk-bridge2.0-0 armhf 2.30.0-2 [50.9 kB]
Get:177 http://172.17.0.1/private buster-staging/main armhf libgfortran5 armhf 8.2.0-13+rpi1 [205 kB]
Get:178 http://172.17.0.1/private buster-staging/main armhf libblas3 armhf 3.8.0-2 [103 kB]
Get:179 http://172.17.0.1/private buster-staging/main armhf libboost1.67-dev armhf 1.67.0-11 [8386 kB]
Get:180 http://172.17.0.1/private buster-staging/main armhf libboost-atomic1.67.0 armhf 1.67.0-11 [226 kB]
Get:181 http://172.17.0.1/private buster-staging/main armhf libboost-atomic1.67-dev armhf 1.67.0-11 [225 kB]
Get:182 http://172.17.0.1/private buster-staging/main armhf libboost-system1.67.0 armhf 1.67.0-11 [228 kB]
Get:183 http://172.17.0.1/private buster-staging/main armhf libboost-chrono1.67.0 armhf 1.67.0-11 [231 kB]
Get:184 http://172.17.0.1/private buster-staging/main armhf libboost-chrono1.67-dev armhf 1.67.0-11 [233 kB]
Get:185 http://172.17.0.1/private buster-staging/main armhf libboost-date-time1.67.0 armhf 1.67.0-11 [236 kB]
Get:186 http://172.17.0.1/private buster-staging/main armhf libboost-serialization1.67.0 armhf 1.67.0-11 [300 kB]
Get:187 http://172.17.0.1/private buster-staging/main armhf libboost-serialization1.67-dev armhf 1.67.0-11 [364 kB]
Get:188 http://172.17.0.1/private buster-staging/main armhf libboost-date-time1.67-dev armhf 1.67.0-11 [247 kB]
Get:189 http://172.17.0.1/private buster-staging/main armhf libboost-dev armhf 1.67.0.1+b1 [4140 B]
Get:190 http://172.17.0.1/private buster-staging/main armhf libboost-python1.67.0 armhf 1.67.0-11 [307 kB]
Get:191 http://172.17.0.1/private buster-staging/main armhf libpython2.7 armhf 2.7.15-5 [871 kB]
Get:192 http://172.17.0.1/private buster-staging/main armhf libexpat1-dev armhf 2.2.6-1 [127 kB]
Get:193 http://172.17.0.1/private buster-staging/main armhf libpython2.7-dev armhf 2.7.15-5 [30.8 MB]
Get:194 http://172.17.0.1/private buster-staging/main armhf libpython2-dev armhf 2.7.15-3 [20.8 kB]
Get:195 http://172.17.0.1/private buster-staging/main armhf libpython-dev armhf 2.7.15-3 [20.8 kB]
Get:196 http://172.17.0.1/private buster-staging/main armhf python2.7-dev armhf 2.7.15-5 [289 kB]
Get:197 http://172.17.0.1/private buster-staging/main armhf python2-dev armhf 2.7.15-3 [1216 B]
Get:198 http://172.17.0.1/private buster-staging/main armhf python-dev armhf 2.7.15-3 [1192 B]
Get:199 http://172.17.0.1/private buster-staging/main armhf libpython3.7 armhf 3.7.2-1 [1253 kB]
Get:200 http://172.17.0.1/private buster-staging/main armhf libpython3.7-dev armhf 3.7.2-1 [47.2 MB]
Get:201 http://172.17.0.1/private buster-staging/main armhf libpython3-dev armhf 3.7.1-3 [20.1 kB]
Get:202 http://172.17.0.1/private buster-staging/main armhf python3.7-dev armhf 3.7.2-1 [510 kB]
Get:203 http://172.17.0.1/private buster-staging/main armhf python3-dev armhf 3.7.1-3 [1264 B]
Get:204 http://172.17.0.1/private buster-staging/main armhf libboost-python1.67-dev armhf 1.67.0-11 [319 kB]
Get:205 http://172.17.0.1/private buster-staging/main armhf libboost-python-dev armhf 1.67.0.1+b1 [4224 B]
Get:206 http://172.17.0.1/private buster-staging/main armhf libboost-regex1.67.0 armhf 1.67.0-11 [429 kB]
Get:207 http://172.17.0.1/private buster-staging/main armhf libicu-dev armhf 63.1-5 [8845 kB]
Get:208 http://172.17.0.1/private buster-staging/main armhf libboost-regex1.67-dev armhf 1.67.0-11 [527 kB]
Get:209 http://172.17.0.1/private buster-staging/main armhf libboost-regex-dev armhf 1.67.0.1+b1 [4192 B]
Get:210 http://172.17.0.1/private buster-staging/main armhf libboost-system1.67-dev armhf 1.67.0-11 [230 kB]
Get:211 http://172.17.0.1/private buster-staging/main armhf libboost-system-dev armhf 1.67.0.1+b1 [4060 B]
Get:212 http://172.17.0.1/private buster-staging/main armhf libboost-thread1.67.0 armhf 1.67.0-11 [260 kB]
Get:213 http://172.17.0.1/private buster-staging/main armhf libboost-thread1.67-dev armhf 1.67.0-11 [267 kB]
Get:214 http://172.17.0.1/private buster-staging/main armhf libboost-thread-dev armhf 1.67.0.1+b1 [3952 B]
Get:215 http://172.17.0.1/private buster-staging/main armhf libcairo-gobject2 armhf 1.16.0-2 [123 kB]
Get:216 http://172.17.0.1/private buster-staging/main armhf libcolord2 armhf 1.4.3-3 [119 kB]
Get:217 http://172.17.0.1/private buster-staging/main armhf libepoxy0 armhf 1.5.3-0.1 [167 kB]
Get:218 http://172.17.0.1/private buster-staging/main armhf libffi-dev armhf 3.2.1-9 [159 kB]
Get:219 http://172.17.0.1/private buster-staging/main armhf libjson-glib-1.0-common all 1.4.4-2 [52.3 kB]
Get:220 http://172.17.0.1/private buster-staging/main armhf libjson-glib-1.0-0 armhf 1.4.4-2 [52.7 kB]
Get:221 http://172.17.0.1/private buster-staging/main armhf libsoup2.4-1 armhf 2.64.2-2 [216 kB]
Get:222 http://172.17.0.1/private buster-staging/main armhf libsoup-gnome2.4-1 armhf 2.64.2-2 [17.5 kB]
Get:223 http://172.17.0.1/private buster-staging/main armhf librest-0.7-0 armhf 0.8.1-1 [27.8 kB]
Get:224 http://172.17.0.1/private buster-staging/main armhf libwayland-client0 armhf 1.16.0-1 [21.2 kB]
Get:225 http://172.17.0.1/private buster-staging/main armhf libwayland-cursor0 armhf 1.16.0-1 [13.0 kB]
Get:226 http://172.17.0.1/private buster-staging/main armhf libwayland-egl1 armhf 1.16.0-1 [8008 B]
Get:227 http://172.17.0.1/private buster-staging/main armhf libxcursor1 armhf 1:1.1.15-2 [33.5 kB]
Get:228 http://172.17.0.1/private buster-staging/main armhf libxinerama1 armhf 2:1.1.4-1 [16.2 kB]
Get:229 http://172.17.0.1/private buster-staging/main armhf xkb-data all 2.23.1-1 [675 kB]
Get:230 http://172.17.0.1/private buster-staging/main armhf libxkbcommon0 armhf 0.8.2-1 [110 kB]
Get:231 http://172.17.0.1/private buster-staging/main armhf libgtk-3-common all 3.24.2-3 [3684 kB]
Get:232 http://172.17.0.1/private buster-staging/main armhf libgtk-3-0 armhf 3.24.2-3 [2144 kB]
Get:233 http://172.17.0.1/private buster-staging/main armhf libjs-underscore all 1.8.3~dfsg-1 [63.8 kB]
Get:234 http://172.17.0.1/private buster-staging/main armhf libjs-sphinxdoc all 1.7.9-1 [92.3 kB]
Get:235 http://172.17.0.1/private buster-staging/main armhf liblapack3 armhf 3.8.0-2 [1493 kB]
Get:236 http://172.17.0.1/private buster-staging/main armhf liblua5.1-0 armhf 5.1.5-8.1 [83.3 kB]
Get:237 http://172.17.0.1/private buster-staging/main armhf libncurses-dev armhf 6.1+20181013-1 [278 kB]
Get:238 http://172.17.0.1/private buster-staging/main armhf libpq5 armhf 11.1-2 [147 kB]
Get:239 http://172.17.0.1/private buster-staging/main armhf libpq-dev armhf 11.1-2 [146 kB]
Get:240 http://172.17.0.1/private buster-staging/main armhf librsvg2-bin armhf 2.44.10-1+rpi1 [33.8 kB]
Get:241 http://172.17.0.1/private buster-staging/main armhf libsqlite3-dev armhf 3.26.0+fossilbc891ac6b-1 [680 kB]
Get:242 http://172.17.0.1/private buster-staging/main armhf libtinfo-dev armhf 6.1+20181013-1 [932 B]
Get:243 http://172.17.0.1/private buster-staging/main armhf libwebpdemux2 armhf 0.6.1-2 [86.7 kB]
Get:244 http://172.17.0.1/private buster-staging/main armhf libyaml-0-2 armhf 0.2.1-1 [38.8 kB]
Get:245 http://172.17.0.1/private buster-staging/main armhf llvm-7-runtime armhf 1:7.0.1-4+rpi1 [159 kB]
Get:246 http://172.17.0.1/private buster-staging/main armhf llvm-7 armhf 1:7.0.1-4+rpi1 [3770 kB]
Get:247 http://172.17.0.1/private buster-staging/main armhf llvm-7-dev armhf 1:7.0.1-4+rpi1 [20.6 MB]
Get:248 http://172.17.0.1/private buster-staging/main armhf lsb-release all 10.2018112800+rpi1 [27.7 kB]
Get:249 http://172.17.0.1/private buster-staging/main armhf pandoc-data all 2.2.1-3 [329 kB]
Get:250 http://172.17.0.1/private buster-staging/main armhf pandoc armhf 2.2.1-3+b1 [17.5 MB]
Get:251 http://172.17.0.1/private buster-staging/main armhf postgresql-client-common all 198 [83.6 kB]
Get:252 http://172.17.0.1/private buster-staging/main armhf ssl-cert all 1.0.39 [20.8 kB]
Get:253 http://172.17.0.1/private buster-staging/main armhf postgresql-common all 198 [221 kB]
Get:254 http://172.17.0.1/private buster-staging/main armhf postgresql-server-dev-11 armhf 11.1-2 [909 kB]
Get:255 http://172.17.0.1/private buster-staging/main armhf postgresql-server-dev-all all 198 [73.1 kB]
Get:256 http://172.17.0.1/private buster-staging/main armhf preview-latex-style all 11.91-2 [201 kB]
Get:257 http://172.17.0.1/private buster-staging/main armhf python-babel-localedata all 2.6.0+dfsg.1-1 [4083 kB]
Get:258 http://172.17.0.1/private buster-staging/main armhf python-six all 1.12.0-1 [15.7 kB]
Get:259 http://172.17.0.1/private buster-staging/main armhf python-dateutil all 2.6.1-1 [61.1 kB]
Get:260 http://172.17.0.1/private buster-staging/main armhf python-pkg-resources all 40.6.2-1 [181 kB]
Get:261 http://172.17.0.1/private buster-staging/main armhf python-numpy armhf 1:1.16.0~rc2-2 [1867 kB]
Get:262 http://172.17.0.1/private buster-staging/main armhf python-tz all 2018.7-1 [33.6 kB]
Get:263 http://172.17.0.1/private buster-staging/main armhf python-pandas-lib armhf 0.23.3-1+b1 [2931 kB]
Get:264 http://172.17.0.1/private buster-staging/main armhf python-pandas all 0.23.3-1 [1743 kB]
Get:265 http://172.17.0.1/private buster-staging/main armhf python-pil armhf 5.3.0-1 [360 kB]
Get:266 http://172.17.0.1/private buster-staging/main armhf python3-pkg-resources all 40.6.2-1 [152 kB]
Get:267 http://172.17.0.1/private buster-staging/main armhf python3-tz all 2018.7-1 [27.0 kB]
Get:268 http://172.17.0.1/private buster-staging/main armhf python3-babel all 2.6.0+dfsg.1-1 [96.7 kB]
Get:269 http://172.17.0.1/private buster-staging/main armhf python3-certifi all 2018.8.24-1 [140 kB]
Get:270 http://172.17.0.1/private buster-staging/main armhf python3-chardet all 3.0.4-2 [80.6 kB]
Get:271 http://172.17.0.1/private buster-staging/main armhf python3-commonmark-bkrs all 0.5.4+ds-2 [28.2 kB]
Get:272 http://172.17.0.1/private buster-staging/main armhf python3-roman all 2.0.0-3 [8768 B]
Get:273 http://172.17.0.1/private buster-staging/main armhf python3-docutils all 0.14+dfsg-3 [377 kB]
Get:274 http://172.17.0.1/private buster-staging/main armhf python3-idna all 2.6-1 [34.3 kB]
Get:275 http://172.17.0.1/private buster-staging/main armhf python3-imagesize all 1.0.0-1 [4960 B]
Get:276 http://172.17.0.1/private buster-staging/main armhf python3-markupsafe armhf 1.1.0-1 [14.4 kB]
Get:277 http://172.17.0.1/private buster-staging/main armhf python3-jinja2 all 2.10-1 [106 kB]
Get:278 http://172.17.0.1/private buster-staging/main armhf python3-pyparsing all 2.2.0+dfsg1-2 [89.6 kB]
Get:279 http://172.17.0.1/private buster-staging/main armhf python3-six all 1.12.0-1 [15.7 kB]
Get:280 http://172.17.0.1/private buster-staging/main armhf python3-packaging all 18.0-1 [20.3 kB]
Get:281 http://172.17.0.1/private buster-staging/main armhf python3-pygments all 2.2.0+dfsg-2 [588 kB]
Get:282 http://172.17.0.1/private buster-staging/main armhf python3-recommonmark all 0.4.0+ds-5 [14.9 kB]
Get:283 http://172.17.0.1/private buster-staging/main armhf python3-urllib3 all 1.24-1 [96.8 kB]
Get:284 http://172.17.0.1/private buster-staging/main armhf python3-requests all 2.20.0-2 [66.7 kB]
Get:285 http://172.17.0.1/private buster-staging/main armhf sphinx-common all 1.7.9-1 [437 kB]
Get:286 http://172.17.0.1/private buster-staging/main armhf python3-alabaster all 0.7.8-1 [18.4 kB]
Get:287 http://172.17.0.1/private buster-staging/main armhf python3-sphinx all 1.7.9-1 [449 kB]
Get:288 http://172.17.0.1/private buster-staging/main armhf rapidjson-dev all 1.1.0+dfsg2-4 [98.6 kB]
Get:289 http://172.17.0.1/private buster-staging/main armhf texlive-fonts-recommended all 2018.20181214-1 [5293 kB]
Get:290 http://172.17.0.1/private buster-staging/main armhf texlive-plain-generic all 2018.20181214-1 [24.3 MB]
Get:291 http://172.17.0.1/private buster-staging/main armhf texlive-generic-extra all 2018.20181214-1 [31.7 kB]
Get:292 http://172.17.0.1/private buster-staging/main armhf texlive-latex-recommended all 2018.20181214-1 [15.4 MB]
Get:293 http://172.17.0.1/private buster-staging/main armhf texlive-pictures all 2018.20181214-1 [4154 kB]
Get:294 http://172.17.0.1/private buster-staging/main armhf texlive-latex-extra all 2018.20181214-1 [12.2 MB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 385 MB in 51s (7560 kB/s)
Selecting previously unselected package libbsd0:armhf.
(Reading database ... 15814 files and directories currently installed.)
Preparing to unpack .../00-libbsd0_0.9.1-1_armhf.deb ...
Unpacking libbsd0:armhf (0.9.1-1) ...
Selecting previously unselected package bsdmainutils.
Preparing to unpack .../01-bsdmainutils_11.1.2_armhf.deb ...
Unpacking bsdmainutils (11.1.2) ...
Selecting previously unselected package libuchardet0:armhf.
Preparing to unpack .../02-libuchardet0_0.0.6-3_armhf.deb ...
Unpacking libuchardet0:armhf (0.0.6-3) ...
Selecting previously unselected package groff-base.
Preparing to unpack .../03-groff-base_1.22.4-2_armhf.deb ...
Unpacking groff-base (1.22.4-2) ...
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Unpacking libpipeline1:armhf (1.5.0-2) ...
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Unpacking man-db (2.8.5-1) ...
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Unpacking libsigsegv2:armhf (2.12-2) ...
Selecting previously unselected package m4.
Preparing to unpack .../07-m4_1.4.18-2_armhf.deb ...
Unpacking m4 (1.4.18-2) ...
Selecting previously unselected package flex.
Preparing to unpack .../08-flex_2.6.4-6.2_armhf.deb ...
Unpacking flex (2.6.4-6.2) ...
Selecting previously unselected package libfftw3-double3:armhf.
Preparing to unpack .../09-libfftw3-double3_3.3.8-2_armhf.deb ...
Unpacking libfftw3-double3:armhf (3.3.8-2) ...
Selecting previously unselected package libfreetype6:armhf.
Preparing to unpack .../10-libfreetype6_2.9.1-3_armhf.deb ...
Unpacking libfreetype6:armhf (2.9.1-3) ...
Selecting previously unselected package ucf.
Preparing to unpack .../11-ucf_3.0038+nmu1_all.deb ...
Moving old data out of the way
Unpacking ucf (3.0038+nmu1) ...
Selecting previously unselected package fonts-dejavu-core.
Preparing to unpack .../12-fonts-dejavu-core_2.37-1_all.deb ...
Unpacking fonts-dejavu-core (2.37-1) ...
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Preparing to unpack .../13-fontconfig-config_2.13.1-2_all.deb ...
Unpacking fontconfig-config (2.13.1-2) ...
Selecting previously unselected package libfontconfig1:armhf.
Preparing to unpack .../14-libfontconfig1_2.13.1-2_armhf.deb ...
Unpacking libfontconfig1:armhf (2.13.1-2) ...
Selecting previously unselected package libde265-0:armhf.
Preparing to unpack .../15-libde265-0_1.0.3-1+rpi1+b9_armhf.deb ...
Unpacking libde265-0:armhf (1.0.3-1+rpi1+b9) ...
Selecting previously unselected package libx265-165:armhf.
Preparing to unpack .../16-libx265-165_2.9-3_armhf.deb ...
Unpacking libx265-165:armhf (2.9-3) ...
Selecting previously unselected package libheif1:armhf.
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Unpacking libheif1:armhf (1.3.2-1+b1) ...
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Unpacking libjbig0:armhf (2.1-3.1+b2) ...
Selecting previously unselected package libjpeg62-turbo:armhf.
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Unpacking libjpeg62-turbo:armhf (1:1.5.2-2+b1) ...
Selecting previously unselected package liblcms2-2:armhf.
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Unpacking liblcms2-2:armhf (2.9-3) ...
Selecting previously unselected package libglib2.0-0:armhf.
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Unpacking libglib2.0-0:armhf (2.58.2-3) ...
Selecting previously unselected package liblqr-1-0:armhf.
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Unpacking liblqr-1-0:armhf (0.4.2-2.1) ...
Selecting previously unselected package libltdl7:armhf.
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Unpacking libltdl7:armhf (2.4.6-6) ...
Selecting previously unselected package libopenjp2-7:armhf.
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Unpacking libopenjp2-7:armhf (2.3.0-1.1) ...
Selecting previously unselected package libwebp6:armhf.
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Unpacking libwebp6:armhf (0.6.1-2) ...
Selecting previously unselected package libtiff5:armhf.
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Unpacking libtiff5:armhf (4.0.10-3) ...
Selecting previously unselected package libwebpmux3:armhf.
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Unpacking libwebpmux3:armhf (0.6.1-2) ...
Selecting previously unselected package libxau6:armhf.
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Unpacking libxau6:armhf (1:1.0.8-1+b2) ...
Selecting previously unselected package libxdmcp6:armhf.
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Unpacking libxdmcp6:armhf (1:1.1.2-3) ...
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Unpacking libxcb1:armhf (1.13.1-2) ...
Selecting previously unselected package libx11-data.
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Unpacking libx11-data (2:1.6.7-1) ...
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Unpacking libx11-6:armhf (2:1.6.7-1) ...
Selecting previously unselected package libxext6:armhf.
Preparing to unpack .../33-libxext6_2%3a1.3.3-1+b2_armhf.deb ...
Unpacking libxext6:armhf (2:1.3.3-1+b2) ...
Selecting previously unselected package libicu63:armhf.
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Unpacking libicu63:armhf (63.1-5) ...
Selecting previously unselected package libxml2:armhf.
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Unpacking libxml2:armhf (2.9.4+dfsg1-7+b1) ...
Selecting previously unselected package imagemagick-6-common.
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Unpacking imagemagick-6-common (8:6.9.10.23+dfsg-2) ...
Selecting previously unselected package libmagickcore-6.q16-6:armhf.
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Unpacking libmagickcore-6.q16-6:armhf (8:6.9.10.23+dfsg-2) ...
Selecting previously unselected package libmagickwand-6.q16-6:armhf.
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Unpacking libmagickwand-6.q16-6:armhf (8:6.9.10.23+dfsg-2) ...
Selecting previously unselected package poppler-data.
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Unpacking poppler-data (0.4.9-2) ...
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Adding 'diversion of /usr/bin/pg_config to /usr/bin/pg_config.libpq-dev by postgresql-common'
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Setting up libgs9-common (9.26~dfsg-2) ...
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Installing new version of config file /etc/mime.types ...
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Processing triggers for libc-bin (2.28-2) ...
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Processing triggers for systemd (240-2+rpi1) ...
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Setting up postgresql-common (198) ...
supported-versions: WARNING! Unknown distribution: raspbian
debian found in ID_LIKE, treating as Debian
Adding user postgres to group ssl-cert

Creating config file /etc/postgresql-common/createcluster.conf with new version
Building PostgreSQL dictionaries from installed myspell/hunspell packages...
Removing obsolete dictionary files:
Created symlink /etc/systemd/system/multi-user.target.wants/postgresql.service -> /lib/systemd/system/postgresql.service.
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update-alternatives: using /usr/bin/bison.yacc to provide /usr/bin/yacc (yacc) in auto mode
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Setting up libpaper1:armhf (1.1.26) ...

Creating config file /etc/papersize with new version
Setting up binfmt-support (2.1.8-2.1) ...
mount: /proc/sys/fs/binfmt_misc: cannot mount binfmt_misc read-only.
update-binfmts: warning: Couldn't mount the binfmt_misc filesystem on /proc/sys/fs/binfmt_misc.
mount: /proc/sys/fs/binfmt_misc: cannot mount binfmt_misc read-only.
update-binfmts: warning: Couldn't mount the binfmt_misc filesystem on /proc/sys/fs/binfmt_misc.
mount: /proc/sys/fs/binfmt_misc: cannot mount binfmt_misc read-only.
update-binfmts: warning: Couldn't mount the binfmt_misc filesystem on /proc/sys/fs/binfmt_misc.
Created symlink /etc/systemd/system/multi-user.target.wants/binfmt-support.service -> /lib/systemd/system/binfmt-support.service.
Running in chroot, ignoring request.
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Installing new version of config file /etc/fonts/fonts.conf ...
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update-language: texlive-base not installed and configured, doing nothing!
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update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
Setting up llvm-7-runtime (1:7.0.1-4+rpi1) ...
mount: /proc/sys/fs/binfmt_misc: cannot mount binfmt_misc read-only.
update-binfmts: warning: Couldn't mount the binfmt_misc filesystem on /proc/sys/fs/binfmt_misc.
Setting up libpython3.7:armhf (3.7.2-1) ...
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Setting up automake (1:1.16.1-4) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
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Setting up man-db (2.8.5-1) ...
Not building database; man-db/auto-update is not 'true'.
Created symlink /etc/systemd/system/timers.target.wants/man-db.timer -> /lib/systemd/system/man-db.timer.
Setting up libpython2-stdlib:armhf (2.7.15-3) ...
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Setting up libgtk-3-common (3.24.2-3) ...
Setting up libboost-system-dev:armhf (1.67.0.1+b1) ...
Setting up clang-7 (1:7.0.1-4+rpi1) ...
Setting up python3-alabaster (0.7.8-1) ...
Setting up liblapack3:armhf (3.8.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up python3-idna (2.6-1) ...
Setting up python3-six (1.12.0-1) ...
Setting up libboost-regex1.67-dev:armhf (1.67.0-11) ...
Setting up libx11-6:armhf (2:1.6.7-1) ...
Setting up doxygen (1.8.13-10) ...
Setting up python3-pyparsing (2.2.0+dfsg1-2) ...
Setting up python3-certifi (2018.8.24-1) ...
Setting up python3-commonmark-bkrs (0.5.4+ds-2) ...
Setting up python3-pkg-resources (40.6.2-1) ...
Setting up llvm-7 (1:7.0.1-4+rpi1) ...
Setting up python3.7-dev (3.7.2-1) ...
Setting up lsb-release (10.2018112800+rpi1) ...
Setting up python2 (2.7.15-3) ...
Setting up python3-markupsafe (1.1.0-1) ...
Setting up llvm-7-dev (1:7.0.1-4+rpi1) ...
Setting up libpython2-dev:armhf (2.7.15-3) ...
Setting up libpython-stdlib:armhf (2.7.15-3) ...
Setting up python3-chardet (3.0.4-2) ...
Setting up python3-jinja2 (2.10-1) ...
Setting up glib-networking:armhf (2.58.0-2) ...
Setting up python2-dev (2.7.15-3) ...
Setting up libxcomposite1:armhf (1:0.4.4-2) ...
Setting up libxcb-shm0:armhf (1.13.1-2) ...
Setting up libxpm4:armhf (1:3.5.12-1) ...
Setting up libxt6:armhf (1:1.1.5-1) ...
Setting up libxrender1:armhf (1:0.9.10-1) ...
Setting up libboost-regex-dev:armhf (1.67.0.1+b1) ...
Setting up libavahi-client3:armhf (0.7-4+b1) ...
Setting up python3-urllib3 (1.24-1) ...
Setting up python3-packaging (18.0-1) ...
Setting up python3-lib2to3 (3.7.1-1) ...
Setting up python3-tz (2018.7-1) ...
Setting up python3-distutils (3.7.1-1) ...
Setting up python (2.7.15-3) ...
Setting up fontconfig (2.13.1-2) ...
Regenerating fonts cache... done.
Setting up libcups2:armhf (2.2.10-3+b2) ...
Setting up python3-pygments (2.2.0+dfsg-2) ...
Setting up libpython-dev:armhf (2.7.15-3) ...
Setting up python3-roman (2.0.0-3) ...
Setting up postgresql-server-dev-11 (11.1-2) ...
Setting up python3-imagesize (1.0.0-1) ...
Setting up libboost-thread-dev:armhf (1.67.0.1+b1) ...
Setting up libxext6:armhf (2:1.3.3-1+b2) ...
Setting up libxfixes3:armhf (1:5.0.3-1) ...
Setting up python-dev (2.7.15-3) ...
Setting up libatspi2.0-0:armhf (2.30.0-5) ...
Setting up libgdk-pixbuf2.0-0:armhf (2.38.0+dfsg-7) ...
Setting up python-tz (2018.7-1) ...
Setting up libsoup2.4-1:armhf (2.64.2-2) ...
Setting up libsoup-gnome2.4-1:armhf (2.64.2-2) ...
Setting up python-pkg-resources (40.6.2-1) ...
Setting up python-numpy (1:1.16.0~rc2-2) ...
Setting up libxmu6:armhf (2:1.1.2-2) ...
Setting up python3-babel (2.6.0+dfsg.1-1) ...
update-alternatives: using /usr/bin/pybabel-python3 to provide /usr/bin/pybabel (pybabel) in auto mode
Setting up libcupsimage2:armhf (2.2.10-3+b2) ...
Setting up postgresql-server-dev-all (198) ...
Setting up gtk-update-icon-cache (3.24.2-3) ...
Setting up python-six (1.12.0-1) ...
Setting up libxcursor1:armhf (1:1.1.15-2) ...
Setting up libmagickcore-6.q16-6:armhf (8:6.9.10.23+dfsg-2) ...
Setting up python-pandas-lib (0.23.3-1+b1) ...
Setting up libpango-1.0-0:armhf (1.42.4-6) ...
Setting up libatk-bridge2.0-0:armhf (2.30.0-2) ...
Setting up python3-requests (2.20.0-2) ...
Setting up librest-0.7-0:armhf (0.8.1-1) ...
Setting up libgs9:armhf (9.26~dfsg-2) ...
Setting up dh-python (3.20180927) ...
Setting up python-pil:armhf (5.3.0-1) ...
Setting up libxrandr2:armhf (2:1.5.1-1) ...
Setting up libxi6:armhf (2:1.7.9-1) ...
Setting up libxaw7:armhf (2:1.0.13-1) ...
Setting up libcairo2:armhf (1.16.0-2) ...
Setting up libxinerama1:armhf (2:1.1.4-1) ...
Setting up libxdamage1:armhf (1:1.1.4-3) ...
Setting up libcairo-gobject2:armhf (1.16.0-2) ...
Setting up python3-dev (3.7.1-3) ...
Setting up texlive-binaries (2018.20181218.49446-1) ...
update-alternatives: using /usr/bin/xdvi-xaw to provide /usr/bin/xdvi.bin (xdvi.bin) in auto mode
update-alternatives: using /usr/bin/bibtex.original to provide /usr/bin/bibtex (bibtex) in auto mode
Setting up libpangoft2-1.0-0:armhf (1.42.4-6) ...
Setting up python-dateutil (2.6.1-1) ...
Setting up libmagickwand-6.q16-6:armhf (8:6.9.10.23+dfsg-2) ...
Setting up texlive-base (2018.20181214-1) ...
tl-paper: setting paper size for dvips to a4: /var/lib/texmf/dvips/config/config-paper.ps
tl-paper: setting paper size for dvipdfmx to a4: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg
tl-paper: setting paper size for xdvi to a4: /var/lib/texmf/xdvi/XDvi-paper
tl-paper: setting paper size for pdftex to a4: /var/lib/texmf/tex/generic/config/pdftexconfig.tex
tl-paper: setting paper size for dvipdfmx to letter: /var/lib/texmf/dvipdfmx/dvipdfmx-paper.cfg
tl-paper: setting paper size for dvips to letter: /var/lib/texmf/dvips/config/config-paper.ps
tl-paper: setting paper size for pdftex to letter: /var/lib/texmf/tex/generic/config/pdftexconfig.tex
tl-paper: setting paper size for xdvi to letter: /var/lib/texmf/xdvi/XDvi-paper
Setting up texlive-fonts-recommended (2018.20181214-1) ...
Setting up texlive-plain-generic (2018.20181214-1) ...
Setting up texlive-latex-base (2018.20181214-1) ...
Setting up texlive-latex-recommended (2018.20181214-1) ...
Setting up libboost-python1.67-dev (1.67.0-11) ...
Setting up texlive-pictures (2018.20181214-1) ...
Setting up python-pandas (0.23.3-1) ...
Setting up imagemagick-6.q16 (8:6.9.10.23+dfsg-2) ...
update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare (compare) in auto mode
update-alternatives: using /usr/bin/compare-im6.q16 to provide /usr/bin/compare-im6 (compare-im6) in auto mode
update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate (animate) in auto mode
update-alternatives: using /usr/bin/animate-im6.q16 to provide /usr/bin/animate-im6 (animate-im6) in auto mode
update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert (convert) in auto mode
update-alternatives: using /usr/bin/convert-im6.q16 to provide /usr/bin/convert-im6 (convert-im6) in auto mode
update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite (composite) in auto mode
update-alternatives: using /usr/bin/composite-im6.q16 to provide /usr/bin/composite-im6 (composite-im6) in auto mode
update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure (conjure) in auto mode
update-alternatives: using /usr/bin/conjure-im6.q16 to provide /usr/bin/conjure-im6 (conjure-im6) in auto mode
update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import (import) in auto mode
update-alternatives: using /usr/bin/import-im6.q16 to provide /usr/bin/import-im6 (import-im6) in auto mode
update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify (identify) in auto mode
update-alternatives: using /usr/bin/identify-im6.q16 to provide /usr/bin/identify-im6 (identify-im6) in auto mode
update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream (stream) in auto mode
update-alternatives: using /usr/bin/stream-im6.q16 to provide /usr/bin/stream-im6 (stream-im6) in auto mode
update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display (display) in auto mode
update-alternatives: using /usr/bin/display-im6.q16 to provide /usr/bin/display-im6 (display-im6) in auto mode
update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage (montage) in auto mode
update-alternatives: using /usr/bin/montage-im6.q16 to provide /usr/bin/montage-im6 (montage-im6) in auto mode
update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify (mogrify) in auto mode
update-alternatives: using /usr/bin/mogrify-im6.q16 to provide /usr/bin/mogrify-im6 (mogrify-im6) in auto mode
Setting up libpangocairo-1.0-0:armhf (1.42.4-6) ...
Setting up imagemagick (8:6.9.10.23+dfsg-2) ...
Setting up texlive-generic-extra (2018.20181214-1) ...
Setting up latexmk (1:4.61-0.1) ...
Setting up libboost-python-dev (1.67.0.1+b1) ...
Setting up librsvg2-2:armhf (2.44.10-1+rpi1) ...
Setting up texlive-latex-extra (2018.20181214-1) ...
Setting up librsvg2-common:armhf (2.44.10-1+rpi1) ...
Setting up adwaita-icon-theme (3.30.1-1) ...
update-alternatives: using /usr/share/icons/Adwaita/cursor.theme to provide /usr/share/icons/default/index.theme (x-cursor-theme) in auto mode
Setting up libgtk-3-0:armhf (3.24.2-3) ...
Setting up librsvg2-bin (2.44.10-1+rpi1) ...
Processing triggers for sgml-base (1.29) ...
Setting up docutils-common (0.14+dfsg-3) ...
Processing triggers for sgml-base (1.29) ...
Setting up python3-docutils (0.14+dfsg-3) ...
update-alternatives: using /usr/share/docutils/scripts/python3/rst-buildhtml to provide /usr/bin/rst-buildhtml (rst-buildhtml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2html to provide /usr/bin/rst2html (rst2html) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2html4 to provide /usr/bin/rst2html4 (rst2html4) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2html5 to provide /usr/bin/rst2html5 (rst2html5) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2latex to provide /usr/bin/rst2latex (rst2latex) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2man to provide /usr/bin/rst2man (rst2man) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt to provide /usr/bin/rst2odt (rst2odt) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2odt_prepstyles to provide /usr/bin/rst2odt_prepstyles (rst2odt_prepstyles) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2pseudoxml to provide /usr/bin/rst2pseudoxml (rst2pseudoxml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2s5 to provide /usr/bin/rst2s5 (rst2s5) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2xetex to provide /usr/bin/rst2xetex (rst2xetex) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rst2xml to provide /usr/bin/rst2xml (rst2xml) in auto mode
update-alternatives: using /usr/share/docutils/scripts/python3/rstpep2html to provide /usr/bin/rstpep2html (rstpep2html) in auto mode
Setting up python3-recommonmark (0.4.0+ds-5) ...
Setting up python3-sphinx (1.7.9-1) ...
update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-apidoc to provide /usr/bin/sphinx-apidoc (sphinx-apidoc) in auto mode
update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-autogen to provide /usr/bin/sphinx-autogen (sphinx-autogen) in auto mode
update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-build to provide /usr/bin/sphinx-build (sphinx-build) in auto mode
update-alternatives: using /usr/share/sphinx/scripts/python3/sphinx-quickstart to provide /usr/bin/sphinx-quickstart (sphinx-quickstart) in auto mode
Setting up dh-autoreconf (19) ...
Setting up dh-strip-nondeterminism (1.0.0-1) ...
Setting up debhelper (12) ...
Setting up sbuild-build-depends-rdkit-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.28-2) ...
Processing triggers for systemd (240-2+rpi1) ...
Processing triggers for tex-common (6.10) ...
Running updmap-sys. This may take some time... done.
Running mktexlsr /var/lib/texmf ... done.
Building format(s) --all.
	This may take some time... done.
Processing triggers for libgdk-pixbuf2.0-0:armhf (2.38.0+dfsg-7) ...
W: No sandbox user '_apt' on the system, can not drop privileges

+------------------------------------------------------------------------------+
| Build environment                                                            |
+------------------------------------------------------------------------------+

Kernel: Linux 4.4.0-124-generic armhf (armv8l)
Toolchain package versions: binutils_2.31.1-11+rpi1 dpkg-dev_1.19.2 g++-8_8.2.0-13+rpi1 gcc-8_8.2.0-13+rpi1 libc6-dev_2.28-2 libstdc++-8-dev_8.2.0-13+rpi1 libstdc++6_8.2.0-13+rpi1 linux-libc-dev_4.18.20-2+rpi1
Package versions: adduser_3.118 adwaita-icon-theme_3.30.1-1 apt_1.8.0~alpha3 autoconf_2.69-11 automake_1:1.16.1-4 autopoint_0.19.8.1-9 autotools-dev_20180224.1 base-files_10.1+rpi1 base-passwd_3.5.45 bash_4.4.18-3.1 binfmt-support_2.1.8-2.1 binutils_2.31.1-11+rpi1 binutils-arm-linux-gnueabihf_2.31.1-11+rpi1 binutils-common_2.31.1-11+rpi1 bison_2:3.2.4.dfsg-1 bsdmainutils_11.1.2 bsdutils_1:2.33.1-0.1 build-essential_12.5 bzip2_1.0.6-9 ca-certificates_20170717 clang-7_1:7.0.1-4+rpi1 cmake_3.13.2-1 cmake-data_3.13.2-1 coreutils_8.30-1 cpio_2.12+dfsg-6 cpp_4:8.2.0-2+rpi1 cpp-8_8.2.0-13+rpi1 dash_0.5.10.2-4 dbus_1.12.12-1 dbus-user-session_1.12.12-1 dconf-gsettings-backend_0.30.1-2 dconf-service_0.30.1-2 dctrl-tools_2.24-3 debconf_1.5.69 debhelper_12 debianutils_4.8.6 dh-autoreconf_19 dh-python_3.20180927 dh-strip-nondeterminism_1.0.0-1 diffutils_1:3.6-1 dirmngr_2.2.12-1+rpi1 distro-info-data_0.39 dmsetup_2:1.02.155-1 docutils-common_0.14+dfsg-3 doxygen_1.8.13-10 dpkg_1.19.2 dpkg-dev_1.19.2 dwz_0.12-3 e2fslibs_1.44.5-1 e2fsprogs_1.44.5-1 e2fsprogs-l10n_1.44.5-1 fakeroot_1.23-1 fdisk_2.33.1-0.1 file_1:5.34-2 findutils_4.6.0+git+20181018-1 flex_2.6.4-6.2 fontconfig_2.13.1-2 fontconfig-config_2.13.1-2 fonts-dejavu-core_2.37-1 fonts-lmodern_2.004.5-5 g++_4:8.2.0-2+rpi1 g++-8_8.2.0-13+rpi1 gcc_4:8.2.0-2+rpi1 gcc-4.6-base_4.6.4-5+rpi1 gcc-4.7-base_4.7.3-11+rpi1 gcc-4.8-base_4.8.5-4 gcc-4.9-base_4.9.4-2+rpi1+b19 gcc-5-base_5.5.0-8 gcc-8_8.2.0-13+rpi1 gcc-8-base_8.2.0-13+rpi1 gettext_0.19.8.1-9 gettext-base_0.19.8.1-9 glib-networking_2.58.0-2 glib-networking-common_2.58.0-2 glib-networking-services_2.58.0-2 gnupg_2.2.12-1+rpi1 gnupg-agent_2.2.12-1+rpi1 gnupg-l10n_2.2.12-1+rpi1 gnupg-utils_2.2.12-1+rpi1 gpg_2.2.12-1+rpi1 gpg-agent_2.2.12-1+rpi1 gpg-wks-client_2.2.12-1+rpi1 gpg-wks-server_2.2.12-1+rpi1 gpgconf_2.2.12-1+rpi1 gpgsm_2.2.12-1+rpi1 gpgv_2.2.12-1+rpi1 grep_3.1-3 groff-base_1.22.4-2 gsettings-desktop-schemas_3.28.1-1 gtk-update-icon-cache_3.24.2-3 gzip_1.9-3 hicolor-icon-theme_0.17-2 hostname_3.21 icu-devtools_63.1-5 imagemagick_8:6.9.10.23+dfsg-2 imagemagick-6-common_8:6.9.10.23+dfsg-2 imagemagick-6.q16_8:6.9.10.23+dfsg-2 inetutils-ping_2:1.9.4-5 init-system-helpers_1.56+nmu1 initramfs-tools_0.132 initramfs-tools-core_0.132 intltool-debian_0.35.0+20060710.4 klibc-utils_2.0.4-14+rpi1 kmod_25-2 krb5-locales_1.16.2-1 latexmk_1:4.61-0.1 libacl1_2.2.52-3 libapparmor1_2.13.2-3 libapt-pkg5.0_1.8.0~alpha3 libarchive-zip-perl_1.64-1 libarchive13_3.3.3-3 libargon2-1_0~20171227-0.1 libasan5_8.2.0-13+rpi1 libassuan0_2.5.2-1 libatk-bridge2.0-0_2.30.0-2 libatk1.0-0_2.30.0-2 libatk1.0-data_2.30.0-2 libatomic1_8.2.0-13+rpi1 libatspi2.0-0_2.30.0-5 libattr1_1:2.4.47-2 libaudit-common_1:2.8.4-2 libaudit1_1:2.8.4-2+b1 libavahi-client3_0.7-4+b1 libavahi-common-data_0.7-4+b1 libavahi-common3_0.7-4+b1 libbinutils_2.31.1-11+rpi1 libbison-dev_2:3.2.4.dfsg-1 libblas3_3.8.0-2 libblkid1_2.33.1-0.1 libboost-atomic1.67-dev_1.67.0-11 libboost-atomic1.67.0_1.67.0-11 libboost-chrono1.67-dev_1.67.0-11 libboost-chrono1.67.0_1.67.0-11 libboost-date-time1.67-dev_1.67.0-11 libboost-date-time1.67.0_1.67.0-11 libboost-dev_1.67.0.1+b1 libboost-python-dev_1.67.0.1+b1 libboost-python1.67-dev_1.67.0-11 libboost-python1.67.0_1.67.0-11 libboost-regex-dev_1.67.0.1+b1 libboost-regex1.67-dev_1.67.0-11 libboost-regex1.67.0_1.67.0-11 libboost-serialization1.67-dev_1.67.0-11 libboost-serialization1.67.0_1.67.0-11 libboost-system-dev_1.67.0.1+b1 libboost-system1.67-dev_1.67.0-11 libboost-system1.67.0_1.67.0-11 libboost-thread-dev_1.67.0.1+b1 libboost-thread1.67-dev_1.67.0-11 libboost-thread1.67.0_1.67.0-11 libboost1.67-dev_1.67.0-11 libbrotli1_1.0.7-2 libbsd0_0.9.1-1 libbz2-1.0_1.0.6-9 libc-bin_2.28-2 libc-dev-bin_2.28-2 libc6_2.28-2 libc6-dev_2.28-2 libcairo-gobject2_1.16.0-2 libcairo2_1.16.0-2 libcap-ng0_0.7.9-1+b1 libcap2_1:2.25-1.2 libcc1-0_8.2.0-13+rpi1 libclang-common-7-dev_1:7.0.1-4+rpi1 libclang1-6.0_1:6.0.1-9.2+rpi1 libclang1-7_1:7.0.1-4+rpi1 libcolord2_1.4.3-3 libcom-err2_1.44.5-1 libcroco3_0.6.12-3 libcryptsetup12_2:2.0.6-1 libcryptsetup4_2:1.7.5-1 libcups2_2.2.10-3+b2 libcupsimage2_2.2.10-3+b2 libcurl4_7.62.0-1 libdatrie1_0.2.12-1 libdb5.3_5.3.28+dfsg1-0.2 libdbus-1-3_1.12.12-1 libdconf1_0.30.1-2 libde265-0_1.0.3-1+rpi1+b9 libdebconfclient0_0.246 libdevmapper1.02.1_2:1.02.155-1 libdpkg-perl_1.19.2 libdrm-common_2.4.95-1+rpi1 libdrm2_2.4.95-1+rpi1 libedit2_3.1-20181209-1 libelf1_0.175-2 libepoxy0_1.5.3-0.1 libexpat1_2.2.6-1 libexpat1-dev_2.2.6-1 libext2fs2_1.44.5-1 libfakeroot_1.23-1 libfdisk1_2.33.1-0.1 libffi-dev_3.2.1-9 libffi6_3.2.1-9 libfftw3-double3_3.3.8-2 libfile-stripnondeterminism-perl_1.0.0-1 libfontconfig1_2.13.1-2 libfreetype6_2.9.1-3 libfribidi0_1.0.5-3 libgc1c2_1:7.6.4-0.4 libgcc-8-dev_8.2.0-13+rpi1 libgcc1_1:8.2.0-13+rpi1 libgcrypt20_1.8.4-4 libgdbm-compat4_1.18.1-2 libgdbm3_1.8.3-14 libgdbm6_1.18.1-2 libgdk-pixbuf2.0-0_2.38.0+dfsg-7 libgdk-pixbuf2.0-common_2.38.0+dfsg-7 libgfortran5_8.2.0-13+rpi1 libglib2.0-0_2.58.2-3 libgmp10_2:6.1.2+dfsg-4 libgnutls30_3.6.5-2+rpi1 libgomp1_8.2.0-13+rpi1 libgpg-error-l10n_1.33-3 libgpg-error0_1.33-3 libgraphite2-3_1.3.12-1 libgs9_9.26~dfsg-2 libgs9-common_9.26~dfsg-2 libgssapi-krb5-2_1.16.2-1 libgtk-3-0_3.24.2-3 libgtk-3-common_3.24.2-3 libharfbuzz-icu0_2.3.0-1 libharfbuzz0b_2.3.0-1 libheif1_1.3.2-1+b1 libhogweed4_3.4.1~rc1-1 libice6_2:1.0.9-2 libicu-dev_63.1-5 libicu63_63.1-5 libidn11_1.33-2.2 libidn2-0_2.0.5-1 libijs-0.35_0.35-13 libip4tc0_1.8.2-3 libisl19_0.20-2 libjbig0_2.1-3.1+b2 libjbig2dec0_0.15-2 libjpeg62-turbo_1:1.5.2-2+b1 libjs-jquery_3.2.1-1 libjs-sphinxdoc_1.7.9-1 libjs-underscore_1.8.3~dfsg-1 libjson-c3_0.12.1-1.3 libjson-glib-1.0-0_1.4.4-2 libjson-glib-1.0-common_1.4.4-2 libjsoncpp1_1.7.4-3 libk5crypto3_1.16.2-1 libkeyutils1_1.5.9-9.3 libklibc_2.0.4-14+rpi1 libkmod2_25-2 libkpathsea6_2018.20181218.49446-1 libkrb5-3_1.16.2-1 libkrb5support0_1.16.2-1 libksba8_1.3.5-2 liblapack3_3.8.0-2 liblcms2-2_2.9-3 libldap-2.4-2_2.4.47+dfsg-1 libldap-common_2.4.47+dfsg-1 libllvm6.0_1:6.0.1-9.2+rpi1 libllvm7_1:7.0.1-4+rpi1 liblqr-1-0_0.4.2-2.1 libltdl7_2.4.6-6 liblua5.1-0_5.1.5-8.1 liblz4-1_1.8.3-1 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.34-2 libmagic1_1:5.34-2 libmagickcore-6.q16-6_8:6.9.10.23+dfsg-2 libmagickwand-6.q16-6_8:6.9.10.23+dfsg-2 libmount1_2.33.1-0.1 libmpc3_1.1.0-1 libmpdec2_2.4.2-2 libmpfr6_4.0.1-2 libncurses-dev_6.1+20181013-1 libncurses5_6.1+20181013-1 libncurses6_6.1+20181013-1 libncursesw5_6.1+20181013-1 libncursesw6_6.1+20181013-1 libnettle6_3.4.1~rc1-1 libnghttp2-14_1.35.1-1 libnpth0_1.6-1 libnss-systemd_240-2+rpi1 libobjc-8-dev_8.2.0-13+rpi1 libobjc4_8.2.0-13+rpi1 libopenjp2-7_2.3.0-1.1 libp11-kit0_0.23.14-2 libpam-modules_1.1.8-3.8 libpam-modules-bin_1.1.8-3.8 libpam-runtime_1.1.8-3.8 libpam-systemd_240-2+rpi1 libpam0g_1.1.8-3.8 libpango-1.0-0_1.42.4-6 libpangocairo-1.0-0_1.42.4-6 libpangoft2-1.0-0_1.42.4-6 libpaper-utils_1.1.26 libpaper1_1.1.26 libpcre3_2:8.39-11+rpi1 libperl5.24_5.24.1-7 libperl5.28_5.28.1-3 libpipeline1_1.5.0-2 libpixman-1-0_0.36.0-1 libplymouth4_0.9.4-1 libpng16-16_1.6.36-2 libpotrace0_1.15-1 libpq-dev_11.1-2 libpq5_11.1-2 libprocps7_2:3.3.15-2 libproxy1v5_0.4.15-5 libpsl5_0.20.2-2 libptexenc1_2018.20181218.49446-1 libpython-dev_2.7.15-3 libpython-stdlib_2.7.15-3 libpython2-dev_2.7.15-3 libpython2-stdlib_2.7.15-3 libpython2.7_2.7.15-5 libpython2.7-dev_2.7.15-5 libpython2.7-minimal_2.7.15-5 libpython2.7-stdlib_2.7.15-5 libpython3-dev_3.7.1-3 libpython3-stdlib_3.7.1-3 libpython3.7_3.7.2-1 libpython3.7-dev_3.7.2-1 libpython3.7-minimal_3.7.2-1 libpython3.7-stdlib_3.7.2-1 libreadline7_7.0-5 librest-0.7-0_0.8.1-1 librhash0_1.3.7-1 librsvg2-2_2.44.10-1+rpi1 librsvg2-bin_2.44.10-1+rpi1 librsvg2-common_2.44.10-1+rpi1 librtmp1_2.4+20151223.gitfa8646d.1-2 libsasl2-2_2.1.27~rc8-1 libsasl2-modules-db_2.1.27~rc8-1 libseccomp2_2.3.3-3+b1 libselinux1_2.8-1+b1 libsemanage-common_2.8-2 libsemanage1_2.8-2 libsepol1_2.8-1 libsigsegv2_2.12-2 libsm6_2:1.2.2-1+b3 libsmartcols1_2.33.1-0.1 libsoup-gnome2.4-1_2.64.2-2 libsoup2.4-1_2.64.2-2 libsqlite3-0_3.26.0+fossilbc891ac6b-1 libsqlite3-dev_3.26.0+fossilbc891ac6b-1 libss2_1.44.5-1 libssh2-1_1.8.0-2 libssl1.1_1.1.1a-1 libstdc++-8-dev_8.2.0-13+rpi1 libstdc++6_8.2.0-13+rpi1 libsynctex2_2018.20181218.49446-1 libsystemd0_240-2+rpi1 libtasn1-6_4.13-3 libteckit0_2.5.8+ds2-5 libtexlua52_2018.20181218.49446-1 libtexlua53_2018.20181218.49446-1 libtexluajit2_2018.20181218.49446-1 libthai-data_0.1.28-1 libthai0_0.1.28-1 libtiff5_4.0.10-3 libtinfo-dev_6.1+20181013-1 libtinfo5_6.1+20181013-1 libtinfo6_6.1+20181013-1 libtool_2.4.6-6 libubsan1_8.2.0-13+rpi1 libuchardet0_0.0.6-3 libudev1_240-2+rpi1 libunistring2_0.9.10-1 libustr-1.0-1_1.0.4-6 libuuid1_2.33.1-0.1 libuv1_1.24.0-1 libwayland-client0_1.16.0-1 libwayland-cursor0_1.16.0-1 libwayland-egl1_1.16.0-1 libwebp6_0.6.1-2 libwebpdemux2_0.6.1-2 libwebpmux3_0.6.1-2 libwoff1_1.0.2-1 libx11-6_2:1.6.7-1 libx11-data_2:1.6.7-1 libx265-165_2.9-3 libxapian30_1.4.9-1 libxau6_1:1.0.8-1+b2 libxaw7_2:1.0.13-1 libxcb-render0_1.13.1-2 libxcb-shm0_1.13.1-2 libxcb1_1.13.1-2 libxcomposite1_1:0.4.4-2 libxcursor1_1:1.1.15-2 libxdamage1_1:1.1.4-3 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1+b2 libxfixes3_1:5.0.3-1 libxi6_2:1.7.9-1 libxinerama1_2:1.1.4-1 libxkbcommon0_0.8.2-1 libxml2_2.9.4+dfsg1-7+b1 libxmu6_2:1.1.2-2 libxpm4_1:3.5.12-1 libxrandr2_2:1.5.1-1 libxrender1_1:0.9.10-1 libxt6_1:1.1.5-1 libxxhash0_0.6.5-2 libyaml-0-2_0.2.1-1 libzstd1_1.3.8+dfsg-3+rpi1 libzzip-0-13_0.13.62-3.1 linux-base_4.5 linux-libc-dev_4.18.20-2+rpi1 llvm-7_1:7.0.1-4+rpi1 llvm-7-dev_1:7.0.1-4+rpi1 llvm-7-runtime_1:7.0.1-4+rpi1 login_1:4.5-1.1 lsb-base_10.2018112800+rpi1 lsb-release_10.2018112800+rpi1 m4_1.4.18-2 make_4.2.1-1.2 makedev_2.3.1-94 man-db_2.8.5-1 mawk_1.3.3-17 mime-support_3.61 mount_2.33.1-0.1 multiarch-support_2.28-2 nano_3.2-1 ncurses-base_6.1+20181013-1 ncurses-bin_6.1+20181013-1 netbase_5.5 openssl_1.1.1a-1 pandoc_2.2.1-3+b1 pandoc-data_2.2.1-3 passwd_1:4.5-1.1 patch_2.7.6-3 perl_5.28.1-3 perl-base_5.28.1-3 perl-modules-5.24_5.24.1-7 perl-modules-5.28_5.28.1-3 pinentry-curses_1.1.0-1 plymouth_0.9.4-1 po-debconf_1.0.21 poppler-data_0.4.9-2 postgresql-client-common_198 postgresql-common_198 postgresql-server-dev-11_11.1-2 postgresql-server-dev-all_198 preview-latex-style_11.91-2 procps_2:3.3.15-2 python_2.7.15-3 python-babel-localedata_2.6.0+dfsg.1-1 python-dateutil_2.6.1-1 python-dev_2.7.15-3 python-minimal_2.7.15-3 python-numpy_1:1.16.0~rc2-2 python-pandas_0.23.3-1 python-pandas-lib_0.23.3-1+b1 python-pil_5.3.0-1 python-pkg-resources_40.6.2-1 python-six_1.12.0-1 python-tz_2018.7-1 python2_2.7.15-3 python2-dev_2.7.15-3 python2-minimal_2.7.15-3 python2.7_2.7.15-5 python2.7-dev_2.7.15-5 python2.7-minimal_2.7.15-5 python3_3.7.1-3 python3-alabaster_0.7.8-1 python3-babel_2.6.0+dfsg.1-1 python3-certifi_2018.8.24-1 python3-chardet_3.0.4-2 python3-commonmark-bkrs_0.5.4+ds-2 python3-dev_3.7.1-3 python3-distutils_3.7.1-1 python3-docutils_0.14+dfsg-3 python3-idna_2.6-1 python3-imagesize_1.0.0-1 python3-jinja2_2.10-1 python3-lib2to3_3.7.1-1 python3-markupsafe_1.1.0-1 python3-minimal_3.7.1-3 python3-packaging_18.0-1 python3-pkg-resources_40.6.2-1 python3-pygments_2.2.0+dfsg-2 python3-pyparsing_2.2.0+dfsg1-2 python3-recommonmark_0.4.0+ds-5 python3-requests_2.20.0-2 python3-roman_2.0.0-3 python3-six_1.12.0-1 python3-sphinx_1.7.9-1 python3-tz_2018.7-1 python3-urllib3_1.24-1 python3.7_3.7.2-1 python3.7-dev_3.7.2-1 python3.7-minimal_3.7.2-1 rapidjson-dev_1.1.0+dfsg2-4 raspbian-archive-keyring_20120528.2 readline-common_7.0-5 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-rdkit-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12 sgml-base_1.29 shared-mime-info_1.10-1 sphinx-common_1.7.9-1 ssl-cert_1.0.39 systemd_240-2+rpi1 systemd-sysv_240-2+rpi1 sysvinit-utils_2.93-3 t1utils_1.41-3 tar_1.30+dfsg-4 tex-common_6.10 texlive-base_2018.20181214-1 texlive-binaries_2018.20181218.49446-1 texlive-fonts-recommended_2018.20181214-1 texlive-generic-extra_2018.20181214-1 texlive-latex-base_2018.20181214-1 texlive-latex-extra_2018.20181214-1 texlive-latex-recommended_2018.20181214-1 texlive-pictures_2018.20181214-1 texlive-plain-generic_2018.20181214-1 tzdata_2018i-1 ucf_3.0038+nmu1 udev_240-2+rpi1 util-linux_2.33.1-0.1 x11-common_1:7.7+19 xdg-utils_1.1.3-1 xkb-data_2.23.1-1 xml-core_0.18 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-1

+------------------------------------------------------------------------------+
| Build                                                                        |
+------------------------------------------------------------------------------+


Unpack source
-------------

gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Wed Jan  9 09:59:04 2019 UTC
gpgv:                using RSA key 9CA877749FAB2E4FA96862ECDC686A27B43481B0
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./rdkit_201809.1+dfsg-3.dsc
dpkg-source: info: extracting rdkit in /<<BUILDDIR>>/rdkit-201809.1+dfsg
dpkg-source: info: unpacking rdkit_201809.1+dfsg.orig.tar.xz
dpkg-source: info: unpacking rdkit_201809.1+dfsg-3.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying postgres_v11_support.patch
dpkg-source: info: applying postgres_Makefile_fixes.patch
dpkg-source: info: applying postgres_disable_failing_tests.patch
dpkg-source: info: applying disable_hanging_test.patch
dpkg-source: info: applying sphinx_imgconverter.patch
dpkg-source: info: applying catch2_header.patch

Check disk space
----------------

Sufficient free space for build

User Environment
----------------

APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=buster-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=buster-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=112
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=buster-staging-armhf-sbuild-f47d97f2-0e24-4798-8fe3-eaed89a9dd91
SCHROOT_UID=107
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd

dpkg-buildpackage
-----------------

dpkg-buildpackage: info: source package rdkit
dpkg-buildpackage: info: source version 201809.1+dfsg-3
dpkg-buildpackage: info: source distribution unstable
 dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
 fakeroot debian/rules clean
pg_buildext checkcontrol
supported-versions: WARNING! Unknown distribution: raspbian
debian found in ID_LIKE, treating as Debian
dh clean --with python2 --buildsystem=cmake --parallel
   debian/rules override_dh_auto_clean
make[1]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg'
find /<<BUILDDIR>>/rdkit-201809.1+dfsg -name "*.pyc" | xargs rm -f
rm -f -r Projects/DbCLI/testData/bzr/ rdkit/Chem/inchi.py
rm -f -r Docs/Book/_build Code/docs rdkit/docs Code/doxygen_sqlite3.db
rm -f \
Code/ForceField/MMFF/test_data/MMFF94_dative_min.sdf \
Code/ForceField/MMFF/test_data/MMFF94_dative_min_from_SMILES.sdf \
Code/ForceField/MMFF/test_data/MMFF94_hypervalent_min.sdf \
Code/ForceField/MMFF/test_data/MMFF94_hypervalent_min_from_SMILES.sdf \
Code/ForceField/MMFF/test_data/MMFF94_reference.log \
Code/ForceField/MMFF/test_data/MMFF94s_reference.log \
Code/ForceField/MMFF/test_data/testMMFFForceField.log \
Code/GraphMol/Depictor/test_data/cis_trans_cpp.out.sdf \
Code/GraphMol/Depictor/test_data/collisions.out.sdf \
Code/GraphMol/Depictor/test_data/first_200.out.sdf \
Code/GraphMol/Depictor/test_data/test1.out.sdf \
Code/GraphMol/FileParsers/test_data/blah.sdf \
Code/GraphMol/FileParsers/test_data/cdk2_stereo.sdf \
Code/GraphMol/FileParsers/test_data/outNCI_few.sdf \
Code/GraphMol/FileParsers/test_data/outNCI_few.tdt \
Code/GraphMol/FileParsers/test_data/outNCI_first_200.props.sdf \
Code/GraphMol/FileParsers/test_data/outSmiles.csv \
Code/GraphMol/ForceFieldHelpers/UFF/test_data/Issue62.sdf \
Code/GraphMol/MolAlign/test_data/ref_e2_pyCrippenO3A.sdf \
Code/GraphMol/SLNParse/lex.yysln.cpp \
Code/GraphMol/SLNParse/sln.tab.cpp \
Code/GraphMol/SLNParse/sln.tab.hpp \
Code/GraphMol/SmilesParse/lex.yysmarts.cpp \
Code/GraphMol/SmilesParse/lex.yysmiles.cpp \
Code/GraphMol/SmilesParse/smarts.tab.cpp \
Code/GraphMol/SmilesParse/smarts.tab.hpp \
Code/GraphMol/SmilesParse/smiles.tab.cpp \
Code/GraphMol/SmilesParse/smiles.tab.hpp \
Code/GraphMol/Wrap/test_data/outNCI_few.sdf \
Code/GraphMol/Wrap/test_data/outSmiles.txt \
Code/RDGeneral/versions.cpp \
Docs/Book/Cartridge.rst \
Docs/Book/Cookbook.rst \
Docs/Book/Install.rst \
Docs/Book/Overview.rst \
rdkit/ML/Data/test_data/testgeneral.dat.pkl \
rdkit/ML/Data/test_data/testquant.qdat.pkl
rm -f Code/RDGeneral/versions.h rdkit/sping/tests/testallps.ps
dh_auto_clean
pg_buildext clean /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit build-%v
supported-versions: WARNING! Unknown distribution: raspbian
debian found in ID_LIKE, treating as Debian
### clean 11 ###
make[1]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg'
   dh_clean -O--buildsystem=cmake -O--parallel
 debian/rules build-arch
dh build-arch --with python2 --buildsystem=cmake --parallel
   dh_update_autotools_config -a -O--buildsystem=cmake -O--parallel
   debian/rules override_dh_auto_configure
make[1]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg'
dh_auto_configure -- \
    -DCMAKE_BUILD_TYPE=None -DCMAKE_SKIP_RPATH=ON \
    -DRDK_INSTALL_INTREE=OFF -DRDK_INSTALL_STATIC_LIBS=OFF \
    -DRDK_BUILD_THREADSAFE_SSS=ON -DRDK_BUILD_PYTHON_WRAPPERS=ON \
    -DRDK_OPTIMIZE_NATIVE=OFF -DRDK_BUILD_COORDGEN_SUPPORT=OFF \
    -DRDK_BUILD_MOLINTERCHANGE_SUPPORT=OFF
	cd obj-arm-linux-gnueabihf && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/arm-linux-gnueabihf -DCMAKE_BUILD_TYPE=None -DCMAKE_SKIP_RPATH=ON -DRDK_INSTALL_INTREE=OFF -DRDK_INSTALL_STATIC_LIBS=OFF -DRDK_BUILD_THREADSAFE_SSS=ON -DRDK_BUILD_PYTHON_WRAPPERS=ON -DRDK_OPTIMIZE_NATIVE=OFF -DRDK_BUILD_COORDGEN_SUPPORT=OFF -DRDK_BUILD_MOLINTERCHANGE_SUPPORT=OFF ..
-- The C compiler identification is GNU 8.2.0
-- The CXX compiler identification is GNU 8.2.0
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Check if the system is big endian
-- Searching 16 bit integer
-- Looking for sys/types.h
-- Looking for sys/types.h - found
-- Looking for stdint.h
-- Looking for stdint.h - found
-- Looking for stddef.h
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-- Found PythonInterp: /usr/bin/python (found version "2.7.15") 
-- Found PythonLibs: /usr/lib/arm-linux-gnueabihf/libpython2.7.so (found version "2.7.15+") 
Python Install directory /usr/lib/python2.7/dist-packages
PYTHON Py_ENABLE_SHARED: 1
PYTHON USING LINK LINE: -pthread -shared -Wl,-O1 -Wl,-Bsymbolic-functions -Wl,-z,relro -fno-strict-aliasing -DNDEBUG -g -fwrapv -O2 -Wall -Wstrict-prototypes -Wdate-time -D_FORTIFY_SOURCE=2 -g -fdebug-prefix-map=/build/python2.7-7yWIbs/python2.7-2.7.15=. -fstack-protector-strong -Wformat -Werror=format-security
-- Could NOT find Eigen3 (missing: EIGEN3_INCLUDE_DIR EIGEN3_VERSION_OK) (Required is at least version "2.91.0")
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-- Found Threads: TRUE  
-- Boost version: 1.67.0
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--   serialization
== Using strict rotor definition
== Updating Filters.cpp from pains file
== Done updating pains files
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CMake Warning:
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make -f Code/RDBoost/CMakeFiles/RDBoost.dir/build.make Code/RDBoost/CMakeFiles/RDBoost.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDGeneral /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/testDict.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDGeneral /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDGeneral/CMakeFiles/testRDValue.dir/DependInfo.cmake --color=
make -f Code/DataStructs/CMakeFiles/DataStructs.dir/build.make Code/DataStructs/CMakeFiles/DataStructs.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDBoost /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDBoost/CMakeFiles/RDBoost.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/DataStructs.dir/DependInfo.cmake --color=
Scanning dependencies of target testDict
Scanning dependencies of target testRDValue
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/RDGeneral/CMakeFiles/testDict.dir/build.make Code/RDGeneral/CMakeFiles/testDict.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/RDGeneral/CMakeFiles/testRDValue.dir/build.make Code/RDGeneral/CMakeFiles/testRDValue.dir/build
Scanning dependencies of target RDBoost
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/RDBoost/CMakeFiles/RDBoost.dir/build.make Code/RDBoost/CMakeFiles/RDBoost.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  3%] Building CXX object Code/RDGeneral/CMakeFiles/testDict.dir/testDict.cpp.o
[  4%] Building CXX object Code/RDGeneral/CMakeFiles/testRDValue.dir/testRDValue.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_RDGENERAL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testDict.dir/testDict.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/testDict.cpp
Scanning dependencies of target DataStructs
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_RDGENERAL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testRDValue.dir/testRDValue.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/testRDValue.cpp
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/DataStructs/CMakeFiles/DataStructs.dir/build.make Code/DataStructs/CMakeFiles/DataStructs.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  4%] Building CXX object Code/RDBoost/CMakeFiles/RDBoost.dir/Wrap.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDBoost && /usr/bin/c++  -DRDBoost_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDBOOST_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/RDBoost.dir/Wrap.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap.cpp
[  5%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/BitVect.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/DataStructs.dir/BitVect.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/BitVect.cpp
[  5%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/SparseBitVect.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/DataStructs.dir/SparseBitVect.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/SparseBitVect.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDValue-taggedunion.h:40,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDValue.h:39,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/testRDValue.cpp:2:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long double&}; _Tp = long double; _Alloc = std::allocator<long double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<long double, std::allocator<long double> >::iterator' {aka '__gnu_cxx::__normal_iterator<long double*, std::vector<long double, std::allocator<long double> > >'} changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDValue-taggedunion.h:40,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDValue.h:39,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/testRDValue.cpp:2:
/usr/include/c++/8/bits/stl_vector.h: In function 'void testVector() [with T = double]':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
[  5%] Linking CXX shared library ../../lib/libRDKitRDBoost.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDBoost && /usr/bin/cmake -E cmake_link_script CMakeFiles/RDBoost.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitRDBoost.so.1 -o ../../lib/libRDKitRDBoost.so.1.2018.09.1 CMakeFiles/RDBoost.dir/Wrap.cpp.o ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDBoost && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitRDBoost.so.1.2018.09.1 ../../lib/libRDKitRDBoost.so.1 ../../lib/libRDKitRDBoost.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/testDict.cpp:14:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
[  5%] Built target RDBoost
make -f Code/Numerics/CMakeFiles/testMatrices.dir/build.make Code/Numerics/CMakeFiles/testMatrices.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/CMakeFiles/testMatrices.dir/DependInfo.cmake --color=
Scanning dependencies of target testMatrices
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Numerics/CMakeFiles/testMatrices.dir/build.make Code/Numerics/CMakeFiles/testMatrices.dir/build
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  6%] Building CXX object Code/Numerics/CMakeFiles/testMatrices.dir/testMatrices.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testMatrices.dir/testMatrices.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/testMatrices.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDValue-taggedunion.h:40,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDValue.h:39,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/testRDValue.cpp:2:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long double}; _Tp = long double; _Alloc = std::allocator<long double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<long double, std::allocator<long double> >::iterator' {aka '__gnu_cxx::__normal_iterator<long double*, std::vector<long double, std::allocator<long double> > >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDValue-taggedunion.h:40,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDValue.h:39,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/testRDValue.cpp:2:
/usr/include/c++/8/bits/stl_vector.h: In function 'void testVector() [with T = long double]':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long double*, std::vector<long double, std::allocator<long double> > >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long double*, std::vector<long double, std::allocator<long double> > >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDValue-taggedunion.h:40,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDValue.h:39,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/testRDValue.cpp:2:
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long double*, std::vector<long double, std::allocator<long double> > >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[  6%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/ExplicitBitVect.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/DataStructs.dir/ExplicitBitVect.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/ExplicitBitVect.cpp
In file included from /usr/include/c++/8/map:60,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/testDict.cpp:14:
/usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >&&>, std::tuple<>}; _Key = std::__cxx11::basic_string<char>; _Val = std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny>; _KeyOfValue = std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> >; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> >'} changed in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:61,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/testDict.cpp:14:
/usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](std::map<_Key, _Tp, _Compare, _Alloc>::key_type&&) [with _Key = std::__cxx11::basic_string<char>; _Tp = RDKit::RDAny; _Compare = std::less<std::__cxx11::basic_string<char> >; _Alloc = std::allocator<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> >]':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<std::__cxx11::basic_string<char>, std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny>, std::_Select1st<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> >, std::less<std::__cxx11::basic_string<char> >, std::allocator<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const std::__cxx11::basic_string<char>, RDKit::RDAny> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[  6%] Linking CXX executable testRDValue
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/cmake -E cmake_link_script CMakeFiles/testRDValue.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testRDValue.dir/testRDValue.cpp.o  -o testRDValue ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  6%] Built target testRDValue
make -f Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/build.make Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/EigenSolvers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/DependInfo.cmake --color=
Scanning dependencies of target EigenSolvers
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make -f Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/build.make Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  6%] Building CXX object Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/PowerEigenSolver.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers && /usr/bin/c++  -DEigenSolvers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_EIGENSOLVERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/EigenSolvers.dir/PowerEigenSolver.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/EigenSolvers/PowerEigenSolver.cpp
[  6%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/Utils.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/DataStructs.dir/Utils.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/Utils.cpp
[  6%] Linking CXX executable testDict
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDGeneral && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDict.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testDict.dir/testDict.cpp.o  -o testDict ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
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make -f Code/Catalogs/CMakeFiles/Catalogs.dir/build.make Code/Catalogs/CMakeFiles/Catalogs.dir/depend
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cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Catalogs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Catalogs/CMakeFiles/Catalogs.dir/DependInfo.cmake --color=
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cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Catalogs && /usr/bin/c++  -DCatalogs_EXPORTS -DRDKIT_CATALOGS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Catalogs.dir/Catalog.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs/Catalog.cpp
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cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMatrices.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testMatrices.dir/testMatrices.cpp.o  -o testMatrices ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
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make -f Code/Query/CMakeFiles/testQuery.dir/build.make Code/Query/CMakeFiles/testQuery.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Query /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Query/CMakeFiles/testQuery.dir/DependInfo.cmake --color=
Scanning dependencies of target testQuery
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cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Query && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testQuery.dir/test.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/test.cpp
[  6%] Linking CXX shared library ../../../lib/libRDKitEigenSolvers.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers && /usr/bin/cmake -E cmake_link_script CMakeFiles/EigenSolvers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitEigenSolvers.so.1 -o ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 CMakeFiles/EigenSolvers.dir/PowerEigenSolver.cpp.o ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1 ../../../lib/libRDKitEigenSolvers.so
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make -f Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/build.make Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataManip/MetricMatrixCalc /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/DependInfo.cmake --color=
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[  6%] Building CXX object Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/testMatCalc.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testMatCalc.dir/testMatCalc.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataManip/MetricMatrixCalc/testMatCalc.cpp
[  6%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/base64.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/DataStructs.dir/base64.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/base64.cpp
[  6%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/BitOps.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/DataStructs.dir/BitOps.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/BitOps.cpp
[  6%] Linking CXX executable testMatCalc
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMatCalc.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testMatCalc.dir/testMatCalc.cpp.o  -o testMatCalc ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
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cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SIMDIVPICKERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSimDivPickers_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SimDivPickers.dir/DistPicker.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/DistPicker.cpp
[  6%] Building CXX object Code/Catalogs/CMakeFiles/Catalogs.dir/CatalogParams.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Catalogs && /usr/bin/c++  -DCatalogs_EXPORTS -DRDKIT_CATALOGS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Catalogs.dir/CatalogParams.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs/CatalogParams.cpp
[  6%] Building CXX object Code/Catalogs/CMakeFiles/Catalogs.dir/CatalogEntry.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Catalogs && /usr/bin/c++  -DCatalogs_EXPORTS -DRDKIT_CATALOGS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Catalogs.dir/CatalogEntry.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs/CatalogEntry.cpp
[  7%] Linking CXX shared library ../../lib/libRDKitCatalogs.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Catalogs && /usr/bin/cmake -E cmake_link_script CMakeFiles/Catalogs.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitCatalogs.so.1 -o ../../lib/libRDKitCatalogs.so.1.2018.09.1 CMakeFiles/Catalogs.dir/Catalog.cpp.o CMakeFiles/Catalogs.dir/CatalogParams.cpp.o CMakeFiles/Catalogs.dir/CatalogEntry.cpp.o ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Catalogs && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../lib/libRDKitCatalogs.so.1 ../../lib/libRDKitCatalogs.so
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cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/Cluster/Murtagh /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/DependInfo.cmake --color=
Scanning dependencies of target Clustering
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cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh && /usr/bin/c++  -DClustering_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_HC_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Clustering.dir/Clustering.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/Cluster/Murtagh/Clustering.cpp
[  7%] Building CXX object Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/MaxMinPicker.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SIMDIVPICKERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSimDivPickers_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SimDivPickers.dir/MaxMinPicker.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/MaxMinPicker.cpp
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/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testQuery.dir/test.cpp.o  -o testQuery ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
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Scanning dependencies of target rdBase
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cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDBoost/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdBase_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdBase.dir/RDBase.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap/RDBase.cpp
[  8%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/DiscreteDistMat.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/DataStructs.dir/DiscreteDistMat.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/DiscreteDistMat.cpp
[  8%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/DiscreteValueVect.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/DataStructs.dir/DiscreteValueVect.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/DiscreteValueVect.cpp
[  8%] Building CXX object Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/HierarchicalClusterPicker.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SIMDIVPICKERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSimDivPickers_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SimDivPickers.dir/HierarchicalClusterPicker.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/HierarchicalClusterPicker.cpp
[  8%] Linking CXX shared module ../../../../rdkit/ML/Cluster/Clustering.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh && /usr/bin/cmake -E cmake_link_script CMakeFiles/Clustering.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/ML/Cluster/Clustering.so CMakeFiles/Clustering.dir/Clustering.cpp.o ../../../../lib/libRDKithc.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  8%] Built target Clustering
[  8%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/FPBReader.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/DataStructs.dir/FPBReader.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/FPBReader.cpp
[  8%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/MultiFPBReader.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DDataStructs_EXPORTS -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/DataStructs.dir/MultiFPBReader.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/MultiFPBReader.cpp
[  8%] Linking CXX shared library ../../lib/libRDKitSimDivPickers.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/cmake -E cmake_link_script CMakeFiles/SimDivPickers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitSimDivPickers.so.1 -o ../../lib/libRDKitSimDivPickers.so.1.2018.09.1 CMakeFiles/SimDivPickers.dir/DistPicker.cpp.o CMakeFiles/SimDivPickers.dir/MaxMinPicker.cpp.o CMakeFiles/SimDivPickers.dir/HierarchicalClusterPicker.cpp.o ../../lib/libRDKithc.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitSimDivPickers.so.1.2018.09.1 ../../lib/libRDKitSimDivPickers.so.1 ../../lib/libRDKitSimDivPickers.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
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cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/DependInfo.cmake --color=
Scanning dependencies of target testSimDivPickers
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make -f Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  8%] Building CXX object Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/testPickers.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SIMDIVPICKERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testSimDivPickers.dir/testPickers.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/testPickers.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/dynamic_bitset/dynamic_bitset.hpp:24,
                 from /usr/include/boost/dynamic_bitset.hpp:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/ExplicitBitVect.h:16,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/FPBReader.cpp:15:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<double, unsigned int>}; _Tp = std::pair<double, unsigned int>; _Alloc = std::allocator<std::pair<double, unsigned int> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::pair<double, unsigned int> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair<double, unsigned int>}; _Tp = std::pair<double, unsigned int>; _Alloc = std::allocator<std::pair<double, unsigned int> >]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
                 from /usr/include/boost/core/swap.hpp:25,
                 from /usr/include/boost/utility/swap.hpp:15,
                 from /usr/include/boost/tuple/detail/tuple_basic.hpp:40,
                 from /usr/include/boost/tuple/tuple.hpp:28,
                 from /usr/include/boost/tuple/tuple_comparison.hpp:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/MultiFPBReader.cpp:11:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<RDKit::{anonymous}::tplSorter>]':
/usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
     __unguarded_linear_insert(_RandomAccessIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/bits/stl_algo.h:61,
                 from /usr/include/c++/8/algorithm:62,
                 from /usr/include/boost/core/swap.hpp:25,
                 from /usr/include/boost/utility/swap.hpp:15,
                 from /usr/include/boost/tuple/detail/tuple_basic.hpp:40,
                 from /usr/include/boost/tuple/tuple.hpp:28,
                 from /usr/include/boost/tuple/tuple_comparison.hpp:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/MultiFPBReader.cpp:11:
/usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >; _Distance = int; _Tp = boost::tuples::tuple<double, unsigned int, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::{anonymous}::tplSorter>]':
/usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
     ^~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
                 from /usr/include/boost/core/swap.hpp:25,
                 from /usr/include/boost/utility/swap.hpp:15,
                 from /usr/include/boost/tuple/detail/tuple_basic.hpp:40,
                 from /usr/include/boost/tuple/tuple.hpp:28,
                 from /usr/include/boost/tuple/tuple_comparison.hpp:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/MultiFPBReader.cpp:11:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::{anonymous}::tplSorter>]':
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
     __insertion_sort(_RandomAccessIterator __first,
     ^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<RDKit::{anonymous}::tplSorter>]':
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
     __introsort_loop(_RandomAccessIterator __first,
     ^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
                 from /usr/include/boost/dynamic_bitset/dynamic_bitset.hpp:23,
                 from /usr/include/boost/dynamic_bitset.hpp:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/ExplicitBitVect.h:16,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/FPBReader.cpp:15:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairGreater<double, unsigned int> >]':
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
     __insertion_sort(_RandomAccessIterator __first,
     ^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairGreater<double, unsigned int> >]':
/usr/include/c++/8/bits/stl_algo.h:1880:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
     __final_insertion_sort(_RandomAccessIterator __first,
     ^~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1880:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1880:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
  std::__insertion_sort(__first, __last, __comp);
  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Ranking.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/MultiFPBReader.cpp:14:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {boost::tuples::tuple<double, unsigned int, unsigned int, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>}; _Tp = boost::tuples::tuple<double, unsigned int, unsigned int>; _Alloc = std::allocator<boost::tuples::tuple<double, unsigned int, unsigned int> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> >::iterator' {aka '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {boost::tuples::tuple<double, unsigned int, unsigned int, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type, boost::tuples::null_type>}; _Tp = boost::tuples::tuple<double, unsigned int, unsigned int>; _Alloc = std::allocator<boost::tuples::tuple<double, unsigned int, unsigned int> >]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/bits/stl_algo.h:61,
                 from /usr/include/c++/8/algorithm:62,
                 from /usr/include/boost/dynamic_bitset/dynamic_bitset.hpp:23,
                 from /usr/include/boost/dynamic_bitset.hpp:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/ExplicitBitVect.h:16,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/FPBReader.cpp:15:
/usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >; _Distance = int; _Tp = std::pair<double, unsigned int>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairGreater<double, unsigned int> >]':
/usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
     ^~~~~~~~~~~~~
[  8%] Linking CXX executable testSimDivPickers
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSimDivPickers.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testSimDivPickers.dir/testPickers.cpp.o  -o testSimDivPickers ../../lib/libRDKitSimDivPickers.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread ../../lib/libRDKithc.so.1.2018.09.1 
In file included from /usr/include/c++/8/algorithm:62,
                 from /usr/include/boost/dynamic_bitset/dynamic_bitset.hpp:23,
                 from /usr/include/boost/dynamic_bitset.hpp:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/ExplicitBitVect.h:16,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/FPBReader.cpp:15:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairGreater<double, unsigned int> >]':
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
     __introsort_loop(_RandomAccessIterator __first,
     ^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In member function 'std::vector<std::pair<double, unsigned int> > RDKit::FPBReader::getTverskyNeighbors(const uint8_t*, double, double, double, bool) const':
/usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
    std::__introsort_loop(__first, __last,
    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
     std::__lg(__last - __first) * 2,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     __comp);
     ~~~~~~~              
/usr/include/c++/8/bits/stl_algo.h:1971:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
    std::__final_insertion_sort(__first, __last, __comp);
    ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In member function 'std::vector<std::pair<double, unsigned int> > RDKit::FPBReader::getTanimotoNeighbors(const uint8_t*, double, bool) const':
/usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
    std::__introsort_loop(__first, __last,
    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
     std::__lg(__last - __first) * 2,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     __comp);
     ~~~~~~~              
/usr/include/c++/8/bits/stl_algo.h:1971:31: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, unsigned int>*, std::vector<std::pair<double, unsigned int> > >' changed in GCC 7.1
    std::__final_insertion_sort(__first, __last, __comp);
    ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  8%] Built target testSimDivPickers
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >; _Tp = boost::tuples::tuple<double, unsigned int, unsigned int>; _Alloc = std::allocator<boost::tuples::tuple<double, unsigned int, unsigned int> >]':
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type 'std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> >::iterator' {aka '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Ranking.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/MultiFPBReader.cpp:14:
/usr/include/c++/8/bits/stl_vector.h: In function 'void RDKit::{anonymous}::generic_nbr_helper(std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> >&, T, const RDKit::{anonymous}::sim_args&, unsigned int) [with T = void (*)(unsigned int, unsigned int, const RDKit::{anonymous}::sim_args*)]':
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type 'std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> >::iterator' {aka '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >'} changed in GCC 7.1
    _M_range_insert(__pos, __first, __last,
    ^~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
In file included from /usr/include/c++/8/algorithm:62,
                 from /usr/include/boost/core/swap.hpp:25,
                 from /usr/include/boost/utility/swap.hpp:15,
                 from /usr/include/boost/tuple/detail/tuple_basic.hpp:40,
                 from /usr/include/boost/tuple/tuple.hpp:28,
                 from /usr/include/boost/tuple/tuple_comparison.hpp:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/MultiFPBReader.cpp:11:
/usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
    std::__introsort_loop(__first, __last,
    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
     std::__lg(__last - __first) * 2,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     __comp);
     ~~~~~~~              
/usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<boost::tuples::tuple<double, unsigned int, unsigned int>*, std::vector<boost::tuples::tuple<double, unsigned int, unsigned int> > >' changed in GCC 7.1
  std::__insertion_sort(__first, __last, __comp);
  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[  8%] Linking CXX shared library ../../lib/libRDKitDataStructs.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/cmake -E cmake_link_script CMakeFiles/DataStructs.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitDataStructs.so.1 -o ../../lib/libRDKitDataStructs.so.1.2018.09.1 CMakeFiles/DataStructs.dir/BitVect.cpp.o CMakeFiles/DataStructs.dir/SparseBitVect.cpp.o CMakeFiles/DataStructs.dir/ExplicitBitVect.cpp.o CMakeFiles/DataStructs.dir/Utils.cpp.o CMakeFiles/DataStructs.dir/base64.cpp.o CMakeFiles/DataStructs.dir/BitOps.cpp.o CMakeFiles/DataStructs.dir/DiscreteDistMat.cpp.o CMakeFiles/DataStructs.dir/DiscreteValueVect.cpp.o CMakeFiles/DataStructs.dir/FPBReader.cpp.o CMakeFiles/DataStructs.dir/MultiFPBReader.cpp.o ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1 ../../lib/libRDKitDataStructs.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  8%] Built target DataStructs
make -f Code/DataStructs/CMakeFiles/testDataStructs.dir/build.make Code/DataStructs/CMakeFiles/testDataStructs.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/testDataStructs.dir/DependInfo.cmake --color=
make -f Code/DataStructs/CMakeFiles/testFPB.dir/build.make Code/DataStructs/CMakeFiles/testFPB.dir/depend
make -f Code/DataStructs/CMakeFiles/testMultiFPB.dir/build.make Code/DataStructs/CMakeFiles/testMultiFPB.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/testMultiFPB.dir/DependInfo.cmake --color=
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/testFPB.dir/DependInfo.cmake --color=
Scanning dependencies of target testFPB
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
Scanning dependencies of target testDataStructs
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/DataStructs/CMakeFiles/testDataStructs.dir/build.make Code/DataStructs/CMakeFiles/testDataStructs.dir/build
Scanning dependencies of target testMultiFPB
make -f Code/DataStructs/CMakeFiles/testFPB.dir/build.make Code/DataStructs/CMakeFiles/testFPB.dir/build
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/DataStructs/CMakeFiles/testMultiFPB.dir/build.make Code/DataStructs/CMakeFiles/testMultiFPB.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  9%] Building CXX object Code/DataStructs/CMakeFiles/testDataStructs.dir/testDatastructs.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testDataStructs.dir/testDatastructs.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/testDatastructs.cpp
[  9%] Building CXX object Code/DataStructs/CMakeFiles/testFPB.dir/testFPB.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testFPB.dir/testFPB.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/testFPB.cpp
[  9%] Building CXX object Code/DataStructs/CMakeFiles/testMultiFPB.dir/testMultiFPB.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/c++  -DRDKIT_DATASTRUCTS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testMultiFPB.dir/testMultiFPB.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/testMultiFPB.cpp
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap/RDBase.cpp:15:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:336:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       result = off_type(bp::extract<off_type>(py_tell()));
                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:185:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       off_type py_pos = bp::extract<off_type>(py_tell());
                                                        ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:155:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
         off_type py_pos = bp::extract<off_type>(py_tell());
                                                          ^
[  9%] Linking CXX executable testFPB
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFPB.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testFPB.dir/testFPB.cpp.o  -o testFPB ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  9%] Built target testFPB
make -f Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/build.make Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/DependInfo.cmake --color=
Scanning dependencies of target cDataStructs
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/build.make Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  9%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/DataStructs.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/cDataStructs.dir/DataStructs.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/Wrap/DataStructs.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap/RDBase.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap/RDBase.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In static member function 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_append(Container&, boost::python::api::object) [with Container = std::vector<double>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>]':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
[  9%] Linking CXX executable testMultiFPB
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMultiFPB.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testMultiFPB.dir/testMultiFPB.cpp.o  -o testMultiFPB ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  9%] Built target testMultiFPB
make -f Code/Geometry/CMakeFiles/RDGeometryLib.dir/build.make Code/Geometry/CMakeFiles/RDGeometryLib.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/RDGeometryLib.dir/DependInfo.cmake --color=
Scanning dependencies of target RDGeometryLib
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Geometry/CMakeFiles/RDGeometryLib.dir/build.make Code/Geometry/CMakeFiles/RDGeometryLib.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  9%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/point.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++  -DRDGeometryLib_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/RDGeometryLib.dir/point.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.cpp
/usr/include/c++/8/bits/stl_vector.h: In function 'void boost::python::container_utils::extend_container(Container&, boost::python::api::object) [with Container = std::vector<double>]':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap/RDBase.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:172:5: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:172:5: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap/RDBase.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In static member function 'static void boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_delete_item(Container&, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>; bool NoProxy = false; bool NoSlice = false; Data = double; Index = unsigned int; Key = double]':
/usr/include/c++/8/bits/stl_vector.h:1348:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
                                                                       ^
In file included from /usr/include/c++/8/algorithm:62,
                 from /usr/include/boost/function/detail/prologue.hpp:13,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap/RDBase.cpp:11:
/usr/include/c++/8/bits/stl_algo.h: In function '_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const double>]':
/usr/include/c++/8/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
     __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last,
     ^~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h: In static member function 'static bool boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_contains(Container&, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>; bool NoProxy = false; bool NoSlice = false; Data = double; Index = unsigned int; Key = double]':
/usr/include/c++/8/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
       return __find_if(__first, __last, __pred,
              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
          std::__iterator_category(__first));
          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
       return __find_if(__first, __last, __pred,
              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
          std::__iterator_category(__first));
          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap/RDBase.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap/RDBase.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(std::vector<_Tp, _Alloc>::const_iterator, _InputIterator, _InputIterator) [with _InputIterator = __gnu_cxx::__normal_iterator<double*, std::vector<double> >; <template-parameter-2-2> = void; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/stl_vector.h:1266:2: note: parameter passing for argument of type 'std::vector<double>::const_iterator' {aka '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >'} changed in GCC 7.1
  insert(const_iterator __position, _InputIterator __first,
  ^~~~~~
/usr/include/c++/8/bits/stl_vector.h:1266:2: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_vector.h:1266:2: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
    _M_range_insert(__pos, __first, __last,
    ^~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_vector.h: In static member function 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<double>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<double>, boost::python::detail::final_vector_derived_policies<std::vector<double>, false>, boost::python::detail::container_element<std::vector<double>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<double>, false> >, unsigned int>; Data = double; Index = unsigned int]':
/usr/include/c++/8/bits/stl_vector.h:1348:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
                                                                       ^
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap/RDBase.cpp:11:
/usr/include/c++/8/bits/vector.tcc:149:2: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  _M_realloc_insert(begin() + (__position - cbegin()), __x);
  ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap/RDBase.cpp:11:
/usr/include/c++/8/bits/stl_vector.h:1348:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
                                                                       ^
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap/RDBase.cpp:11:
/usr/include/c++/8/bits/vector.tcc:149:2: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  _M_realloc_insert(begin() + (__position - cbegin()), __x);
  ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap/RDBase.cpp:11:
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:5,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap/RDBase.cpp:11:
/usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:113:17: note: parameter passing for argument of type 'std::vector<double>::const_iterator' {aka '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >'} changed in GCC 7.1
                 container.insert(container.begin()+from, first, last);
                 ^~~~~~~~~
/usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:113:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap/RDBase.cpp:11:
/usr/include/c++/8/bits/stl_vector.h:1348:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
                                                                       ^
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:5,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap/RDBase.cpp:11:
/usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:117:17: note: parameter passing for argument of type 'std::vector<double>::const_iterator' {aka '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >'} changed in GCC 7.1
                 container.insert(container.begin()+from, first, last);
                 ^~~~~~~~~
/usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:117:17: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap/RDBase.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In static member function 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_extend(Container&, boost::python::api::object) [with Container = std::vector<double>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<double>, false>]':
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
    _M_range_insert(__pos, __first, __last,
    ^~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
[  9%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/Transform2D.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++  -DRDGeometryLib_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/RDGeometryLib.dir/Transform2D.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Transform2D.cpp
[  9%] Linking CXX executable testDataStructs
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDataStructs.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testDataStructs.dir/testDatastructs.cpp.o  -o testDataStructs ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  9%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/DiscreteValueVect.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/cDataStructs.dir/DiscreteValueVect.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/Wrap/DiscreteValueVect.cpp
[  9%] Built target testDataStructs
make -f Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/build.make Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataManip/MetricMatrixCalc/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMetricMatrixCalc
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/build.make Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  9%] Building CXX object Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/rdMetricMatrixCalc.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMetricMatrixCalc_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMetricMatrixCalc.dir/rdMetricMatrixCalc.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataManip/MetricMatrixCalc/Wrap/rdMetricMatrixCalc.cpp
[  9%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/Transform3D.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++  -DRDGeometryLib_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/RDGeometryLib.dir/Transform3D.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Transform3D.cpp
[  9%] Linking CXX shared module ../../../rdkit/rdBase.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDBoost/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdBase.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../rdkit/rdBase.so CMakeFiles/rdBase.dir/RDBase.cpp.o ../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  9%] Built target rdBase
make -f Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build.make Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/DependInfo.cmake --color=
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataManip/MetricMatrixCalc/Wrap/rdMetricMatrixCalc.cpp:15:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h: In function 'double RDDataManip::EuclideanDistanceMetric(const T1&, const T2&, unsigned int) [with T1 = PySequenceHolder<double>; T2 = PySequenceHolder<double>]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       T res = python::extract<T>(d_seq[which]);
         ^~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       T res = python::extract<T>(d_seq[which]);
         ^~~
Scanning dependencies of target rdSimDivPickers
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build.make Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  9%] Building CXX object Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/MaxMinPicker.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSimDivPickers_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdSimDivPickers.dir/MaxMinPicker.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/Wrap/MaxMinPicker.cpp
[  9%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/UniformGrid3D.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++  -DRDGeometryLib_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/RDGeometryLib.dir/UniformGrid3D.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/UniformGrid3D.cpp
[  9%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/SparseIntVect.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/cDataStructs.dir/SparseIntVect.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/Wrap/SparseIntVect.cpp
[  9%] Linking CXX shared module ../../../../rdkit/DataManip/Metric/rdMetricMatrixCalc.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMetricMatrixCalc.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/DataManip/Metric/rdMetricMatrixCalc.so CMakeFiles/rdMetricMatrixCalc.dir/rdMetricMatrixCalc.cpp.o ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  9%] Built target rdMetricMatrixCalc
make -f Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build.make Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/InfoTheory /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/InfoTheory /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/DependInfo.cmake --color=
Scanning dependencies of target InfoTheory
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build.make Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  9%] Building CXX object Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/InfoBitRanker.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/InfoTheory && /usr/bin/c++  -DInfoTheory_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_INFOTHEORY_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/InfoTheory.dir/InfoBitRanker.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/InfoTheory/InfoBitRanker.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/InfoTheory/InfoBitRanker.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/InfoTheory/InfoBitRanker.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::pair<double, int>&}; _Tp = std::pair<double, int>; _Alloc = std::allocator<std::pair<double, int> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::pair<double, int> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<double, int>*, std::vector<std::pair<double, int> > >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::pair<double, int> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<double, int>*, std::vector<std::pair<double, int> > >'} changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/InfoTheory/InfoBitRanker.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/InfoTheory/InfoBitRanker.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In member function 'double* RDInfoTheory::InfoBitRanker::getTopN(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, int>*, std::vector<std::pair<double, int> > >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, int>*, std::vector<std::pair<double, int> > >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
[ 10%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/GridUtils.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++  -DRDGeometryLib_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/RDGeometryLib.dir/GridUtils.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/GridUtils.cpp
[ 10%] Linking CXX shared library ../../../lib/libRDKitInfoTheory.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/InfoTheory && /usr/bin/cmake -E cmake_link_script CMakeFiles/InfoTheory.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitInfoTheory.so.1 -o ../../../lib/libRDKitInfoTheory.so.1.2018.09.1 CMakeFiles/InfoTheory.dir/InfoBitRanker.cpp.o ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/InfoTheory && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitInfoTheory.so.1.2018.09.1 ../../../lib/libRDKitInfoTheory.so.1 ../../../lib/libRDKitInfoTheory.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 10%] Built target InfoTheory
make -f Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build.make Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/InfoTheory/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/DependInfo.cmake --color=
Scanning dependencies of target rdInfoTheory
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build.make Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 10%] Building CXX object Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/InfoBitRanker.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdInfoTheory_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdInfoTheory.dir/InfoBitRanker.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/InfoTheory/Wrap/InfoBitRanker.cpp
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/Wrap/MaxMinPicker.cpp: In member function 'RDKit::INT_VECT RDPickers::MaxMinPicker::lazyPick(T&, unsigned int, unsigned int, const INT_VECT&, int, double&) const [with T = RDPickers::pyobjFunctor]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/Wrap/MaxMinPicker.cpp:63:48: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
     return python::extract<double>(dp_obj(i, j));
                                                ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/Wrap/MaxMinPicker.cpp:63:48: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
     return python::extract<double>(dp_obj(i, j));
                                                ^
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/GridUtils.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/GridUtils.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDGeom::Point3D&}; _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/GridUtils.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/GridUtils.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In function 'std::vector<RDGeom::Point3D> RDGeom::findGridTerminalPoints(const RDGeom::UniformGrid3D&, double, double)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
[ 10%] Linking CXX shared library ../../lib/libRDKitRDGeometryLib.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/cmake -E cmake_link_script CMakeFiles/RDGeometryLib.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitRDGeometryLib.so.1 -o ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 CMakeFiles/RDGeometryLib.dir/point.cpp.o CMakeFiles/RDGeometryLib.dir/Transform2D.cpp.o CMakeFiles/RDGeometryLib.dir/Transform3D.cpp.o CMakeFiles/RDGeometryLib.dir/UniformGrid3D.cpp.o CMakeFiles/RDGeometryLib.dir/GridUtils.cpp.o ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1 ../../lib/libRDKitRDGeometryLib.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 10%] Built target RDGeometryLib
make -f Code/ML/Data/CMakeFiles/cQuantize.dir/build.make Code/ML/Data/CMakeFiles/cQuantize.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/Data /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/Data /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/Data/CMakeFiles/cQuantize.dir/DependInfo.cmake --color=
Scanning dependencies of target cQuantize
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ML/Data/CMakeFiles/cQuantize.dir/build.make Code/ML/Data/CMakeFiles/cQuantize.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 10%] Building CXX object Code/ML/Data/CMakeFiles/cQuantize.dir/cQuantize.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/Data && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DcQuantize_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/cQuantize.dir/cQuantize.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/Data/cQuantize.cpp
[ 10%] Building CXX object Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/HierarchicalClusterPicker.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSimDivPickers_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdSimDivPickers.dir/HierarchicalClusterPicker.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/Wrap/HierarchicalClusterPicker.cpp
[ 10%] Building CXX object Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/BitCorrMatGenerator.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdInfoTheory_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdInfoTheory.dir/BitCorrMatGenerator.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/InfoTheory/Wrap/BitCorrMatGenerator.cpp
[ 10%] Linking CXX shared module ../../../rdkit/ML/Data/cQuantize.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/Data && /usr/bin/cmake -E cmake_link_script CMakeFiles/cQuantize.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../rdkit/ML/Data/cQuantize.so CMakeFiles/cQuantize.dir/cQuantize.cpp.o ../../../lib/libRDKitInfoTheory.so.1.2018.09.1 ../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 10%] Built target cQuantize
[ 10%] Building CXX object Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/rdSimDivPickers.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSimDivPickers_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdSimDivPickers.dir/rdSimDivPickers.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/Wrap/rdSimDivPickers.cpp
[ 10%] Building CXX object Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/rdInfoTheory.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdInfoTheory_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdInfoTheory.dir/rdInfoTheory.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/InfoTheory/Wrap/rdInfoTheory.cpp
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/Wrap/SparseIntVect.cpp:18:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h: In function 'void {anonymous}::pyUpdateFromSequence(RDKit::SparseIntVect<IndexType>&, boost::python::api::object&) [with IndexType = long long int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       T res = python::extract<T>(d_seq[which]);
         ^~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h: In function 'void {anonymous}::pyUpdateFromSequence(RDKit::SparseIntVect<IndexType>&, boost::python::api::object&) [with IndexType = long long unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       T res = python::extract<T>(d_seq[which]);
         ^~~
[ 11%] Linking CXX shared module ../../../rdkit/SimDivFilters/rdSimDivPickers.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdSimDivPickers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../rdkit/SimDivFilters/rdSimDivPickers.so CMakeFiles/rdSimDivPickers.dir/MaxMinPicker.cpp.o CMakeFiles/rdSimDivPickers.dir/HierarchicalClusterPicker.cpp.o CMakeFiles/rdSimDivPickers.dir/rdSimDivPickers.cpp.o ../../../lib/libRDKitSimDivPickers.so.1.2018.09.1 ../../../lib/libRDKithc.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
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Scanning dependencies of target ChemicalFeatures
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[ 11%] Building CXX object Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/FreeChemicalFeature.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures && /usr/bin/c++  -DChemicalFeatures_EXPORTS -DRDKIT_CHEMICALFEATURES_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ChemicalFeatures.dir/FreeChemicalFeature.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ChemicalFeatures/FreeChemicalFeature.cpp
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cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/cDataStructs.dir/wrap_SparseBV.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/Wrap/wrap_SparseBV.cpp
[ 12%] Linking CXX shared module ../../../../rdkit/ML/InfoTheory/rdInfoTheory.so
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/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/ML/InfoTheory/rdInfoTheory.so CMakeFiles/rdInfoTheory.dir/InfoBitRanker.cpp.o CMakeFiles/rdInfoTheory.dir/BitCorrMatGenerator.cpp.o CMakeFiles/rdInfoTheory.dir/rdInfoTheory.cpp.o ../../../../lib/libRDKitInfoTheory.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
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[ 12%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_ExplicitBV.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/cDataStructs.dir/wrap_ExplicitBV.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/Wrap/wrap_ExplicitBV.cpp
[ 12%] Linking CXX shared library ../../lib/libRDKitChemicalFeatures.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures && /usr/bin/cmake -E cmake_link_script CMakeFiles/ChemicalFeatures.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitChemicalFeatures.so.1 -o ../../lib/libRDKitChemicalFeatures.so.1.2018.09.1 CMakeFiles/ChemicalFeatures.dir/FreeChemicalFeature.cpp.o ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitChemicalFeatures.so.1.2018.09.1 ../../lib/libRDKitChemicalFeatures.so.1 ../../lib/libRDKitChemicalFeatures.so
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[ 12%] Built target ChemicalFeatures
[ 13%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_BitOps.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/cDataStructs.dir/wrap_BitOps.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/Wrap/wrap_BitOps.cpp
make -f Code/Geometry/CMakeFiles/testTransforms.dir/build.make Code/Geometry/CMakeFiles/testTransforms.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/testTransforms.dir/DependInfo.cmake --color=
Scanning dependencies of target testTransforms
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Geometry/CMakeFiles/testTransforms.dir/build.make Code/Geometry/CMakeFiles/testTransforms.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 13%] Building CXX object Code/Geometry/CMakeFiles/testTransforms.dir/testTransforms.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testTransforms.dir/testTransforms.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/testTransforms.cpp
[ 13%] Linking CXX executable testTransforms
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/cmake -E cmake_link_script CMakeFiles/testTransforms.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testTransforms.dir/testTransforms.cpp.o  -o testTransforms ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make -f Code/Geometry/CMakeFiles/testGrid.dir/build.make Code/Geometry/CMakeFiles/testGrid.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/testGrid.dir/DependInfo.cmake --color=
Scanning dependencies of target testGrid
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Geometry/CMakeFiles/testGrid.dir/build.make Code/Geometry/CMakeFiles/testGrid.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 13%] Building CXX object Code/Geometry/CMakeFiles/testGrid.dir/testGrid.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_RDGEOMETRYLIB_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testGrid.dir/testGrid.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/testGrid.cpp
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 13%] Built target testTransforms
make -f Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build.make Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/DependInfo.cmake --color=
Scanning dependencies of target rdGeometry
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build.make Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 13%] Building CXX object Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/Point.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdGeometry_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdGeometry.dir/Point.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Wrap/Point.cpp
[ 14%] Building CXX object Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/UniformGrid3D.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdGeometry_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdGeometry.dir/UniformGrid3D.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Wrap/UniformGrid3D.cpp
[ 14%] Linking CXX executable testGrid
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry && /usr/bin/cmake -E cmake_link_script CMakeFiles/testGrid.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testGrid.dir/testGrid.cpp.o  -o testGrid ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 14%] Built target testGrid
make -f Code/Numerics/Alignment/CMakeFiles/Alignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/Alignment.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Alignment /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/CMakeFiles/Alignment.dir/DependInfo.cmake --color=
Scanning dependencies of target Alignment
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Numerics/Alignment/CMakeFiles/Alignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/Alignment.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 14%] Building CXX object Code/Numerics/Alignment/CMakeFiles/Alignment.dir/AlignPoints.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment && /usr/bin/c++  -DAlignment_EXPORTS -DRDKIT_ALIGNMENT_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Alignment.dir/AlignPoints.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Alignment/AlignPoints.cpp
[ 14%] Linking CXX shared library ../../../lib/libRDKitAlignment.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment && /usr/bin/cmake -E cmake_link_script CMakeFiles/Alignment.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitAlignment.so.1 -o ../../../lib/libRDKitAlignment.so.1.2018.09.1 CMakeFiles/Alignment.dir/AlignPoints.cpp.o ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitAlignment.so.1.2018.09.1 ../../../lib/libRDKitAlignment.so.1 ../../../lib/libRDKitAlignment.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 14%] Built target Alignment
[ 14%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_FPB.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/cDataStructs.dir/wrap_FPB.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/Wrap/wrap_FPB.cpp
make -f Code/GraphMol/CMakeFiles/GraphMol.dir/build.make Code/GraphMol/CMakeFiles/GraphMol.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/GraphMol.dir/DependInfo.cmake --color=
Scanning dependencies of target GraphMol
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/GraphMol.dir/build.make Code/GraphMol/CMakeFiles/GraphMol.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 14%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Atom.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/Atom.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.cpp
[ 14%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_Utils.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DcDataStructs_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/cDataStructs.dir/wrap_Utils.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/Wrap/wrap_Utils.cpp
[ 14%] Building CXX object Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/rdGeometry.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdGeometry_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdGeometry.dir/rdGeometry.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Wrap/rdGeometry.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.cpp:13:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
make -f Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ChemicalFeatures /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/DependInfo.cmake --color=
Scanning dependencies of target testChemicalFeatures
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 14%] Building CXX object Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/testChemicalFeatures.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures && /usr/bin/c++  -DRDKIT_CHEMICALFEATURES_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testChemicalFeatures.dir/testChemicalFeatures.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ChemicalFeatures/testChemicalFeatures.cpp
[ 14%] Linking CXX shared module ../../../rdkit/Geometry/rdGeometry.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdGeometry.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../rdkit/Geometry/rdGeometry.so CMakeFiles/rdGeometry.dir/Point.cpp.o CMakeFiles/rdGeometry.dir/UniformGrid3D.cpp.o CMakeFiles/rdGeometry.dir/rdGeometry.cpp.o ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 14%] Built target rdGeometry
make -f Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Alignment /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/DependInfo.cmake --color=
Scanning dependencies of target testAlignment
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 14%] Building CXX object Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/testAlignment.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment && /usr/bin/c++  -DRDKIT_ALIGNMENT_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testAlignment.dir/testAlignment.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Alignment/testAlignment.cpp
[ 14%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/QueryAtom.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/QueryAtom.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/QueryAtom.cpp
[ 14%] Linking CXX executable testChemicalFeatures
[ 14%] Linking CXX shared module ../../../rdkit/DataStructs/cDataStructs.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/cDataStructs.dir/link.txt --verbose=1
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures && /usr/bin/cmake -E cmake_link_script CMakeFiles/testChemicalFeatures.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testChemicalFeatures.dir/testChemicalFeatures.cpp.o  -o testChemicalFeatures ../../lib/libRDKitChemicalFeatures.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../rdkit/DataStructs/cDataStructs.so CMakeFiles/cDataStructs.dir/DataStructs.cpp.o CMakeFiles/cDataStructs.dir/DiscreteValueVect.cpp.o CMakeFiles/cDataStructs.dir/SparseIntVect.cpp.o CMakeFiles/cDataStructs.dir/wrap_SparseBV.cpp.o CMakeFiles/cDataStructs.dir/wrap_ExplicitBV.cpp.o CMakeFiles/cDataStructs.dir/wrap_BitOps.cpp.o CMakeFiles/cDataStructs.dir/wrap_FPB.cpp.o CMakeFiles/cDataStructs.dir/wrap_Utils.cpp.o ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 14%] Built target testChemicalFeatures
make -f Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build.make Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Alignment/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/DependInfo.cmake --color=
Scanning dependencies of target rdAlignment
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build.make Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 14%] Building CXX object Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/rdAlignment.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdAlignment_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdAlignment.dir/rdAlignment.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Alignment/Wrap/rdAlignment.cpp
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 14%] Built target cDataStructs
[ 14%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/QueryBond.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/QueryBond.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/QueryBond.cpp
[ 14%] Linking CXX executable testAlignment
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment && /usr/bin/cmake -E cmake_link_script CMakeFiles/testAlignment.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testAlignment.dir/testAlignment.cpp.o  -o testAlignment ../../../lib/libRDKitAlignment.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 14%] Built target testAlignment
[ 14%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Bond.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/Bond.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Bond.cpp
[ 14%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/MolOps.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/MolOps.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolOps.cpp
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Alignment/Wrap/rdAlignment.cpp:16:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h: In function 'void RDNumeric::Alignments::GetPointsFromPythonSequence(boost::python::api::object&, RDGeom::Point3DConstPtrVect&)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       T res = python::extract<T>(d_seq[which]);
         ^~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       T res = python::extract<T>(d_seq[which]);
         ^~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       T res = python::extract<T>(d_seq[which]);
         ^~~
[ 15%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/FindRings.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/FindRings.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FindRings.cpp
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h: In function 'PyObject* RDNumeric::Alignments::AlignPointPairs(boost::python::api::object, boost::python::api::object, boost::python::api::object, bool, unsigned int)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       T res = python::extract<T>(d_seq[which]);
         ^~~
[ 15%] Linking CXX shared module ../../../../rdkit/Numerics/rdAlignment.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdAlignment.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Numerics/rdAlignment.so CMakeFiles/rdAlignment.dir/rdAlignment.cpp.o ../../../../lib/libRDKitAlignment.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 15%] Built target rdAlignment
[ 15%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/ROMol.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/ROMol.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.cpp
[ 15%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/RWMol.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/RWMol.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RWMol.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/GraphMol.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolOps.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/GraphMol.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolOps.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/GraphMol.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolOps.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/GraphMol.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolOps.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In function 'std::map<T, boost::shared_ptr<RDKit::ROMol> > RDKit::MolOps::getMolFragsWithQuery(const RDKit::ROMol&, T (*)(const RDKit::ROMol&, const RDKit::Atom*), bool, const std::vector<T>*, bool) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FindRings.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In function 'std::map<T, boost::shared_ptr<RDKit::ROMol> > RDKit::MolOps::getMolFragsWithQuery(const RDKit::ROMol&, T (*)(const RDKit::ROMol&, const RDKit::Atom*), bool, const std::vector<T>*, bool) [with T = int]':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In function 'std::map<T, boost::shared_ptr<RDKit::ROMol> > RDKit::MolOps::getMolFragsWithQuery(const RDKit::ROMol&, T (*)(const RDKit::ROMol&, const RDKit::Atom*), bool, const std::vector<T>*, bool) [with T = unsigned int]':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/GraphMol.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolOps.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In function 'std::vector<boost::shared_ptr<RDKit::ROMol> > RDKit::MolOps::getMolFrags(const RDKit::ROMol&, bool, RDKit::INT_VECT*, RDKit::VECT_INT_VECT*, bool)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/GraphMol.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolOps.cpp:11:
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.cpp:17:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::vector<std::__cxx11::basic_string<char> >]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RWMol.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RWMol.cpp:16:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
[ 15%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/PeriodicTable.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/PeriodicTable.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PeriodicTable.cpp
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RWMol.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RWMol.cpp:16:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RWMol.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RWMol.cpp:16:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.cpp:17:
/usr/include/c++/8/bits/stl_vector.h: In member function 'unsigned int RDKit::ROMol::addAtom(RDKit::Atom*, bool, bool)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RWMol.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RWMol.cpp:16:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void RDKit::RWMol::insertMol(const RDKit::ROMol&)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 15%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/atomic_data.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/atomic_data.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/atomic_data.cpp
[ 15%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/QueryOps.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/QueryOps.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/QueryOps.cpp
/usr/include/c++/8/bits/stl_vector.h: In member function 'unsigned int RDKit::RWMol::addAtom(bool)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PeriodicTable.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PeriodicTable.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDKit::atomicData&}; _Tp = RDKit::atomicData; _Alloc = std::allocator<RDKit::atomicData>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::atomicData>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::atomicData*, std::vector<RDKit::atomicData> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PeriodicTable.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PeriodicTable.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::PeriodicTable::PeriodicTable()':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::atomicData*, std::vector<RDKit::atomicData> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
[ 16%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/MolPickler.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/MolPickler.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolPickler.cpp
[ 16%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Canon.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/Canon.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Canon.cpp
[ 16%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/AtomIterators.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/AtomIterators.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/AtomIterators.cpp
[ 16%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/BondIterators.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/BondIterators.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/BondIterators.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Canon.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolPickler.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolPickler.cpp:10:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolPickler.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 16%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Aromaticity.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/Aromaticity.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Aromaticity.cpp
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolPickler.cpp:10:
/usr/include/c++/8/bits/stl_vector.h: In static member function 'static void RDKit::MolPickler::_addAtomFromPickleV1(std::istream&, RDKit::ROMol*)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 16%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Kekulize.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/Kekulize.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Kekulize.cpp
[ 17%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/MolDiscriminators.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/MolDiscriminators.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDiscriminators.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Aromaticity.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 17%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/ConjugHybrid.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/ConjugHybrid.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ConjugHybrid.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolOps.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDiscriminators.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 17%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/AddHs.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/AddHs.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/AddHs.cpp
[ 17%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Matrices.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/Matrices.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Matrices.cpp
[ 17%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Chirality.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/Chirality.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Chirality.cpp
[ 17%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/RingInfo.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/RingInfo.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RingInfo.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Matrices.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 18%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Conformer.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/Conformer.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Conformer.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/AddHs.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:159:5: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/AddHs.cpp:10:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/AddHs.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 18%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Renumber.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/Renumber.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Renumber.cpp
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/AddHs.cpp:10:
/usr/include/c++/8/bits/stl_vector.h: In function 'void RDKit::MolOps::removeHs(RDKit::RWMol&, bool, bool, bool)':
/usr/include/c++/8/bits/stl_vector.h:1318:58: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
       { return _M_erase(begin() + (__position - cbegin())); }
                                                          ^
/usr/include/c++/8/bits/stl_vector.h: In function 'void RDKit::MolOps::addHs(RDKit::RWMol&, bool, bool, const UINT_VECT*, bool)':
/usr/include/c++/8/bits/stl_vector.h:1318:58: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
       { return _M_erase(begin() + (__position - cbegin())); }
                                                          ^
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Chirality.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:16,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Conformer.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Conformer.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDGeom::Point3D&}; _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
[ 18%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/AdjustQuery.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/AdjustQuery.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/AdjustQuery.cpp
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:16,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Conformer.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Conformer.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In copy constructor 'RDKit::Conformer::Conformer(const RDKit::Conformer&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
[ 18%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Resonance.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/Resonance.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Resonance.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/GraphMol.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Renumber.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/GraphMol.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Renumber.cpp:10:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/GraphMol.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Renumber.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/GraphMol.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Renumber.cpp:10:
/usr/include/c++/8/bits/stl_vector.h: In function 'RDKit::ROMol* RDKit::MolOps::renumberAtoms(const RDKit::ROMol&, const std::vector<unsigned int>&)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 18%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/StereoGroup.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/StereoGroup.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StereoGroup.cpp
[ 18%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/new_canon.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DGraphMol_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/GraphMol.dir/new_canon.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/new_canon.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Resonance.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'void RDKit::ResonanceUtils::fixExplicitImplicitHs(RDKit::ROMol&)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 19%] Linking CXX shared library ../../lib/libRDKitGraphMol.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/GraphMol.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitGraphMol.so.1 -o ../../lib/libRDKitGraphMol.so.1.2018.09.1 CMakeFiles/GraphMol.dir/Atom.cpp.o CMakeFiles/GraphMol.dir/QueryAtom.cpp.o CMakeFiles/GraphMol.dir/QueryBond.cpp.o CMakeFiles/GraphMol.dir/Bond.cpp.o CMakeFiles/GraphMol.dir/MolOps.cpp.o CMakeFiles/GraphMol.dir/FindRings.cpp.o CMakeFiles/GraphMol.dir/ROMol.cpp.o CMakeFiles/GraphMol.dir/RWMol.cpp.o CMakeFiles/GraphMol.dir/PeriodicTable.cpp.o CMakeFiles/GraphMol.dir/atomic_data.cpp.o CMakeFiles/GraphMol.dir/QueryOps.cpp.o CMakeFiles/GraphMol.dir/MolPickler.cpp.o CMakeFiles/GraphMol.dir/Canon.cpp.o CMakeFiles/GraphMol.dir/AtomIterators.cpp.o CMakeFiles/GraphMol.dir/BondIterators.cpp.o CMakeFiles/GraphMol.dir/Aromaticity.cpp.o CMakeFiles/GraphMol.dir/Kekulize.cpp.o CMakeFiles/GraphMol.dir/MolDiscriminators.cpp.o CMakeFiles/GraphMol.dir/ConjugHybrid.cpp.o CMakeFiles/GraphMol.dir/AddHs.cpp.o CMakeFiles/GraphMol.dir/Matrices.cpp.o CMakeFiles/GraphMol.dir/Chirality.cpp.o CMakeFiles/GraphMol.dir/RingInfo.cpp.o CMakeFiles/GraphMol.dir/Conformer.cpp.o CMakeFiles/GraphMol.dir/Renumber.cpp.o CMakeFiles/GraphMol.dir/AdjustQuery.cpp.o CMakeFiles/GraphMol.dir/Resonance.cpp.o CMakeFiles/GraphMol.dir/StereoGroup.cpp.o CMakeFiles/GraphMol.dir/new_canon.cpp.o ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1 ../../lib/libRDKitGraphMol.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 19%] Built target GraphMol
make -f Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/depend
make -f Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/DependInfo.cmake --color=
make -f Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Substruct /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/DependInfo.cmake --color=
make -f Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolTransforms /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/DependInfo.cmake --color=
Scanning dependencies of target Trajectory
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
Scanning dependencies of target SubstructMatch
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 19%] Building CXX object Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/Trajectory.cpp.o
Scanning dependencies of target MolTransforms
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/build
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_TRAJECTORY_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DTrajectory_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Trajectory.dir/Trajectory.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory/Trajectory.cpp
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
Scanning dependencies of target SmilesParse
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/build
[ 19%] Building CXX object Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/SubstructMatch.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBSTRUCTMATCH_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubstructMatch_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SubstructMatch.dir/SubstructMatch.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Substruct/SubstructMatch.cpp
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 19%] Building CXX object Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/MolTransforms.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms && /usr/bin/c++  -DMolTransforms_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLTRANSFORMS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolTransforms.dir/MolTransforms.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolTransforms/MolTransforms.cpp
[ 20%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmilesParse.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SmilesParse.dir/SmilesParse.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmilesParse.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/BadFileException.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory/Trajectory.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/BadFileException.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory/Trajectory.cpp:12:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/BadFileException.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory/Trajectory.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDKit::Snapshot&}; _Tp = RDKit::Snapshot; _Alloc = std::allocator<RDKit::Snapshot>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Snapshot>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::insert(std::vector<_Tp, _Alloc>::const_iterator, const value_type&) [with _Tp = RDKit::Snapshot; _Alloc = std::allocator<RDKit::Snapshot>]':
/usr/include/c++/8/bits/vector.tcc:118:5: note: parameter passing for argument of type 'std::vector<RDKit::Snapshot>::const_iterator' {aka '__gnu_cxx::__normal_iterator<const RDKit::Snapshot*, std::vector<RDKit::Snapshot> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:149:2: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
  _M_realloc_insert(begin() + (__position - cbegin()), __x);
  ^~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory/Trajectory.cpp: In member function 'unsigned int RDKit::Trajectory::insertSnapshot(unsigned int, RDKit::Snapshot)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory/Trajectory.cpp:73:74: note: parameter passing for argument of type 'std::vector<RDKit::Snapshot>::const_iterator' {aka '__gnu_cxx::__normal_iterator<const RDKit::Snapshot*, std::vector<RDKit::Snapshot> >'} changed in GCC 7.1
   return (d_snapshotVect->insert(d_snapshotVect->begin() + snapshotNum, s) -
                                                                          ^
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RWMol.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmilesParse.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmilesParse.cpp:26:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/BadFileException.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory/Trajectory.cpp:12:
/usr/include/c++/8/bits/stl_vector.h: In member function 'unsigned int RDKit::Trajectory::addConformersToMol(RDKit::ROMol&, int, int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 21%] Linking CXX shared library ../../../lib/libRDKitTrajectory.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory && /usr/bin/cmake -E cmake_link_script CMakeFiles/Trajectory.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitTrajectory.so.1 -o ../../../lib/libRDKitTrajectory.so.1.2018.09.1 CMakeFiles/Trajectory.dir/Trajectory.cpp.o ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../lib/libRDKitTrajectory.so.1 ../../../lib/libRDKitTrajectory.so
/usr/include/c++/8/bits/vector.tcc: In function 'RDKit::RWMol* RDKit::SmilesToMol(const string&, const RDKit::SmilesParserParams&)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 21%] Built target Trajectory
make -f Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/DependInfo.cmake --color=
Scanning dependencies of target Subgraphs
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 21%] Building CXX object Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/Subgraphs.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBGRAPHS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubgraphs_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Subgraphs.dir/Subgraphs.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs/Subgraphs.cpp
[ 21%] Linking CXX shared library ../../../lib/libRDKitMolTransforms.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolTransforms.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitMolTransforms.so.1 -o ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 CMakeFiles/MolTransforms.dir/MolTransforms.cpp.o ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1 ../../../lib/libRDKitMolTransforms.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 21%] Built target MolTransforms
make -f Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PartialCharges /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/DependInfo.cmake --color=
Scanning dependencies of target PartialCharges
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 21%] Building CXX object Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/GasteigerCharges.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges && /usr/bin/c++  -DPartialCharges_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_PARTIALCHARGES_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/PartialCharges.dir/GasteigerCharges.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PartialCharges/GasteigerCharges.cpp
[ 21%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmilesParseOps.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SmilesParse.dir/SmilesParseOps.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmilesParseOps.cpp
[ 21%] Building CXX object Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/SubstructUtils.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBSTRUCTMATCH_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubstructMatch_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SubstructMatch.dir/SubstructUtils.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Substruct/SubstructUtils.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PartialCharges/GasteigerCharges.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PartialCharges/GasteigerCharges.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PartialCharges/GasteigerCharges.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PartialCharges/GasteigerCharges.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In function 'void RDKit::computeGasteigerCharges(const RDKit::ROMol&, std::vector<double>&, int, bool)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 21%] Building CXX object Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/GasteigerParams.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges && /usr/bin/c++  -DPartialCharges_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_PARTIALCHARGES_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/PartialCharges.dir/GasteigerParams.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PartialCharges/GasteigerParams.cpp
[ 21%] Building CXX object Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/SubgraphUtils.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBGRAPHS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubgraphs_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Subgraphs.dir/SubgraphUtils.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs/SubgraphUtils.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmilesParseOps.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 21%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmilesWrite.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SmilesParse.dir/SmilesWrite.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmilesWrite.cpp
[ 21%] Linking CXX shared library ../../../lib/libRDKitSubstructMatch.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/cmake -E cmake_link_script CMakeFiles/SubstructMatch.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitSubstructMatch.so.1 -o ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 CMakeFiles/SubstructMatch.dir/SubstructMatch.cpp.o CMakeFiles/SubstructMatch.dir/SubstructUtils.cpp.o ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1 ../../../lib/libRDKitSubstructMatch.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 21%] Built target SubstructMatch
make -f Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build.make Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolTransforms/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMolTransforms
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build.make Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 21%] Building CXX object Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/rdMolTransforms.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolTransforms_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMolTransforms.dir/rdMolTransforms.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolTransforms/Wrap/rdMolTransforms.cpp
[ 21%] Linking CXX shared library ../../../lib/libRDKitPartialCharges.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges && /usr/bin/cmake -E cmake_link_script CMakeFiles/PartialCharges.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitPartialCharges.so.1 -o ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 CMakeFiles/PartialCharges.dir/GasteigerCharges.cpp.o CMakeFiles/PartialCharges.dir/GasteigerParams.cpp.o ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1 ../../../lib/libRDKitPartialCharges.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 21%] Built target PartialCharges
make -f Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/DependInfo.cmake --color=
Scanning dependencies of target ShapeHelpers
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 21%] Building CXX object Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/ShapeEncoder.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SHAPEHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DShapeHelpers_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ShapeHelpers.dir/ShapeEncoder.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers/ShapeEncoder.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs/Subgraphs.h:32,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs/SubgraphUtils.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs/SubgraphUtils.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs/Subgraphs.h:32,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs/SubgraphUtils.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs/SubgraphUtils.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In function 'RDKit::ROMol* RDKit::Subgraphs::pathToSubmol(const RDKit::ROMol&, const PATH_TYPE&, bool, RDKit::INT_MAP_INT&)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 21%] Linking CXX shared library ../../../lib/libRDKitSubgraphs.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/cmake -E cmake_link_script CMakeFiles/Subgraphs.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitSubgraphs.so.1 -o ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 CMakeFiles/Subgraphs.dir/Subgraphs.cpp.o CMakeFiles/Subgraphs.dir/SubgraphUtils.cpp.o ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1 ../../../lib/libRDKitSubgraphs.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 21%] Built target Subgraphs
make -f Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/DependInfo.cmake --color=
Scanning dependencies of target MolCatalog
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 21%] Building CXX object Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/MolCatalogEntry.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog && /usr/bin/c++  -DMolCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolCatalog.dir/MolCatalogEntry.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolCatalog/MolCatalogEntry.cpp
[ 22%] Building CXX object Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/ShapeUtils.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SHAPEHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DShapeHelpers_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ShapeHelpers.dir/ShapeUtils.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers/ShapeUtils.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmilesWrite.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmilesWrite.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 22%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmartsWrite.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SmilesParse.dir/SmartsWrite.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmartsWrite.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers/ShapeUtils.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers/ShapeUtils.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers/ShapeUtils.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers/ShapeUtils.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In function 'std::vector<double> RDKit::MolShapes::getConfDimensions(const RDKit::Conformer&, double, const RDGeom::Point3D*, bool)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
[ 22%] Building CXX object Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/MolCatalogParams.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog && /usr/bin/c++  -DMolCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolCatalog.dir/MolCatalogParams.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolCatalog/MolCatalogParams.cpp
[ 22%] Linking CXX shared library ../../../lib/libRDKitShapeHelpers.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/ShapeHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitShapeHelpers.so.1 -o ../../../lib/libRDKitShapeHelpers.so.1.2018.09.1 CMakeFiles/ShapeHelpers.dir/ShapeEncoder.cpp.o CMakeFiles/ShapeHelpers.dir/ShapeUtils.cpp.o ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitShapeHelpers.so.1.2018.09.1 ../../../lib/libRDKitShapeHelpers.so.1 ../../../lib/libRDKitShapeHelpers.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 22%] Built target ShapeHelpers
make -f Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/DependInfo.cmake --color=
Scanning dependencies of target SLNParse
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 23%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/SLNParse.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SLNPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSLNParse_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SLNParse.dir/SLNParse.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse/SLNParse.cpp
[ 23%] Linking CXX shared module ../../../../rdkit/Chem/rdMolTransforms.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolTransforms.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdMolTransforms.so CMakeFiles/rdMolTransforms.dir/rdMolTransforms.cpp.o ../../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 23%] Built target rdMolTransforms
[ 23%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/SLNAttribs.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SLNPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSLNParse_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SLNParse.dir/SLNAttribs.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse/SLNAttribs.cpp
[ 23%] Linking CXX shared library ../../../lib/libRDKitMolCatalog.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolCatalog.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitMolCatalog.so.1 -o ../../../lib/libRDKitMolCatalog.so.1.2018.09.1 CMakeFiles/MolCatalog.dir/MolCatalogEntry.cpp.o CMakeFiles/MolCatalog.dir/MolCatalogParams.cpp.o ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolCatalog.so.1.2018.09.1 ../../../lib/libRDKitMolCatalog.so.1 ../../../lib/libRDKitMolCatalog.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 23%] Built target MolCatalog
make -f Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/DependInfo.cmake --color=
Scanning dependencies of target rdtrajectory
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 23%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/Trajectory.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdtrajectory_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdtrajectory.dir/Trajectory.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/Trajectory.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function.hpp:30,
                 from /usr/include/boost/algorithm/string/detail/find_iterator.hpp:18,
                 from /usr/include/boost/algorithm/string/find_iterator.hpp:24,
                 from /usr/include/boost/algorithm/string/iter_find.hpp:27,
                 from /usr/include/boost/algorithm/string/split.hpp:16,
                 from /usr/include/boost/algorithm/string.hpp:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmartsWrite.cpp:13:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void RDKit::Dict::setPODVal(const string&, T) [with T = int]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse/SLNParse.cpp:35:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse/SLNAttribs.h:39,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse/SLNAttribs.cpp:37:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'void RDKit::SLNParse::finalizeQueryMol(RDKit::ROMol*, bool)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 23%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/CXSmilesOps.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SmilesParse.dir/CXSmilesOps.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/CXSmilesOps.cpp
[ 23%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/sln.tab.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SLNPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSLNParse_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SLNParse.dir/sln.tab.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse/sln.tab.cpp
[ 23%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/rdTrajectory.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdtrajectory_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdtrajectory.dir/rdTrajectory.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/rdTrajectory.cpp
[ 23%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/lex.yysln.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SLNPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSLNParse_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SLNParse.dir/lex.yysln.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse/lex.yysln.cpp
sln.yy: In function 'void yysln_error(const char*, std::vector<RDKit::RWMol*>*, bool, void*, const char*)':
sln.yy:60:43: warning: unused parameter 'ms' [-Wunused-parameter]
sln.yy:60:51: warning: unused parameter 'doQ' [-Wunused-parameter]
sln.yy:61:13: warning: unused parameter 'scanner' [-Wunused-parameter]
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function.hpp:30,
                 from /usr/include/boost/algorithm/string/detail/find_iterator.hpp:18,
                 from /usr/include/boost/algorithm/string/find_iterator.hpp:24,
                 from /usr/include/boost/algorithm/string/iter_find.hpp:27,
                 from /usr/include/boost/algorithm/string/split.hpp:16,
                 from /usr/include/boost/algorithm/string.hpp:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/CXSmilesOps.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function.hpp:30,
                 from /usr/include/boost/algorithm/string/detail/find_iterator.hpp:18,
                 from /usr/include/boost/algorithm/string/find_iterator.hpp:24,
                 from /usr/include/boost/algorithm/string/iter_find.hpp:27,
                 from /usr/include/boost/algorithm/string/split.hpp:16,
                 from /usr/include/boost/algorithm/string.hpp:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/CXSmilesOps.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function.hpp:30,
                 from /usr/include/boost/algorithm/string/detail/find_iterator.hpp:18,
                 from /usr/include/boost/algorithm/string/find_iterator.hpp:24,
                 from /usr/include/boost/algorithm/string/iter_find.hpp:27,
                 from /usr/include/boost/algorithm/string/split.hpp:16,
                 from /usr/include/boost/algorithm/string.hpp:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/CXSmilesOps.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/Users/landrgr1/RDKit_git/Code/GraphMol/SLNParse/lex.yysln.cpp: In function 'void yy_fatal_error(const char*, yyscan_t)':
/Users/landrgr1/RDKit_git/Code/GraphMol/SLNParse/lex.yysln.cpp:2585:58: warning: unused parameter 'yyscanner' [-Wunused-parameter]
/Users/landrgr1/RDKit_git/Code/GraphMol/SLNParse/lex.yysln.cpp: In function 'void* yysln_alloc(yy_size_t, yyscan_t)':
/Users/landrgr1/RDKit_git/Code/GraphMol/SLNParse/lex.yysln.cpp:2917:47: warning: unused parameter 'yyscanner' [-Wunused-parameter]
/Users/landrgr1/RDKit_git/Code/GraphMol/SLNParse/lex.yysln.cpp: In function 'void* yysln_realloc(void*, yy_size_t, yyscan_t)':
/Users/landrgr1/RDKit_git/Code/GraphMol/SLNParse/lex.yysln.cpp:2922:62: warning: unused parameter 'yyscanner' [-Wunused-parameter]
/Users/landrgr1/RDKit_git/Code/GraphMol/SLNParse/lex.yysln.cpp: In function 'void yysln_free(void*, yyscan_t)':
/Users/landrgr1/RDKit_git/Code/GraphMol/SLNParse/lex.yysln.cpp:2934:40: warning: unused parameter 'yyscanner' [-Wunused-parameter]
In file included from /usr/include/c++/8/vector:69,
                 from sln.yy:43:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function.hpp:30,
                 from /usr/include/boost/algorithm/string/detail/find_iterator.hpp:18,
                 from /usr/include/boost/algorithm/string/find_iterator.hpp:24,
                 from /usr/include/boost/algorithm/string/iter_find.hpp:27,
                 from /usr/include/boost/algorithm/string/split.hpp:16,
                 from /usr/include/boost/algorithm/string.hpp:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/CXSmilesOps.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In function 'bool SmilesParseOps::parser::parse_coords(Iterator&, Iterator, RDKit::RWMol&) [with Iterator = __gnu_cxx::__normal_iterator<const char*, std::__cxx11::basic_string<char> >]':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 23%] Linking CXX shared module ../../../rdkit/Chem/rdtrajectory.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdtrajectory.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../rdkit/Chem/rdtrajectory.so CMakeFiles/rdtrajectory.dir/Trajectory.cpp.o CMakeFiles/rdtrajectory.dir/rdTrajectory.cpp.o ../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 23%] Built target rdtrajectory
make -f Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/DependInfo.cmake --color=
Scanning dependencies of target rdqueries
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 23%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/rdqueries.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdqueries_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdqueries.dir/rdqueries.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/rdqueries.cpp
[ 23%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/smarts.tab.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SmilesParse.dir/smarts.tab.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/smarts.tab.cpp
[ 24%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/smiles.tab.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SmilesParse.dir/smiles.tab.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/smiles.tab.cpp
[ 24%] Linking CXX shared library ../../../lib/libRDKitSLNParse.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/SLNParse.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitSLNParse.so.1 -o ../../../lib/libRDKitSLNParse.so.1.2018.09.1 CMakeFiles/SLNParse.dir/SLNParse.cpp.o CMakeFiles/SLNParse.dir/SLNAttribs.cpp.o CMakeFiles/SLNParse.dir/sln.tab.cpp.o CMakeFiles/SLNParse.dir/lex.yysln.cpp.o ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitSLNParse.so.1.2018.09.1 ../../../lib/libRDKitSLNParse.so.1 ../../../lib/libRDKitSLNParse.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 24%] Built target SLNParse
make -f Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build.make Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ChemicalFeatures/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/DependInfo.cmake --color=
Scanning dependencies of target rdChemicalFeatures
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build.make Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 24%] Building CXX object Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/rdChemicalFeatures.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdChemicalFeatures_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdChemicalFeatures.dir/rdChemicalFeatures.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ChemicalFeatures/Wrap/rdChemicalFeatures.cpp
smarts.yy: In function 'void yysmarts_error(const char*, std::vector<RDKit::RWMol*>*, RDKit::Atom*&, RDKit::Bond*&, void*, int, const char*)':
smarts.yy:24:29: warning: unused parameter 'input' [-Wunused-parameter]
smarts.yy:25:46: warning: unused parameter 'ms' [-Wunused-parameter]
smarts.yy:26:31: warning: unused parameter 'lastAtom' [-Wunused-parameter]
smarts.yy:27:31: warning: unused parameter 'lastBond' [-Wunused-parameter]
smarts.yy:28:9: warning: unused parameter 'scanner' [-Wunused-parameter]
smarts.yy:28:21: warning: unused parameter 'start_token' [-Wunused-parameter]
smiles.yy: In function 'void yysmiles_error(const char*, std::vector<RDKit::RWMol*>*, RDKit::Atom*&, RDKit::Bond*&, std::__cxx11::list<unsigned int>*, void*, int, const char*)':
smiles.yy:38:29: warning: unused parameter 'input' [-Wunused-parameter]
smiles.yy:40:31: warning: unused parameter 'lastAtom' [-Wunused-parameter]
smiles.yy:41:31: warning: unused parameter 'lastBond' [-Wunused-parameter]
smiles.yy:42:42: warning: unused parameter 'branchPoints' [-Wunused-parameter]
smiles.yy:43:9: warning: unused parameter 'scanner' [-Wunused-parameter]
smiles.yy:43:21: warning: unused parameter 'start_token' [-Wunused-parameter]
smiles.yy: In function 'void yysmiles_error(const char*, std::vector<RDKit::RWMol*>*, std::__cxx11::list<unsigned int>*, void*, int, const char*)':
smiles.yy:50:29: warning: unused parameter 'input' [-Wunused-parameter]
smiles.yy:52:42: warning: unused parameter 'branchPoints' [-Wunused-parameter]
smiles.yy:53:9: warning: unused parameter 'scanner' [-Wunused-parameter]
smiles.yy:53:21: warning: unused parameter 'start_token' [-Wunused-parameter]
In file included from /usr/include/c++/8/vector:69,
                 from smiles.yy:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 24%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/Queries.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdqueries_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdqueries.dir/Queries.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/Queries.cpp
In file included from /usr/include/c++/8/vector:69,
                 from smarts.yy:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 24%] Building CXX object Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/FreeChemicalFeature.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdChemicalFeatures_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdChemicalFeatures.dir/FreeChemicalFeature.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ChemicalFeatures/Wrap/FreeChemicalFeature.cpp
[ 24%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/lex.yysmarts.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SmilesParse.dir/lex.yysmarts.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/lex.yysmarts.cpp
[ 24%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/lex.yysmiles.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSmilesParse_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SmilesParse.dir/lex.yysmiles.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/lex.yysmiles.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from smiles.ll:25:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'int yysmiles_lex(YYSTYPE*, yyscan_t, int&)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 24%] Linking CXX shared library ../../../lib/libRDKitSmilesParse.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/SmilesParse.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitSmilesParse.so.1 -o ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 CMakeFiles/SmilesParse.dir/SmilesParse.cpp.o CMakeFiles/SmilesParse.dir/SmilesParseOps.cpp.o CMakeFiles/SmilesParse.dir/SmilesWrite.cpp.o CMakeFiles/SmilesParse.dir/SmartsWrite.cpp.o CMakeFiles/SmilesParse.dir/CXSmilesOps.cpp.o CMakeFiles/SmilesParse.dir/smarts.tab.cpp.o CMakeFiles/SmilesParse.dir/smiles.tab.cpp.o CMakeFiles/SmilesParse.dir/lex.yysmarts.cpp.o CMakeFiles/SmilesParse.dir/lex.yysmiles.cpp.o ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1 ../../../lib/libRDKitSmilesParse.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 24%] Built target SmilesParse
make -f Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/depend
make -f Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Optimizer /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/DependInfo.cmake --color=
Scanning dependencies of target Optimizer
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
Scanning dependencies of target Depictor
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 24%] Building CXX object Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/BFGSOpt.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer && /usr/bin/c++  -DOptimizer_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_OPTIMIZER_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Optimizer.dir/BFGSOpt.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Optimizer/BFGSOpt.cpp
[ 24%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/RDDepictor.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/c++  -DDepictor_EXPORTS -DRDKIT_DEPICTOR_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Depictor.dir/RDDepictor.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/RDDepictor.cpp
[ 24%] Linking CXX shared module ../../../rdkit/Chem/rdChemicalFeatures.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdChemicalFeatures.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../rdkit/Chem/rdChemicalFeatures.so CMakeFiles/rdChemicalFeatures.dir/rdChemicalFeatures.cpp.o CMakeFiles/rdChemicalFeatures.dir/FreeChemicalFeature.cpp.o ../../../lib/libRDKitChemicalFeatures.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 24%] Built target rdChemicalFeatures
make -f Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/DependInfo.cmake --color=
Scanning dependencies of target graphmolqueryTest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 24%] Building CXX object Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/querytest.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/graphmolqueryTest.dir/querytest.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/querytest.cpp
[ 24%] Building CXX object Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/LinearSearch.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer && /usr/bin/c++  -DOptimizer_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_OPTIMIZER_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Optimizer.dir/LinearSearch.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Optimizer/LinearSearch.cpp
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/RDDepictor.cpp: In function 'unsigned int RDDepict::compute2DCoords(RDKit::ROMol&, const INT_POINT2D_MAP*, bool, bool, unsigned int, unsigned int, int, bool, bool)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/RDDepictor.cpp:310:58: warning: unused parameter 'forceRDKit' [-Wunused-parameter]
                              bool permuteDeg4Nodes, bool forceRDKit) {
                                                     ~~~~~^~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/RDDepictor.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/RDDepictor.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/RDDepictor.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/RDDepictor.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In function 'unsigned int RDDepict::copyCoordinate(RDKit::ROMol&, std::__cxx11::list<RDDepict::EmbeddedFrag>&, bool)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In function 'unsigned int RDDepict::compute2DCoords(RDKit::ROMol&, const INT_POINT2D_MAP*, bool, bool, unsigned int, unsigned int, int, bool, bool)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 25%] Linking CXX shared library ../../../lib/libRDKitOptimizer.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer && /usr/bin/cmake -E cmake_link_script CMakeFiles/Optimizer.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitOptimizer.so.1 -o ../../../lib/libRDKitOptimizer.so.1.2018.09.1 CMakeFiles/Optimizer.dir/BFGSOpt.cpp.o CMakeFiles/Optimizer.dir/LinearSearch.cpp.o ../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../lib/libRDKitOptimizer.so.1 ../../../lib/libRDKitOptimizer.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 25%] Built target Optimizer
make -f Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolcpTest.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolcpTest.dir/DependInfo.cmake --color=
Scanning dependencies of target graphmolcpTest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 26%] Building CXX object Code/GraphMol/CMakeFiles/graphmolcpTest.dir/cptest.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/graphmolcpTest.dir/cptest.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/cptest.cpp
[ 27%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/EmbeddedFrag.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/c++  -DDepictor_EXPORTS -DRDKIT_DEPICTOR_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Depictor.dir/EmbeddedFrag.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/EmbeddedFrag.cpp
[ 28%] Linking CXX shared module ../../../rdkit/Chem/rdqueries.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdqueries.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../rdkit/Chem/rdqueries.so CMakeFiles/rdqueries.dir/rdqueries.cpp.o CMakeFiles/rdqueries.dir/Queries.cpp.o ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/querytest.cpp:13:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 28%] Built target rdqueries
make -f Code/GraphMol/CMakeFiles/graphmoltestCanon.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestCanon.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestCanon.dir/DependInfo.cmake --color=
Scanning dependencies of target graphmoltestCanon
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmoltestCanon.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestCanon.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 28%] Building CXX object Code/GraphMol/CMakeFiles/graphmoltestCanon.dir/testCanon.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/graphmoltestCanon.dir/testCanon.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/testCanon.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/cptest.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/cptest.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/testCanon.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
[ 28%] Linking CXX executable graphmolqueryTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolqueryTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/graphmolqueryTest.dir/querytest.cpp.o  -o graphmolqueryTest ../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
/usr/include/c++/8/bits/vector.tcc: In function 'void permuteAtoms(RDKit::RWMol*)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 28%] Built target graphmolqueryTest
make -f Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/DependInfo.cmake --color=
Scanning dependencies of target graphmolMemTest1
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 28%] Building CXX object Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/memtest1.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/graphmolMemTest1.dir/memtest1.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/memtest1.cpp
[ 28%] Linking CXX executable graphmolcpTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolcpTest.dir/link.txt --verbose=1
In file included from /usr/include/c++/8/map:60,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/EmbeddedFrag.cpp:10:
/usr/include/c++/8/bits/stl_tree.h: In member function 'std::pair<std::_Rb_tree_node_base*, std::_Rb_tree_node_base*> std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_get_insert_hint_unique_pos(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, const key_type&) [with _Key = unsigned int; _Val = std::pair<const unsigned int, RDDepict::EmbeddedAtom>; _KeyOfValue = std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]':
/usr/include/c++/8/bits/stl_tree.h:2146:5: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/graphmolcpTest.dir/cptest.cpp.o  -o graphmolcpTest ../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
/usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const unsigned int&>, std::tuple<>}; _Key = unsigned int; _Val = std::pair<const unsigned int, RDDepict::EmbeddedAtom>; _KeyOfValue = std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:61,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/EmbeddedFrag.cpp:10:
/usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](const key_type&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 28%] Built target graphmolcpTest
make -f Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolIterTest.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolIterTest.dir/DependInfo.cmake --color=
Scanning dependencies of target graphmolIterTest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 28%] Building CXX object Code/GraphMol/CMakeFiles/graphmolIterTest.dir/itertest.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/graphmolIterTest.dir/itertest.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/itertest.cpp
/usr/include/c++/8/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::reflectIfNecessaryThirdPt(RDDepict::EmbeddedFrag&, unsigned int, unsigned int, unsigned int)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In member function 'RDGeom::Transform2D RDDepict::EmbeddedFrag::computeTwoAtomTrans(unsigned int, unsigned int, const INT_POINT2D_MAP&)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::reflectIfNecessaryDensity(RDDepict::EmbeddedFrag&, unsigned int, unsigned int)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::updateNewNeighs(unsigned int)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::openAngles(const double*, unsigned int, unsigned int)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In constructor 'RDDepict::EmbeddedFrag::EmbeddedFrag(unsigned int, const RDKit::ROMol*)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/8/map:60,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/EmbeddedFrag.cpp:10:
/usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<unsigned int&&>, std::tuple<>}; _Key = unsigned int; _Val = std::pair<const unsigned int, RDDepict::EmbeddedAtom>; _KeyOfValue = std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:61,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/EmbeddedFrag.cpp:10:
/usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](std::map<_Key, _Tp, _Compare, _Alloc>::key_type&&) [with _Key = unsigned int; _Tp = RDDepict::EmbeddedAtom; _Compare = std::less<unsigned int>; _Alloc = std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >]':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 28%] Linking CXX executable graphmoltestCanon
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmoltestCanon.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/graphmoltestCanon.dir/testCanon.cpp.o  -o graphmoltestCanon ../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
/usr/include/c++/8/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::addAtomToAtomWithAng(unsigned int, unsigned int)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 28%] Built target graphmoltestCanon
make -f Code/GraphMol/CMakeFiles/test-valgrind.dir/build.make Code/GraphMol/CMakeFiles/test-valgrind.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/test-valgrind.dir/DependInfo.cmake --color=
Scanning dependencies of target test-valgrind
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/test-valgrind.dir/build.make Code/GraphMol/CMakeFiles/test-valgrind.dir/build
/usr/include/c++/8/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::permuteBonds(unsigned int, unsigned int, unsigned int)':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 29%] Building CXX object Code/GraphMol/CMakeFiles/test-valgrind.dir/test-valgrind.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/test-valgrind.dir/test-valgrind.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/test-valgrind.cpp
/usr/include/c++/8/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::initFromRingCoords(const INT_VECT&, const INT_POINT2D_MAP&)':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::flipAboutBond(unsigned int, bool)':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::computeNbrsAndAng(unsigned int, const INT_VECT&)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::reflectIfNecessaryCisTrans(RDDepict::EmbeddedFrag&, unsigned int, unsigned int, unsigned int)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::mergeRing(const RDDepict::EmbeddedFrag&, unsigned int, const INT_VECT&)':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In constructor 'RDDepict::EmbeddedFrag::EmbeddedFrag(const RDKit::ROMol*, const INT_POINT2D_MAP&)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In member function 'RDGeom::Transform2D RDDepict::EmbeddedFrag::computeOneAtomTrans(unsigned int, const RDDepict::EmbeddedFrag&)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::mergeFragsWithComm(std::__cxx11::list<RDDepict::EmbeddedFrag>&)':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::expandEfrag(RDKit::INT_LIST&, std::__cxx11::list<RDDepict::EmbeddedFrag>&)':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::removeCollisionsShortenBonds()':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In member function 'void RDDepict::EmbeddedFrag::randomSampleFlipsAndPermutations(unsigned int, unsigned int, int, const DOUBLE_SMART_PTR*, double, bool)':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<unsigned int, std::pair<const unsigned int, RDDepict::EmbeddedAtom>, std::_Select1st<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >, std::less<unsigned int>, std::allocator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const unsigned int, RDDepict::EmbeddedAtom> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 29%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/DepictUtils.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/c++  -DDepictor_EXPORTS -DRDKIT_DEPICTOR_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Depictor.dir/DepictUtils.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/DepictUtils.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/memtest1.cpp:13:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 29%] Linking CXX executable graphmolMemTest1
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolMemTest1.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/graphmolMemTest1.dir/memtest1.cpp.o  -o graphmolMemTest1 ../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 29%] Built target graphmolMemTest1
make -f Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/DependInfo.cmake --color=
Scanning dependencies of target ChemTransforms
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 29%] Building CXX object Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/ChemTransforms.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/c++  -DChemTransforms_EXPORTS -DRDKIT_CHEMTRANSFORMS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ChemTransforms.dir/ChemTransforms.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/ChemTransforms.cpp
[ 29%] Linking CXX executable test-valgrind
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/test-valgrind.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/test-valgrind.dir/test-valgrind.cpp.o  -o test-valgrind ../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 29%] Built target test-valgrind
make -f Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/DependInfo.cmake --color=
Scanning dependencies of target smaTest1
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 29%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/smatest.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/smaTest1.dir/smatest.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/smatest.cpp
[ 29%] Linking CXX executable graphmolIterTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolIterTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/graphmolIterTest.dir/itertest.cpp.o  -o graphmolIterTest ../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 29%] Built target graphmolIterTest
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/DependInfo.cmake --color=
Scanning dependencies of target smiTest2
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 30%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/test2.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/smiTest2.dir/test2.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/test2.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/DepictUtils.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDGeom::Point2D&}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point2D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/DepictUtils.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In function 'RDDepict::INT_PAIR_VECT RDDepict::findBondsPairsToPermuteDeg4(const RDGeom::Point2D&, const INT_VECT&, const VECT_C_POINT&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
[ 30%] Linking CXX shared library ../../../lib/libRDKitDepictor.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/cmake -E cmake_link_script CMakeFiles/Depictor.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitDepictor.so.1 -o ../../../lib/libRDKitDepictor.so.1.2018.09.1 CMakeFiles/Depictor.dir/RDDepictor.cpp.o CMakeFiles/Depictor.dir/EmbeddedFrag.cpp.o CMakeFiles/Depictor.dir/DepictUtils.cpp.o ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1 ../../../lib/libRDKitDepictor.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 30%] Built target Depictor
make -f Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/DependInfo.cmake --color=
Scanning dependencies of target FilterCatalog
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 30%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/Filters.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++  -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FilterCatalog.dir/Filters.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/Filters.cpp
[ 30%] Linking CXX executable smiTest2
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/smiTest2.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/smiTest2.dir/test2.cpp.o  -o smiTest2 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 30%] Built target smiTest2
[ 31%] Building CXX object Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/MolFragmenter.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/c++  -DChemTransforms_EXPORTS -DRDKIT_CHEMTRANSFORMS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ChemTransforms.dir/MolFragmenter.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/MolFragmenter.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/ChemTransforms.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/ChemTransforms.cpp:10:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In function 'void RDKit::{anonymous}::updateSubMolConfs(const RDKit::ROMol&, RDKit::RWMol&, boost::dynamic_bitset<>&)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In function 'RDKit::ROMol* RDKit::combineMols(const RDKit::ROMol&, const RDKit::ROMol&, RDGeom::Point3D)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In function 'RDKit::ROMol* RDKit::replaceCore(const RDKit::ROMol&, const RDKit::ROMol&, const MatchVectType&, bool, bool, bool)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 31%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FilterCatalog.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++  -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FilterCatalog.dir/FilterCatalog.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterCatalog.cpp
[ 31%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FilterCatalogEntry.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++  -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FilterCatalog.dir/FilterCatalogEntry.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterCatalogEntry.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/MolFragmenter.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/MolFragmenter.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/MolFragmenter.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/MolFragmenter.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In function 'RDKit::ROMol* RDKit::MolFragmenter::fragmentOnBonds(const RDKit::ROMol&, const std::vector<unsigned int>&, bool, const std::vector<std::pair<unsigned int, unsigned int> >*, const std::vector<RDKit::Bond::BondType>*, std::vector<unsigned int>*)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 31%] Linking CXX shared library ../../../lib/libRDKitChemTransforms.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/cmake -E cmake_link_script CMakeFiles/ChemTransforms.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitChemTransforms.so.1 -o ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 CMakeFiles/ChemTransforms.dir/ChemTransforms.cpp.o CMakeFiles/ChemTransforms.dir/MolFragmenter.cpp.o ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1 ../../../lib/libRDKitChemTransforms.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 31%] Built target ChemTransforms
make -f Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/DependInfo.cmake --color=
Scanning dependencies of target Fingerprints
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 31%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/Fingerprints.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Fingerprints.dir/Fingerprints.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Fingerprints.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterCatalogEntry.h:36,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/Filters.h:36,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterCatalogEntry.cpp:32:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs/Catalog.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterCatalog.h:36,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterCatalog.cpp:32:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
[ 31%] Linking CXX executable smaTest1
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/smaTest1.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/smaTest1.dir/smatest.cpp.o  -o smaTest1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 31%] Built target smaTest1
[ 31%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/PatternFingerprints.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Fingerprints.dir/PatternFingerprints.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/PatternFingerprints.cpp
/usr/include/c++/8/bits/vector.tcc: In member function 'void boost::archive::detail::iserializer<Archive, T>::load_object_data(boost::archive::detail::basic_iarchive&, void*, unsigned int) const [with Archive = boost::archive::text_iarchive; T = RDKit::FilterCatalogEntry]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 31%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FilterMatchers.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++  -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FilterCatalog.dir/FilterMatchers.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatchers.cpp
In file included from /usr/include/c++/8/algorithm:62,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDLog.h:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Invariant.h:22,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Fingerprints.cpp:11:
/usr/include/c++/8/bits/stl_algo.h: In function '_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const unsigned int>]':
/usr/include/c++/8/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
     __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last,
     ^~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Fingerprints.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/set:60,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/SetQuery.h:13,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:29,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Fingerprints.cpp:11:
/usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<long long unsigned int&&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, std::vector<std::vector<int> > >; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<std::vector<int> > >, std::_Select1st<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<std::vector<int> > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >'} changed in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDLog.h:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Invariant.h:22,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Fingerprints.cpp:11:
/usr/include/c++/8/bits/stl_algo.h: In function 'RDKit::SparseIntVect<long long unsigned int>* RDKit::getUnfoldedRDKFingerprintMol(const RDKit::ROMol&, unsigned int, unsigned int, bool, bool, bool, std::vector<unsigned int>*, const std::vector<unsigned int>*, std::vector<std::vector<long long unsigned int> >*, std::map<long long unsigned int, std::vector<std::vector<int> > >*)':
/usr/include/c++/8/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
       return __find_if(__first, __last, __pred,
              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
          std::__iterator_category(__first));
          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Fingerprints.cpp:11:
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:61,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:26,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Fingerprints.cpp:11:
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, std::vector<std::vector<int> > >, std::_Select1st<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, std::vector<std::vector<int> > > > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, std::vector<std::vector<int> > > >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Fingerprints.cpp:812:1: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
 }
 ^
[ 31%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/FunctionalGroupHierarchy.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++  -DFilterCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FilterCatalog.dir/FunctionalGroupHierarchy.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FunctionalGroupHierarchy.cpp
[ 31%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/MorganFingerprints.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Fingerprints.dir/MorganFingerprints.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganFingerprints.cpp
[ 31%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/AtomPairs.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Fingerprints.dir/AtomPairs.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairs.cpp
[ 31%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/MACCS.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Fingerprints.dir/MACCS.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MACCS.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs/Catalog.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterCatalog.h:36,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FunctionalGroupHierarchy.h:36,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FunctionalGroupHierarchy.cpp:33:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'void RDKit::{anonymous}::hierarchy_create()':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 32%] Linking CXX shared library ../../../lib/libRDKitFilterCatalog.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/FilterCatalog.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitFilterCatalog.so.1 -o ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 CMakeFiles/FilterCatalog.dir/Filters.cpp.o CMakeFiles/FilterCatalog.dir/FilterCatalog.cpp.o CMakeFiles/FilterCatalog.dir/FilterCatalogEntry.cpp.o CMakeFiles/FilterCatalog.dir/FilterMatchers.cpp.o CMakeFiles/FilterCatalog.dir/FunctionalGroupHierarchy.cpp.o ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitFilterCatalog.so.1 ../../../lib/libRDKitFilterCatalog.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 32%] Built target FilterCatalog
make -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/DependInfo.cmake --color=
Scanning dependencies of target testSubgraphs1
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 32%] Building CXX object Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/test1.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBGRAPHS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testSubgraphs1.dir/test1.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs/test1.cpp
In file included from /usr/include/c++/8/set:60,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/SetQuery.h:13,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:29,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairs.cpp:11:
/usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long int&>, std::tuple<>}; _Key = long long int; _Val = std::pair<const long long int, int>; _KeyOfValue = std::_Select1st<std::pair<const long long int, int> >; _Compare = std::less<long long int>; _Alloc = std::allocator<std::pair<const long long int, int> >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<long long int, std::pair<const long long int, int>, std::_Select1st<std::pair<const long long int, int> >, std::less<long long int>, std::allocator<std::pair<const long long int, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long int, int> >'} changed in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:61,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:26,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairs.cpp:11:
/usr/include/c++/8/bits/stl_map.h: In function 'RDKit::SparseIntVect<long long int>* RDKit::AtomPairs::getTopologicalTorsionFingerprint(const RDKit::ROMol&, unsigned int, const std::vector<unsigned int>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, bool)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<long long int, std::pair<const long long int, int>, std::_Select1st<std::pair<const long long int, int> >, std::less<long long int>, std::allocator<std::pair<const long long int, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long int, int> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In function 'void RDKit::AtomPairs::{anonymous}::TorsionFpCalc(T*, const RDKit::ROMol&, unsigned int, unsigned int, const std::vector<unsigned int>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, bool) [with T = RDKit::SparseIntVect<long long int>]':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<long long int, std::pair<const long long int, int>, std::_Select1st<std::pair<const long long int, int> >, std::less<long long int>, std::allocator<std::pair<const long long int, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long int, int> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 33%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/FingerprintGenerator.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Fingerprints.dir/FingerprintGenerator.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp
make -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/DependInfo.cmake --color=
Scanning dependencies of target testSubgraphs2
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 33%] Building CXX object Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/test2.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBGRAPHS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testSubgraphs2.dir/test2.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs/test2.cpp
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp: In instantiation of 'SparseBitVect* RDKit::FingerprintGenerator<OutputType>::getSparseFingerprint(const RDKit::ROMol&, const std::vector<unsigned int>*, const std::vector<unsigned int>*, int, const RDKit::AdditionalOutput*, const std::vector<unsigned int>*, const std::vector<unsigned int>*) const [with OutputType = unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp:329:61:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp:230:24: warning: comparison of integer expressions of different signedness: 'int' and 'const value_type' {aka 'const unsigned int'} [-Wsign-compare]
         if (val.second >= dp_fingerprintArguments->d_countBounds[i]) {
             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp: In instantiation of 'SparseBitVect* RDKit::FingerprintGenerator<OutputType>::getSparseFingerprint(const RDKit::ROMol&, const std::vector<unsigned int>*, const std::vector<unsigned int>*, int, const RDKit::AdditionalOutput*, const std::vector<unsigned int>*, const std::vector<unsigned int>*) const [with OutputType = long long unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp:337:61:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp:230:24: warning: comparison of integer expressions of different signedness: 'int' and 'const value_type' {aka 'const unsigned int'} [-Wsign-compare]
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp: In instantiation of 'ExplicitBitVect* RDKit::FingerprintGenerator<OutputType>::getFingerprint(const RDKit::ROMol&, const std::vector<unsigned int>*, const std::vector<unsigned int>*, int, const RDKit::AdditionalOutput*, const std::vector<unsigned int>*, const std::vector<unsigned int>*) const [with OutputType = unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp:360:61:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp:293:24: warning: comparison of integer expressions of different signedness: 'int' and 'const value_type' {aka 'const unsigned int'} [-Wsign-compare]
         if (val.second >= dp_fingerprintArguments->d_countBounds[i]) {
             ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp: In instantiation of 'ExplicitBitVect* RDKit::FingerprintGenerator<OutputType>::getFingerprint(const RDKit::ROMol&, const std::vector<unsigned int>*, const std::vector<unsigned int>*, int, const RDKit::AdditionalOutput*, const std::vector<unsigned int>*, const std::vector<unsigned int>*) const [with OutputType = long long unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp:367:61:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp:293:24: warning: comparison of integer expressions of different signedness: 'int' and 'const value_type' {aka 'const unsigned int'} [-Wsign-compare]
[ 33%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/AtomPairGenerator.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Fingerprints.dir/AtomPairGenerator.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp
In file included from /usr/include/c++/8/map:60,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/SparseIntVect.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp:11:
/usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, int>; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, int> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, int> >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, int>, std::_Select1st<std::pair<const long long unsigned int, int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, int> >'} changed in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:61,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/SparseIntVect.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintGenerator.cpp:11:
/usr/include/c++/8/bits/stl_map.h: In member function 'RDKit::SparseIntVect<IndexType>* RDKit::FingerprintGenerator<OutputType>::getFingerprintHelper(const RDKit::ROMol&, const std::vector<unsigned int>*, const std::vector<unsigned int>*, int, const RDKit::AdditionalOutput*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, uint64_t) const [with OutputType = long long unsigned int]':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, int>, std::_Select1st<std::pair<const long long unsigned int, int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, int> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 33%] Linking CXX executable testSubgraphs1
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSubgraphs1.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testSubgraphs1.dir/test1.cpp.o  -o testSubgraphs1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 33%] Built target testSubgraphs1
make -f Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/DependInfo.cmake --color=
Scanning dependencies of target FragCatalog
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 33%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatalogUtils.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/c++  -DFragCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FragCatalog.dir/FragCatalogUtils.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatalogUtils.cpp
[ 33%] Linking CXX executable testSubgraphs2
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSubgraphs2.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testSubgraphs2.dir/test2.cpp.o  -o testSubgraphs2 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
[ 33%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatGenerator.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/c++  -DFragCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FragCatalog.dir/FragCatGenerator.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatGenerator.cpp
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 33%] Built target testSubgraphs2
[ 33%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/MorganGenerator.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Fingerprints.dir/MorganGenerator.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp: In instantiation of 'std::vector<RDKit::AtomEnvironment<OutputType>*> RDKit::AtomPair::AtomPairEnvGenerator<OutputType>::getEnvironments(const RDKit::ROMol&, RDKit::FingerprintArguments<OutputType>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, int, const RDKit::AdditionalOutput*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, bool) const [with OutputType = long long unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp:133:1:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp:138:39: warning: unused parameter 'atomInvariants' [-Wunused-parameter]
     const std::vector<std::uint32_t> *atomInvariants,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp:139:39: warning: unused parameter 'bondInvariants' [-Wunused-parameter]
     const std::vector<std::uint32_t> *bondInvariants,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp:140:16: warning: unused parameter 'hashResults' [-Wunused-parameter]
     const bool hashResults) const {
     ~~~~~~~~~~~^~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp: In instantiation of 'std::vector<RDKit::AtomEnvironment<OutputType>*> RDKit::AtomPair::AtomPairEnvGenerator<OutputType>::getEnvironments(const RDKit::ROMol&, RDKit::FingerprintArguments<OutputType>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, int, const RDKit::AdditionalOutput*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, bool) const [with OutputType = unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp:133:1:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp:138:39: warning: unused parameter 'atomInvariants' [-Wunused-parameter]
     const std::vector<std::uint32_t> *atomInvariants,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp:139:39: warning: unused parameter 'bondInvariants' [-Wunused-parameter]
     const std::vector<std::uint32_t> *bondInvariants,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp:140:16: warning: unused parameter 'hashResults' [-Wunused-parameter]
     const bool hashResults) const {
     ~~~~~~~~~~~^~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp: In instantiation of 'OutputType RDKit::AtomPair::AtomPairAtomEnv<OutputType>::getBitId(RDKit::FingerprintArguments<OutputType>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, const RDKit::AdditionalOutput*, bool) const [with OutputType = unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp:83:12:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp:86:39: warning: unused parameter 'bondInvariants' [-Wunused-parameter]
     const std::vector<std::uint32_t> *bondInvariants,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp: In instantiation of 'OutputType RDKit::AtomPair::AtomPairAtomEnv<OutputType>::getBitId(RDKit::FingerprintArguments<OutputType>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, const RDKit::AdditionalOutput*, bool) const [with OutputType = long long unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp:83:12:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp:86:39: warning: unused parameter 'bondInvariants' [-Wunused-parameter]
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp: In instantiation of 'RDKit::FingerprintGenerator<OutputType>* RDKit::MorganFingerprint::getMorganGenerator(unsigned int, bool, bool, bool, bool, RDKit::AtomInvariantsGenerator*, RDKit::BondInvariantsGenerator*, uint32_t, std::vector<unsigned int>, bool, bool) [with OutputType = unsigned int; uint32_t = unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:409:57:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:376:43: warning: unused parameter 'ownsBondInvGen' [-Wunused-parameter]
     const bool ownsAtomInvGen, const bool ownsBondInvGen) {
                                ~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp: In instantiation of 'RDKit::FingerprintGenerator<OutputType>* RDKit::MorganFingerprint::getMorganGenerator(unsigned int, bool, bool, bool, bool, RDKit::AtomInvariantsGenerator*, RDKit::BondInvariantsGenerator*, uint32_t, std::vector<unsigned int>, bool, bool) [with OutputType = long long unsigned int; uint32_t = unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:418:57:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:376:43: warning: unused parameter 'ownsBondInvGen' [-Wunused-parameter]
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp: In instantiation of 'std::vector<RDKit::AtomEnvironment<OutputType>*> RDKit::MorganFingerprint::MorganEnvGenerator<OutputType>::getEnvironments(const RDKit::ROMol&, RDKit::FingerprintArguments<OutputType>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, int, const RDKit::AdditionalOutput*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, bool) const [with OutputType = long long unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:156:1:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:159:39: warning: unused parameter 'ignoreAtoms' [-Wunused-parameter]
     const std::vector<std::uint32_t> *ignoreAtoms, const int confId,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:159:62: warning: unused parameter 'confId' [-Wunused-parameter]
     const std::vector<std::uint32_t> *ignoreAtoms, const int confId,
                                                    ~~~~~~~~~~^~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:160:29: warning: unused parameter 'additionalOutput' [-Wunused-parameter]
     const AdditionalOutput *additionalOutput,
     ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:163:16: warning: unused parameter 'hashResults' [-Wunused-parameter]
     const bool hashResults) const {
     ~~~~~~~~~~~^~~~~~~~~~~
[ 33%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatalogEntry.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/c++  -DFragCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FragCatalog.dir/FragCatalogEntry.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatalogEntry.cpp
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp: In instantiation of 'std::vector<RDKit::AtomEnvironment<OutputType>*> RDKit::MorganFingerprint::MorganEnvGenerator<OutputType>::getEnvironments(const RDKit::ROMol&, RDKit::FingerprintArguments<OutputType>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, int, const RDKit::AdditionalOutput*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, bool) const [with OutputType = unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:156:1:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:159:39: warning: unused parameter 'ignoreAtoms' [-Wunused-parameter]
     const std::vector<std::uint32_t> *ignoreAtoms, const int confId,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:159:62: warning: unused parameter 'confId' [-Wunused-parameter]
     const std::vector<std::uint32_t> *ignoreAtoms, const int confId,
                                                    ~~~~~~~~~~^~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:160:29: warning: unused parameter 'additionalOutput' [-Wunused-parameter]
     const AdditionalOutput *additionalOutput,
     ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:163:16: warning: unused parameter 'hashResults' [-Wunused-parameter]
     const bool hashResults) const {
     ~~~~~~~~~~~^~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp: In instantiation of 'OutputType RDKit::MorganFingerprint::MorganAtomEnv<OutputType>::getBitId(RDKit::FingerprintArguments<OutputType>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, const RDKit::AdditionalOutput*, bool) const [with OutputType = unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:136:12:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:137:39: warning: unused parameter 'arguments' [-Wunused-parameter]
     FingerprintArguments<OutputType> *arguments,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:138:39: warning: unused parameter 'atomInvariants' [-Wunused-parameter]
     const std::vector<std::uint32_t> *atomInvariants,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:139:39: warning: unused parameter 'bondInvariants' [-Wunused-parameter]
     const std::vector<std::uint32_t> *bondInvariants,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:140:58: warning: unused parameter 'hashResults' [-Wunused-parameter]
     const AdditionalOutput *additionalOutput, const bool hashResults) const {
                                               ~~~~~~~~~~~^~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp: In instantiation of 'OutputType RDKit::MorganFingerprint::MorganAtomEnv<OutputType>::getBitId(RDKit::FingerprintArguments<OutputType>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, const RDKit::AdditionalOutput*, bool) const [with OutputType = long long unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:136:12:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:137:39: warning: unused parameter 'arguments' [-Wunused-parameter]
     FingerprintArguments<OutputType> *arguments,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:138:39: warning: unused parameter 'atomInvariants' [-Wunused-parameter]
     const std::vector<std::uint32_t> *atomInvariants,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:139:39: warning: unused parameter 'bondInvariants' [-Wunused-parameter]
     const std::vector<std::uint32_t> *bondInvariants,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.cpp:140:58: warning: unused parameter 'hashResults' [-Wunused-parameter]
     const AdditionalOutput *additionalOutput, const bool hashResults) const {
                                               ~~~~~~~~~~~^~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/BadFileException.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatalogUtils.cpp:14:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs/Catalog.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/set:60,
                 from /usr/include/boost/graph/adjacency_list.hpp:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs/Catalog.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:11:
/usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const double&>, std::tuple<>}; _Key = double; _Val = std::pair<const double, int>; _KeyOfValue = std::_Select1st<std::pair<const double, int> >; _Compare = RDKit::ltDouble; _Alloc = std::allocator<std::pair<const double, int> >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'RDKit::ROMol* RDKit::{anonymous}::getSmarts(const string&)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:61,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/functional/hash.hpp:6,
                 from /usr/include/boost/unordered/unordered_set.hpp:18,
                 from /usr/include/boost/unordered_set.hpp:17,
                 from /usr/include/boost/graph/adjacency_list.hpp:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs/Catalog.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:11:
/usr/include/c++/8/bits/stl_map.h: In function 'unsigned int RDKit::addOrder1Paths(RDKit::PATH_LIST&, const RDKit::ROMol&, RDKit::FragCatalog*, RDKit::DOUBLE_INT_MAP&, const MatchVectType&)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs/Catalog.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In function 'unsigned int RDKit::addHigherOrderPaths(const INT_PATH_LIST_MAP&, const RDKit::ROMol&, RDKit::FragCatalog*, RDKit::DOUBLE_INT_MAP&, const MatchVectType&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:61,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/functional/hash.hpp:6,
                 from /usr/include/boost/unordered/unordered_set.hpp:18,
                 from /usr/include/boost/unordered_set.hpp:17,
                 from /usr/include/boost/graph/adjacency_list.hpp:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs/Catalog.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:11:
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 33%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/RDKitFPGenerator.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Fingerprints.dir/RDKitFPGenerator.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp
[ 33%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/FingerprintUtil.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Fingerprints.dir/FingerprintUtil.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintUtil.cpp
[ 33%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/TopologicalTorsionGenerator.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DFingerprints_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Fingerprints.dir/TopologicalTorsionGenerator.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatParams.h:16,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatalogEntry.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatalogEntry.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 33%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatParams.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/c++  -DFragCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FragCatalog.dir/FragCatParams.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatParams.cpp
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp: In instantiation of 'std::vector<RDKit::AtomEnvironment<OutputType>*> RDKit::RDKitFP::RDKitFPEnvGenerator<OutputType>::getEnvironments(const RDKit::ROMol&, RDKit::FingerprintArguments<OutputType>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, int, const RDKit::AdditionalOutput*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, bool) const [with OutputType = long long unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:111:1:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:114:39: warning: unused parameter 'ignoreAtoms' [-Wunused-parameter]
     const std::vector<std::uint32_t> *ignoreAtoms, const int confId,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:114:62: warning: unused parameter 'confId' [-Wunused-parameter]
     const std::vector<std::uint32_t> *ignoreAtoms, const int confId,
                                                    ~~~~~~~~~~^~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:115:29: warning: unused parameter 'additionalOutput' [-Wunused-parameter]
     const AdditionalOutput *additionalOutput,
     ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:117:39: warning: unused parameter 'bondInvariants' [-Wunused-parameter]
     const std::vector<std::uint32_t> *bondInvariants,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:118:16: warning: unused parameter 'hashResults' [-Wunused-parameter]
     const bool hashResults) const {
     ~~~~~~~~~~~^~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp: In instantiation of 'std::vector<RDKit::AtomEnvironment<OutputType>*> RDKit::RDKitFP::RDKitFPEnvGenerator<OutputType>::getEnvironments(const RDKit::ROMol&, RDKit::FingerprintArguments<OutputType>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, int, const RDKit::AdditionalOutput*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, bool) const [with OutputType = unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:111:1:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:114:39: warning: unused parameter 'ignoreAtoms' [-Wunused-parameter]
     const std::vector<std::uint32_t> *ignoreAtoms, const int confId,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:114:62: warning: unused parameter 'confId' [-Wunused-parameter]
     const std::vector<std::uint32_t> *ignoreAtoms, const int confId,
                                                    ~~~~~~~~~~^~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:115:29: warning: unused parameter 'additionalOutput' [-Wunused-parameter]
     const AdditionalOutput *additionalOutput,
     ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:117:39: warning: unused parameter 'bondInvariants' [-Wunused-parameter]
     const std::vector<std::uint32_t> *bondInvariants,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:118:16: warning: unused parameter 'hashResults' [-Wunused-parameter]
     const bool hashResults) const {
     ~~~~~~~~~~~^~~~~~~~~~~
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp:11:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp: In instantiation of 'RDKit::TopologicalTorsion::TopologicalTorsionArguments<OutputType>::TopologicalTorsionArguments(bool, uint32_t, bool, std::vector<unsigned int>, uint32_t) [with OutputType = long long unsigned int; uint32_t = unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp:161:7:   required from 'RDKit::FingerprintGenerator<OutputType>* RDKit::TopologicalTorsion::getTopologicalTorsionGenerator(bool, uint32_t, RDKit::AtomInvariantsGenerator*, bool, std::vector<unsigned int>, uint32_t, bool) [with OutputType = long long unsigned int; uint32_t = unsigned int]'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp:183:58:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:26:18: warning: 'RDKit::TopologicalTorsion::TopologicalTorsionArguments<long long unsigned int>::d_torsionAtomCount' will be initialized after [-Wreorder]
   const uint32_t d_torsionAtomCount;
                  ^~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp:27:76: warning:   base 'RDKit::FingerprintArguments<long long unsigned int>' [-Wreorder]
       FingerprintArguments<OutputType>(countSimulation, countBounds, fpSize){};
                                                                            ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp:21:1: warning:   when initialized here [-Wreorder]
 TopologicalTorsionArguments<OutputType>::TopologicalTorsionArguments(
 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp: In instantiation of 'OutputType RDKit::RDKitFP::RDKitFPAtomEnv<OutputType>::getBitId(RDKit::FingerprintArguments<OutputType>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, const RDKit::AdditionalOutput*, bool) const [with OutputType = unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:90:12:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:91:39: warning: unused parameter 'arguments' [-Wunused-parameter]
     FingerprintArguments<OutputType> *arguments,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:92:39: warning: unused parameter 'atomInvariants' [-Wunused-parameter]
     const std::vector<std::uint32_t> *atomInvariants,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:93:39: warning: unused parameter 'bondInvariants' [-Wunused-parameter]
     const std::vector<std::uint32_t> *bondInvariants,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:94:29: warning: unused parameter 'additionalOutput' [-Wunused-parameter]
     const AdditionalOutput *additionalOutput, const bool hashResults) const {
     ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:94:58: warning: unused parameter 'hashResults' [-Wunused-parameter]
     const AdditionalOutput *additionalOutput, const bool hashResults) const {
                                               ~~~~~~~~~~~^~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp: In instantiation of 'OutputType RDKit::RDKitFP::RDKitFPAtomEnv<OutputType>::getBitId(RDKit::FingerprintArguments<OutputType>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, const RDKit::AdditionalOutput*, bool) const [with OutputType = long long unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:90:12:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:91:39: warning: unused parameter 'arguments' [-Wunused-parameter]
     FingerprintArguments<OutputType> *arguments,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:92:39: warning: unused parameter 'atomInvariants' [-Wunused-parameter]
     const std::vector<std::uint32_t> *atomInvariants,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:93:39: warning: unused parameter 'bondInvariants' [-Wunused-parameter]
     const std::vector<std::uint32_t> *bondInvariants,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:94:29: warning: unused parameter 'additionalOutput' [-Wunused-parameter]
     const AdditionalOutput *additionalOutput, const bool hashResults) const {
     ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.cpp:94:58: warning: unused parameter 'hashResults' [-Wunused-parameter]
     const AdditionalOutput *additionalOutput, const bool hashResults) const {
                                               ~~~~~~~~~~~^~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp: In instantiation of 'std::vector<RDKit::AtomEnvironment<OutputType>*> RDKit::TopologicalTorsion::TopologicalTorsionEnvGenerator<OutputType>::getEnvironments(const RDKit::ROMol&, RDKit::FingerprintArguments<OutputType>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, int, const RDKit::AdditionalOutput*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, bool) const [with OutputType = long long unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp:58:1:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp:61:62: warning: unused parameter 'confId' [-Wunused-parameter]
     const std::vector<std::uint32_t> *ignoreAtoms, const int confId,
                                                    ~~~~~~~~~~^~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp:62:29: warning: unused parameter 'additionalOutput' [-Wunused-parameter]
     const AdditionalOutput *additionalOutput,
     ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp:64:39: warning: unused parameter 'bondInvariants' [-Wunused-parameter]
     const std::vector<std::uint32_t> *bondInvariants,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp: In instantiation of 'OutputType RDKit::TopologicalTorsion::TopologicalTorsionAtomEnv<OutputType>::getBitId(RDKit::FingerprintArguments<OutputType>*, const std::vector<unsigned int>*, const std::vector<unsigned int>*, const RDKit::AdditionalOutput*, bool) const [with OutputType = long long unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp:43:12:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp:44:39: warning: unused parameter 'arguments' [-Wunused-parameter]
     FingerprintArguments<OutputType> *arguments,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp:45:39: warning: unused parameter 'atomInvariants' [-Wunused-parameter]
     const std::vector<std::uint32_t> *atomInvariants,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp:46:39: warning: unused parameter 'bondInvariants' [-Wunused-parameter]
     const std::vector<std::uint32_t> *bondInvariants,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp:47:29: warning: unused parameter 'additionalOutput' [-Wunused-parameter]
     const AdditionalOutput *additionalOutput, const bool hashResults) const {
     ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.cpp:47:58: warning: unused parameter 'hashResults' [-Wunused-parameter]
     const AdditionalOutput *additionalOutput, const bool hashResults) const {
                                               ~~~~~~~~~~~^~~~~~~~~~~
make -f Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PartialCharges /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/DependInfo.cmake --color=
Scanning dependencies of target testPartialCharges
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 33%] Building CXX object Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/test1.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_PARTIALCHARGES_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testPartialCharges.dir/test1.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PartialCharges/test1.cpp
make -f Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build.make Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PartialCharges/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/DependInfo.cmake --color=
Scanning dependencies of target rdPartialCharges
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build.make Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 33%] Building CXX object Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/rdPartialCharges.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdPartialCharges_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdPartialCharges.dir/rdPartialCharges.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PartialCharges/Wrap/rdPartialCharges.cpp
[ 34%] Linking CXX shared library ../../../lib/libRDKitFingerprints.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_link_script CMakeFiles/Fingerprints.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitFingerprints.so.1 -o ../../../lib/libRDKitFingerprints.so.1.2018.09.1 CMakeFiles/Fingerprints.dir/Fingerprints.cpp.o CMakeFiles/Fingerprints.dir/PatternFingerprints.cpp.o CMakeFiles/Fingerprints.dir/MorganFingerprints.cpp.o CMakeFiles/Fingerprints.dir/AtomPairs.cpp.o CMakeFiles/Fingerprints.dir/MACCS.cpp.o CMakeFiles/Fingerprints.dir/FingerprintGenerator.cpp.o CMakeFiles/Fingerprints.dir/AtomPairGenerator.cpp.o CMakeFiles/Fingerprints.dir/MorganGenerator.cpp.o CMakeFiles/Fingerprints.dir/RDKitFPGenerator.cpp.o CMakeFiles/Fingerprints.dir/FingerprintUtil.cpp.o CMakeFiles/Fingerprints.dir/TopologicalTorsionGenerator.cpp.o ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1 ../../../lib/libRDKitFingerprints.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 34%] Built target Fingerprints
make -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/DependInfo.cmake --color=
Scanning dependencies of target MolChemicalFeatures
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make -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 34%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeature.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/c++  -DMolChemicalFeatures_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCHEMICALFEATURES_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeature.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/MolChemicalFeature.cpp
[ 34%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragFPGenerator.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/c++  -DFragCatalog_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FragCatalog.dir/FragFPGenerator.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragFPGenerator.cpp
[ 34%] Linking CXX executable testPartialCharges
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges && /usr/bin/cmake -E cmake_link_script CMakeFiles/testPartialCharges.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testPartialCharges.dir/test1.cpp.o  -o testPartialCharges ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 34%] Built target testPartialCharges
make -f Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/DependInfo.cmake --color=
Scanning dependencies of target rdShapeHelpers
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 34%] Building CXX object Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/rdShapeHelpers.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdShapeHelpers_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdShapeHelpers.dir/rdShapeHelpers.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers/Wrap/rdShapeHelpers.cpp
[ 35%] Linking CXX shared module ../../../../rdkit/Chem/rdPartialCharges.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdPartialCharges.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdPartialCharges.so CMakeFiles/rdPartialCharges.dir/rdPartialCharges.cpp.o ../../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 35%] Built target rdPartialCharges
make -f Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ReducedGraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/DependInfo.cmake --color=
Scanning dependencies of target ReducedGraphs
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 35%] Building CXX object Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/ReducedGraphs.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_REDUCEDGRAPHS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DReducedGraphs_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ReducedGraphs.dir/ReducedGraphs.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ReducedGraphs/ReducedGraphs.cpp
[ 36%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureDef.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/c++  -DMolChemicalFeatures_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCHEMICALFEATURES_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureDef.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.cpp
In file included from /usr/include/c++/8/set:60,
                 from /usr/include/boost/graph/adjacency_list.hpp:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs/Catalog.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragFPGenerator.cpp:11:
/usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const double&>, std::tuple<>}; _Key = double; _Val = std::pair<const double, int>; _KeyOfValue = std::_Select1st<std::pair<const double, int> >; _Compare = RDKit::ltDouble; _Alloc = std::allocator<std::pair<const double, int> >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:61,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/functional/hash.hpp:6,
                 from /usr/include/boost/unordered/unordered_set.hpp:18,
                 from /usr/include/boost/unordered_set.hpp:17,
                 from /usr/include/boost/graph/adjacency_list.hpp:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs/Catalog.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragFPGenerator.cpp:11:
/usr/include/c++/8/bits/stl_map.h: In member function 'void RDKit::FragFPGenerator::computeFP(const RDKit::ROMol&, const FragCatalog&, const MatchVectType&, ExplicitBitVect*)':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<double, std::pair<const double, int>, std::_Select1st<std::pair<const double, int> >, RDKit::ltDouble, std::allocator<std::pair<const double, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const double, int> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 37%] Linking CXX shared library ../../../lib/libRDKitFragCatalog.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/FragCatalog.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitFragCatalog.so.1 -o ../../../lib/libRDKitFragCatalog.so.1.2018.09.1 CMakeFiles/FragCatalog.dir/FragCatalogUtils.cpp.o CMakeFiles/FragCatalog.dir/FragCatGenerator.cpp.o CMakeFiles/FragCatalog.dir/FragCatalogEntry.cpp.o CMakeFiles/FragCatalog.dir/FragCatParams.cpp.o CMakeFiles/FragCatalog.dir/FragFPGenerator.cpp.o ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitFragCatalog.so.1.2018.09.1 ../../../lib/libRDKitFragCatalog.so.1 ../../../lib/libRDKitFragCatalog.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 37%] Built target FragCatalog
make -f Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SubstructLibrary /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/DependInfo.cmake --color=
Scanning dependencies of target SubstructLibrary
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 38%] Building CXX object Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/SubstructLibrary.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBSTRUCTLIBRARY_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DSubstructLibrary_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/SubstructLibrary.dir/SubstructLibrary.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SubstructLibrary/SubstructLibrary.cpp
[ 38%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/c++  -DMolChemicalFeatures_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCHEMICALFEATURES_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureFactory.cpp
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Conformer.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:36,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers/Wrap/rdShapeHelpers.cpp:13:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h: In function 'boost::python::tuple RDKit::getUnionOfTwoBox(boost::python::tuple, boost::python::tuple)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:56:31: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
       : Point(other), x(other.x), y(other.y), z(other.z) {}
                         ~~~~~~^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:56:43: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::y' may be used uninitialized in this function [-Wmaybe-uninitialized]
       : Point(other), x(other.x), y(other.y), z(other.z) {}
                                     ~~~~~~^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:56:55: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::z' may be used uninitialized in this function [-Wmaybe-uninitialized]
       : Point(other), x(other.x), y(other.y), z(other.z) {}
                                                 ~~~~~~^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:56:31: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
       : Point(other), x(other.x), y(other.y), z(other.z) {}
                         ~~~~~~^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:56:43: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::y' may be used uninitialized in this function [-Wmaybe-uninitialized]
       : Point(other), x(other.x), y(other.y), z(other.z) {}
                                     ~~~~~~^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:56:55: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::z' may be used uninitialized in this function [-Wmaybe-uninitialized]
       : Point(other), x(other.x), y(other.y), z(other.z) {}
                                                 ~~~~~~^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:56:31: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
       : Point(other), x(other.x), y(other.y), z(other.z) {}
                         ~~~~~~^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:56:43: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::y' may be used uninitialized in this function [-Wmaybe-uninitialized]
       : Point(other), x(other.x), y(other.y), z(other.z) {}
                                     ~~~~~~^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:56:55: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::z' may be used uninitialized in this function [-Wmaybe-uninitialized]
       : Point(other), x(other.x), y(other.y), z(other.z) {}
                                                 ~~~~~~^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:56:31: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
       : Point(other), x(other.x), y(other.y), z(other.z) {}
                         ~~~~~~^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:56:43: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::y' may be used uninitialized in this function [-Wmaybe-uninitialized]
       : Point(other), x(other.x), y(other.y), z(other.z) {}
                                     ~~~~~~^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:56:55: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::z' may be used uninitialized in this function [-Wmaybe-uninitialized]
       : Point(other), x(other.x), y(other.y), z(other.z) {}
                                                 ~~~~~~^
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ReducedGraphs/ReducedGraphs.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'RDKit::ROMol* RDKit::ReducedGraphs::generateMolExtendedReducedGraph(const RDKit::ROMol&, std::vector<boost::dynamic_bitset<> >*)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 38%] Linking CXX shared module ../../../../rdkit/Chem/rdShapeHelpers.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdShapeHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdShapeHelpers.so CMakeFiles/rdShapeHelpers.dir/rdShapeHelpers.cpp.o ../../../../lib/libRDKitShapeHelpers.so.1.2018.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 38%] Built target rdShapeHelpers
make -f Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/DependInfo.cmake --color=
Scanning dependencies of target testSLNParse
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 38%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/test.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SLNPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testSLNParse.dir/test.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse/test.cpp
[ 38%] Linking CXX shared library ../../../lib/libRDKitReducedGraphs.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs && /usr/bin/cmake -E cmake_link_script CMakeFiles/ReducedGraphs.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitReducedGraphs.so.1 -o ../../../lib/libRDKitReducedGraphs.so.1.2018.09.1 CMakeFiles/ReducedGraphs.dir/ReducedGraphs.cpp.o ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitReducedGraphs.so.1.2018.09.1 ../../../lib/libRDKitReducedGraphs.so.1 ../../../lib/libRDKitReducedGraphs.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 38%] Built target ReducedGraphs
make -f Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/build.make Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/DependInfo.cmake --color=
Scanning dependencies of target rdSLNParse
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/build.make Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 38%] Building CXX object Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/rdSLNParse.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSLNParse_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdSLNParse.dir/rdSLNParse.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse/Wrap/rdSLNParse.cpp
[ 38%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/FeatureParser.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/c++  -DMolChemicalFeatures_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLCHEMICALFEATURES_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolChemicalFeatures.dir/FeatureParser.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/FeatureParser.cpp
[ 38%] Linking CXX shared library ../../../lib/libRDKitSubstructLibrary.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary && /usr/bin/cmake -E cmake_link_script CMakeFiles/SubstructLibrary.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitSubstructLibrary.so.1 -o ../../../lib/libRDKitSubstructLibrary.so.1.2018.09.1 CMakeFiles/SubstructLibrary.dir/SubstructLibrary.cpp.o ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitSubstructLibrary.so.1.2018.09.1 ../../../lib/libRDKitSubstructLibrary.so.1 ../../../lib/libRDKitSubstructLibrary.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 38%] Built target SubstructLibrary
make -f Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/DependInfo.cmake --color=
Scanning dependencies of target rdchem
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 39%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/rdchem.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdchem.dir/rdchem.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/rdchem.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/FeatureParser.h:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/FeatureParser.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<const double*, std::vector<double> >; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
[ 40%] Linking CXX shared module ../../../../rdkit/Chem/rdSLNParse.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdSLNParse.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdSLNParse.so CMakeFiles/rdSLNParse.dir/rdSLNParse.cpp.o ../../../../lib/libRDKitSLNParse.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 40%] Built target rdSLNParse
make -f Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Optimizer /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/DependInfo.cmake --color=
Scanning dependencies of target testOptimizer
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 41%] Building CXX object Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/testOptimizer.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_OPTIMIZER_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testOptimizer.dir/testOptimizer.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Optimizer/testOptimizer.cpp
/usr/include/c++/8/bits/vector.tcc: In function 'RDKit::MolChemicalFeatureDef* RDKit::Local::parseFeatureDef(std::istream&, const string&, unsigned int&, const std::map<std::__cxx11::basic_string<char>, std::__cxx11::basic_string<char> >&)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/FeatureParser.h:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/FeatureParser.cpp:11:
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
    _M_range_insert(__pos, __first, __last,
    ^~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<const double*, std::vector<double> >' changed in GCC 7.1
[ 41%] Linking CXX shared library ../../../lib/libRDKitMolChemicalFeatures.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolChemicalFeatures.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitMolChemicalFeatures.so.1 -o ../../../lib/libRDKitMolChemicalFeatures.so.1.2018.09.1 CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeature.cpp.o CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureDef.cpp.o CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o CMakeFiles/MolChemicalFeatures.dir/FeatureParser.cpp.o ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolChemicalFeatures.so.1.2018.09.1 ../../../lib/libRDKitMolChemicalFeatures.so.1 ../../../lib/libRDKitMolChemicalFeatures.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 41%] Built target MolChemicalFeatures
[ 41%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Table.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdchem.dir/Table.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/Table.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:16,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory/Snapshot.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Optimizer/BFGSOpt.h:13,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Optimizer/testOptimizer.cpp:16:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDKit::Snapshot&}; _Tp = RDKit::Snapshot; _Alloc = std::allocator<RDKit::Snapshot>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Snapshot>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:16,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory/Snapshot.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Optimizer/BFGSOpt.h:13,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Optimizer/testOptimizer.cpp:16:
/usr/include/c++/8/bits/stl_vector.h: In function 'int BFGSOpt::minimize(unsigned int, double*, double, unsigned int&, double&, EnergyFunctor, GradientFunctor, unsigned int, RDKit::SnapshotVect*, double, unsigned int) [with EnergyFunctor = double (*)(double*); GradientFunctor = double (*)(double*, double*)]':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
[ 41%] Linking CXX executable testOptimizer
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer && /usr/bin/cmake -E cmake_link_script CMakeFiles/testOptimizer.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testOptimizer.dir/testOptimizer.cpp.o  -o testOptimizer ../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 41%] Built target testOptimizer
make -f Code/ForceField/CMakeFiles/ForceField.dir/build.make Code/ForceField/CMakeFiles/ForceField.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/CMakeFiles/ForceField.dir/DependInfo.cmake --color=
Scanning dependencies of target ForceField
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ForceField/CMakeFiles/ForceField.dir/build.make Code/ForceField/CMakeFiles/ForceField.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 41%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/ForceField.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/ForceField.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/ForceField.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/ForceField.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/ForceField.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDKit::Snapshot&}; _Tp = RDKit::Snapshot; _Alloc = std::allocator<RDKit::Snapshot>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Snapshot>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >'} changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/ForceField.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/ForceField.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In function 'int BFGSOpt::minimize(unsigned int, double*, double, unsigned int&, double&, EnergyFunctor, GradientFunctor, unsigned int, RDKit::SnapshotVect*, double, unsigned int) [with EnergyFunctor = ForceFieldsHelper::calcEnergy; GradientFunctor = ForceFieldsHelper::calcGradient]':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Snapshot*, std::vector<RDKit::Snapshot> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In member function 'double ForceFields::ForceField::calcEnergy(std::vector<double>*) const':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
[ 41%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/AngleBend.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/UFF/AngleBend.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/AngleBend.cpp
[ 41%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Atom.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdchem.dir/Atom.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/Atom.cpp
[ 41%] Linking CXX executable testSLNParse
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSLNParse.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testSLNParse.dir/test.cpp.o  -o testSLNParse ../../../lib/libRDKitSLNParse.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 41%] Built target testSLNParse
make -f Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/DependInfo.cmake --color=
Scanning dependencies of target FileParsers
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 41%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/Mol2FileParser.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/Mol2FileParser.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/Mol2FileParser.cpp
[ 41%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Bond.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdchem.dir/Bond.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/Bond.cpp
[ 41%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/BondStretch.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/UFF/BondStretch.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/BondStretch.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/Mol2FileParser.cpp:37:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/Mol2FileParser.cpp:37:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/Mol2FileParser.cpp:37:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDGeom::Point3D&}; _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
[ 41%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/Nonbonded.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/UFF/Nonbonded.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/Nonbonded.cpp
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, T&) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/Mol2FileParser.cpp:37:
/usr/include/c++/8/bits/stl_vector.h: In function 'RDKit::RWMol* RDKit::Mol2DataStreamToMol(std::istream*, bool, bool, RDKit::Mol2Type, bool)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 41%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolFileParser.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/MolFileParser.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolFileParser.cpp
[ 41%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/Inversion.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/UFF/Inversion.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/Inversion.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/Atom.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/Bond.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 42%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/TorsionAngle.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/UFF/TorsionAngle.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/TorsionAngle.cpp
[ 42%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Mol.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdchem.dir/Mol.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/Mol.cpp
[ 42%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/DistanceConstraint.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/UFF/DistanceConstraint.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/DistanceConstraint.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolFileParser.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolFileParser.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolFileParser.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 42%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Conformer.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdchem.dir/Conformer.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/Conformer.cpp
[ 42%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/AngleConstraint.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/UFF/AngleConstraint.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/AngleConstraint.cpp
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolFileParser.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In function 'bool RDKit::FileParserUtils::ParseV2000CTAB(std::istream*, unsigned int&, RDKit::RWMol*, RDKit::Conformer*&, bool&, unsigned int&, unsigned int&, bool)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 42%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/TorsionConstraint.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/UFF/TorsionConstraint.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/TorsionConstraint.cpp
/usr/include/c++/8/bits/stl_vector.h: In function 'void RDKit::{anonymous}::ParseV3000AtomBlock(std::istream*, unsigned int&, unsigned int, RDKit::RWMol*, RDKit::Conformer*)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/Conformer.cpp:13:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/Conformer.cpp:13:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/Conformer.cpp:20:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h: In member function 'T PySequenceHolder<T>::operator[](unsigned int) const [with T = double]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       T res = python::extract<T>(d_seq[which]);
         ^~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/Conformer.cpp:13:
/usr/include/c++/8/bits/stl_vector.h: In function 'void RDKit::SetAtomPos(RDKit::Conformer*, unsigned int, boost::python::api::object)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 43%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/RingInfo.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdchem.dir/RingInfo.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/RingInfo.cpp
[ 43%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/PositionConstraint.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/UFF/PositionConstraint.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/PositionConstraint.cpp
[ 44%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolFileStereochem.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/MolFileStereochem.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolFileStereochem.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/Mol.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 44%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/Params.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/UFF/Params.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/Params.cpp
[ 44%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolFileWriter.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/MolFileWriter.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolFileWriter.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolFileStereochem.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolFileStereochem.cpp:13:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'void RDKit::ClearSingleBondDirFlags(RDKit::ROMol&)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 45%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/AngleBend.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/MMFF/AngleBend.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/AngleBend.cpp
[ 45%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/EditableMol.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdchem.dir/EditableMol.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/EditableMol.cpp
[ 45%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/BondStretch.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/MMFF/BondStretch.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/BondStretch.cpp
[ 45%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/StretchBend.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/MMFF/StretchBend.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/StretchBend.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolFileWriter.cpp:13:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<unsigned int, RDGeom::Point3D>}; _Tp = std::pair<unsigned int, RDGeom::Point3D>; _Alloc = std::allocator<std::pair<unsigned int, RDGeom::Point3D> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::pair<unsigned int, RDGeom::Point3D> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDLog.h:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Invariant.h:22,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolFileWriter.cpp:13:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__unguarded_linear_insert(_RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >; _Compare = __gnu_cxx::__ops::_Val_comp_iter<Rankers::pairLess<unsigned int, RDGeom::Point3D> >]':
/usr/include/c++/8/bits/stl_algo.h:1821:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
     __unguarded_linear_insert(_RandomAccessIterator __last,
     ^~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairLess<unsigned int, RDGeom::Point3D> >]':
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
     __insertion_sort(_RandomAccessIterator __first,
     ^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1840:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
In file included from /usr/include/c++/8/bits/char_traits.h:39,
                 from /usr/include/c++/8/string:40,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Invariant.h:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolFileWriter.cpp:13:
/usr/include/c++/8/bits/stl_algobase.h: In function 'void std::iter_swap(_ForwardIterator1, _ForwardIterator2) [with _ForwardIterator1 = __gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >; _ForwardIterator2 = __gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >]':
/usr/include/c++/8/bits/stl_algobase.h:120:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
     iter_swap(_ForwardIterator1 __a, _ForwardIterator2 __b)
     ^~~~~~~~~
/usr/include/c++/8/bits/stl_algobase.h:120:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algobase.h:120:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
In file included from /usr/include/c++/8/bits/stl_algo.h:61,
                 from /usr/include/c++/8/algorithm:62,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDLog.h:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Invariant.h:22,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolFileWriter.cpp:13:
/usr/include/c++/8/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >; _Distance = int; _Tp = std::pair<unsigned int, RDGeom::Point3D>; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairLess<unsigned int, RDGeom::Point3D> >]':
/usr/include/c++/8/bits/stl_heap.h:214:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
     __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
     ^~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDLog.h:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Invariant.h:22,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolFileWriter.cpp:13:
/usr/include/c++/8/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_comp_iter<Rankers::pairLess<unsigned int, RDGeom::Point3D> >]':
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
     __introsort_loop(_RandomAccessIterator __first,
     ^~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1940:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_algo.h:84:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
      std::iter_swap(__result, __b);
      ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:86:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
      std::iter_swap(__result, __c);
      ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:88:20: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
      std::iter_swap(__result, __a);
      ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1954:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
    std::__introsort_loop(__cut, __last, __depth_limit, __comp);
    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolFileWriter.cpp:13:
/usr/include/c++/8/bits/vector.tcc: In function 'void RDKit::GetMolFileAtomProperties(const RDKit::Atom*, const RDKit::Conformer*, int&, int&, unsigned int&, double&, double&, double&)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDLog.h:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Invariant.h:22,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/FileParsers.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolFileWriter.cpp:13:
/usr/include/c++/8/bits/stl_algo.h:1968:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
    std::__introsort_loop(__first, __last,
    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
     std::__lg(__last - __first) * 2,
     ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
     __comp);
     ~~~~~~~              
/usr/include/c++/8/bits/stl_algo.h:1885:25: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
    std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
    ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:1890:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<unsigned int, RDGeom::Point3D>*, std::vector<std::pair<unsigned int, RDGeom::Point3D> > >' changed in GCC 7.1
  std::__insertion_sort(__first, __last, __comp);
  ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
[ 45%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/OopBend.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/MMFF/OopBend.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/OopBend.cpp
[ 45%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/ForwardSDMolSupplier.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/ForwardSDMolSupplier.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/ForwardSDMolSupplier.cpp
[ 45%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/TorsionAngle.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/MMFF/TorsionAngle.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/TorsionAngle.cpp
[ 45%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/MonomerInfo.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdchem.dir/MonomerInfo.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/MonomerInfo.cpp
[ 45%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/Nonbonded.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/MMFF/Nonbonded.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Nonbonded.cpp
[ 45%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SDMolSupplier.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/SDMolSupplier.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SDMolSupplier.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/BadFileException.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/ForwardSDMolSupplier.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'virtual void RDKit::ForwardSDMolSupplier::readMolProps(RDKit::ROMol*)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 45%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SDWriter.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/SDWriter.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SDWriter.cpp
[ 46%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/DistanceConstraint.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/MMFF/DistanceConstraint.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/DistanceConstraint.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/BadFileException.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SDMolSupplier.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::fpos<__mbstate_t>&}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/BadFileException.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SDMolSupplier.cpp:12:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void RDKit::SDMolSupplier::moveTo(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In member function 'virtual RDKit::ROMol* RDKit::SDMolSupplier::next()':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In member function 'unsigned int RDKit::SDMolSupplier::length()':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
[ 46%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/AngleConstraint.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/MMFF/AngleConstraint.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/AngleConstraint.cpp
[ 46%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SmilesMolSupplier.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/SmilesMolSupplier.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SmilesMolSupplier.cpp
[ 46%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/ResonanceMolSupplier.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdchem.dir/ResonanceMolSupplier.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/ResonanceMolSupplier.cpp
make -f Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build.make Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/DependInfo.cmake --color=
Scanning dependencies of target rdFingerprintGenerator
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build.make Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 46%] Building CXX object Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/FingerprintGeneratorWrapper.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdFingerprintGenerator_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdFingerprintGenerator.dir/FingerprintGeneratorWrapper.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Wrap/FingerprintGeneratorWrapper.cpp
[ 46%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/TorsionConstraint.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/MMFF/TorsionConstraint.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/TorsionConstraint.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/BadFileException.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SmilesMolSupplier.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'RDKit::ROMol* RDKit::SmilesMolSupplier::processLine(std::__cxx11::string)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Wrap/FingerprintGeneratorWrapper.cpp: In function 'const std::vector<const RDKit::ROMol*> RDKit::FingerprintWrapper::convertPyArgumentsForBulk(const boost::python::list&)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Wrap/FingerprintGeneratorWrapper.cpp:190:25: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
       for (int i = 0; i < len; i++) {
                       ~~^~~~~
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Wrap/FingerprintGeneratorWrapper.cpp:17:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Wrap/MorganWrapper.cpp: In instantiation of 'RDKit::FingerprintGenerator<OutputType>* RDKit::MorganWrapper::getMorganGenerator(unsigned int, bool, bool, bool, bool, bool, boost::python::api::object&, uint32_t, boost::python::api::object&, boost::python::api::object&) [with OutputType = long long unsigned int; uint32_t = unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Wrap/MorganWrapper.cpp:121:63:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Wrap/MorganWrapper.cpp:24:50: warning: unused parameter 'includeRingMembership' [-Wunused-parameter]
     const bool onlyNonzeroInvariants, const bool includeRingMembership,
                                       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Wrap/FingerprintGeneratorWrapper.cpp:18:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Wrap/RDKitFPWrapper.cpp: In instantiation of 'RDKit::FingerprintGenerator<OutputType>* RDKit::RDKitFPWrapper::getRDKitFPGenerator(unsigned int, unsigned int, bool, bool, bool, bool, boost::python::api::object&, uint32_t, boost::python::api::object&) [with OutputType = long long unsigned int; uint32_t = unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Wrap/RDKitFPWrapper.cpp:92:63:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Wrap/RDKitFPWrapper.cpp:27:28: warning: unused variable 'bondInvariantsGenerator' [-Wunused-variable]
   BondInvariantsGenerator *bondInvariantsGenerator = nullptr;
                            ^~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Wrap/FingerprintGeneratorWrapper.cpp:19:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Wrap/TopologicalTorsionWrapper.cpp: In instantiation of 'RDKit::FingerprintGenerator<OutputType>* RDKit::TopologicalTorsionWrapper::getTopologicalTorsionFPGenerator(bool, uint32_t, bool, boost::python::api::object&, uint32_t, boost::python::api::object&) [with OutputType = long long unsigned int; uint32_t = unsigned int]':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Wrap/TopologicalTorsionWrapper.cpp:75:63:   required from here
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Wrap/TopologicalTorsionWrapper.cpp:26:28: warning: unused variable 'bondInvariantsGenerator' [-Wunused-variable]
   BondInvariantsGenerator *bondInvariantsGenerator = nullptr;
                            ^~~~~~~~~~~~~~~~~~~~~~~
[ 47%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SmilesWriter.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/SmilesWriter.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SmilesWriter.cpp
[ 47%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/PositionConstraint.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/MMFF/PositionConstraint.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/PositionConstraint.cpp
[ 47%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/Params.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/c++  -DForceField_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceField.dir/MMFF/Params.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Params.cpp
[ 47%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/MolBundle.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdchem_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdchem.dir/MolBundle.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/MolBundle.cpp
[ 47%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TDTMolSupplier.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/TDTMolSupplier.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/TDTMolSupplier.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Params.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Params.cpp:17:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFPBCI&}; _Tp = ForceFields::MMFF::MMFFPBCI; _Alloc = std::allocator<ForceFields::MMFF::MMFFPBCI>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFPBCI>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFPBCI*, std::vector<ForceFields::MMFF::MMFFPBCI> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFChg&}; _Tp = ForceFields::MMFF::MMFFChg; _Alloc = std::allocator<ForceFields::MMFF::MMFFChg>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFChg>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFChg*, std::vector<ForceFields::MMFF::MMFFChg> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFBond&}; _Tp = ForceFields::MMFF::MMFFBond; _Alloc = std::allocator<ForceFields::MMFF::MMFFBond>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFBond>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFBond*, std::vector<ForceFields::MMFF::MMFFBond> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFHerschbachLaurie&}; _Tp = ForceFields::MMFF::MMFFHerschbachLaurie; _Alloc = std::allocator<ForceFields::MMFF::MMFFHerschbachLaurie>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFHerschbachLaurie>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFHerschbachLaurie*, std::vector<ForceFields::MMFF::MMFFHerschbachLaurie> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFCovRadPauEle&}; _Tp = ForceFields::MMFF::MMFFCovRadPauEle; _Alloc = std::allocator<ForceFields::MMFF::MMFFCovRadPauEle>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFCovRadPauEle>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFCovRadPauEle*, std::vector<ForceFields::MMFF::MMFFCovRadPauEle> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFAngle&}; _Tp = ForceFields::MMFF::MMFFAngle; _Alloc = std::allocator<ForceFields::MMFF::MMFFAngle>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFAngle>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFAngle*, std::vector<ForceFields::MMFF::MMFFAngle> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFStbn&}; _Tp = ForceFields::MMFF::MMFFStbn; _Alloc = std::allocator<ForceFields::MMFF::MMFFStbn>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFStbn>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFStbn*, std::vector<ForceFields::MMFF::MMFFStbn> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFOop&}; _Tp = ForceFields::MMFF::MMFFOop; _Alloc = std::allocator<ForceFields::MMFF::MMFFOop>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFOop>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFOop*, std::vector<ForceFields::MMFF::MMFFOop> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFTor&}; _Tp = ForceFields::MMFF::MMFFTor; _Alloc = std::allocator<ForceFields::MMFF::MMFFTor>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFTor>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFTor*, std::vector<ForceFields::MMFF::MMFFTor> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const ForceFields::MMFF::MMFFVdW&}; _Tp = ForceFields::MMFF::MMFFVdW; _Alloc = std::allocator<ForceFields::MMFF::MMFFVdW>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<ForceFields::MMFF::MMFFVdW>::iterator' {aka '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFVdW*, std::vector<ForceFields::MMFF::MMFFVdW> >'} changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Params.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Params.cpp:17:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFPBCICollection::MMFFPBCICollection(std::__cxx11::string)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFPBCI*, std::vector<ForceFields::MMFF::MMFFPBCI> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFCovRadPauEleCollection::MMFFCovRadPauEleCollection(std::__cxx11::string)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFCovRadPauEle*, std::vector<ForceFields::MMFF::MMFFCovRadPauEle> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFBndkCollection::MMFFBndkCollection(std::__cxx11::string)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFBond*, std::vector<ForceFields::MMFF::MMFFBond> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFChgCollection::MMFFChgCollection(std::__cxx11::string)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFChg*, std::vector<ForceFields::MMFF::MMFFChg> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
[ 48%] Linking CXX shared module ../../../../rdkit/Chem/rdFingerprintGenerator.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdFingerprintGenerator.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdFingerprintGenerator.so CMakeFiles/rdFingerprintGenerator.dir/FingerprintGeneratorWrapper.cpp.o ../../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
/usr/include/c++/8/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFHerschbachLaurieCollection::MMFFHerschbachLaurieCollection(std::__cxx11::string)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFHerschbachLaurie*, std::vector<ForceFields::MMFF::MMFFHerschbachLaurie> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 48%] Built target rdFingerprintGenerator
make -f Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMolChemicalFeatures
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 48%] Building CXX object Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/rdMolChemicalFeatures.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolChemicalFeatures_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMolChemicalFeatures.dir/rdMolChemicalFeatures.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/Wrap/rdMolChemicalFeatures.cpp
/usr/include/c++/8/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFBondCollection::MMFFBondCollection(std::__cxx11::string)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFBond*, std::vector<ForceFields::MMFF::MMFFBond> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFOopCollection::MMFFOopCollection(bool, std::__cxx11::string)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFOop*, std::vector<ForceFields::MMFF::MMFFOop> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFStbnCollection::MMFFStbnCollection(std::__cxx11::string)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFStbn*, std::vector<ForceFields::MMFF::MMFFStbn> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFAngleCollection::MMFFAngleCollection(std::__cxx11::string)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFAngle*, std::vector<ForceFields::MMFF::MMFFAngle> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFTorCollection::MMFFTorCollection(bool, std::__cxx11::string)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFTor*, std::vector<ForceFields::MMFF::MMFFTor> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In constructor 'ForceFields::MMFF::MMFFVdWCollection::MMFFVdWCollection(std::__cxx11::string)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<ForceFields::MMFF::MMFFVdW*, std::vector<ForceFields::MMFF::MMFFVdW> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/token_functions.hpp:34,
                 from /usr/include/boost/token_iterator.hpp:24,
                 from /usr/include/boost/tokenizer.hpp:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/TDTMolSupplier.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/token_functions.hpp:34,
                 from /usr/include/boost/token_iterator.hpp:24,
                 from /usr/include/boost/tokenizer.hpp:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/TDTMolSupplier.cpp:12:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/token_functions.hpp:34,
                 from /usr/include/boost/token_iterator.hpp:24,
                 from /usr/include/boost/tokenizer.hpp:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/TDTMolSupplier.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'void RDKit::TDTParseUtils::ParseNumberList(std::__cxx11::string, std::vector<T>&, std::istream*) [with T = double]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 48%] Linking CXX shared library ../../lib/libRDKitForceField.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/cmake -E cmake_link_script CMakeFiles/ForceField.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitForceField.so.1 -o ../../lib/libRDKitForceField.so.1.2018.09.1 CMakeFiles/ForceField.dir/ForceField.cpp.o CMakeFiles/ForceField.dir/UFF/AngleBend.cpp.o CMakeFiles/ForceField.dir/UFF/BondStretch.cpp.o CMakeFiles/ForceField.dir/UFF/Nonbonded.cpp.o CMakeFiles/ForceField.dir/UFF/Inversion.cpp.o CMakeFiles/ForceField.dir/UFF/TorsionAngle.cpp.o CMakeFiles/ForceField.dir/UFF/DistanceConstraint.cpp.o CMakeFiles/ForceField.dir/UFF/AngleConstraint.cpp.o CMakeFiles/ForceField.dir/UFF/TorsionConstraint.cpp.o CMakeFiles/ForceField.dir/UFF/PositionConstraint.cpp.o CMakeFiles/ForceField.dir/UFF/Params.cpp.o CMakeFiles/ForceField.dir/MMFF/AngleBend.cpp.o CMakeFiles/ForceField.dir/MMFF/BondStretch.cpp.o CMakeFiles/ForceField.dir/MMFF/StretchBend.cpp.o CMakeFiles/ForceField.dir/MMFF/OopBend.cpp.o CMakeFiles/ForceField.dir/MMFF/TorsionAngle.cpp.o CMakeFiles/ForceField.dir/MMFF/Nonbonded.cpp.o CMakeFiles/ForceField.dir/MMFF/DistanceConstraint.cpp.o CMakeFiles/ForceField.dir/MMFF/AngleConstraint.cpp.o CMakeFiles/ForceField.dir/MMFF/TorsionConstraint.cpp.o CMakeFiles/ForceField.dir/MMFF/PositionConstraint.cpp.o CMakeFiles/ForceField.dir/MMFF/Params.cpp.o ../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/token_functions.hpp:34,
                 from /usr/include/boost/token_iterator.hpp:24,
                 from /usr/include/boost/tokenizer.hpp:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/TDTMolSupplier.cpp:12:
/usr/include/c++/8/bits/stl_vector.h: In member function 'RDKit::ROMol* RDKit::TDTMolSupplier::parseMol(std::__cxx11::string)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/token_functions.hpp:34,
                 from /usr/include/boost/token_iterator.hpp:24,
                 from /usr/include/boost/tokenizer.hpp:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/TDTMolSupplier.cpp:12:
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitForceField.so.1.2018.09.1 ../../lib/libRDKitForceField.so.1 ../../lib/libRDKitForceField.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 48%] Built target ForceField
make -f Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ReducedGraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/DependInfo.cmake --color=
Scanning dependencies of target testReducedGraphs
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 48%] Building CXX object Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/test1.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_REDUCEDGRAPHS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testReducedGraphs.dir/test1.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ReducedGraphs/test1.cpp
[ 48%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TDTWriter.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/TDTWriter.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/TDTWriter.cpp
[ 48%] Linking CXX shared module ../../../rdkit/Chem/rdchem.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdchem.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../rdkit/Chem/rdchem.so CMakeFiles/rdchem.dir/rdchem.cpp.o CMakeFiles/rdchem.dir/Table.cpp.o CMakeFiles/rdchem.dir/Atom.cpp.o CMakeFiles/rdchem.dir/Bond.cpp.o CMakeFiles/rdchem.dir/Mol.cpp.o CMakeFiles/rdchem.dir/Conformer.cpp.o CMakeFiles/rdchem.dir/RingInfo.cpp.o CMakeFiles/rdchem.dir/EditableMol.cpp.o CMakeFiles/rdchem.dir/MonomerInfo.cpp.o CMakeFiles/rdchem.dir/ResonanceMolSupplier.cpp.o CMakeFiles/rdchem.dir/MolBundle.cpp.o ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 48%] Built target rdchem
make -f Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ReducedGraphs/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/DependInfo.cmake --color=
Scanning dependencies of target rdReducedGraphs
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
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make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 48%] Building CXX object Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/rdReducedGraphs.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdReducedGraphs_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdReducedGraphs.dir/rdReducedGraphs.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ReducedGraphs/Wrap/rdReducedGraphs.cpp
[ 48%] Building CXX object Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeature.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolChemicalFeatures_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeature.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/Wrap/MolChemicalFeature.cpp
[ 48%] Linking CXX executable testReducedGraphs
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs && /usr/bin/cmake -E cmake_link_script CMakeFiles/testReducedGraphs.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testReducedGraphs.dir/test1.cpp.o  -o testReducedGraphs ../../../lib/libRDKitReducedGraphs.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 48%] Built target testReducedGraphs
make -f Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/depend
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cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/DependInfo.cmake --color=
Scanning dependencies of target ForceFieldHelpers
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
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make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 49%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/UFF/AtomTyper.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/c++  -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceFieldHelpers.dir/UFF/AtomTyper.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/UFF/AtomTyper.cpp
[ 49%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TplFileParser.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/TplFileParser.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/TplFileParser.cpp
[ 49%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/UFF/Builder.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/c++  -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceFieldHelpers.dir/UFF/Builder.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/UFF/Builder.cpp
[ 49%] Linking CXX shared module ../../../../rdkit/Chem/rdReducedGraphs.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdReducedGraphs.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdReducedGraphs.so CMakeFiles/rdReducedGraphs.dir/rdReducedGraphs.cpp.o ../../../../lib/libRDKitReducedGraphs.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 49%] Built target rdReducedGraphs
[ 49%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TplFileWriter.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/TplFileWriter.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/TplFileWriter.cpp
[ 49%] Building CXX object Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolChemicalFeatures_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/Wrap/MolChemicalFeatureFactory.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/TplFileParser.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/TplFileParser.cpp:12:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/TplFileParser.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/TplFileParser.cpp:12:
/usr/include/c++/8/bits/stl_vector.h: In function 'RDKit::Conformer* RDKit::ParseConfData(std::istream*, unsigned int&, RDKit::RWMol*, unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In function 'void RDKit::ParseTPLAtomLine(std::__cxx11::string, unsigned int, RDKit::RWMol*, RDKit::Conformer*)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 49%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/MMFF/AtomTyper.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/c++  -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceFieldHelpers.dir/MMFF/AtomTyper.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/MMFF/AtomTyper.cpp
[ 49%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/PDBParser.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/PDBParser.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/PDBParser.cpp
[ 49%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/MMFF/Builder.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/c++  -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceFieldHelpers.dir/MMFF/Builder.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/MMFF/Builder.cpp
[ 50%] Building CXX object Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/ChemicalFeatureUtils.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolChemicalFeatures_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMolChemicalFeatures.dir/ChemicalFeatureUtils.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/Wrap/ChemicalFeatureUtils.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/PDBParser.cpp:16:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/PDBParser.cpp:16:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/PDBParser.cpp:16:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/MMFF/AtomTyper.cpp:13:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/math/special_functions/math_fwd.hpp:26,
                 from /usr/include/boost/math/special_functions/sign.hpp:17,
                 from /usr/include/boost/lexical_cast/detail/inf_nan.hpp:34,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical_streams.hpp:63,
                 from /usr/include/boost/lexical_cast/detail/converter_lexical.hpp:54,
                 from /usr/include/boost/lexical_cast/try_lexical_convert.hpp:42,
                 from /usr/include/boost/lexical_cast.hpp:32,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/PDBParser.cpp:16:
/usr/include/c++/8/bits/stl_vector.h: In function 'void RDKit::PDBConformerLine(RDKit::RWMol*, const char*, unsigned int, RDKit::Conformer*&, int&)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In function 'void RDKit::PDBAtomLine(RDKit::RWMol*, const char*, unsigned int, unsigned int, std::map<int, RDKit::Atom*>&)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 51%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/PDBWriter.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/PDBWriter.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/PDBWriter.cpp
[ 51%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionAngleM6.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/c++  -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionAngleM6.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionAngleM6.cpp
[ 51%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionPreferences.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/c++  -DForceFieldHelpers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionPreferences.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.cpp
[ 51%] Linking CXX shared module ../../../../rdkit/Chem/rdMolChemicalFeatures.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolChemicalFeatures.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdMolChemicalFeatures.so CMakeFiles/rdMolChemicalFeatures.dir/rdMolChemicalFeatures.cpp.o CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeature.cpp.o CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o CMakeFiles/rdMolChemicalFeatures.dir/ChemicalFeatureUtils.cpp.o ../../../../lib/libRDKitMolChemicalFeatures.so.1.2018.09.1 ../../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 51%] Built target rdMolChemicalFeatures
[ 51%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/PDBSupplier.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/PDBSupplier.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/PDBSupplier.cpp
[ 51%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/ProximityBonds.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/ProximityBonds.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/ProximityBonds.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.h:13,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In constructor 'ForceFields::CrystalFF::ExpTorsionAngleCollection::ExpTorsionAngleCollection(const string&)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 51%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SequenceParsers.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/SequenceParsers.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SequenceParsers.cpp
[ 51%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SequenceWriters.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/SequenceWriters.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SequenceWriters.cpp
[ 52%] Linking CXX shared library ../../../lib/libRDKitForceFieldHelpers.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/ForceFieldHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitForceFieldHelpers.so.1 -o ../../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 CMakeFiles/ForceFieldHelpers.dir/UFF/AtomTyper.cpp.o CMakeFiles/ForceFieldHelpers.dir/UFF/Builder.cpp.o CMakeFiles/ForceFieldHelpers.dir/MMFF/AtomTyper.cpp.o CMakeFiles/ForceFieldHelpers.dir/MMFF/Builder.cpp.o CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionAngleM6.cpp.o CMakeFiles/ForceFieldHelpers.dir/CrystalFF/TorsionPreferences.cpp.o ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitForceField.so.1.2018.09.1 ../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
[ 52%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SVGParser.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DFileParsers_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FileParsers.dir/SVGParser.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SVGParser.cpp
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1 ../../../lib/libRDKitForceFieldHelpers.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 52%] Built target ForceFieldHelpers
make -f Code/DistGeom/CMakeFiles/DistGeometry.dir/build.make Code/DistGeom/CMakeFiles/DistGeometry.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom/CMakeFiles/DistGeometry.dir/DependInfo.cmake --color=
Scanning dependencies of target DistGeometry
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/DistGeom/CMakeFiles/DistGeometry.dir/build.make Code/DistGeom/CMakeFiles/DistGeometry.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 52%] Building CXX object Code/DistGeom/CMakeFiles/DistGeometry.dir/DistGeomUtils.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/c++  -DDistGeometry_EXPORTS -DRDKIT_DISTGEOMETRY_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/DistGeometry.dir/DistGeomUtils.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/DistGeomUtils.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SequenceParsers.cpp:13:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'RDKit::RWMol* RDKit::FASTAToMol(const char*, bool, int)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 52%] Building CXX object Code/DistGeom/CMakeFiles/DistGeometry.dir/TriangleSmooth.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/c++  -DDistGeometry_EXPORTS -DRDKIT_DISTGEOMETRY_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/DistGeometry.dir/TriangleSmooth.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/TriangleSmooth.cpp
[ 52%] Building CXX object Code/DistGeom/CMakeFiles/DistGeometry.dir/DistViolationContrib.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/c++  -DDistGeometry_EXPORTS -DRDKIT_DISTGEOMETRY_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/DistGeometry.dir/DistViolationContrib.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/DistViolationContrib.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SVGParser.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SVGParser.cpp:10:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SVGParser.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDGeom::Point3D&}; _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
[ 52%] Building CXX object Code/DistGeom/CMakeFiles/DistGeometry.dir/ChiralViolationContrib.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/c++  -DDistGeometry_EXPORTS -DRDKIT_DISTGEOMETRY_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/DistGeometry.dir/ChiralViolationContrib.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/ChiralViolationContrib.cpp
make -f Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/DependInfo.cmake --color=
Scanning dependencies of target MolAlign
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 52%] Building CXX object Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/AlignMolecules.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/c++  -DMolAlign_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLALIGN_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolAlign.dir/AlignMolecules.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/AlignMolecules.cpp
[ 53%] Building CXX object Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/O3AAlignMolecules.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/c++  -DMolAlign_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLALIGN_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolAlign.dir/O3AAlignMolecules.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/O3AAlignMolecules.cpp
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SVGParser.cpp:10:
/usr/include/c++/8/bits/stl_vector.h: In function 'RDKit::RWMol* RDKit::RDKitSVGToMol(std::istream*, bool, bool)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 54%] Linking CXX shared library ../../../lib/libRDKitFileParsers.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/FileParsers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitFileParsers.so.1 -o ../../../lib/libRDKitFileParsers.so.1.2018.09.1 CMakeFiles/FileParsers.dir/Mol2FileParser.cpp.o CMakeFiles/FileParsers.dir/MolFileParser.cpp.o CMakeFiles/FileParsers.dir/MolFileStereochem.cpp.o CMakeFiles/FileParsers.dir/MolFileWriter.cpp.o CMakeFiles/FileParsers.dir/ForwardSDMolSupplier.cpp.o CMakeFiles/FileParsers.dir/SDMolSupplier.cpp.o CMakeFiles/FileParsers.dir/SDWriter.cpp.o CMakeFiles/FileParsers.dir/SmilesMolSupplier.cpp.o CMakeFiles/FileParsers.dir/SmilesWriter.cpp.o CMakeFiles/FileParsers.dir/TDTMolSupplier.cpp.o CMakeFiles/FileParsers.dir/TDTWriter.cpp.o CMakeFiles/FileParsers.dir/TplFileParser.cpp.o CMakeFiles/FileParsers.dir/TplFileWriter.cpp.o CMakeFiles/FileParsers.dir/PDBParser.cpp.o CMakeFiles/FileParsers.dir/PDBWriter.cpp.o CMakeFiles/FileParsers.dir/PDBSupplier.cpp.o CMakeFiles/FileParsers.dir/ProximityBonds.cpp.o CMakeFiles/FileParsers.dir/SequenceParsers.cpp.o CMakeFiles/FileParsers.dir/SequenceWriters.cpp.o CMakeFiles/FileParsers.dir/SVGParser.cpp.o ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1 ../../../lib/libRDKitFileParsers.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 54%] Built target FileParsers
make -f Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build.make Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/DependInfo.cmake --color=
Scanning dependencies of target rdForceField
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build.make Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 54%] Building CXX object Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/ForceField.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdForceField_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdForceField.dir/ForceField.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/Wrap/ForceField.cpp
[ 55%] Linking CXX shared library ../../lib/libRDKitDistGeometry.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/cmake -E cmake_link_script CMakeFiles/DistGeometry.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitDistGeometry.so.1 -o ../../lib/libRDKitDistGeometry.so.1.2018.09.1 CMakeFiles/DistGeometry.dir/DistGeomUtils.cpp.o CMakeFiles/DistGeometry.dir/TriangleSmooth.cpp.o CMakeFiles/DistGeometry.dir/DistViolationContrib.cpp.o CMakeFiles/DistGeometry.dir/ChiralViolationContrib.cpp.o ../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../lib/libRDKitForceField.so.1.2018.09.1 ../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/cmake -E cmake_symlink_library ../../lib/libRDKitDistGeometry.so.1.2018.09.1 ../../lib/libRDKitDistGeometry.so.1 ../../lib/libRDKitDistGeometry.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 55%] Built target DistGeometry
make -f Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/DependInfo.cmake --color=
Scanning dependencies of target graphmolMolOpsTest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 56%] Building CXX object Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/molopstest.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/graphmolMolOpsTest.dir/molopstest.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/molopstest.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Vector.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Matrix.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/SquareMatrix.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Transform3D.h:16,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/AlignMolecules.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/AlignMolecules.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
make -f Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/DependInfo.cmake --color=
Scanning dependencies of target graphmolTestsCatch
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 56%] Building CXX object Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/catch_tests.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/graphmolTestsCatch.dir/catch_tests.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/catch_tests.cpp
[ 56%] Linking CXX shared library ../../../lib/libRDKitMolAlign.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolAlign.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitMolAlign.so.1 -o ../../../lib/libRDKitMolAlign.so.1.2018.09.1 CMakeFiles/MolAlign.dir/AlignMolecules.cpp.o CMakeFiles/MolAlign.dir/O3AAlignMolecules.cpp.o ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitAlignment.so.1.2018.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitForceField.so.1.2018.09.1 ../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolAlign.so.1.2018.09.1 ../../../lib/libRDKitMolAlign.so.1 ../../../lib/libRDKitMolAlign.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 56%] Built target MolAlign
make -f Code/GraphMol/CMakeFiles/graphmolTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolTest1.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolTest1.dir/DependInfo.cmake --color=
Scanning dependencies of target graphmolTest1
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolTest1.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 56%] Building CXX object Code/GraphMol/CMakeFiles/graphmolTest1.dir/test1.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/graphmolTest1.dir/test1.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/test1.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/molopstest.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/molopstest.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/molopstest.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/Wrap/ForceField.cpp: In member function 'double ForceFields::PyForceField::calcEnergyWithPos(const boost::python::api::object&)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/Wrap/ForceField.cpp:135:12: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       c[i] = python::extract<double>(pos[i]);
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/Wrap/ForceField.cpp: In member function 'PyObject* ForceFields::PyForceField::calcGradWithPos(const boost::python::api::object&)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/Wrap/ForceField.cpp:169:12: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       c[i] = python::extract<double>(pos[i]);
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/test1.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:159:5: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/test1.cpp:12:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/test1.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/test1.cpp:12:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void RDKit::RDProps::clearProp(const string&) const':
/usr/include/c++/8/bits/stl_vector.h:1318:58: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
       { return _M_erase(begin() + (__position - cbegin())); }
                                                          ^
/usr/include/c++/8/bits/stl_vector.h: In member function 'void RDKit::RDProps::clearComputedProps() const':
/usr/include/c++/8/bits/stl_vector.h:1318:58: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
       { return _M_erase(begin() + (__position - cbegin())); }
                                                          ^
[ 56%] Linking CXX shared module ../../../rdkit/ForceField/rdForceField.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdForceField.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../rdkit/ForceField/rdForceField.so CMakeFiles/rdForceField.dir/ForceField.cpp.o ../../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../lib/libRDKitForceField.so.1.2018.09.1 ../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 56%] Built target rdForceField
make -f Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/DependInfo.cmake --color=
Scanning dependencies of target graphmoltestPicklerGlobalSetting
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 56%] Building CXX object Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/testPicklerGlobalSettings.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/graphmoltestPicklerGlobalSetting.dir/testPicklerGlobalSettings.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/testPicklerGlobalSettings.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include/catch.hpp:465,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/catch_tests.cpp:3:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include/catch.hpp:465,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/catch_tests.cpp:3:
/usr/include/c++/8/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include/catch.hpp:465,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/catch_tests.cpp:3:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/molopstest.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In function 'void testAddHsCoords()':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 56%] Linking CXX executable graphmolTest1
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolTest1.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/graphmolTest1.dir/test1.cpp.o  -o graphmolTest1 ../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../lib/libRDKitForceField.so.1.2018.09.1 ../../lib/libRDKitDepictor.so.1.2018.09.1 ../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 56%] Built target graphmolTest1
make -f Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/DependInfo.cmake --color=
Scanning dependencies of target graphmoltestChirality
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 57%] Building CXX object Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/testChirality.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/graphmoltestChirality.dir/testChirality.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/testChirality.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/testPicklerGlobalSettings.cpp:33:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/molopstest.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void RDKit::Dict::setPODVal(const string&, T) [with T = int]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 57%] Linking CXX executable graphmoltestPicklerGlobalSetting
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmoltestPicklerGlobalSetting.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/graphmoltestPicklerGlobalSetting.dir/testPicklerGlobalSettings.cpp.o  -o graphmoltestPicklerGlobalSetting ../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../lib/libRDKitDepictor.so.1.2018.09.1 ../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 57%] Built target graphmoltestPicklerGlobalSetting
make -f Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/DependInfo.cmake --color=
Scanning dependencies of target graphmoltestPickler
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 57%] Building CXX object Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/testPickler.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/graphmoltestPickler.dir/testPickler.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/testPickler.cpp
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/molopstest.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In function 'void testAddConformers()':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In function 'void testIssue212()':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'void ____C_A_T_C_H____T_E_S_T____7()':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/testPickler.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/testPickler.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/testPickler.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 57%] Linking CXX executable graphmolTestsCatch
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolTestsCatch.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/graphmolTestsCatch.dir/catch_tests.cpp.o  -o graphmolTestsCatch ../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../lib/libRDKitDepictor.so.1.2018.09.1 ../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 57%] Built target graphmolTestsCatch
make -f Code/GraphMol/CMakeFiles/molBundleTest.dir/build.make Code/GraphMol/CMakeFiles/molBundleTest.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/molBundleTest.dir/DependInfo.cmake --color=
Scanning dependencies of target molBundleTest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/molBundleTest.dir/build.make Code/GraphMol/CMakeFiles/molBundleTest.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 57%] Building CXX object Code/GraphMol/CMakeFiles/molBundleTest.dir/testMolBundle.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/molBundleTest.dir/testMolBundle.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/testMolBundle.cpp
[ 57%] Linking CXX executable graphmoltestPickler
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmoltestPickler.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/graphmoltestPickler.dir/testPickler.cpp.o  -o graphmoltestPickler ../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../lib/libRDKitDepictor.so.1.2018.09.1 ../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 57%] Built target graphmoltestPickler
make -f Code/GraphMol/CMakeFiles/hanoiTest.dir/build.make Code/GraphMol/CMakeFiles/hanoiTest.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/hanoiTest.dir/DependInfo.cmake --color=
Scanning dependencies of target hanoiTest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/hanoiTest.dir/build.make Code/GraphMol/CMakeFiles/hanoiTest.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 58%] Building CXX object Code/GraphMol/CMakeFiles/hanoiTest.dir/hanoitest.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/hanoiTest.dir/hanoitest.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/hanoitest.cpp
[ 58%] Linking CXX executable graphmoltestChirality
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmoltestChirality.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/graphmoltestChirality.dir/testChirality.cpp.o  -o graphmoltestChirality ../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../lib/libRDKitDepictor.so.1.2018.09.1 ../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 58%] Built target graphmoltestChirality
make -f Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/build.make Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/DependInfo.cmake --color=
Scanning dependencies of target resMolSupplierTest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/build.make Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 58%] Building CXX object Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/resMolSupplierTest.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_GRAPHMOL_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/resMolSupplierTest.dir/resMolSupplierTest.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/resMolSupplierTest.cpp
[ 59%] Linking CXX executable molBundleTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/molBundleTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/molBundleTest.dir/testMolBundle.cpp.o  -o molBundleTest ../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../lib/libRDKitDepictor.so.1.2018.09.1 ../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 59%] Built target molBundleTest
make -f Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/DependInfo.cmake --color=
Scanning dependencies of target testDepictor
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 59%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/testDepictor.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/c++  -DRDKIT_DEPICTOR_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testDepictor.dir/testDepictor.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/testDepictor.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/new_canon.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/hanoitest.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'void test7()':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/set:60,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/SetQuery.h:13,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:29,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/testDepictor.cpp:13:
/usr/include/c++/8/bits/stl_tree.h: In member function 'void std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_erase_aux(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator) [with _Key = int; _Val = std::pair<const int, RDGeom::Point2D>; _KeyOfValue = std::_Select1st<std::pair<const int, RDGeom::Point2D> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]':
/usr/include/c++/8/bits/stl_tree.h:2486:5: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
     _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 59%] Linking CXX executable graphmolMolOpsTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/graphmolMolOpsTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/graphmolMolOpsTest.dir/molopstest.cpp.o  -o graphmolMolOpsTest ../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../lib/libRDKitDepictor.so.1.2018.09.1 ../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 59%] Built target graphmolMolOpsTest
make -f Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build.make Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/DependInfo.cmake --color=
Scanning dependencies of target rdDepictor
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build.make Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 59%] Building CXX object Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/rdDepictor.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdDepictor_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdDepictor.dir/rdDepictor.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/Wrap/rdDepictor.cpp
[ 59%] Linking CXX executable hanoiTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/hanoiTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/hanoiTest.dir/hanoitest.cpp.o  -o hanoiTest ../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../lib/libRDKitDepictor.so.1.2018.09.1 ../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 59%] Built target hanoiTest
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/DependInfo.cmake --color=
Scanning dependencies of target smiTest1
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 59%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/test.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/smiTest1.dir/test.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/test.cpp
[ 59%] Linking CXX executable resMolSupplierTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol && /usr/bin/cmake -E cmake_link_script CMakeFiles/resMolSupplierTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/resMolSupplierTest.dir/resMolSupplierTest.cpp.o  -o resMolSupplierTest ../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../lib/libRDKitDepictor.so.1.2018.09.1 ../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 59%] Built target resMolSupplierTest
make -f Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/DependInfo.cmake --color=
Scanning dependencies of target cxsmilesTest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 60%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/cxsmiles_test.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/cxsmilesTest.dir/cxsmiles_test.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/cxsmiles_test.cpp
/usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDGeom::Point2D>; _KeyOfValue = std::_Select1st<std::pair<const int, RDGeom::Point2D> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:61,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:26,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/testDepictor.cpp:13:
/usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](std::map<_Key, _Tp, _Compare, _Alloc>::key_type&&) [with _Key = int; _Tp = RDGeom::Point2D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point2D> >]':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/8/set:60,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/SetQuery.h:13,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:29,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/testDepictor.cpp:13:
/usr/include/c++/8/bits/stl_tree.h: In function 'void test4()':
/usr/include/c++/8/bits/stl_tree.h:1141:2: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  _M_erase_aux(__position);
  ^~~~~~~~~~~~
/usr/include/c++/8/bits/stl_tree.h:1141:2: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  _M_erase_aux(__position);
  ^~~~~~~~~~~~
/usr/include/c++/8/bits/stl_tree.h:1141:2: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
  _M_erase_aux(__position);
  ^~~~~~~~~~~~
In file included from /usr/include/c++/8/map:61,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:26,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/testDepictor.cpp:13:
/usr/include/c++/8/bits/stl_map.h: In function 'void testIssue2091304()':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In function 'void testIssue3122141()':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In function 'void testIssue2303566()':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In function 'void testIssue3135833()':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point2D>, std::_Select1st<std::pair<const int, RDGeom::Point2D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point2D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point2D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 60%] Linking CXX executable testDepictor
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDepictor.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testDepictor.dir/testDepictor.cpp.o  -o testDepictor ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 60%] Built target testDepictor
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/DependInfo.cmake --color=
Scanning dependencies of target smiTestCatch
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 60%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/catch_tests.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SMILESPARSE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/smiTestCatch.dir/catch_tests.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/catch_tests.cpp
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/Wrap/rdDepictor.cpp: In function 'void RDDepict::setPreferCoordGen(bool)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/Wrap/rdDepictor.cpp:131:29: warning: unused parameter 'value' [-Wunused-parameter]
 void setPreferCoordGen(bool value) {
                        ~~~~~^~~~~
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/RDDepictor.h:16,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/Wrap/rdDepictor.cpp:17:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h: In function 'unsigned int RDDepict::Compute2DCoords(RDKit::ROMol&, bool, bool, boost::python::dict&, unsigned int, unsigned int, int, bool, double, bool)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:289:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point2D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
     x = other.x;
         ~~~~~~^
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/test.cpp:13:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
[ 60%] Linking CXX executable cxsmilesTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/cxsmilesTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/cxsmilesTest.dir/cxsmiles_test.cpp.o  -o cxsmilesTest ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 60%] Built target cxsmilesTest
make -f Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/DependInfo.cmake --color=
Scanning dependencies of target testMol2ToMol
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 60%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/testMol2ToMol.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testMol2ToMol.dir/testMol2ToMol.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/testMol2ToMol.cpp
[ 61%] Linking CXX shared module ../../../../rdkit/Chem/rdDepictor.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdDepictor.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdDepictor.so CMakeFiles/rdDepictor.dir/rdDepictor.cpp.o ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 61%] Built target rdDepictor
make -f Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/DependInfo.cmake --color=
Scanning dependencies of target testTplParser
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 61%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/testTpls.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testTplParser.dir/testTpls.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/testTpls.cpp
[ 61%] Linking CXX executable testMol2ToMol
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMol2ToMol.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testMol2ToMol.dir/testMol2ToMol.cpp.o  -o testMol2ToMol ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 61%] Built target testMol2ToMol
make -f Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/DependInfo.cmake --color=
Scanning dependencies of target testMolWriter
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 61%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/testMolWriter.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testMolWriter.dir/testMolWriter.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/testMolWriter.cpp
[ 61%] Linking CXX executable testTplParser
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testTplParser.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testTplParser.dir/testTpls.cpp.o  -o testTplParser ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 61%] Built target testTplParser
make -f Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/DependInfo.cmake --color=
Scanning dependencies of target testMolSupplier
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 61%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/testMolSupplier.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testMolSupplier.dir/testMolSupplier.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/testMolSupplier.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/testMolWriter.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/testMolWriter.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/testMolWriter.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'void testBug3525799()':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/testMolSupplier.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const std::fpos<__mbstate_t>&}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include/catch.hpp:465,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/catch_tests.cpp:3:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include/catch.hpp:465,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/catch_tests.cpp:3:
/usr/include/c++/8/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'void testGitHub23()':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/testMolSupplier.cpp:12:
/usr/include/c++/8/bits/stl_vector.h: In function 'void testSetStreamIndices()':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/testMolWriter.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In function 'void testIssue265()':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 61%] Linking CXX executable testMolWriter
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolWriter.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testMolWriter.dir/testMolWriter.cpp.o  -o testMolWriter ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 61%] Built target testMolWriter
make -f Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/DependInfo.cmake --color=
Scanning dependencies of target testSequence
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 62%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/testSequence.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testSequence.dir/testSequence.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/testSequence.cpp
[ 62%] Linking CXX executable smiTest1
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/smiTest1.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/smiTest1.dir/test.cpp.o  -o smiTest1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 62%] Built target smiTest1
make -f Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/DependInfo.cmake --color=
Scanning dependencies of target testExtendedStereoParsing
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
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make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 63%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/testExtendedStereoParsing.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testExtendedStereoParsing.dir/testExtendedStereoParsing.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/testExtendedStereoParsing.cpp
[ 63%] Linking CXX executable testMolSupplier
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolSupplier.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testMolSupplier.dir/testMolSupplier.cpp.o  -o testMolSupplier ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 63%] Built target testMolSupplier
make -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/DependInfo.cmake --color=
Scanning dependencies of target fileParsersTest1
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
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make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 63%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/test1.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/fileParsersTest1.dir/test1.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/test1.cpp
[ 63%] Linking CXX executable testSequence
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSequence.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testSequence.dir/testSequence.cpp.o  -o testSequence ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 63%] Built target testSequence
make -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/DependInfo.cmake --color=
Scanning dependencies of target fileParsersCatchTest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
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make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 63%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/catch_tests.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FILEPARSERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/fileParsersCatchTest.dir/catch_tests.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/catch_tests.cpp
[ 63%] Linking CXX executable testExtendedStereoParsing
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testExtendedStereoParsing.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testExtendedStereoParsing.dir/testExtendedStereoParsing.cpp.o  -o testExtendedStereoParsing ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 63%] Built target testExtendedStereoParsing
make -f Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Substruct /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/DependInfo.cmake --color=
Scanning dependencies of target testSubstructMatch
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make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 64%] Building CXX object Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/test1.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBSTRUCTMATCH_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testSubstructMatch.dir/test1.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Substruct/test1.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/test1.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/test1.cpp:12:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/test1.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
[ 64%] Linking CXX executable smiTestCatch
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse && /usr/bin/cmake -E cmake_link_script CMakeFiles/smiTestCatch.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/smiTestCatch.dir/catch_tests.cpp.o  -o smiTestCatch ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 64%] Built target smiTestCatch
make -f Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/DependInfo.cmake --color=
Scanning dependencies of target Descriptors
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 64%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/Crippen.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Descriptors.dir/Crippen.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Crippen.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Substruct/test1.cpp:17:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/GraphMol.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Crippen.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDKit::Descriptors::CrippenParams&}; _Tp = RDKit::Descriptors::CrippenParams; _Alloc = std::allocator<RDKit::Descriptors::CrippenParams>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Descriptors::CrippenParams>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Descriptors::CrippenParams*, std::vector<RDKit::Descriptors::CrippenParams> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'void test5QueryRoot()':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/GraphMol.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Crippen.cpp:12:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Descriptors::CrippenParamCollection::CrippenParamCollection(const string&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Descriptors::CrippenParams*, std::vector<RDKit::Descriptors::CrippenParams> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
[ 64%] Linking CXX executable testSubstructMatch
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct && /usr/bin/cmake -E cmake_link_script CMakeFiles/testSubstructMatch.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testSubstructMatch.dir/test1.cpp.o  -o testSubstructMatch ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 64%] Built target testSubstructMatch
make -f Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/DependInfo.cmake --color=
Scanning dependencies of target testChemTransforms
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 65%] Building CXX object Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/testChemTransforms.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/c++  -DRDKIT_CHEMTRANSFORMS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testChemTransforms.dir/testChemTransforms.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/testChemTransforms.cpp
[ 65%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MolDescriptors.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Descriptors.dir/MolDescriptors.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/MolDescriptors.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include/catch.hpp:465,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/catch_tests.cpp:13:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include/catch.hpp:465,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/catch_tests.cpp:13:
/usr/include/c++/8/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
[ 65%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MolSurf.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Descriptors.dir/MolSurf.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/MolSurf.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/testChemTransforms.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/MolSurf.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, const char*)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 66%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/Lipinski.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Descriptors.dir/Lipinski.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Lipinski.cpp
/usr/include/c++/8/bits/vector.tcc: In function 'void testMolFileAtomValues()':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 66%] Linking CXX executable testChemTransforms
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms && /usr/bin/cmake -E cmake_link_script CMakeFiles/testChemTransforms.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testChemTransforms.dir/testChemTransforms.cpp.o  -o testChemTransforms ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 66%] Built target testChemTransforms
make -f Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/DependInfo.cmake --color=
Scanning dependencies of target filterCatalogTest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 67%] Building CXX object Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/filtercatalogtest.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FILTERCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/filterCatalogTest.dir/filtercatalogtest.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/filtercatalogtest.cpp
[ 67%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/ConnectivityDescriptors.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Descriptors.dir/ConnectivityDescriptors.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/ConnectivityDescriptors.cpp
[ 67%] Linking CXX executable fileParsersCatchTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/fileParsersCatchTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/fileParsersCatchTest.dir/catch_tests.cpp.o  -o fileParsersCatchTest ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 67%] Built target fileParsersCatchTest
make -f Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build.make Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/DependInfo.cmake --color=
Scanning dependencies of target rdfiltercatalog
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build.make Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 68%] Building CXX object Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/rdfiltercatalog.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfiltercatalog_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdfiltercatalog.dir/rdfiltercatalog.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/Wrap/rdfiltercatalog.cpp
[ 68%] Linking CXX executable fileParsersTest1
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers && /usr/bin/cmake -E cmake_link_script CMakeFiles/fileParsersTest1.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/fileParsersTest1.dir/test1.cpp.o  -o fileParsersTest1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 68%] Built target fileParsersTest1
make -f Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/DependInfo.cmake --color=
Scanning dependencies of target testFragCatalog
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 69%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/test1.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FRAGCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testFragCatalog.dir/test1.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/test1.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/filtercatalogtest.cpp:33:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void RDKit::Dict::setVal(const string&, const char*)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'void testFilterCatalogEntry()':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/graph/adjacency_list.hpp:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:27,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/GraphMol.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/ConnectivityDescriptors.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 69%] Linking CXX executable filterCatalogTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/filterCatalogTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/filterCatalogTest.dir/filtercatalogtest.cpp.o  -o filterCatalogTest ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 69%] Built target filterCatalogTest
make -f Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build.make Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/DependInfo.cmake --color=
Scanning dependencies of target rdfragcatalog
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build.make Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 69%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/rdfragcatalog.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfragcatalog_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdfragcatalog.dir/rdfragcatalog.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/Wrap/rdfragcatalog.cpp
[ 69%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MQN.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Descriptors.dir/MQN.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/MQN.cpp
[ 69%] Building CXX object Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/FilterCatalog.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfiltercatalog_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdfiltercatalog.dir/FilterCatalog.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/Wrap/FilterCatalog.cpp
[ 69%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/Property.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Descriptors.dir/Property.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Property.cpp
[ 69%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragCatalog.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfragcatalog_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdfragcatalog.dir/FragCatalog.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/Wrap/FragCatalog.cpp
[ 69%] Linking CXX executable testFragCatalog
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFragCatalog.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testFragCatalog.dir/test1.cpp.o  -o testFragCatalog ../../../lib/libRDKitFragCatalog.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 69%] Built target testFragCatalog
make -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/DependInfo.cmake --color=
Scanning dependencies of target testFingerprints
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 69%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/test1.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testFingerprints.dir/test1.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/test1.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Property.h:36,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Property.cpp:32:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'std::vector<double> RDKit::Descriptors::Properties::computeProperties(const RDKit::ROMol&, bool) const':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void RDKit::Descriptors::Properties::annotateProperties(RDKit::ROMol&) const':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 69%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/AUTOCORR2D.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Descriptors.dir/AUTOCORR2D.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/AUTOCORR2D.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/Wrap/FragCatalog.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/test1.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
[ 69%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/Data3Ddescriptors.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Descriptors.dir/Data3Ddescriptors.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Data3Ddescriptors.cpp
[ 70%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MolData3Ddescriptors.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Descriptors.dir/MolData3Ddescriptors.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/MolData3Ddescriptors.cpp
[ 70%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragCatParams.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfragcatalog_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdfragcatalog.dir/FragCatParams.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/Wrap/FragCatParams.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/Wrap/FilterCatalog.cpp:31:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void RDKit::RDProps::clearProp(const string&) const':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void RDKit::FilterCatalogEntry::setProp(const string&, T) [with T = std::__cxx11::basic_string<char>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 70%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/USRDescriptor.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DDescriptors_EXPORTS -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/Descriptors.dir/USRDescriptor.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/USRDescriptor.cpp
[ 71%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragCatGenerator.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfragcatalog_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdfragcatalog.dir/FragCatGenerator.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/Wrap/FragCatGenerator.cpp
[ 71%] Linking CXX shared library ../../../lib/libRDKitDescriptors.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/Descriptors.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitDescriptors.so.1 -o ../../../lib/libRDKitDescriptors.so.1.2018.09.1 CMakeFiles/Descriptors.dir/Crippen.cpp.o CMakeFiles/Descriptors.dir/MolDescriptors.cpp.o CMakeFiles/Descriptors.dir/MolSurf.cpp.o CMakeFiles/Descriptors.dir/Lipinski.cpp.o CMakeFiles/Descriptors.dir/ConnectivityDescriptors.cpp.o CMakeFiles/Descriptors.dir/MQN.cpp.o CMakeFiles/Descriptors.dir/Property.cpp.o CMakeFiles/Descriptors.dir/AUTOCORR2D.cpp.o CMakeFiles/Descriptors.dir/Data3Ddescriptors.cpp.o CMakeFiles/Descriptors.dir/MolData3Ddescriptors.cpp.o CMakeFiles/Descriptors.dir/USRDescriptor.cpp.o ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1 ../../../lib/libRDKitDescriptors.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 71%] Built target Descriptors
make -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/DependInfo.cmake --color=
Scanning dependencies of target testFingerprintGenerators
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 71%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/testFingerprintGenerators.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FINGERPRINTS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testFingerprintGenerators.dir/testFingerprintGenerators.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp
[ 71%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragFPGenerator.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdfragcatalog_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdfragcatalog.dir/FragFPGenerator.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/Wrap/FragFPGenerator.cpp
[ 71%] Linking CXX shared module ../../../../rdkit/Chem/rdfiltercatalog.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdfiltercatalog.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdfiltercatalog.so CMakeFiles/rdfiltercatalog.dir/rdfiltercatalog.cpp.o CMakeFiles/rdfiltercatalog.dir/FilterCatalog.cpp.o ../../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 71%] Built target rdfiltercatalog
make -f Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolTransforms /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/DependInfo.cmake --color=
Scanning dependencies of target testMolTransforms
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 72%] Building CXX object Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/test1.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLTRANSFORMS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testMolTransforms.dir/test1.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolTransforms/test1.cpp
[ 72%] Linking CXX executable testFingerprints
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFingerprints.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testFingerprints.dir/test1.cpp.o  -o testFingerprints ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp:12:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp: In function 'void testAtomPairNonSparseBitvector()':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp:225:42: warning: comparison of integer expressions of different signedness: 'int' and '__gnu_cxx::__alloc_traits<std::allocator<unsigned int>, unsigned int>::value_type' {aka 'unsigned int'} [-Wsign-compare]
         TEST_ASSERT(isSet == (it->second >= defaultCountBounds[i]));
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Invariant.h:152:9: note: in definition of macro 'TEST_ASSERT'
   if (!(expr)) {                                                      \
         ^~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp:242:42: warning: comparison of integer expressions of different signedness: 'int' and '__gnu_cxx::__alloc_traits<std::allocator<unsigned int>, unsigned int>::value_type' {aka 'unsigned int'} [-Wsign-compare]
         TEST_ASSERT(isSet == (it->second >= defaultCountBounds[i]));
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Invariant.h:152:9: note: in definition of macro 'TEST_ASSERT'
   if (!(expr)) {                                                      \
         ^~~~
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 72%] Built target testFingerprints
make -f Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/DependInfo.cmake --color=
Scanning dependencies of target rdForceFieldHelpers
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 72%] Building CXX object Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/rdForceFields.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdForceFieldHelpers_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdForceFieldHelpers.dir/rdForceFields.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/Wrap/rdForceFields.cpp
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp: In function 'void testBulkFP()':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp:2388:23: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<RDKit::SparseIntVect<long long unsigned int>*>::size_type' {aka 'unsigned int'} [-Wsign-compare]
     for (int i = 0; i < results->size(); i++) {
                     ~~^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/algorithm:62,
                 from /usr/include/boost/iterator/iterator_concepts.hpp:26,
                 from /usr/include/boost/range/concepts.hpp:20,
                 from /usr/include/boost/range/size_type.hpp:20,
                 from /usr/include/boost/range/size.hpp:21,
                 from /usr/include/boost/range/functions.hpp:20,
                 from /usr/include/boost/range/iterator_range_core.hpp:38,
                 from /usr/include/boost/range/iterator_range.hpp:13,
                 from /usr/include/boost/iostreams/traits.hpp:38,
                 from /usr/include/boost/iostreams/detail/call_traits.hpp:15,
                 from /usr/include/boost/iostreams/detail/adapter/device_adapter.hpp:22,
                 from /usr/include/boost/iostreams/tee.hpp:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDLog.h:17,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp:11:
/usr/include/c++/8/bits/stl_algo.h: In function '_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const unsigned int>]':
/usr/include/c++/8/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
     __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last,
     ^~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolTransforms/test1.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h: In function 'void testAtomPairOutput()':
/usr/include/c++/8/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
       return __find_if(__first, __last, __pred,
              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
          std::__iterator_category(__first));
          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
       return __find_if(__first, __last, __pred,
              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
          std::__iterator_category(__first));
          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
       return __find_if(__first, __last, __pred,
              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
          std::__iterator_category(__first));
          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
       return __find_if(__first, __last, __pred,
              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
          std::__iterator_category(__first));
          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
       return __find_if(__first, __last, __pred,
              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
          std::__iterator_category(__first));
          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
       return __find_if(__first, __last, __pred,
              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
          std::__iterator_category(__first));
          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolTransforms/test1.cpp:12:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In function 'void test1Canonicalization()':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 72%] Linking CXX executable testMolTransforms
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolTransforms.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testMolTransforms.dir/test1.cpp.o  -o testMolTransforms ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 72%] Built target testMolTransforms
make -f Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build.make Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMolAlign
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build.make Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 72%] Linking CXX shared module ../../../../rdkit/Chem/rdfragcatalog.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdfragcatalog.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdfragcatalog.so CMakeFiles/rdfragcatalog.dir/rdfragcatalog.cpp.o CMakeFiles/rdfragcatalog.dir/FragCatalog.cpp.o CMakeFiles/rdfragcatalog.dir/FragCatParams.cpp.o CMakeFiles/rdfragcatalog.dir/FragCatGenerator.cpp.o CMakeFiles/rdfragcatalog.dir/FragFPGenerator.cpp.o ../../../../lib/libRDKitFragCatalog.so.1.2018.09.1 ../../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
[ 72%] Building CXX object Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/rdMolAlign.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolAlign_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMolAlign.dir/rdMolAlign.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 72%] Built target rdfragcatalog
make -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/DependInfo.cmake --color=
Scanning dependencies of target testFeatures
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 73%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/testFeatures.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLCHEMICALFEATURES_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testFeatures.dir/testFeatures.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/testFeatures.cpp
[ 73%] Linking CXX shared module ../../../../rdkit/Chem/rdForceFieldHelpers.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdForceFieldHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdForceFieldHelpers.so CMakeFiles/rdForceFieldHelpers.dir/rdForceFields.cpp.o ../../../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitForceField.so.1.2018.09.1 ../../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
In file included from /usr/include/c++/8/set:60,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/SetQuery.h:13,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:29,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp:12:
/usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const long long unsigned int&>, std::tuple<>}; _Key = long long unsigned int; _Val = std::pair<const long long unsigned int, int>; _KeyOfValue = std::_Select1st<std::pair<const long long unsigned int, int> >; _Compare = std::less<long long unsigned int>; _Alloc = std::allocator<std::pair<const long long unsigned int, int> >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, int>, std::_Select1st<std::pair<const long long unsigned int, int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, int> >'} changed in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
In file included from /usr/include/c++/8/map:61,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:26,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/testFingerprintGenerators.cpp:12:
/usr/include/c++/8/bits/stl_map.h: In function 'void testRDKitFP()':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, int>, std::_Select1st<std::pair<const long long unsigned int, int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, int> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 73%] Built target rdForceFieldHelpers
make -f Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/DependInfo.cmake --color=
Scanning dependencies of target testShapeHelpers
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 73%] Building CXX object Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/testShapeHelpers.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SHAPEHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testShapeHelpers.dir/testShapeHelpers.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers/testShapeHelpers.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/testFeatures.cpp:16:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/testFeatures.cpp:16:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_map.h: In function 'void testTopologicalTorsionFPOld()':
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<long long unsigned int, std::pair<const long long unsigned int, int>, std::_Select1st<std::pair<const long long unsigned int, int> >, std::less<long long unsigned int>, std::allocator<std::pair<const long long unsigned int, int> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const long long unsigned int, int> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp: In function 'RDKit::MolAlign::PyO3A* RDKit::MolAlign::getCrippenO3A(RDKit::ROMol&, RDKit::ROMol&, boost::python::list, boost::python::list, int, int, bool, unsigned int, unsigned int, boost::python::list, boost::python::list)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp:451:40: warning: comparison of integer expressions of different signedness: 'boost::python::ssize_t' {aka 'int'} and 'unsigned int' [-Wsign-compare]
       (python::len(prbCrippenContribs) == prbNAtoms)) {
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp:466:40: warning: comparison of integer expressions of different signedness: 'boost::python::ssize_t' {aka 'int'} and 'unsigned int' [-Wsign-compare]
       (python::len(refCrippenContribs) == refNAtoms)) {
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp: In function 'boost::python::tuple RDKit::MolAlign::getCrippenO3AForConfs(RDKit::ROMol&, RDKit::ROMol&, int, boost::python::list, boost::python::list, int, bool, unsigned int, unsigned int, boost::python::list, boost::python::list)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp:532:40: warning: comparison of integer expressions of different signedness: 'boost::python::ssize_t' {aka 'int'} and 'unsigned int' [-Wsign-compare]
       (python::len(prbCrippenContribs) == prbNAtoms)) {
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp:547:40: warning: comparison of integer expressions of different signedness: 'boost::python::ssize_t' {aka 'int'} and 'unsigned int' [-Wsign-compare]
       (python::len(refCrippenContribs) == refNAtoms)) {
        ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
[ 73%] Linking CXX executable testFingerprintGenerators
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFingerprintGenerators.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testFingerprintGenerators.dir/testFingerprintGenerators.cpp.o  -o testFingerprintGenerators ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 73%] Built target testFingerprintGenerators
make -f Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/DependInfo.cmake --color=
Scanning dependencies of target testMolCatalog
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 74%] Building CXX object Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/test1.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLCATALOG_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testMolCatalog.dir/test1.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolCatalog/test1.cpp
[ 74%] Linking CXX executable testFeatures
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFeatures.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testFeatures.dir/testFeatures.cpp.o  -o testFeatures ../../../lib/libRDKitMolChemicalFeatures.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 74%] Built target testFeatures
make -f Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build.make Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolCatalog/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMolCatalog
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build.make Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 74%] Building CXX object Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/rdMolCatalog.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolCatalog_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMolCatalog.dir/rdMolCatalog.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolCatalog/Wrap/rdMolCatalog.cpp
[ 74%] Linking CXX executable testShapeHelpers
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testShapeHelpers.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testShapeHelpers.dir/testShapeHelpers.cpp.o  -o testShapeHelpers ../../../lib/libRDKitShapeHelpers.so.1.2018.09.1 ../../../lib/libRDKitMolAlign.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitAlignment.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitForceField.so.1.2018.09.1 ../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 74%] Built target testShapeHelpers
make -f Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/DependInfo.cmake --color=
Scanning dependencies of target FMCS
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 74%] Building CXX object Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/FMCS.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/c++  -DFMCS_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FMCS.dir/FMCS.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/FMCS.cpp
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp:24:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h: In function 'RDNumeric::DoubleVector* RDKit::_translateWeights(boost::python::api::object)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h:68:9: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       T res = python::extract<T>(d_seq[which]);
         ^~~
[ 75%] Linking CXX shared module ../../../../rdkit/Chem/rdMolAlign.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolAlign.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdMolAlign.so CMakeFiles/rdMolAlign.dir/rdMolAlign.cpp.o ../../../../lib/libRDKitMolAlign.so.1.2018.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../../../lib/libRDKitForceField.so.1.2018.09.1 ../../../../lib/libRDKitAlignment.so.1.2018.09.1 ../../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 75%] Built target rdMolAlign
[ 75%] Building CXX object Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/Seed.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/c++  -DFMCS_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FMCS.dir/Seed.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Seed.cpp
[ 75%] Linking CXX executable testMolCatalog
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolCatalog.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testMolCatalog.dir/test1.cpp.o  -o testMolCatalog ../../../lib/libRDKitMolCatalog.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 75%] Built target testMolCatalog
make -f Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolHash /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/DependInfo.cmake --color=
Scanning dependencies of target MolHash
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 75%] Building CXX object Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/MolHash.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/c++  -DMolHash_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLHASH_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolHash.dir/MolHash.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolHash/MolHash.cpp
[ 75%] Building CXX object Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/MaximumCommonSubgraph.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/c++  -DFMCS_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FMCS.dir/MaximumCommonSubgraph.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/MaximumCommonSubgraph.cpp
[ 75%] Linking CXX shared module ../../../../rdkit/Chem/rdMolCatalog.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolCatalog.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdMolCatalog.so CMakeFiles/rdMolCatalog.dir/rdMolCatalog.cpp.o ../../../../lib/libRDKitMolCatalog.so.1.2018.09.1 ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 75%] Built target rdMolCatalog
make -f Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MMPA /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/DependInfo.cmake --color=
Scanning dependencies of target MMPA
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 75%] Building CXX object Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/MMPA.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA && /usr/bin/c++  -DMMPA_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MMPA_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MMPA.dir/MMPA.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MMPA/MMPA.cpp
[ 76%] Building CXX object Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/SubstructMatchCustom.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/c++  -DFMCS_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/FMCS.dir/SubstructMatchCustom.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/SubstructMatchCustom.cpp
[ 76%] Building CXX object Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/HashToString.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/c++  -DMolHash_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLHASH_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolHash.dir/HashToString.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolHash/HashToString.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MMPA/MMPA.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 76%] Linking CXX shared library ../../../lib/libRDKitMolHash.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolHash.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitMolHash.so.1 -o ../../../lib/libRDKitMolHash.so.1.2018.09.1 CMakeFiles/MolHash.dir/MolHash.cpp.o CMakeFiles/MolHash.dir/HashToString.cpp.o ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make -f Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/build.make Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/DependInfo.cmake --color=
Scanning dependencies of target StructChecker
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/build.make Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 76%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/StructChecker.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/StructChecker.dir/StructChecker.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/StructChecker.cpp
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolHash.so.1.2018.09.1 ../../../lib/libRDKitMolHash.so.1 ../../../lib/libRDKitMolHash.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 76%] Built target MolHash
make -f Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/DependInfo.cmake --color=
Scanning dependencies of target trajectoryTest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 76%] Building CXX object Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/trajectoryTest.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_TRAJECTORY_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/trajectoryTest.dir/trajectoryTest.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory/trajectoryTest.cpp
[ 76%] Linking CXX shared library ../../../lib/libRDKitMMPA.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA && /usr/bin/cmake -E cmake_link_script CMakeFiles/MMPA.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitMMPA.so.1 -o ../../../lib/libRDKitMMPA.so.1.2018.09.1 CMakeFiles/MMPA.dir/MMPA.cpp.o ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMMPA.so.1.2018.09.1 ../../../lib/libRDKitMMPA.so.1 ../../../lib/libRDKitMMPA.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 76%] Built target MMPA
make -f Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SubstructLibrary /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/DependInfo.cmake --color=
Scanning dependencies of target substructLibraryTest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 76%] Building CXX object Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/substructLibraryTest.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_SUBSTRUCTLIBRARY_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/substructLibraryTest.dir/substructLibraryTest.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SubstructLibrary/substructLibraryTest.cpp
[ 76%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/StructCheckerOptions.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/StructChecker.dir/StructCheckerOptions.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/StructCheckerOptions.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory/Trajectory.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory/trajectoryTest.cpp:13:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
[ 76%] Linking CXX shared library ../../../lib/libRDKitFMCS.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/cmake -E cmake_link_script CMakeFiles/FMCS.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitFMCS.so.1 -o ../../../lib/libRDKitFMCS.so.1.2018.09.1 CMakeFiles/FMCS.dir/FMCS.cpp.o CMakeFiles/FMCS.dir/Seed.cpp.o CMakeFiles/FMCS.dir/MaximumCommonSubgraph.cpp.o CMakeFiles/FMCS.dir/SubstructMatchCustom.cpp.o ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitFMCS.so.1.2018.09.1 ../../../lib/libRDKitFMCS.so.1 ../../../lib/libRDKitFMCS.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 76%] Built target FMCS
make -f Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SubstructLibrary/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/DependInfo.cmake --color=
Scanning dependencies of target rdSubstructLibrary
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 76%] Building CXX object Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/rdSubstructLibrary.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSubstructLibrary_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdSubstructLibrary.dir/rdSubstructLibrary.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SubstructLibrary/Wrap/rdSubstructLibrary.cpp
/usr/include/c++/8/bits/vector.tcc: In function 'void testAddConformersFromTrajectory()':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 77%] Linking CXX executable trajectoryTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory && /usr/bin/cmake -E cmake_link_script CMakeFiles/trajectoryTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/trajectoryTest.dir/trajectoryTest.cpp.o  -o trajectoryTest ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../../lib/libRDKitForceField.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 77%] Built target trajectoryTest
make -f Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RGroupDecomposition /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/DependInfo.cmake --color=
Scanning dependencies of target RGroupDecomposition
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 77%] Building CXX object Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/RGroupDecomp.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_RGROUPDECOMPOSITION_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DRGroupDecomposition_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/RGroupDecomposition.dir/RGroupDecomp.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RGroupDecomposition/RGroupDecomp.cpp
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/StructCheckerOptions.cpp: In function 'bool RDKit::StructureCheck::ReadAAPairs(const string&, std::vector<std::pair<RDKit::StructureCheck::AugmentedAtom, RDKit::StructureCheck::AugmentedAtom> >&)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/StructCheckerOptions.cpp:354:9: warning: ignoring return value of 'int fscanf(FILE*, const char*, ...)', declared with attribute warn_unused_result [-Wunused-result]
   fscanf(fp, "%d", &n);
   ~~~~~~^~~~~~~~~~~~~~
[ 77%] Linking CXX executable substructLibraryTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary && /usr/bin/cmake -E cmake_link_script CMakeFiles/substructLibraryTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/substructLibraryTest.dir/substructLibraryTest.cpp.o  -o substructLibraryTest ../../../lib/libRDKitSubstructLibrary.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 77%] Built target substructLibraryTest
[ 78%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/StructureFlags.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/StructChecker.dir/StructureFlags.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/StructureFlags.cpp
[ 78%] Building CXX object Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/SubstructLibraryWrap.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdSubstructLibrary_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdSubstructLibrary.dir/SubstructLibraryWrap.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SubstructLibrary/Wrap/SubstructLibraryWrap.cpp
[ 78%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/Utilites.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/StructChecker.dir/Utilites.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/Utilites.cpp
[ 78%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/Pattern.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/StructChecker.dir/Pattern.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/Pattern.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RGroupDecomposition/../RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RGroupDecomposition/RGroupDecomp.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RGroupDecomposition/RGroupDecomp.cpp:31:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
make -f Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/DependInfo.cmake --color=
Scanning dependencies of target rdmolfiles
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 78%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/rdmolfiles.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdmolfiles.dir/rdmolfiles.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/rdmolfiles.cpp
[ 78%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/Stereo.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/StructChecker.dir/Stereo.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/Stereo.cpp
[ 78%] Linking CXX shared library ../../../lib/libRDKitRGroupDecomposition.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/cmake -E cmake_link_script CMakeFiles/RGroupDecomposition.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitRGroupDecomposition.so.1 -o ../../../lib/libRDKitRGroupDecomposition.so.1.2018.09.1 CMakeFiles/RGroupDecomposition.dir/RGroupDecomp.cpp.o ../../../lib/libRDKitFMCS.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitRGroupDecomposition.so.1.2018.09.1 ../../../lib/libRDKitRGroupDecomposition.so.1 ../../../lib/libRDKitRGroupDecomposition.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 78%] Built target RGroupDecomposition
make -f Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build.make Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/UFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/DependInfo.cmake --color=
Scanning dependencies of target testUFFForceField
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build.make Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 79%] Building CXX object Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/testUFFForceField.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/UFF && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testUFFForceField.dir/testUFFForceField.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/testUFFForceField.cpp
[ 79%] Linking CXX shared module ../../../../rdkit/Chem/rdSubstructLibrary.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdSubstructLibrary.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdSubstructLibrary.so CMakeFiles/rdSubstructLibrary.dir/rdSubstructLibrary.cpp.o CMakeFiles/rdSubstructLibrary.dir/SubstructLibraryWrap.cpp.o ../../../../lib/libRDKitSubstructLibrary.so.1.2018.09.1 ../../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 79%] Built target rdSubstructLibrary
make -f Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/DependInfo.cmake --color=
Scanning dependencies of target DistGeomHelpers
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
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make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 79%] Building CXX object Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/BoundsMatrixBuilder.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/c++  -DDistGeomHelpers_EXPORTS -DRDKIT_DISTGEOMHELPERS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/DistGeomHelpers.dir/BoundsMatrixBuilder.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.cpp
[ 79%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/AtomSymbolMatch.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/StructChecker.dir/AtomSymbolMatch.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/AtomSymbolMatch.cpp
[ 79%] Linking CXX executable testUFFForceField
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/UFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testUFFForceField.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testUFFForceField.dir/testUFFForceField.cpp.o  -o testUFFForceField ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitForceField.so.1.2018.09.1 ../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 79%] Built target testUFFForceField
make -f Code/DistGeom/CMakeFiles/testDistGeom.dir/build.make Code/DistGeom/CMakeFiles/testDistGeom.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom/CMakeFiles/testDistGeom.dir/DependInfo.cmake --color=
Scanning dependencies of target testDistGeom
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/DistGeom/CMakeFiles/testDistGeom.dir/build.make Code/DistGeom/CMakeFiles/testDistGeom.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 79%] Building CXX object Code/DistGeom/CMakeFiles/testDistGeom.dir/testDistGeom.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/c++  -DRDKIT_DISTGEOMETRY_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testDistGeom.dir/testDistGeom.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/testDistGeom.cpp
[ 79%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/StripSmallFragments.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/StructChecker.dir/StripSmallFragments.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/StripSmallFragments.cpp
[ 80%] Building CXX object Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/Embedder.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/c++  -DDistGeomHelpers_EXPORTS -DRDKIT_DISTGEOMHELPERS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/DistGeomHelpers.dir/Embedder.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/Embedder.cpp
[ 80%] Linking CXX executable testDistGeom
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDistGeom.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testDistGeom.dir/testDistGeom.cpp.o  -o testDistGeom ../../lib/libRDKitDistGeometry.so.1.2018.09.1 ../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../lib/libRDKitForceField.so.1.2018.09.1 ../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 80%] Built target testDistGeom
make -f Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build.make Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/DependInfo.cmake --color=
Scanning dependencies of target DistGeom
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build.make Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 80%] Building CXX object Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/DistGeom.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap && /usr/bin/c++  -DDistGeom_EXPORTS -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/DistGeom.dir/DistGeom.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/Wrap/DistGeom.cpp
[ 80%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/ForwardSDMolSupplier.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdmolfiles.dir/ForwardSDMolSupplier.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/ForwardSDMolSupplier.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/../MolOps.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/StripSmallFragments.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 81%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/ReCharge.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/StructChecker.dir/ReCharge.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/ReCharge.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:16,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/Embedder.h:16,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/Embedder.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:16,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/Embedder.h:16,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/Embedder.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In function 'void RDKit::DGeomHelpers::detail::embedHelper_(int, int, RDKit::DGeomHelpers::detail::EmbedArgs*)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:60,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/Wrap/DistGeom.cpp:12:
/usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<std::pair<int, int>&&>, std::tuple<>}; _Key = std::pair<int, int>; _Val = std::pair<const std::pair<int, int>, double>; _KeyOfValue = std::_Select1st<std::pair<const std::pair<int, int>, double> >; _Compare = std::less<std::pair<int, int> >; _Alloc = std::allocator<std::pair<const std::pair<int, int>, double> >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<std::pair<int, int>, std::pair<const std::pair<int, int>, double>, std::_Select1st<std::pair<const std::pair<int, int>, double> >, std::less<std::pair<int, int> >, std::allocator<std::pair<const std::pair<int, int>, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const std::pair<int, int>, double> >'} changed in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:61,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/Wrap/DistGeom.cpp:12:
/usr/include/c++/8/bits/stl_map.h: In function 'PyObject* RDKit::embedBoundsMatrix(boost::python::api::object, int, bool, int, boost::python::list, int)':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<std::pair<int, int>, std::pair<const std::pair<int, int>, double>, std::_Select1st<std::pair<const std::pair<int, int>, double> >, std::less<std::pair<int, int> >, std::allocator<std::pair<const std::pair<int, int>, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const std::pair<int, int>, double> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 81%] Linking CXX shared module ../../../rdkit/DistanceGeometry/DistGeom.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/DistGeom.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../rdkit/DistanceGeometry/DistGeom.so CMakeFiles/DistGeom.dir/DistGeom.cpp.o ../../../lib/libRDKitDistGeometry.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../lib/libRDKitForceField.so.1.2018.09.1 ../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 81%] Built target DistGeom
make -f Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/DependInfo.cmake --color=
[ 81%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/Tautomer.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DStructChecker_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/StructChecker.dir/Tautomer.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/Tautomer.cpp
Scanning dependencies of target ChemReactions
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 81%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/Reaction.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ChemReactions.dir/Reaction.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Reaction.cpp
[ 81%] Linking CXX shared library ../../../lib/libRDKitDistGeomHelpers.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/DistGeomHelpers.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitDistGeomHelpers.so.1 -o ../../../lib/libRDKitDistGeomHelpers.so.1.2018.09.1 CMakeFiles/DistGeomHelpers.dir/BoundsMatrixBuilder.cpp.o CMakeFiles/DistGeomHelpers.dir/Embedder.cpp.o ../../../lib/libRDKitDistGeometry.so.1.2018.09.1 ../../../lib/libRDKitAlignment.so.1.2018.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitForceField.so.1.2018.09.1 ../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitDistGeomHelpers.so.1.2018.09.1 ../../../lib/libRDKitDistGeomHelpers.so.1 ../../../lib/libRDKitDistGeomHelpers.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 81%] Built target DistGeomHelpers
[ 81%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SDMolSupplier.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdmolfiles.dir/SDMolSupplier.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/SDMolSupplier.cpp
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/ForwardSDMolSupplier.cpp:23:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:185:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       off_type py_pos = bp::extract<off_type>(py_tell());
                                                        ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:155:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
         off_type py_pos = bp::extract<off_type>(py_tell());
                                                          ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:336:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       result = off_type(bp::extract<off_type>(py_tell()));
                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekpos(boost_adaptbx::python::streambuf::pos_type, std::ios_base::openmode)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:336:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       result = off_type(bp::extract<off_type>(py_tell()));
                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make -f Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/DependInfo.cmake --color=
Scanning dependencies of target testDescriptors
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 81%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/test.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testDescriptors.dir/test.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/test.cpp
[ 81%] Linking CXX shared library ../../../lib/libRDKitStructChecker.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/cmake -E cmake_link_script CMakeFiles/StructChecker.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitStructChecker.so.1 -o ../../../lib/libRDKitStructChecker.so.1.2018.09.1 CMakeFiles/StructChecker.dir/StructChecker.cpp.o CMakeFiles/StructChecker.dir/StructCheckerOptions.cpp.o CMakeFiles/StructChecker.dir/StructureFlags.cpp.o CMakeFiles/StructChecker.dir/Utilites.cpp.o CMakeFiles/StructChecker.dir/Pattern.cpp.o CMakeFiles/StructChecker.dir/Stereo.cpp.o CMakeFiles/StructChecker.dir/AtomSymbolMatch.cpp.o CMakeFiles/StructChecker.dir/StripSmallFragments.cpp.o CMakeFiles/StructChecker.dir/ReCharge.cpp.o CMakeFiles/StructChecker.dir/Tautomer.cpp.o ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitStructChecker.so.1.2018.09.1 ../../../lib/libRDKitStructChecker.so.1 ../../../lib/libRDKitStructChecker.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 81%] Built target StructChecker
[ 82%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/TDTMolSupplier.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdmolfiles.dir/TDTMolSupplier.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/TDTMolSupplier.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Reaction.h:37,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Reaction.cpp:33:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 82%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/MDLParser.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ChemReactions.dir/MDLParser.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/MDLParser.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/SDMolSupplier.cpp:13:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::fpos<__mbstate_t>}; _Tp = std::fpos<__mbstate_t>; _Alloc = std::allocator<std::fpos<__mbstate_t> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::fpos<__mbstate_t> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'void RDKit::setStreamIndices(RDKit::SDMolSupplier&, boost::python::api::object)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::fpos<__mbstate_t>*, std::vector<std::fpos<__mbstate_t> > >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
make -f Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/DependInfo.cmake --color=
Scanning dependencies of target testAUTOCORR2D
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 82%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/testAUTOCORR2D.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/c++  -DRDKIT_DESCRIPTORS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testAUTOCORR2D.dir/testAUTOCORR2D.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/testAUTOCORR2D.cpp
[ 82%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SmilesMolSupplier.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdmolfiles.dir/SmilesMolSupplier.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/SmilesMolSupplier.cpp
[ 82%] Linking CXX executable testAUTOCORR2D
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/testAUTOCORR2D.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testAUTOCORR2D.dir/testAUTOCORR2D.cpp.o  -o testAUTOCORR2D ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 82%] Built target testAUTOCORR2D
[ 82%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SmilesWriter.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdmolfiles.dir/SmilesWriter.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/SmilesWriter.cpp
[ 82%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/DaylightParser.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ChemReactions.dir/DaylightParser.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/DaylightParser.cpp
[ 82%] Linking CXX executable testDescriptors
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDescriptors.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testDescriptors.dir/test.cpp.o  -o testDescriptors ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 82%] Built target testDescriptors
make -f Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build.make Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMolDescriptors
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build.make Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 82%] Building CXX object Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/rdMolDescriptors.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolDescriptors_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMolDescriptors.dir/rdMolDescriptors.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Wrap/rdMolDescriptors.cpp
[ 82%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionPickler.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ChemReactions.dir/ReactionPickler.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionPickler.cpp
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/SmilesWriter.cpp:20:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekpos(boost_adaptbx::python::streambuf::pos_type, std::ios_base::openmode)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:336:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       result = off_type(bp::extract<off_type>(py_tell()));
                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 82%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SDWriter.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdmolfiles.dir/SDWriter.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/SDWriter.cpp
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:185:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       off_type py_pos = bp::extract<off_type>(py_tell());
                                                        ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:155:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
         off_type py_pos = bp::extract<off_type>(py_tell());
                                                          ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:336:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       result = off_type(bp::extract<off_type>(py_tell()));
                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 82%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/TDTWriter.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdmolfiles.dir/TDTWriter.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/TDTWriter.cpp
[ 82%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionWriter.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ChemReactions.dir/ReactionWriter.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionWriter.cpp
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/SDWriter.cpp:21:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:185:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       off_type py_pos = bp::extract<off_type>(py_tell());
                                                        ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:155:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
         off_type py_pos = bp::extract<off_type>(py_tell());
                                                          ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekpos(boost_adaptbx::python::streambuf::pos_type, std::ios_base::openmode)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:336:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       result = off_type(bp::extract<off_type>(py_tell()));
                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:336:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       result = off_type(bp::extract<off_type>(py_tell()));
                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/TDTWriter.cpp:21:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:185:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       off_type py_pos = bp::extract<off_type>(py_tell());
                                                        ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:155:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
         off_type py_pos = bp::extract<off_type>(py_tell());
                                                          ^
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Reaction.h:37,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionWriter.cpp:33:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekpos(boost_adaptbx::python::streambuf::pos_type, std::ios_base::openmode)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:336:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       result = off_type(bp::extract<off_type>(py_tell()));
                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'void {anonymous}::setRXNRoleOfAllMoleculeAtoms(RDKit::ROMol&, int)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:336:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       result = off_type(bp::extract<off_type>(py_tell()));
                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 83%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionDepict.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ChemReactions.dir/ReactionDepict.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionDepict.cpp
[ 83%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionFingerprints.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ChemReactions.dir/ReactionFingerprints.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionFingerprints.cpp
[ 83%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/PDBWriter.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolfiles_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdmolfiles.dir/PDBWriter.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/PDBWriter.cpp
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Conformer.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:36,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/GraphMol.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Wrap/rdMolDescriptors.cpp:12:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h: In function 'boost::python::list {anonymous}::GetUSRDistributionsFromPoints(boost::python::api::object, boost::python::api::object)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:85:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
     x = other.x;
         ~~~~~~^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:86:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::y' may be used uninitialized in this function [-Wmaybe-uninitialized]
     y = other.y;
         ~~~~~~^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:87:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::z' may be used uninitialized in this function [-Wmaybe-uninitialized]
     z = other.z;
         ~~~~~~^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h: In function 'boost::python::list {anonymous}::GetUSRDistributions(boost::python::api::object, boost::python::api::object)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:85:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
     x = other.x;
         ~~~~~~^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:86:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::y' may be used uninitialized in this function [-Wmaybe-uninitialized]
     y = other.y;
         ~~~~~~^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:87:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::z' may be used uninitialized in this function [-Wmaybe-uninitialized]
     z = other.z;
         ~~~~~~^
[ 83%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionUtils.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ChemReactions.dir/ReactionUtils.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionUtils.cpp
[ 83%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/MoleculeParser.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ChemReactions.dir/MoleculeParser.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/MoleculeParser.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Reaction.h:37,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionUtils.cpp:34:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/PDBWriter.cpp:20:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:185:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       off_type py_pos = bp::extract<off_type>(py_tell());
                                                        ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:155:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
         off_type py_pos = bp::extract<off_type>(py_tell());
                                                          ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekpos(boost_adaptbx::python::streambuf::pos_type, std::ios_base::openmode)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:336:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       result = off_type(bp::extract<off_type>(py_tell()));
                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:336:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       result = off_type(bp::extract<off_type>(py_tell()));
                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 83%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionRunner.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ChemReactions.dir/ReactionRunner.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionRunner.cpp
make -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/MMFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/DependInfo.cmake --color=
Scanning dependencies of target testMMFFForceFieldHelpers
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 84%] Building CXX object Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/testMMFFHelpers.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testMMFFForceFieldHelpers.dir/testMMFFHelpers.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/MMFF/testMMFFHelpers.cpp
[ 85%] Linking CXX shared module ../../../rdkit/Chem/rdmolfiles.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdmolfiles.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../rdkit/Chem/rdmolfiles.so CMakeFiles/rdmolfiles.dir/rdmolfiles.cpp.o CMakeFiles/rdmolfiles.dir/ForwardSDMolSupplier.cpp.o CMakeFiles/rdmolfiles.dir/SDMolSupplier.cpp.o CMakeFiles/rdmolfiles.dir/TDTMolSupplier.cpp.o CMakeFiles/rdmolfiles.dir/SmilesMolSupplier.cpp.o CMakeFiles/rdmolfiles.dir/SmilesWriter.cpp.o CMakeFiles/rdmolfiles.dir/SDWriter.cpp.o CMakeFiles/rdmolfiles.dir/TDTWriter.cpp.o CMakeFiles/rdmolfiles.dir/PDBWriter.cpp.o ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 85%] Built target rdmolfiles
[ 85%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/PreprocessRxn.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ChemReactions.dir/PreprocessRxn.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/PreprocessRxn.cpp
make -f Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/UFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/DependInfo.cmake --color=
Scanning dependencies of target testUFFForceFieldHelpers
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 85%] Building CXX object Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/testUFFHelpers.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testUFFForceFieldHelpers.dir/testUFFHelpers.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/UFF/testUFFHelpers.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Reaction.h:37,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionRunner.cpp:33:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
[ 85%] Linking CXX shared module ../../../../rdkit/Chem/rdMolDescriptors.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolDescriptors.dir/link.txt --verbose=1
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Reaction.h:37,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionRunner.cpp:33:
/usr/include/c++/8/bits/stl_vector.h: In function 'void RDKit::ReactionRunnerUtils::generateProductConformers(RDKit::Conformer*, const RDKit::ROMol&, RDKit::ReactionRunnerUtils::ReactantProductAtomMapping*)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdMolDescriptors.so CMakeFiles/rdMolDescriptors.dir/rdMolDescriptors.cpp.o ../../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 85%] Built target rdMolDescriptors
[ 86%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/SanitizeRxn.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ChemReactions.dir/SanitizeRxn.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/SanitizeRxn.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Reaction.h:37,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionRunner.cpp:33:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/MMFF/testMMFFHelpers.cpp:15:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/MMFF/testMMFFHelpers.cpp:15:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 86%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/Enumerate/Enumerate.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ChemReactions.dir/Enumerate/Enumerate.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/Enumerate.cpp
[ 86%] Linking CXX executable testMMFFForceFieldHelpers
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMMFFForceFieldHelpers.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testMMFFForceFieldHelpers.dir/testMMFFHelpers.cpp.o  -o testMMFFForceFieldHelpers ../../../../lib/libRDKitDistGeomHelpers.so.1.2018.09.1 ../../../../lib/libRDKitDistGeometry.so.1.2018.09.1 ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitMolAlign.so.1.2018.09.1 ../../../../lib/libRDKitAlignment.so.1.2018.09.1 ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitForceField.so.1.2018.09.1 ../../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 86%] Built target testMMFFForceFieldHelpers
[ 86%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/Enumerate/EnumerationPickler.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ChemReactions.dir/Enumerate/EnumerationPickler.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/EnumerationPickler.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Reaction.h:37,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/SanitizeRxn.h:36,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/SanitizeRxn.cpp:32:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/UFF/testUFFHelpers.cpp:15:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/UFF/testUFFHelpers.cpp:15:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
[ 86%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/Enumerate/EvenSamplePairs.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DChemReactions_EXPORTS -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/ChemReactions.dir/Enumerate/EvenSamplePairs.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/EvenSamplePairs.cpp
make -f Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build.make Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/CrystalFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/DependInfo.cmake --color=
Scanning dependencies of target testCrystalForceField
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build.make Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 86%] Building CXX object Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/testCrystalFF.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELDHELPERS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testCrystalForceField.dir/testCrystalFF.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/CrystalFF/testCrystalFF.cpp
[ 86%] Linking CXX executable testUFFForceFieldHelpers
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testUFFForceFieldHelpers.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testUFFForceFieldHelpers.dir/testUFFHelpers.cpp.o  -o testUFFForceFieldHelpers ../../../../lib/libRDKitDistGeomHelpers.so.1.2018.09.1 ../../../../lib/libRDKitDistGeometry.so.1.2018.09.1 ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitMolAlign.so.1.2018.09.1 ../../../../lib/libRDKitAlignment.so.1.2018.09.1 ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitForceField.so.1.2018.09.1 ../../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 86%] Built target testUFFForceFieldHelpers
make -f Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/DependInfo.cmake --color=
Scanning dependencies of target testDistGeomHelpers
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 86%] Building CXX object Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/testDgeomHelpers.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/c++  -DRDKIT_DISTGEOMHELPERS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testDistGeomHelpers.dir/testDgeomHelpers.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp
make -f Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build.make Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/DependInfo.cmake --color=
Scanning dependencies of target rdDistGeom
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build.make Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 86%] Building CXX object Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/rdDistGeom.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap && /usr/bin/c++  -DBOOST_PYTHON_MAX_ARITY=32 -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdDistGeom_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdDistGeom.dir/rdDistGeom.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp
[ 86%] Linking CXX executable testCrystalForceField
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testCrystalForceField.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testCrystalForceField.dir/testCrystalFF.cpp.o  -o testCrystalForceField ../../../../lib/libRDKitDistGeomHelpers.so.1.2018.09.1 ../../../../lib/libRDKitDistGeometry.so.1.2018.09.1 ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitMolAlign.so.1.2018.09.1 ../../../../lib/libRDKitAlignment.so.1.2018.09.1 ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitForceField.so.1.2018.09.1 ../../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 86%] Built target testCrystalForceField
make -f Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/DependInfo.cmake --color=
Scanning dependencies of target testMolAlign
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 86%] Building CXX object Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/testMolAlign.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLALIGN_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testMolAlign.dir/testMolAlign.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/testMolAlign.cpp
[ 86%] Linking CXX shared library ../../../lib/libRDKitChemReactions.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_link_script CMakeFiles/ChemReactions.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitChemReactions.so.1 -o ../../../lib/libRDKitChemReactions.so.1.2018.09.1 CMakeFiles/ChemReactions.dir/Reaction.cpp.o CMakeFiles/ChemReactions.dir/MDLParser.cpp.o CMakeFiles/ChemReactions.dir/DaylightParser.cpp.o CMakeFiles/ChemReactions.dir/ReactionPickler.cpp.o CMakeFiles/ChemReactions.dir/ReactionWriter.cpp.o CMakeFiles/ChemReactions.dir/ReactionDepict.cpp.o CMakeFiles/ChemReactions.dir/ReactionFingerprints.cpp.o CMakeFiles/ChemReactions.dir/ReactionUtils.cpp.o CMakeFiles/ChemReactions.dir/MoleculeParser.cpp.o CMakeFiles/ChemReactions.dir/ReactionRunner.cpp.o CMakeFiles/ChemReactions.dir/PreprocessRxn.cpp.o CMakeFiles/ChemReactions.dir/SanitizeRxn.cpp.o CMakeFiles/ChemReactions.dir/Enumerate/Enumerate.cpp.o CMakeFiles/ChemReactions.dir/Enumerate/EnumerationPickler.cpp.o CMakeFiles/ChemReactions.dir/Enumerate/EvenSamplePairs.cpp.o ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../lib/libRDKitChemReactions.so.1 ../../../lib/libRDKitChemReactions.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 86%] Built target ChemReactions
make -f Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/DependInfo.cmake --color=
Scanning dependencies of target testFMCS
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 86%] Building CXX object Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/testFMCS_Unit.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testFMCS.dir/testFMCS_Unit.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/testFMCS_Unit.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:13:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/testFMCS_Unit.cpp:48:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Vector.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Matrix.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/SquareMatrix.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Transform3D.h:16,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/AlignMolecules.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/testMolAlign.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {std::pair<double, double>}; _Tp = std::pair<double, double>; _Alloc = std::allocator<std::pair<double, double> >]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<std::pair<double, double> >::iterator' {aka '__gnu_cxx::__normal_iterator<std::pair<double, double>*, std::vector<std::pair<double, double> > >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {std::pair<double, double>}; _Tp = std::pair<double, double>; _Alloc = std::allocator<std::pair<double, double> >]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<std::pair<double, double>*, std::vector<std::pair<double, double> > >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'void test504()':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'void test18()':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 86%] Linking CXX executable testFMCS
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS && /usr/bin/cmake -E cmake_link_script CMakeFiles/testFMCS.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testFMCS.dir/testFMCS_Unit.cpp.o  -o testFMCS ../../../lib/libRDKitFMCS.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 86%] Built target testFMCS
make -f Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build.make Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/DependInfo.cmake --color=
Scanning dependencies of target rdFMCS
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build.make Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 86%] Building CXX object Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/rdFMCS.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdFMCS_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdFMCS.dir/rdFMCS.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Wrap/rdFMCS.cpp
In file included from /usr/include/c++/8/set:60,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/SetQuery.h:13,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:29,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:13:
/usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDGeom::Point3D>; _KeyOfValue = std::_Select1st<std::pair<const int, RDGeom::Point3D> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:61,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:26,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:13:
/usr/include/c++/8/bits/stl_map.h: In member function 'std::map<_Key, _Tp, _Compare, _Alloc>::mapped_type& std::map<_Key, _Tp, _Compare, _Alloc>::operator[](std::map<_Key, _Tp, _Compare, _Alloc>::key_type&&) [with _Key = int; _Tp = RDGeom::Point3D; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h: In function 'void testConstrainedEmbedding()':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:13:
/usr/include/c++/8/bits/vector.tcc: In function 'void testGithub568()':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:13:
/usr/include/c++/8/bits/stl_vector.h: In function 'void testTemp()':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
[ 86%] Linking CXX executable testMolAlign
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolAlign.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testMolAlign.dir/testMolAlign.cpp.o  -o testMolAlign ../../../lib/libRDKitMolAlign.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitDistGeomHelpers.so.1.2018.09.1 ../../../lib/libRDKitDistGeometry.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitForceField.so.1.2018.09.1 ../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitAlignment.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 86%] Built target testMolAlign
make -f Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/build.make Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Test /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/DependInfo.cmake --color=
Scanning dependencies of target FMCStest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/build.make Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
In file included from /usr/include/c++/8/map:60,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp:10:
/usr/include/c++/8/bits/stl_tree.h: In function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, RDGeom::Point3D>; _KeyOfValue = std::_Select1st<std::pair<const int, RDGeom::Point3D> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, RDGeom::Point3D> >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
[ 86%] Building CXX object Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/testFMCS.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FMCS_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/FMCStest.dir/testFMCS.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Test/testFMCS.cpp
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Conformer.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:36,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/GraphMol.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp:17:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h: In function 'RDKit::INT_VECT RDKit::EmbedMultipleConfs(RDKit::ROMol&, unsigned int, unsigned int, int, bool, bool, double, bool, unsigned int, double, boost::python::dict&, double, bool, bool, int, bool, bool, bool)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:85:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
     x = other.x;
         ~~~~~~^
In file included from /usr/include/c++/8/map:61,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp:10:
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Conformer.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h:36,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/GraphMol.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp:17:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h: In function 'int RDKit::EmbedMolecule(RDKit::ROMol&, unsigned int, int, bool, bool, double, bool, unsigned int, boost::python::dict&, double, bool, bool, bool, bool, bool)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:85:15: warning: '*((void*)(&<anonymous>)+16).RDGeom::Point3D::x' may be used uninitialized in this function [-Wmaybe-uninitialized]
     x = other.x;
         ~~~~~~^
In file included from /usr/include/c++/8/map:61,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp:10:
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, RDGeom::Point3D>, std::_Select1st<std::pair<const int, RDGeom::Point3D> >, std::less<int>, std::allocator<std::pair<const int, RDGeom::Point3D> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, RDGeom::Point3D> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[ 86%] Linking CXX executable testDistGeomHelpers
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers && /usr/bin/cmake -E cmake_link_script CMakeFiles/testDistGeomHelpers.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testDistGeomHelpers.dir/testDgeomHelpers.cpp.o  -o testDistGeomHelpers ../../../lib/libRDKitDistGeomHelpers.so.1.2018.09.1 ../../../lib/libRDKitDistGeometry.so.1.2018.09.1 ../../../lib/libRDKitMolAlign.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitAlignment.so.1.2018.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../../lib/libRDKitForceField.so.1.2018.09.1 ../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 86%] Built target testDistGeomHelpers
make -f Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolHash /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/DependInfo.cmake --color=
Scanning dependencies of target testMolHash
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 86%] Building CXX object Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/testMolHash.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLHASH_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testMolHash.dir/testMolHash.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolHash/testMolHash.cpp
[ 86%] Linking CXX shared module ../../../../rdkit/Chem/rdDistGeom.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdDistGeom.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdDistGeom.so CMakeFiles/rdDistGeom.dir/rdDistGeom.cpp.o ../../../../lib/libRDKitDistGeomHelpers.so.1.2018.09.1 ../../../../lib/libRDKitDistGeometry.so.1.2018.09.1 ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitMolAlign.so.1.2018.09.1 ../../../../lib/libRDKitAlignment.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitForceField.so.1.2018.09.1 ../../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 86%] Built target rdDistGeom
make -f Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build.make Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolHash/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMolHash
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build.make Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 87%] Building CXX object Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/rdMolHash.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolHash_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMolHash.dir/rdMolHash.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolHash/Wrap/rdMolHash.cpp
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Test/testFMCS.cpp: In function 'std::__cxx11::string testChEMBL_Txt(const char*, double, const char*)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Test/testFMCS.cpp:501:17: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type' {aka 'unsigned int'} [-Wformat=]
   fprintf(fres, "%s;%lu;%.1f;%.4f;%u;%u;%s;", test, mols.size(), th, sec,
                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~        ~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Test/testFMCS.cpp: In function 'void testFileSDF_RandomSet_SMI(const char*, const char*)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Test/testFMCS.cpp:1172:21: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type' {aka 'unsigned int'} [-Wformat=]
       fprintf(fcsv, "%u;%lu;%s;%.3f;%u;%u;%s;", n, mols.size(),
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~     ~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Test/testFMCS.cpp:1184:21: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type' {aka 'unsigned int'} [-Wformat=]
       fprintf(fcsv, "%u;%lu;%s;%.3f;%u;%u;%s\n", n, mols.size(),
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~~     ~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Test/testFMCS.cpp: In function 'void testFileSDF_RandomSet(const char*, const char*)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Test/testFMCS.cpp:1279:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type' {aka 'unsigned int'} [-Wformat=]
         fprintf(fcsv, "%u;%lu;%s;%.5f;%u;%u;%s;", n, mols.size(),
                       ^~~~~~~~~~~~~~~~~~~~~~~~~~     ~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Test/testFMCS.cpp:1328:21: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type' {aka 'unsigned int'} [-Wformat=]
       fprintf(fcsv, "%u;%lu;%s;%.5f;%u;%u;%s;", n, mols.size(),
                     ^~~~~~~~~~~~~~~~~~~~~~~~~~     ~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Test/testFMCS.cpp:1408:23: warning: format '%lu' expects argument of type 'long unsigned int', but argument 4 has type 'std::vector<boost::shared_ptr<RDKit::ROMol> >::size_type' {aka 'unsigned int'} [-Wformat=]
         fprintf(fcsv, "%u;%lu;%s;%.5f;%u;%u;%s;", n, mols.size(),
                       ^~~~~~~~~~~~~~~~~~~~~~~~~~     ~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Test/../../RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Test/testFMCS.cpp:48:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'void test504()':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 87%] Linking CXX executable testMolHash
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMolHash.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testMolHash.dir/testMolHash.cpp.o  -o testMolHash ../../../lib/libRDKitMolHash.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 87%] Built target testMolHash
make -f Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MMPA /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/DependInfo.cmake --color=
Scanning dependencies of target testMMPA
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 87%] Building CXX object Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/MMPA_UnitTest.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MMPA_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testMMPA.dir/MMPA_UnitTest.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MMPA/MMPA_UnitTest.cpp
[ 87%] Linking CXX executable FMCStest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test && /usr/bin/cmake -E cmake_link_script CMakeFiles/FMCStest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/FMCStest.dir/testFMCS.cpp.o  -o FMCStest ../../../../lib/libRDKitFMCS.so.1.2018.09.1 ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 87%] Built target FMCStest
make -f Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build.make Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MMPA/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMMPA
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
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make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 87%] Building CXX object Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/rdMMPA.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMMPA_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMMPA.dir/rdMMPA.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MMPA/Wrap/rdMMPA.cpp
[ 87%] Linking CXX shared module ../../../../rdkit/Chem/rdFMCS.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdFMCS.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdFMCS.so CMakeFiles/rdFMCS.dir/rdFMCS.cpp.o ../../../../lib/libRDKitFMCS.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 87%] Built target rdFMCS
make -f Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/build.make Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/DependInfo.cmake --color=
Scanning dependencies of target testStructChecker
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/build.make Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 88%] Building CXX object Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/testStructChecker.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_STRUCTCHECKER_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testStructChecker.dir/testStructChecker.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/testStructChecker.cpp
[ 88%] Linking CXX shared module ../../../../rdkit/Chem/rdMolHash.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolHash.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdMolHash.so CMakeFiles/rdMolHash.dir/rdMolHash.cpp.o ../../../../lib/libRDKitMolHash.so.1.2018.09.1 ../../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 88%] Built target rdMolHash
make -f Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/build.make Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/DependInfo.cmake --color=
Scanning dependencies of target rdStructChecker
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make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 88%] Building CXX object Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/structchecker.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdStructChecker_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdStructChecker.dir/structchecker.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/Wrap/structchecker.cpp
[ 88%] Linking CXX executable testMMPA
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMMPA.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testMMPA.dir/MMPA_UnitTest.cpp.o  -o testMMPA ../../../lib/libRDKitMMPA.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 88%] Built target testMMPA
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[ 88%] Building CXX object Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/testRGroupDecomp.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_RGROUPDECOMPOSITION_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testRGroupDecomp.dir/testRGroupDecomp.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RGroupDecomposition/testRGroupDecomp.cpp
[ 88%] Linking CXX executable testStructChecker
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker && /usr/bin/cmake -E cmake_link_script CMakeFiles/testStructChecker.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testStructChecker.dir/testStructChecker.cpp.o  -o testStructChecker ../../../lib/libRDKitStructChecker.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
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cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdRGroupDecomposition_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdRGroupDecomposition.dir/rdRGroupComposition.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RGroupDecomposition/Wrap/rdRGroupComposition.cpp
[ 88%] Linking CXX shared module ../../../../rdkit/Chem/rdMMPA.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMMPA.dir/link.txt --verbose=1
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cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/DependInfo.cmake --color=
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cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/MolStandardize.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/MolStandardize.cpp
[ 89%] Linking CXX shared module ../../../../rdkit/Chem/rdStructChecker.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdStructChecker.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdStructChecker.so CMakeFiles/rdStructChecker.dir/structchecker.cpp.o ../../../../lib/libRDKitStructChecker.so.1.2018.09.1 ../../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
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[ 89%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Metal.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/Metal.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Metal.cpp
[ 89%] Linking CXX executable testRGroupDecomp
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition && /usr/bin/cmake -E cmake_link_script CMakeFiles/testRGroupDecomp.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testRGroupDecomp.dir/testRGroupDecomp.cpp.o  -o testRGroupDecomp ../../../lib/libRDKitRGroupDecomposition.so.1.2018.09.1 ../../../lib/libRDKitFMCS.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 89%] Built target testRGroupDecomp
make -f Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/build.make Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/MMFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/DependInfo.cmake --color=
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make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 89%] Building CXX object Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/testMMFFForceField.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/MMFF && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_FORCEFIELD_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testMMFFForceField.dir/testMMFFForceField.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/testMMFFForceField.cpp
make -f Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/depend
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cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/DependInfo.cmake --color=
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make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 89%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/testReaction.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testReaction.dir/testReaction.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/testReaction.cpp
[ 89%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Normalize.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/Normalize.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Normalize.cpp
[ 89%] Linking CXX shared module ../../../../rdkit/Chem/rdRGroupDecomposition.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdRGroupDecomposition.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdRGroupDecomposition.so CMakeFiles/rdRGroupDecomposition.dir/rdRGroupComposition.cpp.o ../../../../lib/libRDKitRGroupDecomposition.so.1.2018.09.1 ../../../../lib/libRDKitFMCS.so.1.2018.09.1 ../../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 89%] Built target rdRGroupDecomposition
[ 89%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Validate.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/Validate.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Validate.cpp
[ 89%] Linking CXX executable testMMFFForceField
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/MMFF && /usr/bin/cmake -E cmake_link_script CMakeFiles/testMMFFForceField.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testMMFFForceField.dir/testMMFFForceField.cpp.o  -o testMMFFForceField ../../../lib/libRDKitDistGeomHelpers.so.1.2018.09.1 ../../../lib/libRDKitDistGeometry.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitMolAlign.so.1.2018.09.1 ../../../lib/libRDKitAlignment.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitForceFieldHelpers.so.1.2018.09.1 ../../../lib/libRDKitForceField.so.1.2018.09.1 ../../../lib/libRDKitOptimizer.so.1.2018.09.1 ../../../lib/libRDKitTrajectory.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 89%] Built target testMMFFForceField
[ 89%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Charge.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/Charge.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Charge.cpp
make -f Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/DependInfo.cmake --color=
Scanning dependencies of target rxnTestCatch
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 90%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/catch_tests.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/rxnTestCatch.dir/catch_tests.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/catch_tests.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/testReaction.cpp:34:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/testReaction.cpp:34:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void RDKit::Conformer::setAtomPos(unsigned int, const RDGeom::Point3D&)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/testReaction.cpp:34:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 90%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Tautomer.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/Tautomer.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Tautomer.cpp
[ 91%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/Fragment.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/Fragment.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Fragment.cpp
[ 91%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogEntry.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogEntry.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogEntry.cpp
[ 91%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogParams.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogParams.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogParams.cpp
make -f Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/DependInfo.cmake --color=
Scanning dependencies of target testReactionFingerprints
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 92%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/testReactionFingerprints.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/c++  -DRDKIT_CHEMREACTIONS_BUILD -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/testReactionFingerprints.dir/testReactionFingerprints.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/testReactionFingerprints.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include/catch.hpp:465,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/catch_tests.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const Catch::SectionEndInfo&}; _Tp = Catch::SectionEndInfo; _Alloc = std::allocator<Catch::SectionEndInfo>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<Catch::SectionEndInfo>::iterator' {aka '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >'} changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include/catch.hpp:465,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/catch_tests.cpp:12:
/usr/include/c++/8/bits/stl_vector.h: In member function 'virtual void Catch::RunContext::sectionEndedEarly(const Catch::SectionEndInfo&)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<Catch::SectionEndInfo*, std::vector<Catch::SectionEndInfo> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
[ 92%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogUtils.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogUtils.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.cpp
[ 92%] Linking CXX executable testReactionFingerprints
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_link_script CMakeFiles/testReactionFingerprints.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testReactionFingerprints.dir/testReactionFingerprints.cpp.o  -o testReactionFingerprints ../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 92%] Built target testReactionFingerprints
[ 92%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogEntry.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogEntry.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogEntry.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'std::vector<std::shared_ptr<RDKit::ROMol> > RDKit::MolStandardize::readFuncGroups(std::istream&, int)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
make -f Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build.make Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/DependInfo.cmake --color=
Scanning dependencies of target rdChemReactions
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build.make Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 92%] Building CXX object Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/Enumerate.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdChemReactions_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdChemReactions.dir/Enumerate.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp
[ 92%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogParams.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogParams.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogParams.cpp
[ 93%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogUtils.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogUtils.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.cpp
[ 93%] Linking CXX executable rxnTestCatch
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_link_script CMakeFiles/rxnTestCatch.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/rxnTestCatch.dir/catch_tests.cpp.o  -o rxnTestCatch ../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 93%] Built target rxnTestCatch
[ 93%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogEntry.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogEntry.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogEntry.cpp
/usr/include/c++/8/bits/vector.tcc: In function 'std::vector<std::pair<boost::shared_ptr<RDKit::ROMol>, boost::shared_ptr<RDKit::ROMol> > > RDKit::MolStandardize::readPairs(std::istream&, int)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
make -f Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DependInfo.cmake --color=
Scanning dependencies of target MolDraw2D
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 93%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2D.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++  -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolDraw2D.dir/MolDraw2D.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2D.cpp
[ 93%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogParams.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogParams.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogParams.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const long long unsigned int&}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/8/bits/stl_vector.h: In static member function 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_append(Container&, boost::python::api::object) [with Container = std::vector<long long unsigned int>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>]':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h: In function 'void boost::python::container_utils::extend_container(Container&, boost::python::api::object) [with Container = std::vector<long long unsigned int>]':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/8/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::iterator) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/8/bits/vector.tcc:172:5: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:172:5: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/8/bits/stl_vector.h: In static member function 'static void boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_delete_item(Container&, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>; bool NoProxy = false; bool NoSlice = false; Data = long long unsigned int; Index = unsigned int; Key = long long unsigned int]':
/usr/include/c++/8/bits/stl_vector.h:1348:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
                                                                       ^
[ 93%] Linking CXX executable testReaction
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions && /usr/bin/cmake -E cmake_link_script CMakeFiles/testReaction.dir/link.txt --verbose=1
In file included from /usr/include/c++/8/algorithm:62,
                 from /usr/include/boost/function/detail/prologue.hpp:13,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/8/bits/stl_algo.h: In function '_RandomAccessIterator std::__find_if(_RandomAccessIterator, _RandomAccessIterator, _Predicate, std::random_access_iterator_tag) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Predicate = __gnu_cxx::__ops::_Iter_equals_val<const long long unsigned int>]':
/usr/include/c++/8/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
     __find_if(_RandomAccessIterator __first, _RandomAccessIterator __last,
     ^~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:112:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/testReaction.dir/testReaction.cpp.o  -o testReaction ../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
/usr/include/c++/8/bits/stl_algo.h: In static member function 'static bool boost::python::indexing_suite<Container, DerivedPolicies, NoProxy, NoSlice, Data, Index, Key>::base_contains(Container&, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>; bool NoProxy = false; bool NoSlice = false; Data = long long unsigned int; Index = unsigned int; Key = long long unsigned int]':
/usr/include/c++/8/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
       return __find_if(__first, __last, __pred,
              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
          std::__iterator_category(__first));
          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_algo.h:161:23: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
       return __find_if(__first, __last, __pred,
              ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
          std::__iterator_category(__first));
          ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 93%] Built target testReaction
[ 93%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogUtils.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogUtils.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_range_insert(std::vector<_Tp, _Alloc>::iterator, _ForwardIterator, _ForwardIterator, std::forward_iterator_tag) [with _ForwardIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc:672:7: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/8/bits/stl_vector.h: In static member function 'static void boost::python::vector_indexing_suite<Container, NoProxy, DerivedPolicies>::base_extend(Container&, boost::python::api::object) [with Container = std::vector<long long unsigned int>; bool NoProxy = false; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>]':
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
    _M_range_insert(__pos, __first, __last,
    ^~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_vector.h: In static member function 'static void boost::python::detail::slice_helper<Container, DerivedPolicies, ProxyHandler, Data, Index>::base_set_slice(Container&, PySliceObject*, PyObject*) [with Container = std::vector<long long unsigned int>; DerivedPolicies = boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>; ProxyHandler = boost::python::detail::no_proxy_helper<std::vector<long long unsigned int>, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false>, boost::python::detail::container_element<std::vector<long long unsigned int>, unsigned int, boost::python::detail::final_vector_derived_policies<std::vector<long long unsigned int>, false> >, unsigned int>; Data = long long unsigned int; Index = unsigned int]':
/usr/include/c++/8/bits/stl_vector.h:1348:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
                                                                       ^
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/8/bits/vector.tcc:149:2: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  _M_realloc_insert(begin() + (__position - cbegin()), __x);
  ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/8/bits/stl_vector.h:1348:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
                                                                       ^
In file included from /usr/include/c++/8/vector:69,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/8/bits/vector.tcc:149:2: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  _M_realloc_insert(begin() + (__position - cbegin()), __x);
  ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /usr/include/boost/detail/container_fwd.hpp:93,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:31:
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
    _M_range_insert(__pos, __first, __last,
    ^~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/8/bits/stl_vector.h:1348:71: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
  return _M_erase(__beg + (__first - __cbeg), __beg + (__last - __cbeg));
                                                                       ^
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
    _M_range_insert(__pos, __first, __last,
    ^~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1549:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
In file included from /usr/include/boost/python/suite/indexing/indexing_suite.hpp:12,
                 from /usr/include/boost/python/suite/indexing/vector_indexing_suite.hpp:9,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap.h:24,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Wrap/Enumerate.cpp:32:
/usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:689:9: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
         }
         ^
/usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:689:9: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
/usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:689:9: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
/usr/include/boost/python/suite/indexing/detail/indexing_suite_detail.hpp:689:9: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' {aka '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >'} changed in GCC 7.1
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/QueryOps.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:14:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_fill_insert(std::vector<_Tp, _Alloc>::iterator, std::vector<_Tp, _Alloc>::size_type, const value_type&) [with _Tp = RDGeom::Point3D; _Alloc = std::allocator<RDGeom::Point3D>]':
/usr/include/c++/8/bits/vector.tcc:478:5: note: parameter passing for argument of type 'std::vector<RDGeom::Point3D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/QueryOps.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:14:
/usr/include/c++/8/bits/stl_vector.h: In constructor 'RDKit::Conformer::Conformer(unsigned int)':
/usr/include/c++/8/bits/stl_vector.h:847:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point3D*, std::vector<RDGeom::Point3D> >' changed in GCC 7.1
    _M_fill_insert(end(), __new_size - size(), __x);
    ^~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/QueryOps.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:14:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<double>::iterator' {aka '__gnu_cxx::__normal_iterator<double*, std::vector<double> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDGeom::Point2D&}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point2D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 93%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2DSVG.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++  -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolDraw2D.dir/MolDraw2DSVG.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2DSVG.cpp
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/QueryOps.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2D.cpp:14:
/usr/include/c++/8/bits/stl_vector.h: In member function 'void RDKit::MolDraw2D::extractAtomCoords(const RDKit::ROMol&, int, bool)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'std::vector<std::shared_ptr<RDKit::ChemicalReaction> > RDKit::MolStandardize::readTransformations(std::istream&, int)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 94%] Building CXX object Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/rdChemReactions.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_BOOST_SERIALIZATION -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdChemReactions_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdChemReactions.dir/rdChemReactions.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp
/usr/include/c++/8/bits/stl_vector.h: In member function 'virtual void RDKit::MolDraw2D::drawReaction(const RDKit::ChemicalReaction&, bool, const std::vector<boost::tuples::tuple<float, float, float> >*, const std::vector<int>*)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
[ 94%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogEntry.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogEntry.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogEntry.cpp
[ 95%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2DDetails.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++  -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolDraw2D.dir/MolDraw2DDetails.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2DDetails.cpp
[ 95%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogParams.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogParams.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogParams.cpp
[ 96%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogUtils.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DMolStandardize_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogUtils.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2DDetails.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2DDetails.cpp:11:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {const RDGeom::Point2D&}; _Tp = RDGeom::Point2D; _Alloc = std::allocator<RDGeom::Point2D>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDGeom::Point2D>::iterator' {aka '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2DDetails.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2DDetails.cpp:11:
/usr/include/c++/8/bits/stl_vector.h: In function 'void RDKit::MolDraw2D_detail::arcPoints(const RDGeom::Point2D&, const RDGeom::Point2D&, std::vector<RDGeom::Point2D>&, float, float)':
/usr/include/c++/8/bits/stl_vector.h:1085:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDGeom::Point2D*, std::vector<RDGeom::Point2D> >' changed in GCC 7.1
    _M_realloc_insert(end(), __x);
    ^~~~~~~~~~~~~~~~~
[ 96%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/MolDraw2DUtils.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++  -DMolDraw2D_EXPORTS -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/MolDraw2D.dir/MolDraw2DUtils.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2DUtils.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h:18,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h:20,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h:25,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h:23,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.cpp:10:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'RDKit::MolStandardize::TautomerTransform* RDKit::{anonymous}::getTautomer(const string&)':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 96%] Linking CXX shared library ../../../lib/libRDKitMolStandardize.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolStandardize.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitMolStandardize.so.1 -o ../../../lib/libRDKitMolStandardize.so.1.2018.09.1 CMakeFiles/MolStandardize.dir/MolStandardize.cpp.o CMakeFiles/MolStandardize.dir/Metal.cpp.o CMakeFiles/MolStandardize.dir/Normalize.cpp.o CMakeFiles/MolStandardize.dir/Validate.cpp.o CMakeFiles/MolStandardize.dir/Charge.cpp.o CMakeFiles/MolStandardize.dir/Tautomer.cpp.o CMakeFiles/MolStandardize.dir/Fragment.cpp.o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogEntry.cpp.o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogParams.cpp.o CMakeFiles/MolStandardize.dir/FragmentCatalog/FragmentCatalogUtils.cpp.o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogEntry.cpp.o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogParams.cpp.o CMakeFiles/MolStandardize.dir/AcidBaseCatalog/AcidBaseCatalogUtils.cpp.o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogEntry.cpp.o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogParams.cpp.o CMakeFiles/MolStandardize.dir/TransformCatalog/TransformCatalogUtils.cpp.o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogEntry.cpp.o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogParams.cpp.o CMakeFiles/MolStandardize.dir/TautomerCatalog/TautomerCatalogUtils.cpp.o ../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lboost_serialization 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolStandardize.so.1.2018.09.1 ../../../lib/libRDKitMolStandardize.so.1 ../../../lib/libRDKitMolStandardize.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 96%] Built target MolStandardize
make -f Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/depend
make -f Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/DependInfo.cmake --color=
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/DependInfo.cmake --color=
Scanning dependencies of target molValidateTest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/build
Scanning dependencies of target molNormalizeTest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 96%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/testValidate.cpp.o
[ 96%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/testNormalize.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/molValidateTest.dir/testValidate.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/testValidate.cpp
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/molNormalizeTest.dir/testNormalize.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/testNormalize.cpp
[ 96%] Linking CXX shared library ../../../lib/libRDKitMolDraw2D.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolDraw2D.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared -Wl,-soname,libRDKitMolDraw2D.so.1 -o ../../../lib/libRDKitMolDraw2D.so.1.2018.09.1 CMakeFiles/MolDraw2D.dir/MolDraw2D.cpp.o CMakeFiles/MolDraw2D.dir/MolDraw2DSVG.cpp.o CMakeFiles/MolDraw2D.dir/MolDraw2DDetails.cpp.o CMakeFiles/MolDraw2D.dir/MolDraw2DUtils.cpp.o ../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lboost_serialization 
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/cmake -E cmake_symlink_library ../../../lib/libRDKitMolDraw2D.so.1.2018.09.1 ../../../lib/libRDKitMolDraw2D.so.1 ../../../lib/libRDKitMolDraw2D.so
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 96%] Built target MolDraw2D
make -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/DependInfo.cmake --color=
Scanning dependencies of target molStandardizeTest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 96%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/test1.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/molStandardizeTest.dir/test1.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/test1.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:16,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolPickler.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp:32:
/usr/include/c++/8/bits/vector.tcc: In member function 'std::vector<_Tp, _Alloc>::iterator std::vector<_Tp, _Alloc>::_M_erase(std::vector<_Tp, _Alloc>::iterator) [with _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:159:5: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
     vector<_Tp, _Alloc>::
     ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc:159:5: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 97%] Linking CXX executable molNormalizeTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molNormalizeTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/molNormalizeTest.dir/testNormalize.cpp.o  -o molNormalizeTest ../../../lib/libRDKitMolStandardize.so.1.2018.09.1 ../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
In file included from /usr/include/c++/8/vector:64,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h:16,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolPickler.h:14,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp:32:
/usr/include/c++/8/bits/stl_vector.h: In function 'void RDKit::MolClearComputedProps(const RDOb&) [with RDOb = RDKit::ChemicalReaction]':
/usr/include/c++/8/bits/stl_vector.h:1318:58: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
       { return _M_erase(begin() + (__position - cbegin())); }
                                                          ^
[ 97%] Built target molNormalizeTest
make -f Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/DependInfo.cmake --color=
Scanning dependencies of target molChargeTest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 97%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/testCharge.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/molChargeTest.dir/testCharge.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/testCharge.cpp
/usr/include/c++/8/bits/stl_vector.h: In function 'void RDKit::MolClearProp(const RDOb&, const char*) [with RDOb = RDKit::ChemicalReaction]':
/usr/include/c++/8/bits/stl_vector.h:1318:58: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
       { return _M_erase(begin() + (__position - cbegin())); }
                                                          ^
[ 97%] Linking CXX executable molValidateTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molValidateTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/molValidateTest.dir/testValidate.cpp.o  -o molValidateTest ../../../lib/libRDKitMolStandardize.so.1.2018.09.1 ../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 97%] Built target molValidateTest
make -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/DependInfo.cmake --color=
Scanning dependencies of target molStandardizeSmallTest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 97%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/test2.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/molStandardizeSmallTest.dir/test2.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/test2.cpp
[ 97%] Linking CXX executable molStandardizeTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molStandardizeTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/molStandardizeTest.dir/test1.cpp.o  -o molStandardizeTest ../../../lib/libRDKitMolStandardize.so.1.2018.09.1 ../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 97%] Built target molStandardizeTest
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make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/DependInfo.cmake --color=
Scanning dependencies of target molTautomerTest
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make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 97%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/testTautomer.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/molTautomerTest.dir/testTautomer.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/testTautomer.cpp
[ 97%] Linking CXX executable molChargeTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molChargeTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/molChargeTest.dir/testCharge.cpp.o  -o molChargeTest ../../../lib/libRDKitMolStandardize.so.1.2018.09.1 ../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 97%] Built target molChargeTest
make -f Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/DependInfo.cmake --color=
Scanning dependencies of target molFragmentTest
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 97%] Building CXX object Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/testFragment.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLSTANDARDIZE_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/molFragmentTest.dir/testFragment.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/testFragment.cpp
[ 97%] Linking CXX executable molStandardizeSmallTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molStandardizeSmallTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/molStandardizeSmallTest.dir/test2.cpp.o  -o molStandardizeSmallTest ../../../lib/libRDKitMolStandardize.so.1.2018.09.1 ../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 97%] Built target molStandardizeSmallTest
make -f Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/build.make Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMolStandardize
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make -f Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/build.make Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 97%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/rdMolStandardize.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMolStandardize.dir/rdMolStandardize.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Wrap/rdMolStandardize.cpp
[ 97%] Linking CXX shared module ../../../../rdkit/Chem/rdChemReactions.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdChemReactions.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/rdChemReactions.so CMakeFiles/rdChemReactions.dir/Enumerate.cpp.o CMakeFiles/rdChemReactions.dir/rdChemReactions.cpp.o ../../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 97%] Built target rdChemReactions
[ 97%] Linking CXX executable molFragmentTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molFragmentTest.dir/link.txt --verbose=1
[ 97%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Validate.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMolStandardize.dir/Validate.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Wrap/Validate.cpp
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/molFragmentTest.dir/testFragment.cpp.o  -o molFragmentTest ../../../lib/libRDKitMolStandardize.so.1.2018.09.1 ../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lboost_serialization 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 97%] Built target molFragmentTest
[ 97%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Charge.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMolStandardize.dir/Charge.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Wrap/Charge.cpp
[ 97%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Fragment.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMolStandardize.dir/Fragment.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Wrap/Fragment.cpp
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/DependInfo.cmake --color=
Scanning dependencies of target moldraw2DTest1
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 97%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/test1.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/moldraw2DTest1.dir/test1.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/test1.cpp
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/DependInfo.cmake --color=
Scanning dependencies of target moldraw2DRxnTest1
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 97%] Building CXX object Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/rxn_test1.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDKIT_MOLDRAW2D_BUILD -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC   -o CMakeFiles/moldraw2DRxnTest1.dir/rxn_test1.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/rxn_test1.cpp
[ 98%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Normalize.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMolStandardize.dir/Normalize.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Wrap/Normalize.cpp
[ 99%] Linking CXX executable molTautomerTest
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize && /usr/bin/cmake -E cmake_link_script CMakeFiles/molTautomerTest.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/molTautomerTest.dir/testTautomer.cpp.o  -o molTautomerTest ../../../lib/libRDKitMolStandardize.so.1.2018.09.1 ../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 99%] Built target molTautomerTest
make -f Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/DependInfo.cmake --color=
Scanning dependencies of target rdMolDraw2D
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 99%] Building CXX object Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/rdMolDraw2D.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolDraw2D_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMolDraw2D.dir/rdMolDraw2D.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp
In file included from /usr/include/c++/8/vector:69,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:21,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/test1.cpp:12:
/usr/include/c++/8/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(std::vector<_Tp, _Alloc>::iterator, _Args&& ...) [with _Args = {RDKit::Dict::Pair}; _Tp = RDKit::Dict::Pair; _Alloc = std::allocator<RDKit::Dict::Pair>]':
/usr/include/c++/8/bits/vector.tcc:413:7: note: parameter passing for argument of type 'std::vector<RDKit::Dict::Pair>::iterator' {aka '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >'} changed in GCC 7.1
       vector<_Tp, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~
/usr/include/c++/8/bits/vector.tcc: In function 'void testGithub1322()':
/usr/include/c++/8/bits/vector.tcc:109:4: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RDKit::Dict::Pair*, std::vector<RDKit::Dict::Pair> >' changed in GCC 7.1
    _M_realloc_insert(end(), std::forward<_Args>(__args)...);
    ^~~~~~~~~~~~~~~~~
[ 99%] Linking CXX executable moldraw2DRxnTest1
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/cmake -E cmake_link_script CMakeFiles/moldraw2DRxnTest1.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/moldraw2DRxnTest1.dir/rxn_test1.cpp.o  -o moldraw2DRxnTest1 ../../../lib/libRDKitMolDraw2D.so.1.2018.09.1 ../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 99%] Built target moldraw2DRxnTest1
[ 99%] Building CXX object Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/Metal.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -DrdMolStandardize_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdMolStandardize.dir/Metal.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Wrap/Metal.cpp
In file included from /usr/include/c++/8/map:60,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/test1.cpp:12:
/usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<int&&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, double> >'} changed in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/8/map:61,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h:19,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h:28,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h:15,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/test1.cpp:12:
/usr/include/c++/8/bits/stl_map.h: In function 'void test3()':
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, double> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
/usr/include/c++/8/bits/stl_map.h:518:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, double> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
make -f Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/depend
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/DependInfo.cmake --color=
Scanning dependencies of target rdmolops
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build
make[4]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 99%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/rdmolops.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolops_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdmolops.dir/rdmolops.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/rdmolops.cpp
[100%] Linking CXX executable moldraw2DTest1
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D && /usr/bin/cmake -E cmake_link_script CMakeFiles/moldraw2DTest1.dir/link.txt --verbose=1
/usr/bin/c++  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC  -Wl,-z,relro -rdynamic CMakeFiles/moldraw2DTest1.dir/test1.cpp.o  -o moldraw2DTest1 ../../../lib/libRDKitMolDraw2D.so.1.2018.09.1 ../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 -lboost_serialization ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[100%] Built target moldraw2DTest1
[100%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/MolOps.cpp.o
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/c++  -DRDKIT_DYN_LINK -DRDK_32BIT_BUILD -DRDK_TEST_MULTITHREADED -DRDK_THREADSAFE_SSS -DRDK_USE_STRICT_ROTOR_DEFINITION -Drdmolops_EXPORTS -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/catch/catch/single_include -I/usr/include/python2.7 -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/External/boost-numeric-bindings  -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -fPIC   -o CMakeFiles/rdmolops.dir/MolOps.cpp.o -c /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/MolOps.cpp
[100%] Linking CXX shared module ../../../../rdkit/Chem/MolStandardize/rdMolStandardize.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolStandardize.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/MolStandardize/rdMolStandardize.so CMakeFiles/rdMolStandardize.dir/rdMolStandardize.cpp.o CMakeFiles/rdMolStandardize.dir/Validate.cpp.o CMakeFiles/rdMolStandardize.dir/Charge.cpp.o CMakeFiles/rdMolStandardize.dir/Fragment.cpp.o CMakeFiles/rdMolStandardize.dir/Normalize.cpp.o CMakeFiles/rdMolStandardize.dir/Metal.cpp.o ../../../../lib/libRDKitMolStandardize.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lboost_serialization 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[100%] Built target rdMolStandardize
In file included from /usr/include/c++/8/map:60,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:11:
/usr/include/c++/8/bits/stl_tree.h: In member function 'std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::iterator std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::_M_emplace_hint_unique(std::_Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::const_iterator, _Args&& ...) [with _Args = {const std::piecewise_construct_t&, std::tuple<const int&>, std::tuple<>}; _Key = int; _Val = std::pair<const int, double>; _KeyOfValue = std::_Select1st<std::pair<const int, double> >; _Compare = std::less<int>; _Alloc = std::allocator<std::pair<const int, double> >]':
/usr/include/c++/8/bits/stl_tree.h:2411:7: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, double> >'} changed in GCC 7.1
       _Rb_tree<_Key, _Val, _KeyOfValue, _Compare, _Alloc>::
       ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp: In function 'void RDKit::{anonymous}::pyDictToDoubleMap(boost::python::api::object, std::map<int, double>&)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:54:57: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
     double r = python::extract<double>(tDict.values()[i]);
                                                         ^
In file included from /usr/include/c++/8/map:61,
                 from /usr/include/boost/detail/container_fwd.hpp:94,
                 from /usr/include/boost/container_hash/extensions.hpp:22,
                 from /usr/include/boost/container_hash/hash.hpp:760,
                 from /usr/include/boost/type_index/stl_type_index.hpp:43,
                 from /usr/include/boost/type_index.hpp:29,
                 from /usr/include/boost/function/function_base.hpp:21,
                 from /usr/include/boost/function/detail/prologue.hpp:17,
                 from /usr/include/boost/function/function_template.hpp:13,
                 from /usr/include/boost/function/detail/maybe_include.hpp:15,
                 from /usr/include/boost/function/function0.hpp:11,
                 from /usr/include/boost/python/errors.hpp:13,
                 from /usr/include/boost/python/handle.hpp:11,
                 from /usr/include/boost/python/args_fwd.hpp:10,
                 from /usr/include/boost/python/args.hpp:10,
                 from /usr/include/boost/python.hpp:11,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h:3,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/Wrap/rdMolDraw2D.cpp:11:
/usr/include/c++/8/bits/stl_map.h:499:8: note: parameter passing for argument of type 'std::_Rb_tree<int, std::pair<const int, double>, std::_Select1st<std::pair<const int, double> >, std::less<int>, std::allocator<std::pair<const int, double> > >::const_iterator' {aka 'std::_Rb_tree_const_iterator<std::pair<const int, double> >'} changed in GCC 7.1
    __i = _M_t._M_emplace_hint_unique(__i, std::piecewise_construct,
[100%] Linking CXX shared module ../../../../rdkit/Chem/Draw/rdMolDraw2D.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdMolDraw2D.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../../rdkit/Chem/Draw/rdMolDraw2D.so CMakeFiles/rdMolDraw2D.dir/rdMolDraw2D.cpp.o ../../../../lib/libRDKitMolDraw2D.so.1.2018.09.1 ../../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lboost_serialization 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[100%] Built target rdMolDraw2D
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap/MolOps.cpp:30:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In member function 'virtual boost_adaptbx::python::streambuf::pos_type boost_adaptbx::python::streambuf::seekoff(boost_adaptbx::python::streambuf::off_type, std::ios_base::seekdir, std::ios_base::openmode)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:336:16: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       result = off_type(bp::extract<off_type>(py_tell()));
                ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h: In constructor 'boost_adaptbx::python::streambuf::streambuf(boost::python::api::object&, std::size_t)':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:185:56: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
       off_type py_pos = bp::extract<off_type>(py_tell());
                                                        ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h:155:58: warning: '*((void*)&<anonymous> +16)' may be used uninitialized in this function [-Wmaybe-uninitialized]
         off_type py_pos = bp::extract<off_type>(py_tell());
                                                          ^
[100%] Linking CXX shared module ../../../rdkit/Chem/rdmolops.so
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap && /usr/bin/cmake -E cmake_link_script CMakeFiles/rdmolops.dir/link.txt --verbose=1
/usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wdate-time -D_FORTIFY_SOURCE=2 -std=c++11 -Wno-deprecated -Wno-unused-function -fno-strict-aliasing -Wall -Wextra -fPIC -Wl,-z,relro -shared  -o ../../../rdkit/Chem/rdmolops.so CMakeFiles/rdmolops.dir/rdmolops.cpp.o CMakeFiles/rdmolops.dir/MolOps.cpp.o ../../../lib/libRDKitMolDraw2D.so.1.2018.09.1 ../../../lib/libRDKitRDBoost.so.1.2018.09.1 -lpython2.7 -lboost_python27 -lboost_serialization ../../../lib/libRDKitChemReactions.so.1.2018.09.1 ../../../lib/libRDKitFingerprints.so.1.2018.09.1 ../../../lib/libRDKitChemTransforms.so.1.2018.09.1 ../../../lib/libRDKitFilterCatalog.so.1.2018.09.1 ../../../lib/libRDKitCatalogs.so.1.2018.09.1 ../../../lib/libRDKitDescriptors.so.1.2018.09.1 ../../../lib/libRDKitPartialCharges.so.1.2018.09.1 ../../../lib/libRDKitFileParsers.so.1.2018.09.1 ../../../lib/libRDKitDepictor.so.1.2018.09.1 ../../../lib/libRDKitSubstructMatch.so.1.2018.09.1 ../../../lib/libRDKitSubgraphs.so.1.2018.09.1 ../../../lib/libRDKitSmilesParse.so.1.2018.09.1 ../../../lib/libRDKitMolTransforms.so.1.2018.09.1 ../../../lib/libRDKitGraphMol.so.1.2018.09.1 ../../../lib/libRDKitEigenSolvers.so.1.2018.09.1 ../../../lib/libRDKitRDGeometryLib.so.1.2018.09.1 ../../../lib/libRDKitDataStructs.so.1.2018.09.1 ../../../lib/libRDKitRDGeneral.so.1.2018.09.1 -lpthread -lboost_serialization 
make[4]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[100%] Built target rdmolops
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_start /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 0
make[2]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
STATIC_LINK=0 RDKIT_LIBDIR=/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf//lib pg_buildext build /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit build-%v
supported-versions: WARNING! Unknown distribution: raspbian
debian found in ID_LIKE, treating as Debian
### build 11 ###
make[2]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/build-11'
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o rdkit_io.o /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_io.c
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o mol_op.o /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c: In function 'mol_murckoscaffold':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:253:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
   CROMol scaffold = MolMurckoScaffold(mol);
   ^~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c: In function 'mol_hash':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:273:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
   char *res = pnstrdup(str, len);
   ^~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c: In function 'mol_adjust_query_properties':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:286:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
   char *data = PG_GETARG_CSTRING(1);
   ^~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:290:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
   Mol *res = deconstructROMol(adj);
   ^~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c: In function 'mol_to_svg':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:305:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
   char *legend = PG_GETARG_CSTRING(1);
   ^~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c: In function 'fmcs_smiles':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:329:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
   char *res = pnstrdup(str, strlen(str));
   ^~~~
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:34:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c: In function 'fmcs_mol2s_transition':
/usr/include/postgresql/11/server/fmgr.h:238:29: warning: initialization of 'CROMol' {aka 'void *'} from 'Datum' {aka 'unsigned int'} makes pointer from integer without a cast [-Wint-conversion]
 #define PG_GETARG_DATUM(n)  (fcinfo->arg[n])
                             ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:381:18: note: in expansion of macro 'PG_GETARG_DATUM'
     CROMol mol = PG_GETARG_DATUM(1);
                  ^~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:397:5: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
     text *ts = (text *)palloc(ts_size);  // new return value
     ^~~~
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:34:
/usr/include/postgresql/11/server/fmgr.h:238:29: warning: initialization of 'CROMol' {aka 'void *'} from 'Datum' {aka 'unsigned int'} makes pointer from integer without a cast [-Wint-conversion]
 #define PG_GETARG_DATUM(n)  (fcinfo->arg[n])
                             ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:409:18: note: in expansion of macro 'PG_GETARG_DATUM'
     CROMol mol = PG_GETARG_DATUM(1);
                  ^~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:417:5: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
     char *smiles = makeMolText(mol, &len, false);
     ^~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c: In function 'fmcs_mols':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:455:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
   int32 ts_size = VARHDRSZ + strlen(str);
   ^~~~~
In file included from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:34:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c: In function 'fmcs_mol_transition':
/usr/include/postgresql/11/server/fmgr.h:238:29: warning: initialization of 'CROMol' {aka 'void *'} from 'Datum' {aka 'unsigned int'} makes pointer from integer without a cast [-Wint-conversion]
 #define PG_GETARG_DATUM(n)  (fcinfo->arg[n])
                             ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:477:18: note: in expansion of macro 'PG_GETARG_DATUM'
     CROMol mol = PG_GETARG_DATUM(1);
                  ^~~~~~~~~~~~~~~
/usr/include/postgresql/11/server/fmgr.h:238:29: warning: initialization of 'CROMol' {aka 'void *'} from 'Datum' {aka 'unsigned int'} makes pointer from integer without a cast [-Wint-conversion]
 #define PG_GETARG_DATUM(n)  (fcinfo->arg[n])
                             ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:488:18: note: in expansion of macro 'PG_GETARG_DATUM'
     CROMol mol = PG_GETARG_DATUM(1);
                  ^~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c: In function 'fmcs_smiles_transition':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:361:1: warning: control reaches end of non-void function [-Wreturn-type]
 }
 ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c: In function 'fmcs_mol_transition':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:496:1: warning: control reaches end of non-void function [-Wreturn-type]
 }
 ^
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o bfp_op.o /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/bfp_op.c
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o sfp_op.o /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/sfp_op.c
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o rxn_op.o /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rxn_op.c
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rxn_op.c:164:1: warning: multi-line comment [-Wcomment]
 //  /* keep compiler quiet - no extra ; */                                \
 ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rxn_op.c: In function 'reaction_to_svg':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rxn_op.c:179:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
   bool highlightByReactants = PG_GETARG_BOOL(1);
   ^~~~
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o rdkit_gist.o /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c: In function 'soergeldistsign':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:240:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
   uint8 *as = (uint8 *)VARDATA(a);
   ^~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c: In function 'soergeldist':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:275:16: warning: implicit declaration of function 'floor' [-Wimplicit-function-declaration]
   return (int) floor(10000*soergeldistsign(a, b));
                ^~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:275:16: warning: incompatible implicit declaration of built-in function 'floor'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:275:16: note: include '<math.h>' or provide a declaration of 'floor'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:42:1:
+#include <math.h>
 
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:275:16:
   return (int) floor(10000*soergeldistsign(a, b));
                ^~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:262:10: warning: unused variable 'd' [-Wunused-variable]
   double d;
          ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c: In function 'gmol_consistent':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:526:7: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
       uint8 *k = (uint8 *)VARDATA(key);
       ^~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:538:7: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
       uint8 *k = (uint8 *)VARDATA(key);
       ^~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:570:7: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
       uint8 *k = (uint8 *)VARDATA(key);
       ^~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c: In function 'rdkit_consistent':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:658:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
   int siglen = SIGLEN(query);
   ^~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:673:5: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
     uint8 *k = (uint8 *)VARDATA(key);
     ^~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c: In function 'gsfp_consistent':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:708:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
   int sum, overlapSum, overlapN;
   ^~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:714:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
   int nKey = (ISALLTRUE(key)) ?
   ^~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c: In function 'greaction_consistent':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:787:7: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
       uint8 *k = (uint8 *)VARDATA(key);
       ^~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:804:7: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
       uint8 *k = (uint8 *)VARDATA(key);
       ^~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:832:7: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
       uint8 *k = (uint8 *)VARDATA(key);
       ^~~~~
At top level:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:646:1: warning: 'rdkit_consistent' defined but not used [-Wunused-function]
 rdkit_consistent(GISTENTRY *entry, StrategyNumber strategy, bytea *key, bytea *query)
 ^~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c:261:1: warning: 'soergeldist' defined but not used [-Wunused-function]
 soergeldist(bytea *a, bytea *b) {
 ^~~~~~~~~~~
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o bfp_gist.o /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/bfp_gist.c
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/bfp_gist.c: In function 'merge_key':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/bfp_gist.c:699:3: warning: ISO C90 forbids mixed declarations and code [-Wdeclaration-after-statement]
   int siglen = GBFP_INNER_SIGLEN(result);
   ^~~
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o bfp_gin.o /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/bfp_gin.c
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o low_gist.o /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/low_gist.c
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/low_gist.c: In function 'gslfp_consistent':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/low_gist.c:410:30: warning: implicit declaration of function 'searchSfpCache' [-Wimplicit-function-declaration]
   fcinfo->flinfo->fn_extra = searchSfpCache(
                              ^~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/low_gist.c:410:28: warning: assignment to 'void *' from 'int' makes pointer from integer without a cast [-Wint-conversion]
   fcinfo->flinfo->fn_extra = searchSfpCache(
                            ^
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o guc.o /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/guc.c
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o cache.o /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/cache.c
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/cache.c: In function 'createCache':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/cache.c:312:17: warning: assignment discards 'const' qualifier from pointer target type [-Wdiscarded-qualifiers]
     methodsOrig = ctx->methods;
                 ^
In file included from /usr/include/postgresql/11/server/postgres.h:47,
                 from /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/cache.c:33:
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/cache.c:341:19: warning: format '%ld' expects argument of type 'long int', but argument 3 has type 'unsigned int' [-Wformat=]
       elog(ERROR, "Could not allocate %ld bytes", sizeof(*newholder));
                   ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  ~~~~~~~~~~~~~~~~~~
/usr/include/postgresql/11/server/utils/elog.h:202:23: note: in definition of macro 'elog'
   elog_finish(elevel, __VA_ARGS__); \
                       ^~~~~~~~~~~
g++ -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wno-unused-function -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"' -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o adapter.o /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/adapter.cpp
gcc -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -fPIC -c -o bitstring.o /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/bitstring.c
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/bitstring.c: In function 'bitstringUnion':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/bitstring.c:72:7: warning: unused variable 'i' [-Wunused-variable]
   int i;
       ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/bitstring.c: In function 'bitstringIntersection':
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/bitstring.c:106:7: warning: unused variable 'i' [-Wunused-variable]
   int i;
       ^
g++ -Wall -Wmissing-prototypes -Wpointer-arith -Wdeclaration-after-statement -Wendif-labels -Wmissing-format-attribute -Wformat-security -fno-strict-aliasing -fwrapv -fexcess-precision=standard -Wno-format-truncation -Wno-stringop-truncation -g -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -shared -o rdkit.so rdkit_io.o mol_op.o bfp_op.o sfp_op.o rxn_op.o rdkit_gist.o bfp_gist.o bfp_gin.o low_gist.o guc.o cache.o adapter.o bitstring.o -L/usr/lib/arm-linux-gnueabihf  -Wl,-z,relro -Wl,-z,now -L/usr/lib/llvm-7/lib  -L/usr/lib/arm-linux-gnueabihf/mit-krb5 -Wl,--as-needed -g -O2 -fdebug-prefix-map=/<<BUILDDIR>>/rdkit-201809.1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2  -L/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf//lib   -lRDKitMolDraw2D -lRDKitMolTransforms -lRDKitMolHash -lRDKitFMCS -lRDKitChemReactions -lRDKitChemTransforms -lRDKitFileParsers -lRDKitSmilesParse -lRDKitFingerprints -lRDKitSubgraphs -lRDKitDescriptors -lRDKitPartialCharges -lRDKitSubstructMatch  -lRDKitGraphMol -lRDKitEigenSolvers -lRDKitDataStructs -lRDKitDepictor -lRDKitRDGeometryLib -lRDKitRDGeneral -pthread  
sed -e's/@RDKIT_PG_BFP_GIST_FETCH@/FUNCTION    9   gbfp_fetch (internal),/;' \
-e's/@RDKIT_GIN_BFP_TRICONSISTENT@/FUNCTION    6   gin_bfp_triconsistent(internal, int2, bfp, int4, internal, internal, internal),/' \
 /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit.sql.in > rdkit--3.7.sql
/usr/bin/clang-7 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o rdkit_io.bc /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_io.c
/usr/bin/clang-7 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o mol_op.bc /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:361:1: warning: control may reach end of non-void function [-Wreturn-type]
}
^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:381:12: warning: incompatible integer to pointer conversion initializing 'CROMol' (aka 'void *') with an expression of type 'Datum' (aka 'unsigned int') [-Wint-conversion]
    CROMol mol = PG_GETARG_DATUM(1);
           ^     ~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:409:12: warning: incompatible integer to pointer conversion initializing 'CROMol' (aka 'void *') with an expression of type 'Datum' (aka 'unsigned int') [-Wint-conversion]
    CROMol mol = PG_GETARG_DATUM(1);
           ^     ~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:477:12: warning: incompatible integer to pointer conversion initializing 'CROMol' (aka 'void *') with an expression of type 'Datum' (aka 'unsigned int') [-Wint-conversion]
    CROMol mol = PG_GETARG_DATUM(1);
           ^     ~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:488:12: warning: incompatible integer to pointer conversion initializing 'CROMol' (aka 'void *') with an expression of type 'Datum' (aka 'unsigned int') [-Wint-conversion]
    CROMol mol = PG_GETARG_DATUM(1);
           ^     ~~~~~~~~~~~~~~~~~~
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/mol_op.c:496:1: warning: control may reach end of non-void function [-Wreturn-type]
}
^
6 warnings generated.
/usr/bin/clang-7 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o bfp_op.bc /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/bfp_op.c
/usr/bin/clang-7 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o sfp_op.bc /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/sfp_op.c
/usr/bin/clang-7 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o rxn_op.bc /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rxn_op.c
/usr/bin/clang-7 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o rdkit_gist.bc /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit_gist.c
/usr/bin/clang-7 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o bfp_gist.bc /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/bfp_gist.c
/usr/bin/clang-7 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o bfp_gin.bc /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/bfp_gin.c
/usr/bin/clang-7 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o low_gist.bc /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/low_gist.c
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/low_gist.c:410:30: warning: implicit declaration of function 'searchSfpCache' is invalid in C99 [-Wimplicit-function-declaration]
  fcinfo->flinfo->fn_extra = searchSfpCache(
                             ^
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/low_gist.c:410:28: warning: incompatible integer to pointer conversion assigning to 'void *' from 'int' [-Wint-conversion]
  fcinfo->flinfo->fn_extra = searchSfpCache(
                           ^ ~~~~~~~~~~~~~~~
2 warnings generated.
/usr/bin/clang-7 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o guc.bc /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/guc.c
/usr/bin/clang-7 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o cache.bc /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/cache.c
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/cache.c:312:17: warning: assigning to 'MemoryContextMethods *' (aka 'struct MemoryContextMethods *') from 'const MemoryContextMethods *' (aka 'const struct MemoryContextMethods *') discards qualifiers [-Wincompatible-pointer-types-discards-qualifiers]
    methodsOrig = ctx->methods;
                ^ ~~~~~~~~~~~~
1 warning generated.
/usr/bin/clang-7 -xc++ -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -emit-llvm -c -o adapter.bc /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/adapter.cpp
opt-7 -module-summary -f adapter.bc -o adapter.bc
/usr/bin/clang-7 -Wno-ignored-attributes -fno-strict-aliasing -fwrapv -O2  -I/usr/local/include -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code -DRDKITVER='"007300"'   -I. -I/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit -I/usr/include/postgresql/11/server -I/usr/include/postgresql/internal  -Wdate-time -D_FORTIFY_SOURCE=2 -D_GNU_SOURCE -I/usr/include/libxml2  -I/usr/include/mit-krb5 -flto=thin -emit-llvm -c -o bitstring.bc /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/bitstring.c
make[2]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/build-11'
(cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code; doxygen doxygen/doxygen.config)
warning: Tag `SYMBOL_CACHE_SIZE' at line 337 of file `doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag `SHOW_DIRECTORIES' at line 557 of file `doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag `HTML_ALIGN_MEMBERS' at line 971 of file `doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag `USE_INLINE_TREES' at line 1162 of file `doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag `XML_SCHEMA' at line 1425 of file `doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: Tag `XML_DTD' at line 1431 of file `doxygen/doxygen.config' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
warning: doxygen no longer ships with the FreeSans font.
You may want to clear or change DOT_FONTNAME.
Otherwise you run the risk that the wrong font is being used for dot generated graphs.
Searching for include files...
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Searching INPUT for files to process...
Searching for files in directory /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol
Searching for files in directory /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions
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Searching for files in directory /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers
Searching for files in directory /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral
Searching for files in directory /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/hash
Searching for files in directory /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/hash/detail
Searching for files in directory /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost
Searching for files in directory /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom
Searching for files in directory /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField
Searching for files in directory /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF
Searching for files in directory /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF
Searching for files in directory /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics
Searching for files in directory /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Alignment
Searching for files in directory /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/EigenSolvers
Searching for files in directory /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Optimizer
Searching for files in directory /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry
Searching for files in directory /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Features
Searching for files in directory /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ChemicalFeatures
Reading and parsing tag files
Parsing files
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/atomic_data.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/atomic_data.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/AtomIterators.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/AtomIterators.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Bond.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Bond.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/BondIterators.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/BondIterators.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Canon.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Canon.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/CartesianProduct.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/CartesianProduct.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/Enumerate.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/Enumerate.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/EnumerateBase.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/EnumerateBase.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/EnumerateTypes.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/EnumerateTypes.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/EnumerationPickler.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/EnumerationPickler.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/EnumerationStrategyBase.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/EnumerationStrategyBase.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/EvenSamplePairs.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/EvenSamplePairs.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/RandomSample.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/RandomSample.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/RandomSampleAllBBs.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Enumerate/RandomSampleAllBBs.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/PreprocessRxn.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/PreprocessRxn.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Reaction.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Reaction.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionFingerprints.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionFingerprints.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionParser.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionParser.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionPickler.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionPickler.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionRunner.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionRunner.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionUtils.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionUtils.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/SanitizeRxn.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/SanitizeRxn.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/ChemTransforms.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/ChemTransforms.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/MolFragmenter.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/MolFragmenter.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Chirality.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Chirality.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Conformer.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Conformer.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/DepictUtils.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/DepictUtils.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/EmbeddedFrag.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/EmbeddedFrag.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/RDDepictor.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/RDDepictor.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/AUTOCORR2D.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/AUTOCORR2D.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/AUTOCORR3D.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/AUTOCORR3D.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/ConnectivityDescriptors.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/ConnectivityDescriptors.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Crippen.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Crippen.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Data3Ddescriptors.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Data3Ddescriptors.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/EEM.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/EEM.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/GETAWAY.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/GETAWAY.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Lipinski.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Lipinski.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/MolData3Ddescriptors.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/MolData3Ddescriptors.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/MolDescriptors.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/MolDescriptors.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/MolDescriptors3D.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/MolDescriptors3D.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/MolSurf.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/MolSurf.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/MORSE.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/MORSE.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/MQN.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/MQN.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/PBF.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/PBF.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/PMI.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/PMI.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Property.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Property.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/RDF.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/RDF.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/RegisterDescriptor.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/RegisterDescriptor.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/USRDescriptor.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/USRDescriptor.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/WHIM.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/WHIM.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/details.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/details.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/Embedder.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/Embedder.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/FileParsers.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/FileParsers.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/FileParserUtils.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/FileParserUtils.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolFileStereochem.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolFileStereochem.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolSupplier.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolSupplier.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolWriters.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolWriters.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/ProximityBonds.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/ProximityBonds.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SequenceParsers.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SequenceParsers.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SequenceWriters.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SequenceWriters.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterCatalog.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterCatalog.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterCatalogEntry.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterCatalogEntry.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatcherBase.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatcherBase.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatchers.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatchers.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/Filters.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/Filters.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FunctionalGroupHierarchy.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FunctionalGroupHierarchy.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairs.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairs.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintGenerator.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintGenerator.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Fingerprints.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Fingerprints.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintUtil.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintUtil.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MACCS.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MACCS.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganFingerprints.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganFingerprints.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Composition2N.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Composition2N.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/DebugTrace.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/DebugTrace.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/DuplicatedSeedCache.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/DuplicatedSeedCache.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/FMCS.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/FMCS.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Graph.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Graph.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/MatchTable.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/MatchTable.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/MaximumCommonSubgraph.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/MaximumCommonSubgraph.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/RingMatchTableSet.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/RingMatchTableSet.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Seed.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Seed.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/SeedSet.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/SeedSet.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/SubstructMatchCustom.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/SubstructMatchCustom.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/SubstructureCache.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/SubstructureCache.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Target.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Target.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/TargetMatch.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/TargetMatch.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionAngleM6.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionAngleM6.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/MMFF/AtomTyper.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/MMFF/AtomTyper.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/MMFF/Builder.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/MMFF/Builder.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/MMFF/MMFF.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/MMFF/MMFF.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/UFF/AtomTyper.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/UFF/AtomTyper.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/UFF/Builder.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/UFF/Builder.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/UFF/UFF.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/UFF/UFF.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatalogEntry.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatalogEntry.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatalogUtils.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatalogUtils.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatGenerator.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatGenerator.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatParams.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragCatParams.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragFPGenerator.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/FragFPGenerator.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/GraphMol.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/GraphMol.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MMPA/MMPA.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MMPA/MMPA.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/AlignMolecules.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/AlignMolecules.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/O3AAlignMolecules.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/O3AAlignMolecules.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolBundle.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolBundle.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolCatalog/MolCatalog.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolCatalog/MolCatalog.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolCatalog/MolCatalogEntry.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolCatalog/MolCatalogEntry.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolCatalog/MolCatalogParams.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolCatalog/MolCatalogParams.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/FeatureParser.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/FeatureParser.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/MolChemicalFeature.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/MolChemicalFeature.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureFactory.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureFactory.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2D.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2D.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2DCairo.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2DCairo.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2DDetails.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2DDetails.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2DQt.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2DQt.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2DSVG.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2DSVG.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2DUtils.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2DUtils.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2Dwx.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2Dwx.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MultiMolDraw2D.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MultiMolDraw2D.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolHash/MolHash.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolHash/MolHash.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolInterchange/details.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolInterchange/details.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolInterchange/MolInterchange.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolInterchange/MolInterchange.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolOps.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolOps.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolPickler.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolPickler.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogEntry.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogEntry.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogParams.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogParams.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/AcidBaseCatalog/AcidBaseCatalogUtils.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Charge.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Charge.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Fragment.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Fragment.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogEntry.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogEntry.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogParams.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogParams.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/FragmentCatalog/FragmentCatalogUtils.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Metal.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Metal.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/MolStandardize.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/MolStandardize.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Normalize.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Normalize.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Tautomer.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Tautomer.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogEntry.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogEntry.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogParams.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogParams.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TautomerCatalog/TautomerCatalogUtils.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogEntry.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogEntry.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogParams.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogParams.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/TransformCatalog/TransformCatalogUtils.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Validate.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Validate.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolTransforms/MolTransforms.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolTransforms/MolTransforms.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MonomerInfo.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MonomerInfo.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/new_canon.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/new_canon.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PartialCharges/GasteigerCharges.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PartialCharges/GasteigerCharges.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PartialCharges/GasteigerParams.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PartialCharges/GasteigerParams.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PeriodicTable.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PeriodicTable.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/QueryAtom.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/QueryAtom.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/QueryBond.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/QueryBond.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/QueryOps.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/QueryOps.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitBase.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitQueries.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RDKitQueries.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ReducedGraphs/ReducedGraphs.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ReducedGraphs/ReducedGraphs.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Resonance.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Resonance.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RGroupDecomposition/RGroupDecomp.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RGroupDecomposition/RGroupDecomp.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RingInfo.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RingInfo.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Rings.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Rings.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ROMol.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RWMol.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RWMol.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SanitException.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SanitException.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers/ShapeEncoder.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers/ShapeEncoder.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers/ShapeUtils.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers/ShapeUtils.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse/SLNAttribs.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse/SLNAttribs.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse/SLNParse.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse/SLNParse.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse/SLNParseOps.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse/SLNParseOps.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/primes.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/primes.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmartsWrite.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmartsWrite.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmilesParse.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmilesParse.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmilesParseOps.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmilesParseOps.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmilesWrite.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmilesWrite.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StereoGroup.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StereoGroup.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/Pattern.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/Pattern.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/ReCharge.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/ReCharge.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/Stereo.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/Stereo.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/StripSmallFragments.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/StripSmallFragments.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/StructChecker.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/StructChecker.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/StructCheckerOptions.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/StructCheckerOptions.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/Tautomer.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/Tautomer.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/Utilites.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/Utilites.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs/Subgraphs.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs/Subgraphs.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs/SubgraphUtils.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs/SubgraphUtils.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Substruct/SubstructMatch.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Substruct/SubstructMatch.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Substruct/SubstructUtils.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Substruct/SubstructUtils.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SubstructLibrary/SubstructLibrary.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SubstructLibrary/SubstructLibrary.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory/Snapshot.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory/Snapshot.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory/Trajectory.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory/Trajectory.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs/Catalog.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs/Catalog.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs/CatalogEntry.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs/CatalogEntry.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs/CatalogParams.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs/CatalogParams.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/base64.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/base64.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/BitOps.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/BitOps.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/BitVect.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/BitVect.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/BitVects.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/BitVects.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/BitVectUtils.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/BitVectUtils.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/DatastructsException.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/DatastructsException.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/DiscreteDistMat.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/DiscreteDistMat.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/DiscreteValueVect.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/DiscreteValueVect.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/ExplicitBitVect.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/ExplicitBitVect.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/FPBReader.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/FPBReader.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/MultiFPBReader.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/MultiFPBReader.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/SparseBitVect.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/SparseBitVect.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/SparseIntVect.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/SparseIntVect.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/AndQuery.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/AndQuery.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/EqualityQuery.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/EqualityQuery.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/GreaterEqualQuery.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/GreaterEqualQuery.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/GreaterQuery.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/GreaterQuery.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/LessEqualQuery.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/LessEqualQuery.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/LessQuery.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/LessQuery.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/OrQuery.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/OrQuery.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/Query.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/QueryObjects.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/RangeQuery.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/RangeQuery.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/SetQuery.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/SetQuery.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/XOrQuery.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query/XOrQuery.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/InfoTheory/CorrMatGenerator.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/InfoTheory/CorrMatGenerator.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/InfoTheory/InfoBitRanker.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/InfoTheory/InfoBitRanker.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/InfoTheory/InfoGainFuncs.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/InfoTheory/InfoGainFuncs.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataManip/MetricMatrixCalc/MetricFuncs.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataManip/MetricMatrixCalc/MetricFuncs.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataManip/MetricMatrixCalc/MetricMatrixCalc.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataManip/MetricMatrixCalc/MetricMatrixCalc.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/DistPicker.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/DistPicker.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/HierarchicalClusterPicker.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/HierarchicalClusterPicker.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/MaxMinPicker.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/MaxMinPicker.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/BadFileException.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/BadFileException.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/BoostEndInclude.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/BoostEndInclude.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/BoostStartInclude.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/BoostStartInclude.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Dict.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Exceptions.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Exceptions.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/export.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/export.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/FileParseException.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/FileParseException.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/hanoiSort.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/hanoiSort.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Invariant.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Invariant.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/LocaleSwitcher.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/LocaleSwitcher.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Ranking.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/Ranking.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDAny.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDAny.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDConfig.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDConfig.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDLog.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDLog.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDProps.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDProps.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDThreads.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDThreads.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDValue-doublemagic.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDValue-doublemagic.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDValue-taggedunion.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDValue-taggedunion.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDValue.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/RDValue.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/StreamOps.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/StreamOps.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/types.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/utils.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/versions.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDGeneral/versions.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/boost_numpy.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/boost_numpy.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/import_array.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/import_array.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/iterator_next.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/iterator_next.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/pyint_api.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/pyint_api.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/PySequenceHolder.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/python_streambuf.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/BoundsMatrix.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/BoundsMatrix.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/ChiralSet.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/ChiralSet.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/ChiralViolationContrib.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/ChiralViolationContrib.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/DistGeomUtils.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/DistGeomUtils.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/DistViolationContrib.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/DistViolationContrib.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/FourthDimContrib.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/FourthDimContrib.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/TriangleSmooth.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/TriangleSmooth.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/Contrib.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/Contrib.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/ForceField.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/ForceField.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/AngleBend.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/AngleBend.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/AngleConstraint.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/AngleConstraint.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/BondStretch.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/BondStretch.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Contribs.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Contribs.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/DistanceConstraint.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/DistanceConstraint.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Nonbonded.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Nonbonded.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/OopBend.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/OopBend.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Params.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Params.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/PositionConstraint.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/PositionConstraint.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/StretchBend.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/StretchBend.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/TorsionAngle.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/TorsionAngle.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/TorsionConstraint.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/TorsionConstraint.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/AngleBend.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/AngleBend.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/AngleConstraint.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/AngleConstraint.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/BondStretch.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/BondStretch.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/Contribs.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/Contribs.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/DistanceConstraint.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/DistanceConstraint.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/Inversion.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/Inversion.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/Nonbonded.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/Nonbonded.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/Params.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/Params.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/PositionConstraint.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/PositionConstraint.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/TorsionAngle.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/TorsionAngle.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/TorsionConstraint.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/TorsionConstraint.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Alignment/AlignPoints.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Alignment/AlignPoints.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/EigenSolvers/PowerEigenSolver.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/EigenSolvers/PowerEigenSolver.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Matrix.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Matrix.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Optimizer/BFGSOpt.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Optimizer/BFGSOpt.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/SquareMatrix.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/SquareMatrix.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/SymmMatrix.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/SymmMatrix.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Vector.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Vector.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Grid3D.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Grid3D.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/GridUtils.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/GridUtils.h...
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Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/point.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Transform.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Transform.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Transform2D.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Transform2D.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Transform3D.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Transform3D.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/UniformGrid3D.h...
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Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Utils.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Utils.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Features/Feature.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Features/Feature.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ChemicalFeatures/ChemicalFeature.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ChemicalFeatures/ChemicalFeature.h...
Preprocessing /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ChemicalFeatures/FreeChemicalFeature.h...
Parsing file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ChemicalFeatures/FreeChemicalFeature.h...
Building group list.../<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Contribs.h:15: warning: the name `Contribs.h' supplied as the second argument in the \file statement matches the following input files:
   /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Contribs.h
   /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/Contribs.h
Please use a more specific name by including a (larger) part of the path!
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/Contribs.h:13: warning: the name `Contribs.h' supplied as the second argument in the \file statement matches the following input files:
   /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Contribs.h
   /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/Contribs.h
Please use a more specific name by including a (larger) part of the path!

Building directory list...
Building namespace list...
Building file list...
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Flushing cached template relations that have become invalid...
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Add enum values to enums...
Searching for member function documentation...
Creating members for template instances...
Building page list...
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Computing page relations...
Determining the scope of groups...
Sorting lists...
Freeing entry tree
Determining which enums are documented
Computing member relations...
Building full member lists recursively...
Adding members to member groups.
Computing member references...
Inheriting documentation...
Generating disk names...
Adding source references...
Adding xrefitems...
Sorting member lists...
Computing dependencies between directories...
Generating citations page...
Counting data structures...
Resolving user defined references...
Finding anchors and sections in the documentation...
Transferring function references...
Combining using relations...
Adding members to index pages...
Generating style sheet...
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Generating code for file AcidBaseCatalogEntry.h...
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Generating code for file SetQuery./<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/BitOps.h:174: warning: found </c> at different nesting level (7) than expected (4)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/BitOps.h:175: warning: end of comment block while expecting command </code>
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/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/QueryOps.h:494: warning: Found unknown command `\overloadquery'
foGainFuncs.h...
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Generating docs/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/ForceField.h:133: warning: The following parameters of ForceFields::ForceField::minimize(unsigned int snapshotFreq, RDKit::SnapshotVect *snapshotVect, unsigned int maxIts=200, double forceTol=1e-4, double energyTol=1e-6) are not documented:
  parameter 'snapshotFreq'
  parameter 'snapshotVect'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/ForceField.h:139: warning: argument 'snapshotFreq' of command @param is not found in the argument list of ForceFields::ForceField::minimize(unsigned int maxIts=200, double forceTol=1e-4, double energyTol=1e-6)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/ForceField.h:139: warning: argument 'snapshotVect' of command @param is not found in the argument list of ForceFields::ForceField::minimize(unsigned int maxIts=200, double forceTol=1e-4, double energyTol=1e-6)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/AngleBend.h:31: warning: argument 'angleType' of command @param is not found in the argument list of ForceFields::MMFF::AngleBendContrib::AngleBendContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, const MMFFAngle *mmffAngleParams, const MMFFProp *mmffPropParamsCentralAtom)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/AngleBend.h:40: warning: The following parameters of ForceFields::MMFF::AngleBendContrib::AngleBendContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, const MMFFAngle *mmffAngleParams, const MMFFProp *mmffPropParamsCentralAtom) are not documented:
  parameter 'mmffAngleParams'
  parameter 'mmffPropParamsCentralAtom'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/AngleConstraint.h:27: warning: argument 'minAngle' of command @param is not found in the argument list of ForceFields::MMFF::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/AngleConstraint.h:27: warning: argument 'maxAngle' of command @param is not found in the argument list of ForceFields::MMFF::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/AngleConstraint.h:36: warning: The following parameters of ForceFields::MMFF::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst) are not documented:
  parameter 'minAngleDeg'
  parameter 'maxAngleDeg'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/BondStretch.h:28: warning: argument 'bondType' of command @param is not found in the argument list of ForceFields::MMFF::BondStretchContrib::BondStretchContrib(ForceField *owner, const unsigned int idx1, const unsigned int idx2, const MMFFBond *mmffBondParams)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/BondStretch.h:28: warning: argument 'end1Params' of command @param is not found in the argument list of ForceFields::MMFF::BondStretchContrib::BondStretchContrib(ForceField *owner, const unsigned int idx1, const unsigned int idx2, const MMFFBond *mmffBondParams)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/BondStretch.h:28: warning: argument 'end2Params' of command @param is not found in the argument list of ForceFields::MMFF::BondStretchContrib::BondStretchContrib(ForceField *owner, const unsigned int idx1, const unsigned int idx2, const MMFFBond *mmffBondParams)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/BondStretch.h:36: warning: The following parameters of ForceFields::MMFF::BondStretchContrib::BondStretchContrib(ForceField *owner, const unsigned int idx1, const unsigned int idx2, const MMFFBond *mmffBondParams) are not documented:
  parameter 'mmffBondParams'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Nonbonded.h:59: warning: The following parameters of ForceFields::MMFF::EleContrib::EleContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, double chargeTerm, boost::uint8_t dielModel, bool is1_4) are not documented:
  parameter 'chargeTerm'
  parameter 'dielModel'
  parameter 'is1_4'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Params.h:161: warning: argument 'mmffArom' of command @param is not found in the argument list of ForceFields::MMFF::MMFFAromCollection::getMMFFArom(const boost::uint8_t *aromatic_types=NULL)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Params.h:177: warning: The following parameters of ForceFields::MMFF::MMFFAromCollection::getMMFFArom(const boost::uint8_t *aromatic_types=NULL) are not documented:
  parameter 'aromatic_types'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Params.h:1086: warning: The following parameters of ForceFields::MMFF::MMFFOopCollection::getMMFFOop(const bool isMMFFs=false, const std::string &mmffOop="") are not documented:
  parameter 'isMMFFs'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Params.h:1215: warning: The following parameters of ForceFields::MMFF::MMFFTorCollection::getMMFFTor(const bool isMMFFs, const std::string &mmffTor="") are not documented:
  parameter 'isMMFFs'
 for compound KeyErrorException...
Generating docs for compound MolData3Ddescriptors...
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Generating docs for compound ForceFields::MMFF::AngleBendContrib...
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Generating docs for compound ForceFields::MMFF::OopBendContrib...
Generating docs for compound ForceFields::MMFF::Posi/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/PositionConstraint.h:28: warning: argument 'minDispl' of command @param is not found in the argument list of ForceFields::MMFF::PositionConstraintContrib::PositionConstraintContrib(ForceField *owner, unsigned int idx, double maxDispl, double forceConst)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/StretchBend.h:32: warning: argument 'angleType' of command @param is not found in the argument list of ForceFields::MMFF::StretchBendContrib::StretchBendContrib(ForceField *owner, const unsigned int idx1, const unsigned int idx2, const unsigned int idx3, const MMFFStbn *mmffStbnParams, const MMFFAngle *mmffAngleParams, const MMFFBond *mmffBondParams1, const MMFFBond *mmffBondParams2)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/StretchBend.h:41: warning: The following parameters of ForceFields::MMFF::StretchBendContrib::StretchBendContrib(ForceField *owner, const unsigned int idx1, const unsigned int idx2, const unsigned int idx3, const MMFFStbn *mmffStbnParams, const MMFFAngle *mmffAngleParams, const MMFFBond *mmffBondParams1, const MMFFBond *mmffBondParams2) are not documented:
  parameter 'mmffStbnParams'
  parameter 'mmffAngleParams'
  parameter 'mmffBondParams1'
  parameter 'mmffBondParams2'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/TorsionAngle.h:34: warning: argument 'torsionType' of command @param is not found in the argument list of ForceFields::MMFF::TorsionAngleContrib::TorsionAngleContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, unsigned int idx4, const MMFFTor *mmffTorParams)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/TorsionAngle.h:45: warning: The following parameters of ForceFields::MMFF::TorsionAngleContrib::TorsionAngleContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, unsigned int idx4, const MMFFTor *mmffTorParams) are not documented:
  parameter 'mmffTorParams'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF/Nonbonded.h:35: warning: The following parameters of ForceFields::MMFF::VdWContrib::VdWContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, const MMFFVdWRijstarEps *mmffVdWConstants) are not documented:
  parameter 'mmffVdWConstants'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/AngleConstraint.h:27: warning: argument 'minAngle' of command @param is not found in the argument list of ForceFields::UFF::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/AngleConstraint.h:27: warning: argument 'maxAngle' of command @param is not found in the argument list of ForceFields::UFF::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/AngleConstraint.h:36: warning: The following parameters of ForceFields::UFF::AngleConstraintContrib::AngleConstraintContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, double minAngleDeg, double maxAngleDeg, double forceConst) are not documented:
  parameter 'minAngleDeg'
  parameter 'maxAngleDeg'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/Inversion.h:39: warning: The following parameters of ForceFields::UFF::InversionContrib::InversionContrib(ForceField *owner, unsigned int idx1, unsigned int idx2, unsigned int idx3, unsigned int idx4, int at2AtomicNum, bool isCBoundToO, double oobForceScalingFactor=1.0) are not documented:
  parameter 'oobForceScalingFactor'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF/PositionConstraint.h:28: warning: argument 'minDispl' of command @param is not found in the argument list of ForceFields::UFF::PositionConstraintContrib::PositionConstraintContrib(ForceField *owner, unsigned int idx, double maxDispl, double forceConst)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/RDDepictor.h:73: warning: The following parameters of RDDepict::compute2DCoords(RDKit::ROMol &mol, const RDGeom::INT_POINT2D_MAP *coordMap=0, bool canonOrient=false, bool clearConfs=true, unsigned int nFlipsPerSample=0, unsigned int nSamples=0, int sampleSeed=0, bool permuteDeg4Nodes=false, bool forceRDKit=false) are not documented:
  parameter 'forceRDKit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/RDDepictor.h:130: warning: The following parameters of RDDepict::compute2DCoordsMimicDistMat(RDKit::ROMol &mol, const DOUBLE_SMART_PTR *dmat=0, bool canonOrient=true, bool clearConfs=true, double weightDistMat=0.5, unsigned int nFlipsPerSample=3, unsigned int nSamples=100, int sampleSeed=25, bool permuteDeg4Nodes=true, bool forceRDKit=false) are not documented:
  parameter 'forceRDKit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/RDDepictor.h:162: warning: The following parameters of RDDepict::generateDepictionMatching2DStructure(RDKit::ROMol &mol, const RDKit::ROMol &reference, int confId=-1, RDKit::ROMol *referencePattern=static_cast< RDKit::ROMol * >(0), bool acceptFailure=false, bool forceRDKit=false) are not documented:
  parameter 'forceRDKit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/RDDepictor.h:170: warning: argument 'refPattern' of command @param is not found in the argument list of RDDepict::generateDepictionMatching3DStructure(RDKit::ROMol &mol, const RDKit::ROMol &reference, int confId=-1, RDKit::ROMol *referencePattern=0, bool acceptFailure=false, bool forceRDKit=false)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/RDDepictor.h:189: warning: The following parameters of RDDepict::generateDepictionMatching3DStructure(RDKit::ROMol &mol, const RDKit::ROMol &reference, int confId=-1, RDKit::ROMol *referencePattern=0, bool acceptFailure=false, bool forceRDKit=false) are not documented:
  parameter 'referencePattern'
  parameter 'forceRDKit'
tionConstraintContrib...
Generating docs for compound ForceFields::MMFF::StretchBendContrib...
Generating docs for compound ForceFields::MMFF::TorsionAngleContrib...
Generating docs for compound ForceFields::MMFF::TorsionConstraintContrib...
Generating docs for compound ForceFields::MMFF::VdWContrib...
Generating docs for namespace ForceFields::MMFF::Utils
Generating docs for namespace ForceFields::UFF
Generating docs for compound ForceFields::UFF::AngleBendContrib...
Generating docs for compound ForceFields::UFF::AngleConstraintContrib...
Generating docs for compound ForceFields::UFF::AtomicParams...
Generating docs for compound ForceFields::UFF::BondStretchContrib...
Generating docs for compound ForceFields::UFF::DistanceConstraintContrib...
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Generating docs for compound ForceFields::UFF::PositionConstraintContrib...
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Generating docs for compound ForceFields::UFF::UFFAngle...
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Generating docs for compound ForceFields::UFF::vdWContrib...
Generating docs for namespace ForceFields::UFF::Params
Generating docs for namespace ForceFields::UFF::Utils
Generating docs for namespace Invar
Generating docs for compound Invar::Invariant...
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Generating docs for compound Queries::AndQuery...
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Generating docs for compound Rankers::argless...
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Generating docs for compound RDInfoTheory::BitCorrMatGenerator...
Generating docs for compound R/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/QueryOps.h:485: warning: Found unknown command `\overloadquery'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/QueryOps.h:494: warning: Found unknown command `\overloadquery'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SequenceParsers.h:94: warning: argument 'seq' of command @param is not found in the argument list of RDKit::HELMToMol(const char *helm, bool sanitize=true)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/SequenceParsers.h:99: warning: The following parameters of RDKit::HELMToMol(const char *helm, bool sanitize=true) are not documented:
  parameter 'helm'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Fingerprints.h:105: warning: The following parameters of RDKit::LayeredFingerprintMol(const ROMol &mol, unsigned int layerFlags=0xFFFFFFFF, unsigned int minPath=1, unsigned int maxPath=7, unsigned int fpSize=2048, std::vector< unsigned int > *atomCounts=0, ExplicitBitVect *setOnlyBits=0, bool branchedPaths=true, const std::vector< boost::uint32_t > *fromAtoms=0) are not documented:
  parameter 'fromAtoms'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/QueryOps.h:485: warning: Found unknown command `\overloadquery'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/QueryOps.h:494: warning: Found unknown command `\overloadquery'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/FileParsers.h:267: warning: argument 'fName' of command @param is not found in the argument list of RDKit::MolToPDBFile(const ROMol &mol, const std::string &fname, int confId=-1, unsigned int flavor=0)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/FileParsers.h:278: warning: The following parameters of RDKit::MolToPDBFile(const ROMol &mol, const std::string &fname, int confId=-1, unsigned int flavor=0) are not documented:
  parameter 'fname'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse/SmilesWrite.h:71: warning: The following parameters of RDKit::MolToSmiles(const ROMol &mol, bool doIsomericSmiles=true, bool doKekule=false, int rootedAtAtom=-1, bool canonical=true, bool allBondsExplicit=false, bool allHsExplicit=false, bool doRandom=false) are not documented:
  parameter 'doRandom'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/ChemTransforms.h:236: warning: argument 'delimiter' of command @param is not found in the argument list of RDKit::parseQueryDefFile(const std::string &filename, std::map< std::string, ROMOL_SPTR > &queryDefs, bool standardize=true)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/ChemTransforms.h:236: warning: argument 'comment' of command @param is not found in the argument list of RDKit::parseQueryDefFile(const std::string &filename, std::map< std::string, ROMOL_SPTR > &queryDefs, bool standardize=true)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/ChemTransforms.h:236: warning: argument 'nameColumn' of command @param is not found in the argument list of RDKit::parseQueryDefFile(const std::string &filename, std::map< std::string, ROMOL_SPTR > &queryDefs, bool standardize=true)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/ChemTransforms.h:236: warning: argument 'smartsColumn' of command @param is not found in the argument list of RDKit::parseQueryDefFile(const std::string &filename, std::map< std::string, ROMOL_SPTR > &queryDefs, bool standardize=true)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Fingerprints.h:26: warning: argument 'useBondOrders' of command @param is not found in the argument list of RDKit::RDKFingerprintMol(const ROMol &mol, unsigned int minPath=1, unsigned int maxPath=7, unsigned int fpSize=2048, unsigned int nBitsPerHash=2, bool useHs=true, double tgtDensity=0.0, unsigned int minSize=128, bool branchedPaths=true, bool useBondOrder=true, std::vector< boost::uint32_t > *atomInvariants=0, const std::vector< boost::uint32_t > *fromAtoms=0, std::vector< std::vector< boost::uint32_t > > *atomBits=0, std::map< boost::uint32_t, std::vector< std::vector< int > > > *bitInfo=0)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Fingerprints.h:53: warning: The following parameters of RDKit::RDKFingerprintMol(const ROMol &mol, unsigned int minPath=1, unsigned int maxPath=7, unsigned int fpSize=2048, unsigned int nBitsPerHash=2, bool useHs=true, double tgtDensity=0.0, unsigned int minSize=128, bool branchedPaths=true, bool useBondOrder=true, std::vector< boost::uint32_t > *atomInvariants=0, const std::vector< boost::uint32_t > *fromAtoms=0, std::vector< std::vector< boost::uint32_t > > *atomBits=0, std::map< boost::uint32_t, std::vector< std::vector< int > > > *bitInfo=0) are not documented:
  parameter 'useBondOrder'
  parameter 'bitInfo'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionRunner.h:96: warning: The following parameters of RDKit::reduceProductToSideChains(const ROMOL_SPTR &product, bool addDummyAtoms=true) are not documented:
  parameter 'product'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms/ChemTransforms.h:111: warning: argument 'useChirality' of command @param is not found in the argument list of RDKit::replaceCore(const ROMol &mol, const ROMol &core, const MatchVectType &matchVect, bool replaceDummies=true, bool labelByIndex=false, bool requireDummyMatch=false)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionRunner.h:64: warning: argument 'reactantTemplateIdx' of command @param is not found in the argument list of RDKit::run_Reactant(const ChemicalReaction &rxn, const ROMOL_SPTR &reactant, unsigned int reactantIdx)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/ReactionRunner.h:77: warning: The following parameters of RDKit::run_Reactant(const ChemicalReaction &rxn, const ROMOL_SPTR &reactant, unsigned int reactantIdx) are not documented:
  parameter 'rxn'
  parameter 'reactantIdx'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintGenerator.h:107: warning: The following parameters of RDKit::AtomEnvironment::getBitId(FingerprintArguments< OutputType > *arguments, const std::vector< std::uint32_t > *atomInvariants, const std::vector< std::uint32_t > *bondInvariants, const AdditionalOutput *AdditionalOutput, const bool hashResults=false) const=0 are not documented:
  parameter 'AdditionalOutput'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Reaction.h:207: warning: argument 'maxProducts' of command @param is not found in the argument list of RDKit::ChemicalReaction::runReactants(const MOL_SPTR_VECT reactants, unsigned int numProducts=1000) const
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Reaction.h:221: warning: The following parameters of RDKit::ChemicalReaction::runReactants(const MOL_SPTR_VECT reactants, unsigned int numProducts=1000) const are not documented:
  parameter 'numProducts'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatchers.h:415: warning: argument 'matches' of command @param is not found in the argument list of RDKit::ExclusionList::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const inherited from member getMatches at line 100 in file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatcherBase.h
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatchers.h:415: warning: The following parameters of RDKit::ExclusionList::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const are not documented:
  parameter 'matchVect'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatcherBase.h:100: warning: argument 'matches' of command @param is not found in the argument list of RDKit::FilterMatcherBase::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const=0
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatcherBase.h:106: warning: The following parameters of RDKit::FilterMatcherBase::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const=0 are not documented:
  parameter 'matchVect'
DInfoTheory::InfoBitRanker...
Generating docs for namespace RDKit
Generating docs for compound RDKit::AdditionalOutput...
Generating docs for compound RDKit::AromaticAtomIterator_...
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Generating docs for compound RDKit::AtomEnvironment...
Generating docs for compound RDKit::AtomEnvironmentGenerator...
Generating docs for compound RDKit::atomicData...
Generating docs for compound RDKit::AtomInvariantsGenerator...
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Generating docs for compound RDKit::AtomPDBResidueInfo...
Generating docs for compound RDKit::AtomRingQuery...
Generating docs for compound RDKit::BadFileException...
Generating docs for compound RDKit::Bond...
Generating docs for compound RDKit::BondInvariantsGenerator...
Generating docs for compound RDKit::BondIterator_...
Generating docs for compound RDKit::CachedMolHolder...
Generating docs for compound RDKit::CachedSmilesMolHolder...
Generating docs for compound RDKit::CachedTrustedSmilesMolHolder...
Generating docs for compound RDKit::CartesianProductStrategy...
Generating docs for compound RDKit::charptr_functor...
Generating docs for compound RDKit::ChemicalReaction...
Generating docs for compound RDKit::ChemicalReactionException...
Generating docs for compound RDKit::ChemicalReactionParserException...
Generating docs for compound RDKit::Conformer...
Generating docs for compound RDKit::ConformerException...
Generating docs for compound RDKit::ConstBondIterator_...
Generating docs for compound RDKit::CXXAtomIterator...
Generating docs for nested compound RDKit::CXXAtomIterator::CXXAtomIter...
Generating docs for compound RDKit::CXXBondIterator...
Generating docs for nested compound RDKit::CXXBondIterator::CXXBondIter...
Generating docs for compound RDKit::Dict...
Generating docs for nested compound RDKit::Dict::Pair...
Generating docs for compound RDKit::DiscreteDistMat...
Generating docs for compound RDKit::DiscreteValueVect...
Generating docs for compound RDKit::EnumerateLibrary...
Generating docs for compound RDKit::EnumerateLibraryBase...
Generating docs for compound RDKit::EnumerationParams...
Generating docs for compound RDKit::EnumerationStrategyBase...
Generating docs for compound RDKit::EnumerationStrategyException...
Generating docs for compound RDKit::EvenSamplePairsStrategy...
Generating docs for compound RDKit::ExclusionList...
Generating docs for compound RDKit::FeatureFileParseException...
Generating docs for compound RDKit::FileParseException...
Generating docs for compound RDKit::FilterCatalog...
Generating docs for compound RDKit::FilterCatalogEntry...
Generating docs for compound RDKit::FilterCatalogParams...
Generating docs for compound RDKit::FilterData_t...
Generating docs for compound RDKit::FilterHierarchyMatcher...
Generating docs for compound RDKit::FilterMatch...
Generating docs for compound RDKit::FilterMatcherBase...
Generating docs for compound RDKit::FilterProperty_t...
Generating docs for compound RDKit::FingerprintArguments...
Generating docs for compound RDKit::FingerprintGenerator...
Generating docs for compound RDKit::ForwardSDMolSupplier...
Generating docs for compound RDKit::FPBReader...
Generating docs for compound RDKit::FPHolderBase...
Generating docs for compound RDKit::FragCatalogEntry...
Generating docs for compound RDKit::FragCatGenerator...
Generating docs for compound RDKit::FragCatParams...
Generating docs for compound RDKit::FragFPGenerator...
Generating docs for compound RDKit::GasteigerParams...
Generating docs for compound RDKit::HasPropQuery...
Generating docs for compound RDKit::HasPropWithValueQuery...
Generating docs for compound RDKit::HasPropWithValueQuery< TargetPtr, std::string >...
Generating docs for compound RDKit::HeteroatomIterator_...
Generating docs for compound RDKit::larger_of...
Generating docs for compound RDKit::ltDouble...
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Generating docs for compound RDKit::MCSAtomCompareParameters...
Generating docs for compound RDKit::MCSBo/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2D.h:176: warning: The following parameters of RDKit::MolDraw2D::drawMolecule(const ROMol &mol, const std::string &legend, const std::vector< int > *highlight_atoms, const std::vector< int > *highlight_bonds, const std::map< int, DrawColour > *highlight_atom_map=NULL, const std::map< int, DrawColour > *highlight_bond_map=NULL, const std::map< int, double > *highlight_radii=NULL, int confId=-1) are not documented:
  parameter 'highlight_bonds'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2D.h:207: warning: argument 'highlight_atom_map' of command @param is not found in the argument list of RDKit::MolDraw2D::drawMolecules(const std::vector< ROMol * > &mols, const std::vector< std::string > *legends=NULL, const std::vector< std::vector< int > > *highlight_atoms=NULL, const std::vector< std::vector< int > > *highlight_bonds=NULL, const std::vector< std::map< int, DrawColour > > *highlight_atom_maps=NULL, const std::vector< std::map< int, DrawColour > > *highlight_bond_maps=NULL, const std::vector< std::map< int, double > > *highlight_radii=NULL, const std::vector< int > *confIds=NULL)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2D.h:207: warning: argument 'highlight_bond_map' of command @param is not found in the argument list of RDKit::MolDraw2D::drawMolecules(const std::vector< ROMol * > &mols, const std::vector< std::string > *legends=NULL, const std::vector< std::vector< int > > *highlight_atoms=NULL, const std::vector< std::vector< int > > *highlight_bonds=NULL, const std::vector< std::map< int, DrawColour > > *highlight_atom_maps=NULL, const std::vector< std::map< int, DrawColour > > *highlight_bond_maps=NULL, const std::vector< std::map< int, double > > *highlight_radii=NULL, const std::vector< int > *confIds=NULL)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2D.h:207: warning: argument 'confId' of command @param is not found in the argument list of RDKit::MolDraw2D::drawMolecules(const std::vector< ROMol * > &mols, const std::vector< std::string > *legends=NULL, const std::vector< std::vector< int > > *highlight_atoms=NULL, const std::vector< std::vector< int > > *highlight_bonds=NULL, const std::vector< std::map< int, DrawColour > > *highlight_atom_maps=NULL, const std::vector< std::map< int, DrawColour > > *highlight_bond_maps=NULL, const std::vector< std::map< int, double > > *highlight_radii=NULL, const std::vector< int > *confIds=NULL)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/MolDraw2D.h:231: warning: The following parameters of RDKit::MolDraw2D::drawMolecules(const std::vector< ROMol * > &mols, const std::vector< std::string > *legends=NULL, const std::vector< std::vector< int > > *highlight_atoms=NULL, const std::vector< std::vector< int > > *highlight_bonds=NULL, const std::vector< std::map< int, DrawColour > > *highlight_atom_maps=NULL, const std::vector< std::map< int, DrawColour > > *highlight_bond_maps=NULL, const std::vector< std::map< int, double > > *highlight_radii=NULL, const std::vector< int > *confIds=NULL) are not documented:
  parameter 'highlight_bonds'
  parameter 'highlight_atom_maps'
  parameter 'highlight_bond_maps'
  parameter 'confIds'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Resonance.h:56: warning: argument 'numThreads' of command @param is not found in the argument list of RDKit::ResonanceMolSupplier::ResonanceMolSupplier(ROMol &mol, unsigned int flags=0, unsigned int maxStructs=1000)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatchers.h:322: warning: argument 'matches' of command @param is not found in the argument list of RDKit::SmartsMatcher::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const inherited from member getMatches at line 100 in file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatcherBase.h
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatchers.h:322: warning: The following parameters of RDKit::SmartsMatcher::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const are not documented:
  parameter 'matchVect'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolSupplier.h:206: warning: argument 'delimiter' of command @param is not found in the argument list of RDKit::SmilesMolSupplier::SmilesMolSupplier(const std::string &fileName)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolSupplier.h:206: warning: argument 'smilesColumn' of command @param is not found in the argument list of RDKit::SmilesMolSupplier::SmilesMolSupplier(const std::string &fileName)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolSupplier.h:206: warning: argument 'nameColumn' of command @param is not found in the argument list of RDKit::SmilesMolSupplier::SmilesMolSupplier(const std::string &fileName)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolSupplier.h:206: warning: argument 'titleLine' of command @param is not found in the argument list of RDKit::SmilesMolSupplier::SmilesMolSupplier(const std::string &fileName)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers/MolSupplier.h:206: warning: argument 'sanitize' of command @param is not found in the argument list of RDKit::SmilesMolSupplier::SmilesMolSupplier(const std::string &fileName)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairGenerator.h:103: warning: The following parameters of RDKit::AtomPair::AtomPairAtomEnv::getBitId(FingerprintArguments< OutputType > *arguments, const std::vector< std::uint32_t > *atomInvariants, const std::vector< std::uint32_t > *bondInvariants, const AdditionalOutput *AdditionalOutput, const bool hashResults=false) const are not documented:
  parameter 'AdditionalOutput'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/AtomPairs.h:121: warning: The following parameters of RDKit::AtomPairs::getHashedAtomPairFingerprint(const ROMol &mol, unsigned int nBits=2048, unsigned int minLength=1, unsigned int maxLength=maxPathLen - 1, const std::vector< boost::uint32_t > *fromAtoms=0, const std::vector< boost::uint32_t > *ignoreAtoms=0, const std::vector< boost::uint32_t > *atomInvariants=0, bool includeChirality=false, bool use2D=true, int confId=-1) are not documented:
  parameter 'confId'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/FingerprintUtil.h:77: warning: The following parameters of RDKit::AtomPairs::getTopologicalTorsionCode(const std::vector< std::uint32_t > &atomCodes, bool includeChirality=false) are not documented:
  parameter 'includeChirality'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Canon.h:113: warning: The following parameters of RDKit::Canon::canonicalizeFragment(ROMol &mol, int atomIdx, std::vector< AtomColors > &colors, const std::vector< unsigned int > &ranks, MolStack &molStack, const boost::dynamic_bitset<> *bondsInPlay=0, const std::vector< std::string > *bondSymbols=0, bool doIsomericSmiles=false, bool doRandom=false) are not documented:
  parameter 'bondsInPlay'
  parameter 'bondSymbols'
  parameter 'doIsomericSmiles'
  parameter 'doRandom'
ndCompareParameters...
Generating docs for compound RDKit::MCSParameters...
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Generating docs for compound RDKit::PeriodicTable...
Generating docs for compound RDKit::QueryAtom...
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Generating docs for namespace RDKit::AtomPairs
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Generating docs for compound RDKit::Canon::bondholder...
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Generating docs for compound RDKit::Canon::ChiralAtomCompareFunct/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Lipinski.h:45: warning: argument 'strict' of command @param is not found in the argument list of RDKit::Descriptors::calcNumRotatableBonds(const ROMol &mol, NumRotatableBondsOptions useStrictDefinition=Default)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Lipinski.h:52: warning: The following parameters of RDKit::Descriptors::calcNumRotatableBonds(const ROMol &mol, NumRotatableBondsOptions useStrictDefinition=Default) are not documented:
  parameter 'useStrictDefinition'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/USRDescriptor.h:79: warning: The following parameters of RDKit::Descriptors::USRCAT(const ROMol &mol, std::vector< double > &descriptor, std::vector< std::vector< unsigned int >> &atomIds, int confId=-1) are not documented:
  parameter 'atomIds'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatchers.h:86: warning: argument 'matches' of command @param is not found in the argument list of RDKit::FilterMatchOps::And::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const inherited from member getMatches at line 100 in file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatcherBase.h
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatchers.h:86: warning: The following parameters of RDKit::FilterMatchOps::And::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const are not documented:
  parameter 'matchVect'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatchers.h:204: warning: argument 'matches' of command @param is not found in the argument list of RDKit::FilterMatchOps::Not::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const inherited from member getMatches at line 100 in file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatcherBase.h
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatchers.h:204: warning: The following parameters of RDKit::FilterMatchOps::Not::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const are not documented:
  parameter 'matchVect'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatchers.h:148: warning: argument 'matches' of command @param is not found in the argument list of RDKit::FilterMatchOps::Or::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const inherited from member getMatches at line 100 in file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatcherBase.h
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/FilterMatchers.h:148: warning: The following parameters of RDKit::FilterMatchOps::Or::getMatches(const ROMol &mol, std::vector< FilterMatch > &matchVect) const are not documented:
  parameter 'matchVect'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MMPA/MMPA.h:36: warning: The following parameters of RDKit::MMPA::fragmentMol(const ROMol &mol, std::vector< std::pair< ROMOL_SPTR, ROMOL_SPTR > > &result, unsigned int maxCuts=3, unsigned int maxCutBonds=20, const std::string &pattern="[#6+0;!$(*=,#[!#6])]!@!=!#[*]") are not documented:
  parameter 'pattern'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MMPA/MMPA.h:57: warning: The following parameters of RDKit::MMPA::fragmentMol(const ROMol &mol, std::vector< std::pair< ROMOL_SPTR, ROMOL_SPTR > > &result, unsigned int minCuts, unsigned int maxCuts, unsigned int maxCutBonds, const std::string &pattern="[#6+0;!$(*=,#[!#6])]!@!=!#[*]") are not documented:
  parameter 'pattern'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolOps.h:645: warning: The following parameters of RDKit::MolOps::getAdjacencyMatrix(const ROMol &mol, bool useBO=false, int emptyVal=0, bool force=false, const char *propNamePrefix=0, const boost::dynamic_bitset<> *bondsToUse=0) are not documented:
  parameter 'bondsToUse'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolOps.h:257: warning: The following parameters of RDKit::MolOps::mergeQueryHs(const ROMol &mol, bool mergeUnmappedOnly=false) are not documented:
  parameter 'mergeUnmappedOnly'
or...
Generating docs for compound RDKit::Canon::MolStackElem...
Generating docs for compound RDKit::Canon::MolStackUnion...
Generating docs for compound RDKit::Canon::SpecialChiralityAtomCompareFunctor...
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Generating docs for namespace RDKit::common_properties
Generating docs for namespace RDKit::constants
Generating docs for namespace RDKit::Descriptors
Generating docs for compound RDKit::Descriptors::CrippenParamCollection...
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Generating docs for namespace RDKit::detail
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Generating docs for namespace RDKit::DTags
Generating docs for namespace RDKit::EnumerationStrategyPickler
Generating docs for namespace RDKit::EnumerationTypes
Generating docs for namespace RDKit::FileParserUtils
Generating docs for namespace RDKit::FilterMatchOps
Generating docs for compound RDKit::FilterMatchOps::And...
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Generating docs for namespace RDKit::FMCS
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Generating docs for namespace RDKit::Local
Generating docs for namespace RDKit::MACCSFingerprints
Generating docs for namespace RDKit::MMFF
Generating docs for compound RDKit::MMFF::MMFFAtomProperties...
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Generating docs for namespace RDKit::MMFF::Tools
Generating docs for compound RDKit::MMFF::Tools::DefaultTorsionBondSmarts...
Generating docs for namespace RDKit::MMPA
Generating docs for namespace RDKit::MolAlign
Generating docs for compound RDKit::MolAlign::LAP...
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Generating docs for compound RDKit::MolAlign::MolHistogram...
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Generating docs for namespace RDKit::MolDraw2D_detail
Generating docs for namespace RDKit::MolDraw2DUtils
Generating docs for namespace RDKit::MolFragmenter
Generating docs for compound RDKit::MolFragmenter::FragmenterBondType...
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Generating docs for compound RDKit::MolInterchange::JSONParseParameters...
Generating docs for namespace RDKit::MolOps
Generating docs for compound RDKit::MolOps::AdjustQueryParameters...
Generating docs for namespace RDKit::MolShapes
Generating docs for namespace RDKit::MolStandardize
Gen/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.h:189: warning: argument 'OutputType' of command @param is not found in the argument list of RDKit::MorganFingerprint::getMorganGenerator(const unsigned int radius, const bool countSimulation=true, const bool includeChirality=false, const bool useBondTypes=true, const bool onlyNonzeroInvariants=false, AtomInvariantsGenerator *atomInvariantsGenerator=nullptr, BondInvariantsGenerator *bondInvariantsGenerator=nullptr, const std::uint32_t fpSize=2048, const std::vector< std::uint32_t > countBounds={1, 2, 4, 8}, const bool ownsAtomInvGen=false, const bool ownsBondInvGen=false)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.h:189: warning: argument 'radiu' of command @param is not found in the argument list of RDKit::MorganFingerprint::getMorganGenerator(const unsigned int radius, const bool countSimulation=true, const bool includeChirality=false, const bool useBondTypes=true, const bool onlyNonzeroInvariants=false, AtomInvariantsGenerator *atomInvariantsGenerator=nullptr, BondInvariantsGenerator *bondInvariantsGenerator=nullptr, const std::uint32_t fpSize=2048, const std::vector< std::uint32_t > countBounds={1, 2, 4, 8}, const bool ownsAtomInvGen=false, const bool ownsBondInvGen=false)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.h:228: warning: The following parameters of RDKit::MorganFingerprint::getMorganGenerator(const unsigned int radius, const bool countSimulation=true, const bool includeChirality=false, const bool useBondTypes=true, const bool onlyNonzeroInvariants=false, AtomInvariantsGenerator *atomInvariantsGenerator=nullptr, BondInvariantsGenerator *bondInvariantsGenerator=nullptr, const std::uint32_t fpSize=2048, const std::vector< std::uint32_t > countBounds={1, 2, 4, 8}, const bool ownsAtomInvGen=false, const bool ownsBondInvGen=false) are not documented:
  parameter 'radius'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganGenerator.h:151: warning: The following parameters of RDKit::MorganFingerprint::MorganAtomEnv::getBitId(FingerprintArguments< OutputType > *arguments, const std::vector< std::uint32_t > *atomInvariants, const std::vector< std::uint32_t > *bondInvariants, const AdditionalOutput *AdditionalOutput, const bool hashResults=false) const are not documented:
  parameter 'AdditionalOutput'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/MorganFingerprints.h:152: warning: The following parameters of RDKit::MorganFingerprints::getHashedFingerprint(const ROMol &mol, unsigned int radius, unsigned int nBits=2048, std::vector< boost::uint32_t > *invariants=0, const std::vector< boost::uint32_t > *fromAtoms=0, bool useChirality=false, bool useBondTypes=true, bool onlyNonzeroInvariants=false, BitInfoMap *atomsSettingBits=0) are not documented:
  parameter 'nBits'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.h:109: warning: argument 'useCountSimulation' of command @param is not found in the argument list of RDKit::RDKitFP::getRDKitFPGenerator(const unsigned int minPath=1, const unsigned int maxPath=7, const bool useHs=true, const bool branchedPaths=true, const bool useBondOrder=true, AtomInvariantsGenerator *atomInvariantsGenerator=nullptr, const bool countSimulation=true, const std::vector< std::uint32_t > countBounds={1, 2, 4, 8}, const std::uint32_t fpSize=2048, const bool ownsAtomInvGen=false)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.h:133: warning: The following parameters of RDKit::RDKitFP::getRDKitFPGenerator(const unsigned int minPath=1, const unsigned int maxPath=7, const bool useHs=true, const bool branchedPaths=true, const bool useBondOrder=true, AtomInvariantsGenerator *atomInvariantsGenerator=nullptr, const bool countSimulation=true, const std::vector< std::uint32_t > countBounds={1, 2, 4, 8}, const std::uint32_t fpSize=2048, const bool ownsAtomInvGen=false) are not documented:
  parameter 'countSimulation'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.h:35: warning: argument 'useCountSimulation' of command @param is not found in the argument list of RDKit::RDKitFP::RDKitFPArguments< OutputType >::RDKitFPArguments(unsigned int minPath, unsigned int maxPath, bool useHs, bool branchedPaths, bool useBondOrder, const bool countSimulation, const std::vector< std::uint32_t > countBounds, const std::uint32_t fpSize)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.h:52: warning: The following parameters of RDKit::RDKitFP::RDKitFPArguments::RDKitFPArguments(unsigned int minPath, unsigned int maxPath, bool useHs, bool branchedPaths, bool useBondOrder, const bool countSimulation, const std::vector< std::uint32_t > countBounds, const std::uint32_t fpSize) are not documented:
  parameter 'countSimulation'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/RDKitFPGenerator.h:75: warning: The following parameters of RDKit::RDKitFP::RDKitFPAtomEnv::getBitId(FingerprintArguments< OutputType > *arguments, const std::vector< std::uint32_t > *atomInvariants, const std::vector< std::uint32_t > *bondInvariants, const AdditionalOutput *AdditionalOutput, const bool hashResults=false) const are not documented:
  parameter 'AdditionalOutput'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ReducedGraphs/ReducedGraphs.h:34: warning: The following parameters of RDKit::ReducedGraphs::generateMolExtendedReducedGraph(const ROMol &mol, std::vector< boost::dynamic_bitset<> > *atomTypes=0) are not documented:
  parameter 'atomTypes'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/SanitizeRxn.h:124: warning: argument 'operationThatFailed' of command @param is not found in the argument list of RDKit::RxnOps::sanitizeRxn(ChemicalReaction &rxn, unsigned int &operationsThatFailed, unsigned int sanitizeOps=SANITIZE_ALL, const MolOps::AdjustQueryParameters &params=DefaultRxnAdjustParams())
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/SanitizeRxn.h:155: warning: The following parameters of RDKit::RxnOps::sanitizeRxn(ChemicalReaction &rxn, unsigned int &operationsThatFailed, unsigned int sanitizeOps=SANITIZE_ALL, const MolOps::AdjustQueryParameters &params=DefaultRxnAdjustParams()) are not documented:
  parameter 'operationsThatFailed'
  parameter 'params'
erating docs for compound RDKit::MolStandardize::AcidBaseCatalogEntry...
Generating docs for compound RDKit::MolStandardize::AcidBaseCatalogParams...
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Generating docs for compound RDKit::MolStandardize::ChargeCorrection...
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Generating docs for namespace RDKit::MorganFingerprint
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Generating docs for compound RDKit::MorganFingerprint::MorganFeatureAtomInvGenerator...
Generating docs for namespace RDKit::MorganFingerprints
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Generating docs for namespace RDKit::RDKitFP
Generating docs for compound RDKit::RDKitFP::RDKitFPArguments...
Generating docs for compound RDKit::RDKitFP::RDKitFPAtomEnv...
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Ge/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:87: warning: argument 'useCountSimulation' of command @param is not found in the argument list of RDKit::TopologicalTorsion::getTopologicalTorsionGenerator(const bool includeChirality=false, const uint32_t torsionAtomCount=4, AtomInvariantsGenerator *atomInvariantsGenerator=nullptr, const bool countSimulation=true, const std::vector< std::uint32_t > countBounds={1, 2, 4, 8}, const std::uint32_t fpSize=2048, const bool ownsAtomInvGen=false)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:108: warning: The following parameters of RDKit::TopologicalTorsion::getTopologicalTorsionGenerator(const bool includeChirality=false, const uint32_t torsionAtomCount=4, AtomInvariantsGenerator *atomInvariantsGenerator=nullptr, const bool countSimulation=true, const std::vector< std::uint32_t > countBounds={1, 2, 4, 8}, const std::uint32_t fpSize=2048, const bool ownsAtomInvGen=false) are not documented:
  parameter 'countSimulation'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:33: warning: argument 'useCountSimulation' of command @param is not found in the argument list of RDKit::TopologicalTorsion::TopologicalTorsionArguments< OutputType >::TopologicalTorsionArguments(const bool includeChirality, const uint32_t torsionAtomCount, const bool countSimulation, const std::vector< std::uint32_t > countBounds, const std::uint32_t fpSize)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:44: warning: The following parameters of RDKit::TopologicalTorsion::TopologicalTorsionArguments::TopologicalTorsionArguments(const bool includeChirality, const uint32_t torsionAtomCount, const bool countSimulation, const std::vector< std::uint32_t > countBounds, const std::uint32_t fpSize) are not documented:
  parameter 'countSimulation'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/TopologicalTorsionGenerator.h:57: warning: The following parameters of RDKit::TopologicalTorsion::TopologicalTorsionAtomEnv::getBitId(FingerprintArguments< OutputType > *arguments, const std::vector< std::uint32_t > *atomInvariants, const std::vector< std::uint32_t > *bondInvariants, const AdditionalOutput *AdditionalOutput, const bool hashResults=false) const are not documented:
  parameter 'AdditionalOutput'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/HierarchicalClusterPicker.h:80: warning: The following parameters of RDPickers::HierarchicalClusterPicker::pick(const double *distMat, unsigned int poolSize, unsigned int pickSize) const are not documented:
  parameter 'distMat'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/MaxMinPicker.h:54: warning: argument 'firstPicks' of command @param is not found in the argument list of RDPickers::MaxMinPicker::lazyPick(T &func, unsigned int poolSize, unsigned int pickSize) const
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/MaxMinPicker.h:54: warning: argument 'seed' of command @param is not found in the argument list of RDPickers::MaxMinPicker::lazyPick(T &func, unsigned int poolSize, unsigned int pickSize) const
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(cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book; RDBASE=/<<BUILDDIR>>/rdkit-201809.1+dfsg /usr/bin/make html)
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/usr/lib/python3/dist-packages/recommonmark/parser.py:280: UserWarning: Unsupported inline type Hardbreak
  warn("Unsupported inline type " + inline.t)
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/GettingStartedInPython.rst:2720: WARNING: Block quote ends without a blank line; unexpected unindent.
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/GettingStartedInPython.rst:2729: WARNING: Unexpected indentation.
WARNING: autodoc: failed to import module 'rdkit'; the following exception was raised:
No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.AtomPairs.Sheridan'; the following exception was raised:
No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FastSDMolSupplier'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FeatFinderCLI'; the following exception was raised:
No module named 'rdkit'
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No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FeatMaps.FeatMapParser'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FeatMaps.FeatMapPoint'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FeatMaps.FeatMapUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FeatMaps.FeatMaps'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Features'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Features.FeatDirUtilsRD'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Features.ShowFeats'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FilterCatalog'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Fingerprints'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Fingerprints.ClusterMols'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Fingerprints.DbFpSupplier'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Fingerprints.FingerprintMols'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Fingerprints.MolSimilarity'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Fingerprints.SimilarityScreener'; the following exception was raised:
No module named 'rdkit'
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No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Fraggle.FraggleSim'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FragmentCatalog'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FragmentMatcher'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Fragments'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FunctionalGroups'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.GraphDescriptors'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Graphs'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Lipinski'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MACCSkeys'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MCS'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolCatalog'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolDb'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolDb.FingerprintUtils'; the following exception was raised:
No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolDb.Loader_sa'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolKey'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolKey.InchiInfo'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolKey.MolKey'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolStandardize.rdMolStandardize'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolSurf'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.PandasTools'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.PeriodicTable'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm2D'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm2D.Generate'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm2D.Gobbi_Pharm2D'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm2D.LazyGenerator'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm2D.Matcher'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm2D.SigFactory'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm2D.Utils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm3D'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm3D.EmbedLib'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm3D.ExcludedVolume'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm3D.Pharmacophore'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.PropertyMol'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.PyMol'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.QED'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Randomize'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Recap'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.ReducedGraphs'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.SATIS'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.SaltRemover'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Scaffolds'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Scaffolds.MurckoScaffold'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Scaffolds.ScaffoldTree'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.ShowMols'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.SimpleEnum'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.SimpleEnum.Enumerator'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Subshape'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Subshape.BuilderUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Subshape.SubshapeAligner'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Subshape.SubshapeBuilder'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Subshape.SubshapeObjects'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Subshape.testCombined'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Suppliers'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Suppliers.DbMolSupplier'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Suppliers.MolSupplier'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.TemplateAlign'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.TorsionFingerprints'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.fmcs'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.fmcs.fmcs'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.inchi'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdChemReactions'; the following exception was raised:
No module named 'rdkit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/source/rdkit.Chem.rdChemicalFeatures.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdChemicalFeatures module
=================================
WARNING: autodoc: failed to import module 'rdkit.Chem.rdChemicalFeatures'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdCoordGen'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdDepictor'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdDistGeom'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdFMCS'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdFingerprintGenerator'; the following exception was raised:
No module named 'rdkit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/source/rdkit.Chem.rdForceFieldHelpers.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdForceFieldHelpers module
=================================
WARNING: autodoc: failed to import module 'rdkit.Chem.rdForceFieldHelpers'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdFreeSASA'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdMMPA'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdMolAlign'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdMolCatalog'; the following exception was raised:
No module named 'rdkit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/source/rdkit.Chem.rdMolChemicalFeatures.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdMolChemicalFeatures module
=================================
WARNING: autodoc: failed to import module 'rdkit.Chem.rdMolChemicalFeatures'; the following exception was raised:
No module named 'rdkit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/source/rdkit.Chem.rdMolDescriptors.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdMolDescriptors module
=================================
WARNING: autodoc: failed to import module 'rdkit.Chem.rdMolDescriptors'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdMolHash'; the following exception was raised:
No module named 'rdkit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/source/rdkit.Chem.rdMolInterchange.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdMolInterchange module
=================================
WARNING: autodoc: failed to import module 'rdkit.Chem.rdMolInterchange'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdMolTransforms'; the following exception was raised:
No module named 'rdkit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/source/rdkit.Chem.rdPartialCharges.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdPartialCharges module
=================================
WARNING: autodoc: failed to import module 'rdkit.Chem.rdPartialCharges'; the following exception was raised:
No module named 'rdkit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/source/rdkit.Chem.rdRGroupDecomposition.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdRGroupDecomposition module
=================================
WARNING: autodoc: failed to import module 'rdkit.Chem.rdRGroupDecomposition'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdReducedGraphs'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdSLNParse'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdShapeHelpers'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdStructChecker'; the following exception was raised:
No module named 'rdkit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/source/rdkit.Chem.rdSubstructLibrary.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdSubstructLibrary module
=================================
WARNING: autodoc: failed to import module 'rdkit.Chem.rdSubstructLibrary'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdchem'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdfiltercatalog'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdfragcatalog'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdinchi'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdmolfiles'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdmolops'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdqueries'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdtrajectory'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataManip'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataManip.Metric'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataStructs'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataStructs.BitEnsemble'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataStructs.BitEnsembleDb'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataStructs.BitUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataStructs.HierarchyVis'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataStructs.LazySignature'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataStructs.TopNContainer'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataStructs.VectCollection'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Dbase'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Dbase.DbConnection'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Dbase.DbInfo'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Dbase.DbModule'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Dbase.DbReport'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Dbase.DbResultSet'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Dbase.DbUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Dbase.StorageUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DistanceGeometry'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ForceField'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Geometry'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.AnalyzeComposite'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.BuildComposite'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Cluster'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Cluster.Butina'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Cluster.ClusterUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Cluster.ClusterVis'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Cluster.Clusters'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Cluster.Murtagh'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Cluster.Resemblance'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Cluster.Standardize'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Cluster.murtagh_test'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Composite'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Composite.AdjustComposite'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Composite.BayesComposite'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Composite.Composite'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.CompositeRun'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Data'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Data.DataUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Data.FindQuantBounds'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Data.MLData'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Data.Quantize'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Data.SplitData'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Data.Stats'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Data.Transforms'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.BuildQuantTree'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.BuildSigTree'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.CrossValidate'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.DecTree'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.Forest'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.ID3'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.PruneTree'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.QuantTree'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.SigTree'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.Tree'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.TreeUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.TreeVis'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.randomtest'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Descriptors'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Descriptors.CompoundDescriptors'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Descriptors.Descriptors'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Descriptors.MoleculeDescriptors'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Descriptors.Parser'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.EnrichPlot'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.GrowComposite'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.InfoTheory'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.InfoTheory.BitClusterer'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.InfoTheory.BitRank'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.InfoTheory.entropy'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.KNN'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.KNN.CrossValidate'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.KNN.DistFunctions'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.KNN.KNNClassificationModel'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.KNN.KNNModel'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.KNN.KNNRegressionModel'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.MLUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.MLUtils.VoteImg'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.MatOps'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.ModelPackage'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.ModelPackage.PackageUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.ModelPackage.Packager'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.NaiveBayes'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.NaiveBayes.ClassificationModel'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.NaiveBayes.CrossValidate'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Neural'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Neural.ActFuncs'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Neural.CrossValidate'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Neural.NetNode'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Neural.Network'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Neural.Trainers'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.SLT'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.SLT.Risk'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Scoring'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Scoring.Scoring'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.ScreenComposite'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.files'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Numerics'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.RDConfig'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.RDLogger'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.RDPaths'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.RDRandom'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.SimDivFilters'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.SimDivFilters.SimilarityPickers'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.TestRunner'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.Filter'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.Node'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib.DbMolSupply'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib.DbPickleSupplier'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib.SDSupply'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib.SmartsMolFilter'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib.SmartsRemover'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib.SmilesDupeFilter'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib.SmilesOutput'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib.SmilesSupply'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib.demo'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.Output'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.Supply'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.Transform'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.six'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.utils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.utils.cactvs'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.utils.chemdraw'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.utils.chemdraw_qax'; the following exception was raised:
No module named 'rdkit'
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WARNING: autodoc: failed to import module 'rdkit'; the following exception was raised:
No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.AllChem'; the following exception was raised:
No module named 'rdkit'
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No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.AtomPairs.Pairs'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.AtomPairs.Sheridan'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.AtomPairs.Torsions'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.AtomPairs.Utils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.BRICS'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.BuildFragmentCatalog'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.ChemUtils'; the following exception was raised:
No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Draw.rdMolDraw2D'; the following exception was raised:
No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
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No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.EState.EState_VSA'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.EState.Fingerprinter'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.EnumerateHeterocycles'; the following exception was raised:
No module named 'rdkit'
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No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FastSDMolSupplier'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FeatFinderCLI'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FeatMaps'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FeatMaps.FeatMapParser'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FeatMaps.FeatMapPoint'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FeatMaps.FeatMapUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FeatMaps.FeatMaps'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Features'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Features.FeatDirUtilsRD'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Features.ShowFeats'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FilterCatalog'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Fingerprints'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Fingerprints.ClusterMols'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Fingerprints.DbFpSupplier'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Fingerprints.FingerprintMols'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Fingerprints.MolSimilarity'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Fingerprints.SimilarityScreener'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Fraggle'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Fraggle.FraggleSim'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FragmentCatalog'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FragmentMatcher'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Fragments'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.FunctionalGroups'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.GraphDescriptors'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Graphs'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Lipinski'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MACCSkeys'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MCS'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolCatalog'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolDb'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolDb.FingerprintUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolDb.Loader'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolDb.Loader_orig'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolDb.Loader_sa'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolKey'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolKey.InchiInfo'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolKey.MolKey'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolStandardize.rdMolStandardize'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.MolSurf'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.PandasTools'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.PeriodicTable'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm2D'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm2D.Generate'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm2D.Gobbi_Pharm2D'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm2D.LazyGenerator'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm2D.Matcher'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm2D.SigFactory'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm2D.Utils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm3D'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm3D.EmbedLib'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm3D.ExcludedVolume'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Pharm3D.Pharmacophore'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.PropertyMol'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.PyMol'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.QED'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Randomize'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Recap'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.ReducedGraphs'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.SATIS'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.SaltRemover'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Scaffolds'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Scaffolds.MurckoScaffold'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Scaffolds.ScaffoldTree'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.ShowMols'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.SimpleEnum'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.SimpleEnum.Enumerator'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Subshape'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Subshape.BuilderUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Subshape.SubshapeAligner'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Subshape.SubshapeBuilder'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Subshape.SubshapeObjects'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Subshape.testCombined'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Suppliers'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Suppliers.DbMolSupplier'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.Suppliers.MolSupplier'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.TemplateAlign'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.TorsionFingerprints'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.fmcs'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.fmcs.fmcs'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.inchi'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdChemReactions'; the following exception was raised:
No module named 'rdkit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/source/rdkit.Chem.rdChemicalFeatures.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdChemicalFeatures module
=================================
WARNING: autodoc: failed to import module 'rdkit.Chem.rdChemicalFeatures'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdCoordGen'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdDepictor'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdDistGeom'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdFMCS'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdFingerprintGenerator'; the following exception was raised:
No module named 'rdkit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/source/rdkit.Chem.rdForceFieldHelpers.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdForceFieldHelpers module
=================================
WARNING: autodoc: failed to import module 'rdkit.Chem.rdForceFieldHelpers'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdFreeSASA'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdMMPA'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdMolAlign'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdMolCatalog'; the following exception was raised:
No module named 'rdkit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/source/rdkit.Chem.rdMolChemicalFeatures.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdMolChemicalFeatures module
=================================
WARNING: autodoc: failed to import module 'rdkit.Chem.rdMolChemicalFeatures'; the following exception was raised:
No module named 'rdkit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/source/rdkit.Chem.rdMolDescriptors.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdMolDescriptors module
=================================
WARNING: autodoc: failed to import module 'rdkit.Chem.rdMolDescriptors'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdMolHash'; the following exception was raised:
No module named 'rdkit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/source/rdkit.Chem.rdMolInterchange.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdMolInterchange module
=================================
WARNING: autodoc: failed to import module 'rdkit.Chem.rdMolInterchange'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdMolTransforms'; the following exception was raised:
No module named 'rdkit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/source/rdkit.Chem.rdPartialCharges.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdPartialCharges module
=================================
WARNING: autodoc: failed to import module 'rdkit.Chem.rdPartialCharges'; the following exception was raised:
No module named 'rdkit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/source/rdkit.Chem.rdRGroupDecomposition.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdRGroupDecomposition module
=================================
WARNING: autodoc: failed to import module 'rdkit.Chem.rdRGroupDecomposition'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdReducedGraphs'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdSLNParse'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdShapeHelpers'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdStructChecker'; the following exception was raised:
No module named 'rdkit'
/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/source/rdkit.Chem.rdSubstructLibrary.rst:2: WARNING: Title underline too short.

rdkit.Chem.rdSubstructLibrary module
=================================
WARNING: autodoc: failed to import module 'rdkit.Chem.rdSubstructLibrary'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdchem'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdfiltercatalog'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdfragcatalog'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdinchi'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdmolfiles'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdmolops'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdqueries'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Chem.rdtrajectory'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataManip'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataManip.Metric'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataStructs'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataStructs.BitEnsemble'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataStructs.BitEnsembleDb'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataStructs.BitUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataStructs.HierarchyVis'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataStructs.LazySignature'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataStructs.TopNContainer'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DataStructs.VectCollection'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Dbase'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Dbase.DbConnection'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Dbase.DbInfo'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Dbase.DbModule'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Dbase.DbReport'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Dbase.DbResultSet'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Dbase.DbUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Dbase.StorageUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.DistanceGeometry'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ForceField'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Geometry'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.AnalyzeComposite'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.BuildComposite'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Cluster'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Cluster.Butina'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Cluster.ClusterUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Cluster.ClusterVis'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Cluster.Clusters'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Cluster.Murtagh'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Cluster.Resemblance'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Cluster.Standardize'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Cluster.murtagh_test'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Composite'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Composite.AdjustComposite'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Composite.BayesComposite'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Composite.Composite'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.CompositeRun'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Data'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Data.DataUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Data.FindQuantBounds'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Data.MLData'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Data.Quantize'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Data.SplitData'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Data.Stats'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Data.Transforms'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.BuildQuantTree'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.BuildSigTree'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.CrossValidate'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.DecTree'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.Forest'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.ID3'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.PruneTree'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.QuantTree'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.SigTree'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.Tree'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.TreeUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.TreeVis'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.DecTree.randomtest'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Descriptors'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Descriptors.CompoundDescriptors'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Descriptors.Descriptors'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Descriptors.MoleculeDescriptors'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Descriptors.Parser'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.EnrichPlot'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.GrowComposite'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.InfoTheory'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.InfoTheory.BitClusterer'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.InfoTheory.BitRank'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.InfoTheory.entropy'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.KNN'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.KNN.CrossValidate'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.KNN.DistFunctions'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.KNN.KNNClassificationModel'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.KNN.KNNModel'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.KNN.KNNRegressionModel'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.MLUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.MLUtils.VoteImg'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.MatOps'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.ModelPackage'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.ModelPackage.PackageUtils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.ModelPackage.Packager'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.NaiveBayes'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.NaiveBayes.ClassificationModel'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.NaiveBayes.CrossValidate'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Neural'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Neural.ActFuncs'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Neural.CrossValidate'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Neural.NetNode'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Neural.Network'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Neural.Trainers'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.SLT'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.SLT.Risk'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Scoring'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.Scoring.Scoring'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.ScreenComposite'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.ML.files'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.Numerics'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.RDConfig'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.RDLogger'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.RDPaths'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.RDRandom'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.SimDivFilters'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.SimDivFilters.SimilarityPickers'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.TestRunner'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.Filter'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.Node'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib.DbMolSupply'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib.DbPickleSupplier'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib.SDSupply'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib.SmartsMolFilter'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib.SmartsRemover'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib.SmilesDupeFilter'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib.SmilesOutput'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib.SmilesSupply'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.NodeLib.demo'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.Output'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.Supply'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.VLib.Transform'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.six'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.utils'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.utils.cactvs'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.utils.chemdraw'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.utils.chemdraw_qax'; the following exception was raised:
No module named 'rdkit'
WARNING: autodoc: failed to import module 'rdkit.utils.chemutils'; the following exception was raised:
No module named 'rdkit'
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processing RDKit.tex...index Overview Install GettingStartedInPython RDKit_Book Cookbook Cartridge BackwardsIncompatibleChanges api-docs source/rdkit source/rdkit.Avalon source/rdkit.Avalon.pyAvalonTools source/rdkit.Chem source/rdkit.Chem.AtomPairs source/rdkit.Chem.AtomPairs.Pairs source/rdkit.Chem.AtomPairs.Sheridan source/rdkit.Chem.AtomPairs.Torsions source/rdkit.Chem.AtomPairs.Utils source/rdkit.Chem.ChemUtils source/rdkit.Chem.ChemUtils.AlignDepict source/rdkit.Chem.ChemUtils.BulkTester source/rdkit.Chem.ChemUtils.DescriptorUtilities source/rdkit.Chem.ChemUtils.SDFToCSV source/rdkit.Chem.ChemUtils.TemplateExpand source/rdkit.Chem.Draw source/rdkit.Chem.Draw.IPythonConsole source/rdkit.Chem.Draw.MolDrawing source/rdkit.Chem.Draw.SimilarityMaps source/rdkit.Chem.Draw.rdMolDraw2D source/rdkit.Chem.Draw.aggCanvas source/rdkit.Chem.Draw.cairoCanvas source/rdkit.Chem.Draw.canvasbase source/rdkit.Chem.Draw.mplCanvas source/rdkit.Chem.Draw.qtCanvas source/rdkit.Chem.EState 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Chapter 1.
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[]\T1/ptm/m/n/10 Cheminformatics nodes for KN-IME (dis-tributed from the KN-IME
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[]\T1/ptm/m/n/10 You can en-able sup-port for the Avalon toolkit by adding the 
ar-gu-ment
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\T1/ptm/m/n/10 load the InChI and Avalon toolkit sources from the InChI Trust a
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Chapter 3.

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[]\T1/ptm/m/n/10 IPython note-book: [][]$http : / / nbviewer . ipython . org / 
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Chapter 10.
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Chapter 1.
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[]\T1/ptm/m/n/10 Cheminformatics nodes for KN-IME (dis-tributed from the KN-IME
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Chapter 2.
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Chapter 3.

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Chapter 4.
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Chapter 5.
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[]\T1/ptm/m/n/10 IPython note-book: [][]$http : / / nbviewer . ipython . org / 
gist / greglandrum / 8351725$[][] [][]$https : / / gist . github . com / gregla
ndrum /
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Chapter 6.
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[109] [110] [111] [112] [113] [114] [115] [116] [117] [118]
Chapter 7.
[119] [120]
Chapter 8.
[121] [122] [123] [124] [125] [126] [127] [128] [129] [130] [131] [132]
[133] [134]
Chapter 9.
[135] [136]
Chapter 10.
(./RDKit.ind) [137] (./RDKit.aux)

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[]\T1/ptm/m/n/10 Cheminformatics nodes for KN-IME (dis-tributed from the KN-IME
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Chapter 2.
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[]\T1/ptm/m/n/10 You can en-able sup-port for the Avalon toolkit by adding the 
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Chapter 3.

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[]\T1/ptm/m/n/10 displays a mes-sage like: \T1/pcr/m/n/10 [12:18:01] Explicit v
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[]\T1/ptm/m/n/10 Another op-tion for Com-pute2DCoords al-lows you to gen-er-ate
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[]\T1/ptm/m/n/10 More fine-grained con-trol can be ob-tained us-ing the core fu
nc-tion \T1/pcr/m/n/10 rdkit.Chem.rdDepictor.
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2_mol2.png>] [30 <./cdk2_molgrid.png>] [31 <./cdk2_molgrid_aligned.png (PNG cop
y)>] [32] [33] [34] [35] [36] [37] [38] [39] [40] [41 <./mfp2_bit872.png> <./rd
k_bit1553.png>] [42 <./rdk_bit1553_2.png>] [43] [44 <./similarity_map_fp1.png>]
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[]\T1/ptm/m/n/10 Or we can use the bit rank-ing func-tion-al-ity from the \T1/p
cr/m/n/10 rdkit.ML.InfoTheory.rdInfoTheory.
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[]

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[65 <./picture_5.png (PNG copy)>] [66]
Chapter 4.
[67 <./picture_9.png (PNG copy)>] [68 <./picture_8.png> <./picture_7.png (PNG c
opy)>] [69 <./picture_10.png> <./picture_12.png>] [70 <./picture_11.png>]
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Chapter 5.
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[]\T1/ptm/m/n/10 IPython note-book: [][]$http : / / nbviewer . ipython . org / 
gist / greglandrum / 8351725$[][] [][]$https : / / gist . github . com / gregla
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Chapter 6.
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[]|\T1/pcr/m/n/9 )CNC([]=[]O)CN)CSSC[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](
C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2ccc(O)cc2)C([]=[]O)N[C[
]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CO)C([]=[]O)N[C[]\T1/pcr/b/n/9 @H[]\T1/
pcr/m/n/9 ](C([]=[]O)NCC([]=[]O)NCC(N)[]=[]O)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr
/m/n/9 ](C)O)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2c[nH]cn2)NC([]=
[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2ccccc2)NC([]=[]O)CNC([]=[]O)[C|  

Overfull \hbox (388.84401pt too wide) in paragraph at lines 7098--7098
[]\T1/pcr/m/n/9 NC(N)[]=[]NCCC[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](NC([]=[]O)[
C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](N)CC([]=[]O)O)C([]=[]O)N[C[]\T1/pcr/b
/n/9 @H[]\T1/pcr/m/n/9 ][]1[]CCSSC[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C(
[]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2c[nH]cn2)C([]=[]O)N2CCC[C
[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]2[]C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T
1/pcr/m/n/9 ](Cc2ccccc2)C([]=[]O)O)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/
9 ](Cc2ccc(O)cc|  

Overfull \hbox (388.84401pt too wide) in paragraph at lines 7100--7100
[]\T1/pcr/m/n/9 CC1(C)SSC(C)(C)[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](C([]=
[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](Cc2c[nH]cn2)C([]=[]O)N2CCC[C[]\
T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]2[]C([]=[]O)N[C[]@[][]\T1/pcr/b/n/9 @H[]\T1/p
cr/m/n/9 ](Cc2ccccc2)C([]=[]O)O)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ]
(Cc2ccc(O)cc2)NC([]=[]O)[C[]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ][]1[]NC([]=[]O)[C[
]\T1/pcr/b/n/9 @H[]\T1/pcr/m/n/9 ](CCCN[]=[]C(N)N)NC([]=[]|  

Overfull \vbox (2.68167pt too high) detected at line 7110
[106]
Overfull \hbox (21.64442pt too wide) in paragraph at lines 7124--7124
[]\T1/pcr/m/n/9 Cn1c(Nc2c(Cl)ccc(CNC([]=[]O)C(C)(C)C)c2Cl)nc2cc(C([]=[]O)Nc3ccc
c(C(F)(F)F)n3)c(N3CCC(F)(F)C3)cc21|  

Overfull \hbox (21.64442pt too wide) in paragraph at lines 7161--7161
[]\T1/pcr/m/n/9 Cn1c(Nc2c(Cl)ccc(CNC([]=[]O)C(C)(C)C)c2Cl)nc2cc(C([]=[]O)Nc3ccc
c(C(F)(F)F)n3)c(N3CCC(F)(F)C3)cc21|  
[107]
Overfull \hbox (21.64442pt too wide) in paragraph at lines 7185--7185
[]\T1/pcr/m/n/9 Cn1c(Nc2c(Cl)ccc(CNC([]=[]O)C(C)(C)C)c2Cl)nc2cc(C([]=[]O)Nc3ccc
c(C(F)(F)F)n3)c(N3CCC(F)(F)C3)cc21|  
[108]
Overfull \vbox (10.4835pt too high) detected at line 7319
[109] [110] [111] [112] [113] [114] [115] [116] [117] [118]
Chapter 7.
[119] [120]
Chapter 8.
[121] [122] [123] [124] [125] [126] [127] [128] [129] [130] [131] [132]
[133] [134]
Chapter 9.
[135] [136]
Chapter 10.
(./RDKit.ind) [137] (./RDKit.aux)

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Output written on RDKit.pdf (145 pages, 1621510 bytes).
Transcript written on RDKit.log.
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  Latex found 114 multiply defined reference(s)
=== TeX engine is 'pdfTeX'
Latexmk: All targets (RDKit.pdf) are up-to-date
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/_build/latex'
pdflatex finished; the PDF files are in _build/latex.
make[2]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book'
make[1]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg'
   debian/rules override_dh_auto_test
make[1]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg'
cp -r rdkit obj-*/
find /<<BUILDDIR>>/rdkit-201809.1+dfsg -name rdchem.so
/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/rdkit/Chem/rdchem.so
#export RDBASE=/<<BUILDDIR>>/rdkit-201809.1+dfsg PYTHONPATH=/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/ LD_LIBRARY_PATH="/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf//lib:"
PYTHONPATH=/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/:/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf//rdkit/Chem/ LD_LIBRARY_PATH="/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf//lib:" dh_auto_test
	cd obj-arm-linux-gnueabihf && make -j4 test ARGS\+=-j4
make[2]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
Running tests...
/usr/bin/ctest --force-new-ctest-process -j4
Test project /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf
        Start   1: testDict
        Start   2: testRDValue
        Start   3: testDataStructs
        Start   4: testFPB
  1/139 Test   #2: testRDValue ........................   Passed    0.01 sec
        Start   5: testMultiFPB
  2/139 Test   #3: testDataStructs ....................   Passed    0.02 sec
        Start   6: pyBV
  3/139 Test   #4: testFPB ............................   Passed    0.02 sec
        Start   7: pyDiscreteValueVect
  4/139 Test   #5: testMultiFPB .......................   Passed    0.01 sec
        Start   8: pySparseIntVect
  5/139 Test   #7: pyDiscreteValueVect ................   Passed    0.23 sec
        Start   9: pyFPB
  6/139 Test   #8: pySparseIntVect ....................   Passed    0.23 sec
        Start  10: testTransforms
  7/139 Test  #10: testTransforms .....................   Passed    0.01 sec
        Start  11: testGrid
  8/139 Test  #11: testGrid ...........................   Passed    0.07 sec
        Start  12: testPyGeometry
  9/139 Test   #9: pyFPB ..............................   Passed    0.22 sec
        Start  13: testMatrices
 10/139 Test  #13: testMatrices .......................   Passed    0.01 sec
        Start  14: testAlignment
 11/139 Test  #14: testAlignment ......................   Passed    0.01 sec
        Start  15: pyAlignment
 12/139 Test  #12: testPyGeometry .....................   Passed    0.29 sec
        Start  16: testOptimizer
 13/139 Test  #16: testOptimizer ......................   Passed    0.01 sec
        Start  17: testUFFForceField
 14/139 Test  #15: pyAlignment ........................   Passed    0.21 sec
        Start  18: testMMFFForceField
 15/139 Test  #17: testUFFForceField ..................   Passed    0.19 sec
        Start  19: pyForceFieldConstraints
 16/139 Test   #6: pyBV ...............................   Passed    1.63 sec
        Start  20: testDistGeom
 17/139 Test  #20: testDistGeom .......................   Passed    0.01 sec
        Start  21: pyDistGeom
 18/139 Test  #21: pyDistGeom .........................   Passed    0.21 sec
        Start  22: graphmolTest1
 19/139 Test  #19: pyForceFieldConstraints ............   Passed    1.21 sec
        Start  23: graphmolcpTest
 20/139 Test  #23: graphmolcpTest .....................   Passed    0.05 sec
        Start  24: graphmolqueryTest
 21/139 Test  #24: graphmolqueryTest ..................   Passed    0.05 sec
        Start  25: graphmolMolOpsTest
 22/139 Test   #1: testDict ...........................   Passed    3.10 sec
        Start  26: graphmoltestCanon
 23/139 Test  #26: graphmoltestCanon ..................   Passed    0.01 sec
        Start  27: graphmoltestChirality
 24/139 Test  #27: graphmoltestChirality ..............   Passed    0.12 sec
        Start  28: graphmoltestPickler
 25/139 Test  #28: graphmoltestPickler ................Child aborted***Exception:   0.68 sec
[08:50:55] -------------------------------------
[08:50:55] Testing String Pickle Roundtrips.
[08:50:55] 	done
[08:50:55] -------------------------------------
[08:50:55] Testing reading existing pickle file (v2).
[08:50:55] 	done
[08:50:55] -------------------------------------
[08:50:55] Testing combining molecules using pickles.
Atoms:
	0 6 C chg: 0  deg: 2 exp: 2 imp: 2 hyb: 4 arom?: 0 chi: 0
	1 6 C chg: 0  deg: 2 exp: 2 imp: 2 hyb: 4 arom?: 0 chi: 0
	2 6 C chg: 0  deg: 2 exp: 2 imp: 2 hyb: 4 arom?: 0 chi: 0
	3 6 C chg: 0  deg: 2 exp: 2 imp: 2 hyb: 4 arom?: 0 chi: 0
	4 6 C chg: 0  deg: 2 exp: 2 imp: 2 hyb: 4 arom?: 0 chi: 0
	5 8 O chg: 0  deg: 2 exp: 2 imp: 0 hyb: 4 arom?: 0 chi: 0
	6 6 C chg: 0  deg: 2 exp: 2 imp: 2 hyb: 4 arom?: 0 chi: 0
Bonds:
	0 0->1 order: 1 conj?: 0 aromatic?: 0
	1 1->2 order: 1 conj?: 0 aromatic?: 0
	2 2->0 order: 1 conj?: 0 aromatic?: 0
	3 3->4 order: 1 conj?: 0 aromatic?: 0
	4 4->5 order: 1 conj?: 0 aromatic?: 0
	5 5->6 order: 1 conj?: 0 aromatic?: 0
	6 6->3 order: 1 conj?: 0 aromatic?: 0
[08:50:55] 	done
[08:50:55] -------------------------------------
[08:50:55] Testing Issue164: Roundtrip Pickle Failure.
[08:50:55] 	done
[08:50:55] -------------------------------------
[08:50:55] Testing Issue219: Pickle Failure with Conformations.
[08:50:55] 	done
[08:50:55] -------------------------------------
[08:50:55] Testing Issue220: Pickle problems with bond stereochemistry.
[08:50:55] 	done
[08:50:55] -------------------------------------
[08:50:55] Testing query serialization.
[08:50:55] C=[$(C=O)]
[08:50:55] S(=O)(=O)-[C&H2]-,:[F,Br,I,Cl] S(=O)(=O)-[C&H2]-,:[F,Br,I,Cl]
[08:50:55] 	done
[08:50:55] -------------------------------------
[08:50:55] Testing radical handling in pickles.
[08:50:55] 	done
[08:50:55] -----------------------
[08:50:55] Testing pickling of properties
[08:50:55] 	done
[08:50:55] -------------------------------------
[08:50:55] Testing sf.net issue 2788233.
[08:50:55] 	done
[08:50:55] -------------------------------------
[08:50:55] Testing sf.net issue 3202580.
  mass! 13.0034
[08:50:55] 	done
[08:50:55] -------------------------------------
[08:50:55] Testing sf.net issue 3316407.
[08:50:55] 	done
[08:50:55] -------------------------------------
[08:50:55] Testing sf.net issue 3496759.
smi match: *C *C
smi match: **=* **=*
smi match: [N-]=[N+]=NC=O [N-]=[N+]=NC=O
smi match: *OS(=O)OC *OS(=O)OC
smi match: *S(=O)(=O)OC *S(=O)(=O)OC
smi match: O=COC=O O=COC=O
smi match: OO OO
smi match: O=COc1c(F)c(F)c(F)c(F)c1F O=COc1c(F)c(F)c(F)c(F)c1F
smi match: O=COc1ccc(N(=O)=O)cc1 O=COc1ccc(N(=O)=O)cc1
smi match: nnnOC=O nnnOC=O
smi match: *=C=N *=C=N
smi match: O=S(=O)(O)C(F)(F)F O=S(=O)(O)C(F)(F)F
smi match: S=[PH](S)S S=[PH](S)S
smi match: NP(N)(N)=O NP(N)(N)=O
smi match: cN=[N+]=[N-] cN=[N+]=[N-]
smi match: *CC=O *CC=O
smi match: NNC=O NNC=O
smi match: * *
smi match: C=P C=P
smi match: CC(=N)Cl CC(=N)Cl
smi match: N=O N=O
smi match: ** **
smi match: N=C=N N=C=N
smi match: [C-]#[NH+] [C-]#[NH+]
smi match: O=CON(C=O)C=O O=CON(C=O)C=O
smi match: N#CCO N#CCO
smi match: N#CC=O N#CC=O
smi match: N#C[SH](=O)=O N#C[SH](=O)=O
smi match: CCOP(=O)(C#N)OCC CCOP(=O)(C#N)OCC
smi match: N#CN=N N#CN=N
smi match: N=NCC=O N=NCC=O
smi match: CCCCCCC CCCCCCC
smi match: OCCOCCO OCCOCCO
smi match: SS SS
smi match: [SH] [SH]
smi match: *1CC1 *1CC1
smi match: Occc(O)cO Occc(O)cO
smi match: Occ(O)cO Occ(O)cO
smi match: N=NC(N)=S N=NC(N)=S
smi match: N#CS N#CS
smi match: cC[NH3+] cC[NH3+]
smi match: C*C=S C*C=S
smi match: N#CCN N#CCN
smi match: O=C1CCO1 O=C1CCO1
smi match: O=[PH](O)O[PH](=O)O O=[PH](O)O[PH](=O)O
smi match: O=C1CCN1 O=C1CCN1
smi match: O=C1C~CC(=O)C~C1 O=C1C~CC(=O)C~C1
smi match: C=CC=CC=CC=C C=CC=CC=CC=C
smi match: C1CCC(OC2CCC3CCCCC3C2)OC1 C1CCC(OC2CCC3CCCCC3C2)OC1
smi match: O=C1NCC2CCCCC12 O=C1NCC2CCCCC12
smi match: O=C1CCCC(=O)N1 O=C1CCCC(=O)N1
smi match: C1CCC(C2CCCO2)OC1 C1CCC(C2CCCO2)OC1
smi match: Oc1cc(O)c2c(c1)OC(c1ccc(O)c(O)c1)C(O)C2 Oc1cc(O)c2c(c1)OC(c1ccc(O)c(O)c1)C(O)C2
smi match: C1CC2CCC(O1)O2 C1CC2CCC(O1)O2
smi match: cN(=O)~O cN(=O)~O
smi match: *CN1C(=O)CCC1=O *CN1C(=O)CCC1=O
smi match: N~NC=O N~NC=O
smi match: *=N~C *=N~C
smi match: CO*(=O)=O CO*(=O)=O
smi match: * *
smi match: * *
smi match: *C=C *C=C
smi match: N#CS N#CS
smi match: *C=S *C=S
smi match: *N *N
smi match: *C(=C)C=O *C(=C)C=O
smi match: *C#C *C#C
smi match: N#CCO N#CCO
smi match: O=N(=O)CCO O=N(=O)CCO
smi match: N=CS N=CS
smi match: O=CNC(O)C=O O=CNC(O)C=O
smi match: C=C(C=O)C=O C=C(C=O)C=O
smi match: N=CC=O N=CC=O
smi match: *C(C=O)C=O *C(C=O)C=O
smi match: *C(C=O)=C(*)C=O *C(C=O)=C(*)C=O
smi match: O=CC=CC=O O=CC=CC=O
smi match: O=CN(O)C=O O=CN(O)C=O
smi match: O=CN(S)C=O O=CN(S)C=O
smi match: O=CNC=O O=CNC=O
smi match: O=CNN=O O=CNN=O
smi match: O=CNNC=O O=CNNC=O
smi match: O=CNOC=O O=CNOC=O
smi match: O=CS O=CS
smi match: O=CSC=S O=CSC=S
smi match: S=CS S=CS
smi match: C=O C=O
smi match: *C=N *C=N
smi match: CCCCCCC CCCCCCC
smi match: CN=O CN=O
smi match: CS(=O)(=O)O CS(=O)(=O)O
smi match: O=C1CCO1 O=C1CCO1
smi match: C=C(S)[SH]=O C=C(S)[SH]=O
smi match: C=CCO C=CCO
smi match: C=CC=N C=CC=N
smi match: C=CC=O C=CC=O
smi match: C=CC(=O)C=C C=CC(=O)C=C
smi match: C=CC=S C=CC=S
smi match: C=CC(=S)S C=CC(=S)S
smi match: *C=C(*)C=C *C=C(*)C=C
smi match: C=CC=N C=CC=N
smi match: *N(*)C=C *N(*)C=C
smi match: C=CN(=O)=O C=CN(=O)=O
smi match: C=CN(=O)O C=CN(=O)O
smi match: C=CO C=CO
smi match: C=COC=O C=COC=O
smi match: C=CS C=CS
smi match: C=C[SH](=O)=O C=C[SH](=O)=O
smi match: C=NCO C=NCO
smi match: C=NC=O C=NC=O
smi match: C=NN C=NN
smi match: C=NN=C C=NN=C
smi match: C=NO C=NO
smi match: C=NOC=O C=NOC=O
smi match: C=N=O C=N=O
smi match: N#CS N#CS
smi match: *CN=O *CN=O
smi match: NCN NCN
smi match: O=NCC=NO O=NCC=NO
smi match: NC(S)=N[SH](=O)=O NC(S)=N[SH](=O)=O
smi match: N=C(N)S N=C(N)S
smi match: NC(=O)Oc1ccccc1 NC(=O)Oc1ccccc1
smi match: NC=S NC=S
smi match: NC(N)=S NC(N)=S
smi match: C=CN C=CN
smi match: NOC=O NOC=O
smi match: C1CN1 C1CN1
smi match: O=C1NNNN1 O=C1NNNN1
smi match: N=C(N)C(=N)N N=C(N)C(=N)N
smi match: N=C(N)O N=C(N)O
smi match: N=C(N)C(=N)S N=C(N)C(=N)S
smi match: *C=N *C=N
smi match: N=CC=O N=CC=O
smi match: N=CS N=CS
smi match: N=C=N N=C=N
smi match: N=C=O N=C=O
smi match: N=C=S N=C=S
smi match: NOC(=O)O NOC(=O)O
smi match: *C(O)=S *C(O)=S
smi match: C=CO C=CO
smi match: ON=CC=NO ON=CC=NO
smi match: *C[SH](=O)=O *C[SH](=O)=O
smi match: O=[SH](=O)O O=[SH](=O)O
smi match: N#CS N#CS
smi match: C=C(S)S C=C(S)S
smi match: N=C(N)S N=C(N)S
smi match: N=C(S)S N=C(S)S
smi match: NC(=S)S NC(=S)S
smi match: O=CNS O=CNS
smi match: S S
smi match: [SiH4] [SiH4]
smi match: NS NS
smi match: NCN NCN
smi match: cC(c)(O)O cC(c)(O)O
smi match: *C(c)O *C(c)O
smi match: C=CS(c)(=O)=O C=CS(c)(=O)=O
smi match: cS(=O)(=O)O cS(=O)(=O)O
smi match: *c1ccccn1=O *c1ccccn1=O
smi match: *c1ccccn1 *c1ccccn1
smi match: *c1nccccn1 *c1nccccn1
smi match: C1COCOC1 C1COCOC1
smi match: C=S C=S
smi match: c=S c=S
smi match: S=CS S=CS
smi match: C=CN(=O)=O C=CN(=O)=O
smi match: C=CN(=O)O C=CN(=O)O
smi match: N=CC=O N=CC=O
smi match: C=CS C=CS
smi match: SC(S)(S)S SC(S)(S)S
smi match: OS(O)(O)O OS(O)(O)O
smi match: O=N(=O)C[SH](=O)=O O=N(=O)C[SH](=O)=O
smi match: O=N(O)C[SH](=O)=O O=N(O)C[SH](=O)=O
smi match: N#CS N#CS
smi match: C=NO C=NO
smi match: C=N[SH]=N C=N[SH]=N
smi match: O=C(S)S O=C(S)S
smi match: N=C(S)S N=C(S)S
smi match: N=C(=N)S N=C(=N)S
smi match: O=N=O O=N=O
smi match: O=NO O=NO
smi match: ONO ONO
smi match: C1SCS1 C1SCS1
smi match: N=C=S N=C=S
smi match: N=C=N N=C=N
smi match: C1N=N1 C1N=N1
smi match: *CS *CS
smi match: SC(S)=C(S)S SC(S)=C(S)S
smi match: N=CC=NO N=CC=NO
smi match: N#CCC#N N#CCC#N
smi match: CON=O CON=O
smi match: C=CN C=CN
smi match: C=N[SH](=O)=O C=N[SH](=O)=O
smi match: NN=O NN=O
smi match: NC(=O)S NC(=O)S
smi match: N#CS N#CS
smi match: NC(=O)C(N)=O NC(=O)C(N)=O
smi match: c=N c=N
smi match: C1COCO1 C1COCO1
smi match: C=NN[SH](=O)=O C=NN[SH](=O)=O
smi match: O=CC=O O=CC=O
smi match: O=CNOC=O O=CNOC=O
smi match: O=C1C=CC(=O)C=C1 O=C1C=CC(=O)C=C1
smi match: ONO ONO
smi match: ON(~O)~O ON(~O)~O
smi match: OC1COC(O)C1 OC1COC(O)C1
smi match: OC1CCOC1O OC1CCOC1O
smi match: OC1CCOC(O)C1 OC1CCOC(O)C1
smi match: N=[N+]=N N=[N+]=N
smi match: N#CN N#CN
smi match: C=NN=C C=NN=C
smi match: *CCN(C)C *CCN(C)C
smi match: CNN CNN
smi match: *CC *CC
smi match: OCS OCS
smi match: C1NO1 C1NO1
smi match: COS(C)(=O)=O COS(C)(=O)=O
smi match: C1CO1 C1CO1
smi match: *c1-c-c-ccN1 *c1-c-c-ccN1
smi match: *C(*)=C *C(*)=C
smi match: N#[NH+] N#[NH+]
smi match: C#NO C#NO
smi match: OOO OOO
smi match: OO OO
smi match: O~Cl(~O)~O O~Cl(~O)~O
smi match: O~Cl(~O)(~O)~O O~Cl(~O)(~O)~O
smi match: [OH]~C(~O)~O [OH]~C(~O)~O
smi match: *N *N
smi match: *P *P
smi match: *S *S
smi match: *C(*)(*)C=C *C(*)(*)C=C
smi match: *C(*)(*)C=C *C(*)(*)C=C
smi match: *C(*)C=C *C(*)C=C
smi match: *CC=C *CC=C
smi match: CN=C=O CN=C=O
smi match: CN=C=S CN=C=S
smi match: *C=O *C=O
smi match: N=N N=N
smi match: SS SS
smi match: O=C1CCNC(=O)O1 O=C1CCNC(=O)O1
smi match: CSC(C)=N CSC(C)=N
smi match: COC(C)=N COC(C)=N
smi match: C=C=C C=C=C
smi match: *C(=O)OC=O *C(=O)OC=O
smi match: C=CC#N C=CC#N
smi match: C=CC=O C=CC=O
smi match: CC=CC(C)=O CC=CC(C)=O
smi match: CC=CC(=O)OCC CC=CC(=O)OCC
smi match: C#CC#N C#CC#N
smi match: C#CC=O C#CC=O
smi match: C#CC(=O)OCC C#CC(=O)OCC
smi match: C#CC=O C#CC=O
smi match: *C(=O)C#C *C(=O)C#C
smi match: C=CC=O C=CC=O
smi match: *C(*)(*)O *C(*)(*)O
smi match: COS(=O)(=O)O COS(=O)(=O)O
smi match: CS(=O)(=O)[O-] CS(=O)(=O)[O-]
smi match: NS(=O)(=O)[O-] NS(=O)(=O)[O-]
smi match: *C(*)(*)C=O *C(*)(*)C=O
smi match: *C(*)(*)C=O *C(*)(*)C=O
smi match: *C(*)C=O *C(*)C=O
smi match: *CC=O *CC=O
smi match: *C(*)(*)[SH](=O)=O *C(*)(*)[SH](=O)=O
smi match: *C(*)(*)[SH](=O)=O *C(*)(*)[SH](=O)=O
smi match: *C(*)[SH](=O)=O *C(*)[SH](=O)=O
smi match: *C[SH](=O)=O *C[SH](=O)=O
smi match: * *
smi match: *1CC1 *1CC1
smi match: O=COC=O O=COC=O
smi match: N=C=O N=C=O
smi match: N=C=S N=C=S
smi match: O~O O~O
smi match: N~[SiH4] N~[SiH4]
smi match: *P *P
smi match: C=N=N C=N=N
smi match: *N#[NH+] *N#[NH+]
smi match: *S* *S*
smi match: ** **
smi match: *CC* *CC*
smi match: *O[SiH3] *O[SiH3]
smi match: *OS(*)~O *OS(*)~O
smi match: N~N~O N~N~O
smi match: *N(~O)(~O)~O *N(~O)(~O)~O
smi match: *[N+](=C)[O-] *[N+](=C)[O-]
smi match: * *
smi match: *C(*)NCN(*)* *C(*)NCN(*)*
smi match: *OCC#N *OCC#N
smi match: **C=C **C=C
smi match: C=C[O-] C=C[O-]
smi match: C=CO C=CO
smi match: * *
smi match: O=CON1C(=O)CCC1=O O=CON1C(=O)CCC1=O
smi match: O=COn1ccnc1 O=COn1ccnc1
smi match: O=COc1c(F)c(F)c(F)c(F)c1F O=COc1c(F)c(F)c(F)c(F)c1F
smi match: CC(C)(C)S CC(C)(C)S
smi match: [CH2][CH]~[CH]~[CH]~[CH]~[CH]~[CH]~[CH]~[CH]~[CH]~[CH]~C [CH2][CH]~[CH]~[CH]~[CH]~[CH]~[CH]~[CH]~[CH]~[CH]~[CH]~C
smi match: [CH]=O [CH]=O
smi match: C~[CH2]~[CH2]~[CH2]~[CH2]~[CH2]~C C~[CH2]~[CH2]~[CH2]~[CH2]~[CH2]~C
smi match: SS SS
smi match: [SH] [SH]
smi match: *C* *C*
smi match: * *
smi match: C[nH3+] C[nH3+]
smi match: cC(=N)N cC(=N)N
smi match: O=CNO O=CNO
smi match: NN NN
smi match: * *
smi match: *O[PH](=O)O* *O[PH](=O)O*
smi match: * *
smi match: * *
smi match: * *
smi match: *N=C(*)* *N=C(*)*
smi match: *C(*)(*)C=O *C(*)(*)C=O
smi match: CSC=O CSC=O
smi match: * *
smi match: O=CCl O=CCl
smi match: *** ***
smi match: *C=O *C=O
smi match: CO CO
smi match: CO CO
smi match: CO CO
smi match: CO CO
smi match: CC=O CC=O
smi match: *=* *=*
smi match: *C *C
smi match: C#C C#C
smi match: *[CH]C=C *[CH]C=C
smi match: cCC(=O)O cCC(=O)O
smi match: *C(*)(*)C(=O)O *C(*)(*)C(=O)O
smi match: CC(=O)C(=O)O CC(=O)C(=O)O
smi match: C=CC(=O)O C=CC(=O)O
smi match: N#CC(=O)O N#CC(=O)O
smi match: O=C(O)CN(~O)~O O=C(O)CN(~O)~O
smi match: *N(*)C*=O *N(*)C*=O
smi match: O=*CO O=*CO
smi match: *=C*=O *=C*=O
smi match: *=CC#N *=CC#N
smi match: *CO *CO
smi match: ** **
smi match: *CO *CO
smi match: *C(*)=O *C(*)=O
smi match: * *
smi match: *CC(=O)O *CC(=O)O
smi match: CC(=O)OC(C)=O CC(=O)OC(C)=O
smi match: *c *c
smi match: cN(C)C cN(C)C
smi match: c c
smi match: *c *c
smi match: *c *c
smi match: **:*cF **:*cF
smi match: cB(O)O cB(O)O
smi match: N~N~N N~N~N
smi match: *N=N* *N=N*
smi match: *CCO *CCO
smi match: *CCO *CCO
smi match: *=CCC(=O)O *=CCC(=O)O
smi match: O=C(O)CCO O=C(O)CCO
smi match: *CCC(=O)O *CCC(=O)O
smi match: CC(=O)CC(=O)O CC(=O)CC(=O)O
smi match: *OC(=O)CC(C)=O *OC(=O)CC(C)=O
smi match: *OC(*)=O *OC(*)=O
smi match: *C(=O)O *C(=O)O
smi match: O=CO O=CO
smi match: *OC(=O)O* *OC(=O)O*
smi match: * *
smi match: *OC(=O)Cl *OC(=O)Cl
smi match: *C#N *C#N
smi match: NCC(=O)NCC=O NCC(=O)NCC=O
smi match: SS SS
smi match: * *
smi match: *=* *=*
smi match: *=* *=*
smi match: *=* *=*
smi match: *=* *=*
smi match: C1CO1 C1CO1
smi match: *OC(*)=O *OC(*)=O
smi match: * *
smi match: *O*O *O*O
smi match: COC(C)(C)O COC(C)(C)O
smi match: *O *O
smi match: ** **
smi match: C=NN C=NN
smi match: C=NC=O C=NC=O
smi match: * *
smi match: C#NC C#NC
smi match: CN=C=O CN=C=O
smi match: CN=C=S CN=C=S
smi match: *OC(*)(*)O* *OC(*)(*)O*
smi match: *C(*)=O *C(*)=O
smi match: C~C~C~C~C~C~C C~C~C~C~C~C~C
smi match: *~*=O *~*=O
smi match: *~*=O *~*=O
smi match: O=C(O)CC(=O)O O=C(O)CC(=O)O
smi match: * *
smi match: *C#N *C#N
smi match: *N(=O)~O *N(=O)~O
smi match: N N
smi match: O=C(O)C(=O)O O=C(O)C(=O)O
smi match: C=NO C=NO
smi match: O~O O~O
smi match: cO cO
smi match: O=P(~[OH])~O O=P(~[OH])~O
smi match: CO~P(=O)~O CO~P(=O)~O
smi match: O=P(~[OH])(~O)~O O=P(~[OH])(~O)~O
smi match: CO~P(=O)(~O)~O CO~P(=O)(~O)~O
smi match: O=P(~O)~O O=P(~O)~O
smi match: O=P(~O)(~O)~O O=P(~O)(~O)~O
smi match: CN CN
smi match: O~*1~**~*(~O)~**~1 O~*1~**~*(~O)~**~1
smi match: * *
smi match: *1~*~*~C2~C(~*~1)~*~*~C1~C3~*~*~*~C~3~*~*~C~2~1 *1~*~*~C2~C(~*~1)~*~*~C1~C3~*~*~*~C~3~*~*~C~2~1
smi match: CS(C)~O CS(C)~O
smi match: CS(C)(~O)~O CS(C)(~O)~O
smi match: CS(N)(~O)~O CS(N)(~O)~O
smi match: CS(O)(~O)~O CS(O)(~O)~O
smi match: COS(C)(~O)~O COS(C)(~O)~O
smi match: *S(C)(~O)~O *S(C)(~O)~O
smi match: CN(C)C CN(C)C
smi match: *c1nnc(=N)s1 *c1nnc(=N)s1
smi match: *C(*)=S *C(*)=S
smi match: *OC(*)=S *OC(*)=S
smi match: * *
smi match: CS CS
smi match: cS cS
smi match: NC(N)=S NC(N)=S
smi match: * *
smi match: ***** *****
smi match: NC(N)=O NC(N)=O
[08:50:55] 	done
[08:50:55] -------------------------------------
[08:50:55] Testing sf.net issue 280.
[08:50:55] 	done
[08:50:55] -------------------------------------
[08:50:55] Testing sf.net issue 285.
[08:50:55] 	done
[08:50:55] -----------------------
[08:50:55] Testing residue information handling on atoms
[08:50:55] 	done
[08:50:55] -----------------------
[08:50:55] Testing Github issue 149: cannot pickle unsanitized molecules
[08:50:55] 	done
[08:50:55] -----------------------
[08:50:55] Testing Github issue 713: Molecule serialization doesn't read/write atomic numbers above 128
[08:50:55] 	done
[08:50:55] -----------------------
[08:50:55] Testing Github 1563: Add a canned Atom query for heavy atom degree
[08:50:55] 	done
[08:50:55] -----------------------
[08:50:55] Testing Github 1710: bonds that are STEREOCIS or STEREOTRANS cannot be depickled
[08:50:55] 	done
[08:50:55] -----------------------
[08:50:55] Testing Github 1999: pickling atom map numbers >127 gives negative values
terminate called after throwing an instance of 'RDKit::MolPicklerException'
  what():  std::exception

        Start  29: graphmoltestPicklerGlobalSetting
 26/139 Test  #29: graphmoltestPicklerGlobalSetting ...   Passed    0.05 sec
        Start  30: graphmolIterTest
 27/139 Test  #30: graphmolIterTest ...................   Passed    0.05 sec
        Start  31: hanoiTest
 28/139 Test  #25: graphmolMolOpsTest .................   Passed    4.55 sec
        Start  32: graphmolMemTest1
 29/139 Test  #32: graphmolMemTest1 ...................   Passed    0.01 sec
        Start  33: resMolSupplierTest
 30/139 Test  #33: resMolSupplierTest .................   Passed    1.70 sec
        Start  34: molBundleTest
 31/139 Test  #34: molBundleTest ......................   Passed    0.05 sec
        Start  35: test-valgrind
 32/139 Test  #35: test-valgrind ......................   Passed    0.05 sec
        Start  36: graphmolTestsCatch
 33/139 Test  #36: graphmolTestsCatch .................   Passed    0.06 sec
        Start  37: testDepictor
 34/139 Test  #37: testDepictor .......................   Passed    0.81 sec
        Start  38: pyDepictor
 35/139 Test  #38: pyDepictor .........................   Passed    0.83 sec
        Start  39: smiTest1
 36/139 Test  #39: smiTest1 ...........................   Passed    0.07 sec
        Start  40: smiTest2
 37/139 Test  #40: smiTest2 ...........................   Passed    0.01 sec
        Start  41: cxsmilesTest
 38/139 Test  #41: cxsmilesTest .......................   Passed    0.06 sec
        Start  42: smaTest1
 39/139 Test  #42: smaTest1 ...........................   Passed    0.54 sec
        Start  43: smiTestCatch
 40/139 Test  #43: smiTestCatch .......................   Passed    0.06 sec
        Start  44: fileParsersTest1
 41/139 Test  #44: fileParsersTest1 ...................   Passed    0.07 sec
        Start  45: testMolSupplier
 42/139 Test  #45: testMolSupplier ....................   Passed    0.34 sec
        Start  46: testMolWriter
 43/139 Test  #46: testMolWriter ......................   Passed    0.72 sec
        Start  47: testTplParser
 44/139 Test  #47: testTplParser ......................   Passed    0.09 sec
        Start  48: testMol2ToMol
 45/139 Test  #48: testMol2ToMol ......................   Passed    0.09 sec
        Start  49: testSequence
 46/139 Test  #49: testSequence .......................   Passed    0.17 sec
        Start  50: testExtendedStereoParsing
 47/139 Test  #50: testExtendedStereoParsing ..........   Passed    0.06 sec
        Start  51: fileParsersCatchTest
 48/139 Test  #51: fileParsersCatchTest ...............   Passed    0.06 sec
        Start  52: testSubstructMatch
 49/139 Test  #52: testSubstructMatch .................   Passed    1.08 sec
        Start  53: testReaction
 50/139 Test  #53: testReaction .......................   Passed    0.51 sec
        Start  54: testReactionFingerprints
 51/139 Test  #54: testReactionFingerprints ...........   Passed    0.08 sec
        Start  55: rxnTestCatch
 52/139 Test  #55: rxnTestCatch .......................   Passed    0.07 sec
        Start  56: pyChemReactions
 53/139 Test  #56: pyChemReactions ....................   Passed    0.53 sec
        Start  57: pyChemReactionEnumerations
 54/139 Test  #57: pyChemReactionEnumerations .........   Passed   10.05 sec
        Start  58: pyChemReactionSanitize
 55/139 Test  #58: pyChemReactionSanitize .............   Passed    0.38 sec
        Start  59: testChemTransforms
 56/139 Test  #59: testChemTransforms .................   Passed    0.18 sec
        Start  60: testSubgraphs1
 57/139 Test  #60: testSubgraphs1 .....................   Passed    0.59 sec
        Start  61: testSubgraphs2
 58/139 Test  #61: testSubgraphs2 .....................   Passed    0.05 sec
        Start  62: filterCatalogTest
 59/139 Test  #62: filterCatalogTest ..................   Passed    0.22 sec
        Start  63: pyFilterCatalog
 60/139 Test  #63: pyFilterCatalog ....................   Passed    4.94 sec
        Start  64: testFragCatalog
 61/139 Test  #64: testFragCatalog ....................   Passed    1.78 sec
        Start  65: pyFragCatalog
 62/139 Test  #65: pyFragCatalog ......................   Passed    0.42 sec
        Start  66: testDescriptors
 63/139 Test  #18: testMMFFForceField .................   Passed   37.03 sec
        Start  67: testAUTOCORR2D
 64/139 Test  #67: testAUTOCORR2D .....................   Passed    1.30 sec
        Start  68: pyMolDescriptors
 65/139 Test  #68: pyMolDescriptors ...................   Passed    0.63 sec
        Start  69: pyMolDescriptors3D
 66/139 Test  #69: pyMolDescriptors3D .................   Passed    0.33 sec
        Start  70: testFingerprints
 67/139 Test  #31: hanoiTest ..........................   Passed   47.17 sec
        Start  71: testFingerprintGenerators
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        Start  72: pyTestGenerator
 69/139 Test  #66: testDescriptors ....................   Passed   19.73 sec
        Start  73: testPartialCharges
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        Start  74: pyPartialCharges
 71/139 Test  #72: pyTestGenerator ....................   Passed    0.34 sec
        Start  75: testMolTransforms
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        Start  76: pyMolTransforms
 73/139 Test  #76: pyMolTransforms ....................   Passed    0.36 sec
        Start  77: testMMFFForceFieldHelpers
 74/139 Test  #74: pyPartialCharges ...................   Passed    0.60 sec
        Start  78: testUFFForceFieldHelpers
 75/139 Test  #70: testFingerprints ...................   Passed   33.70 sec
        Start  79: testCrystalForceField
 76/139 Test  #79: testCrystalForceField ..............   Passed    0.23 sec
        Start  80: pyForceFieldHelpers
 77/139 Test  #80: pyForceFieldHelpers ................   Passed    1.04 sec
        Start  81: testDistGeomHelpers
 78/139 Test  #22: graphmolTest1 ......................   Passed   85.79 sec
        Start  82: pyDistGeomHelpers
 79/139 Test  #77: testMMFFForceFieldHelpers ..........   Passed   47.33 sec
        Start  83: testMolAlign
 80/139 Test  #78: testUFFForceFieldHelpers ...........   Passed   60.99 sec
        Start  84: pyMolAlign
 81/139 Test  #82: pyDistGeomHelpers ..................   Passed   63.96 sec
        Start  85: testFeatures
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        Start  86: pyChemicalFeatures
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        Start  87: testShapeHelpers
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        Start  88: pyShapeHelpers
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        Start  89: testMolCatalog
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        Start  90: pyMolCatalog
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        Start  91: moldraw2DTest1
 88/139 Test  #91: moldraw2DTest1 .....................   Passed    7.07 sec
        Start  92: moldraw2DRxnTest1
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        Start  93: pyMolDraw2D
 90/139 Test  #93: pyMolDraw2D ........................   Passed    0.61 sec
        Start  94: testFMCS
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        Start  95: pyFMCS
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        Start  96: FMCStest
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        Start  97: testMolHash
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        Start  98: pyMolHash
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        Start  99: testMMPA
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        Start 100: pyMMPA
 97/139 Test #100: pyMMPA .............................   Passed    2.99 sec
        Start 101: testStructChecker
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        Start 102: pyStructChecker
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        Start 103: testReducedGraphs
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        Start 104: pyReducedGraphs
101/139 Test #104: pyReducedGraphs ....................   Passed    0.36 sec
        Start 105: trajectoryTest
102/139 Test #105: trajectoryTest .....................   Passed    1.12 sec
        Start 106: substructLibraryTest
103/139 Test #106: substructLibraryTest ...............   Passed    1.50 sec
        Start 107: pySubstructLibrary
104/139 Test #107: pySubstructLibrary .................   Passed    8.06 sec
        Start 108: testRGroupDecomp
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        Start 109: pyRGroupDecomposition
106/139 Test #109: pyRGroupDecomposition ..............   Passed    1.05 sec
        Start 110: testSLNParse
107/139 Test #110: testSLNParse .......................   Passed    0.32 sec
        Start 111: pySLNParse
108/139 Test #111: pySLNParse .........................   Passed    0.65 sec
        Start 112: pyGraphMolWrap
109/139 Test #112: pyGraphMolWrap .....................   Passed   22.96 sec
        Start 113: pyTestConformerWrap
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        Start 114: pyTestTrajectory
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        Start 115: pyTestThreads
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        Start 116: molStandardizeTest
113/139 Test #116: molStandardizeTest .................   Passed    0.83 sec
        Start 117: molNormalizeTest
114/139 Test #117: molNormalizeTest ...................   Passed    0.13 sec
        Start 118: molValidateTest
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        Start 119: molChargeTest
116/139 Test #119: molChargeTest ......................   Passed    0.60 sec
        Start 120: molTautomerTest
117/139 Test #120: molTautomerTest ....................   Passed    2.78 sec
        Start 121: molStandardizeSmallTest
118/139 Test #121: molStandardizeSmallTest ............   Passed    0.22 sec
        Start 122: molFragmentTest
119/139 Test #122: molFragmentTest ....................   Passed    0.38 sec
        Start 123: pyMolStandardize
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        Start 124: testQuery
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        Start 125: testMatCalc
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        Start 126: pyMatCalc
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        Start 127: testSimDivPickers
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        Start 128: pySimDivPickers
125/139 Test #128: pySimDivPickers ....................   Passed    0.80 sec
        Start 129: pyRanker
126/139 Test #129: pyRanker ...........................   Passed    0.29 sec
        Start 130: testChemicalFeatures
127/139 Test #130: testChemicalFeatures ...............   Passed    0.01 sec
        Start 131: pyFeatures
128/139 Test #131: pyFeatures .........................   Passed    0.32 sec
        Start 132: pythonTestDbCLI
129/139 Test  #81: testDistGeomHelpers ................   Passed  152.52 sec
        Start 133: pythonTestDirML
130/139 Test  #84: pyMolAlign .........................   Passed  127.52 sec
        Start 134: pythonTestDirDataStructs
131/139 Test #134: pythonTestDirDataStructs ...........   Passed    1.89 sec
        Start 135: pythonTestDirDbase
132/139 Test #135: pythonTestDirDbase .................   Passed    2.95 sec
        Start 136: pythonTestDirSimDivFilters
133/139 Test #136: pythonTestDirSimDivFilters .........   Passed    0.47 sec
        Start 137: pythonTestDirVLib
134/139 Test #137: pythonTestDirVLib ..................   Passed    0.78 sec
        Start 138: pythonTestDirChem
135/139 Test #133: pythonTestDirML ....................   Passed   21.08 sec
        Start 139: pythonTestSping
136/139 Test #139: pythonTestSping ....................   Passed    0.94 sec
137/139 Test #132: pythonTestDbCLI ....................   Passed   37.51 sec
138/139 Test #138: pythonTestDirChem ..................***Failed  201.97 sec
ss....
----------------------------------------------------------------------
Ran 6 tests in 0.173s

OK (skipped=2)
......
----------------------------------------------------------------------
Ran 6 tests in 0.186s

OK
....[08:55:02] 

****
Pre-condition Violation
valence not defined for atoms not associated with molecules
Violation occurred on line 266 in file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Atom.cpp
Failed Expression: dp_mol
****

.
----------------------------------------------------------------------
Ran 5 tests in 0.065s

OK
....
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Ran 4 tests in 0.059s

OK
..
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Ran 2 tests in 0.057s

OK
......................
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Ran 22 tests in 0.100s

OK
.....s.................ss
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Ran 25 tests in 0.267s

OK (skipped=3)
..s
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Ran 3 tests in 0.647s

OK (skipped=1)
...................................
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Ran 35 tests in 1.713s

OK
....
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Ran 4 tests in 0.074s

OK
.
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Ran 1 test in 0.060s

OK
.......
----------------------------------------------------------------------
Ran 7 tests in 0.135s

OK
...
----------------------------------------------------------------------
Ran 3 tests in 0.154s

OK
.ss.ss.......
----------------------------------------------------------------------
Ran 13 tests in 2.581s

OK (skipped=4)
........F...[08:56:03] WARNING: More than one matching pattern found - picking one
[08:56:03] WARNING: More than one matching pattern found - picking one
.[08:56:03] WARNING: More than one matching pattern found - picking one
..
======================================================================
FAIL: testEnumerateStereoisomersRandomSamplingShouldBeDeterministicAndPortable (__main__.TestCase)
----------------------------------------------------------------------
Traceback (most recent call last):
  File "UnitTestMol3D.py", line 218, in testEnumerateStereoisomersRandomSamplingShouldBeDeterministicAndPortable
    self.assertEqual(smiles, expected)
AssertionError: Items in the first set but not the second:
'C/C(F)=C/[C@@H](Cl)/C=C(\\Br)[C@@H](N)I'
'C/C(F)=C\\[C@H](Cl)/C=C(\\Br)[C@@H](N)I'
Items in the second set but not the first:
'C/C(F)=C/[C@@H](Cl)/C=C(/Br)[C@@H](N)I'
'C/C(F)=C/[C@H](Cl)/C=C(\\Br)[C@H](N)I'

----------------------------------------------------------------------
Ran 15 tests in 51.723s

FAILED (failures=1)
........
----------------------------------------------------------------------
Ran 8 tests in 0.315s

OK
....[08:56:18] WARNING: not removing hydrogen atom without neighbors
[08:56:18] WARNING: not removing hydrogen atom without neighbors
[08:56:18] WARNING: not removing hydrogen atom without neighbors
.......
----------------------------------------------------------------------
Ran 11 tests in 14.045s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 2.734s

OK
......
----------------------------------------------------------------------
Ran 6 tests in 0.793s

OK
...............s/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/rdkit/Chem/PandasTools.py:394: FutureWarning: Conversion of the second argument of issubdtype from `float` to `np.floating` is deprecated. In future, it will be treated as `np.float64 == np.dtype(float).type`.
  if (np.issubdtype(df.dtypes[dt], float) or np.issubdtype(df.dtypes[dt], int))
/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/rdkit/Chem/PandasTools.py:394: FutureWarning: Conversion of the second argument of issubdtype from `int` to `np.signedinteger` is deprecated. In future, it will be treated as `np.int32 == np.dtype(int).type`.
  if (np.issubdtype(df.dtypes[dt], float) or np.issubdtype(df.dtypes[dt], int))
./<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/rdkit/Chem/PandasTools.py:414: FutureWarning: Conversion of the second argument of issubdtype from `float` to `np.floating` is deprecated. In future, it will be treated as `np.float64 == np.dtype(float).type`.
  if np.issubdtype(type(cell_value), float):
.......
----------------------------------------------------------------------
Ran 24 tests in 7.110s

OK (skipped=1)
..
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Ran 2 tests in 0.000s

OK
UnitTestDocTestsChem.py:5: DeprecationWarning: The rdkit.Chem.MCS module is deprecated; please use rdkit.Chem.rdFMCS instead.
  from rdkit.Chem import MCS, FragmentMatcher, MACCSkeys, Descriptors, TemplateAlign
F./<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/rdkit/Chem/MCS.py:1: DeprecationWarning: The rdkit.Chem.MCS module is deprecated; please use rdkit.Chem.rdFMCS instead.
  # This work was funded by Roche and generously donated to the free
............[08:56:58] WARNING: More than one matching pattern found - picking one
[08:56:58] WARNING: More than one matching pattern found - picking one
...........
======================================================================
FAIL: EnumerateStereoisomers (rdkit.Chem.EnumerateStereoisomers)
Doctest: rdkit.Chem.EnumerateStereoisomers.EnumerateStereoisomers
----------------------------------------------------------------------
Traceback (most recent call last):
  File "/usr/lib/python2.7/doctest.py", line 2226, in runTest
    raise self.failureException(self.format_failure(new.getvalue()))
AssertionError: Failed doctest test for rdkit.Chem.EnumerateStereoisomers.EnumerateStereoisomers
  File "/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/rdkit/Chem/EnumerateStereoisomers.py", line 98, in EnumerateStereoisomers

----------------------------------------------------------------------
File "/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/rdkit/Chem/EnumerateStereoisomers.py", line 210, in rdkit.Chem.EnumerateStereoisomers.EnumerateStereoisomers
Failed example:
    for smi in sorted(Chem.MolToSmiles(x, isomericSmiles=True) for x in isomers):
        print(smi)
Expected:
    F[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)Br
    F[C@@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)Br
    F[C@H](Cl)[C@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)Br
Got:
    F[C@@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)Br
    F[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)[C@@H](Cl)Br
    F[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)[C@H](Cl)[C@H](Cl)[C@@H](Cl)Br


----------------------------------------------------------------------
Ran 25 tests in 26.741s

FAILED (failures=1)
..
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Ran 2 tests in 0.174s

OK
..s...
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Ran 6 tests in 3.104s

OK (skipped=1)
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......
----------------------------------------------------------------------
Ran 9 tests in 0.662s

OK
..................
----------------------------------------------------------------------
Ran 18 tests in 2.401s

OK
...
----------------------------------------------------------------------
Ran 3 tests in 0.276s

OK
........
----------------------------------------------------------------------
Ran 8 tests in 0.095s

OK
..
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Ran 2 tests in 0.074s

OK
..
----------------------------------------------------------------------
Ran 2 tests in 0.063s

OK
.
----------------------------------------------------------------------
Ran 1 test in 0.232s

OK
........
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Ran 8 tests in 0.003s

OK
...
----------------------------------------------------------------------
Ran 3 tests in 0.007s

OK
...
----------------------------------------------------------------------
Ran 3 tests in 0.004s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 0.010s

OK
.......
----------------------------------------------------------------------
Ran 7 tests in 0.057s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 0.066s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 8.755s

OK
..........
----------------------------------------------------------------------
Ran 10 tests in 0.182s

OK
.
----------------------------------------------------------------------
Ran 1 test in 0.000s

OK
..........
----------------------------------------------------------------------
Ran 10 tests in 0.009s

OK
.....
----------------------------------------------------------------------
Ran 5 tests in 0.320s

OK
.....................
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Ran 21 tests in 13.805s

OK
.
----------------------------------------------------------------------
Ran 1 test in 0.000s

OK
...[08:57:39] 

****
Pre-condition Violation
molecule has no conformers
Violation occurred on line 37 in file /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/MolChemicalFeature.cpp
Failed Expression: dp_mol->getNumConformers()
****

.
----------------------------------------------------------------------
Ran 4 tests in 0.093s

OK
..
----------------------------------------------------------------------
Ran 2 tests in 34.590s

OK
..
----------------------------------------------------------------------
Ran 2 tests in 0.354s

OK
...
----------------------------------------------------------------------
Ran 3 tests in 0.052s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 0.073s

OK
.....[08:58:16] WARNING: not removing hydrogen atom without neighbors
[08:58:16] WARNING: not removing hydrogen atom without neighbors
[08:58:16] WARNING: not removing hydrogen atom without neighbors
[08:58:16] WARNING: not removing hydrogen atom without neighbors
[08:58:16] WARNING: not removing hydrogen atom without neighbors
[08:58:16] WARNING: not removing hydrogen atom without neighbors
[08:58:16] WARNING: not removing hydrogen atom without neighbors
[08:58:16] WARNING: not removing hydrogen atom without neighbors
[08:58:16] WARNING: not removing hydrogen atom without neighbors
[08:58:16] WARNING: not removing hydrogen atom without neighbors
[08:58:16] WARNING: not removing hydrogen atom without neighbors
[08:58:16] WARNING: not removing hydrogen atom without neighbors
[08:58:16] WARNING: not removing hydrogen atom without neighbors
[08:58:16] WARNING: not removing hydrogen atom without neighbors
[08:58:17] WARNING: not removing hydrogen atom without neighbors
[08:58:17] WARNING: not removing hydrogen atom without neighbors
[08:58:17] WARNING: not removing hydrogen atom without neighbors
[08:58:17] WARNING: not removing hydrogen atom without neighbors
[08:58:17] WARNING: not removing hydrogen atom without neighbors
.....
----------------------------------------------------------------------
Ran 10 tests in 0.823s

OK
ssssss.....s.....
----------------------------------------------------------------------
Ran 17 tests in 0.479s

OK (skipped=7)
s
----------------------------------------------------------------------
Ran 1 test in 0.000s

OK (skipped=1)
..........
----------------------------------------------------------------------
Ran 10 tests in 1.729s

OK
..[08:58:21] SMARTS Parse Error: syntax error for input: 'boromicacid'
[08:58:21] SMARTS Parse Error: syntax error for input: 'carboxylicacid,acidchlroide'
[08:58:21] SMARTS Parse Error: syntax error for input: 'carboxyliccaid,acidchloride'
[08:58:21] reaction has no reactants
[08:58:21] reaction has no products
[08:58:21] initialization failed
[08:58:21] reaction has no reactants
[08:58:21] reaction has no products
.
----------------------------------------------------------------------
Ran 3 tests in 0.164s

OK
....
----------------------------------------------------------------------
Ran 4 tests in 0.102s

OK
!!! TEST FAILURE:  python UnitTestMol3D.py {}
!!! TEST FAILURE:  python UnitTestDocTestsChem.py {}

139/139 Test  #83: testMolAlign .......................   Passed  819.54 sec

99% tests passed, 2 tests failed out of 139

Total Test time (real) = 920.66 sec

The following tests FAILED:
	 28 - graphmoltestPickler (Child aborted)
	138 - pythonTestDirChem (Failed)
Errors while running CTest
make[2]: *** [Makefile:144: test] Error 8
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dh_auto_test: cd obj-arm-linux-gnueabihf && make -j4 test ARGS\+=-j4 returned exit code 2
make[1]: [debian/rules:107: override_dh_auto_test] Error 2 (ignored)
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make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/CMakeFiles/testMatrices.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/EigenSolvers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/DependInfo.cmake --color=
[  5%] Built target DataStructs
make -f Code/Catalogs/CMakeFiles/Catalogs.dir/build.make Code/Catalogs/CMakeFiles/Catalogs.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Catalogs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Catalogs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Catalogs/CMakeFiles/Catalogs.dir/DependInfo.cmake --color=
[  6%] Built target testRDValue
make -f Code/Query/CMakeFiles/testQuery.dir/build.make Code/Query/CMakeFiles/testQuery.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Query /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Query /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Query/CMakeFiles/testQuery.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Numerics/CMakeFiles/testMatrices.dir/build.make Code/Numerics/CMakeFiles/testMatrices.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/build.make Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/Numerics/CMakeFiles/testMatrices.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Catalogs/CMakeFiles/Catalogs.dir/build.make Code/Catalogs/CMakeFiles/Catalogs.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/Catalogs/CMakeFiles/Catalogs.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Query/CMakeFiles/testQuery.dir/build.make Code/Query/CMakeFiles/testQuery.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/Query/CMakeFiles/testQuery.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  7%] Built target EigenSolvers
[  7%] Built target testMatrices
make -f Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/build.make Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/depend
make -f Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/build.make Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataManip/MetricMatrixCalc /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/DependInfo.cmake --color=
[  8%] Built target Catalogs
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataManip/MetricMatrixCalc/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/DependInfo.cmake --color=
make -f Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/depend
[  8%] Built target testQuery
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/DependInfo.cmake --color=
make -f Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/build.make Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/Cluster/Murtagh /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/build.make Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/build.make Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/build.make Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  8%] Built target testMatCalc
make -f Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build.make Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/InfoTheory /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/InfoTheory /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/DependInfo.cmake --color=
[  8%] Built target SimDivPickers
make -f Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/build.make Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/depend
[  8%] Built target rdMetricMatrixCalc
make -f Code/DataStructs/CMakeFiles/testDataStructs.dir/build.make Code/DataStructs/CMakeFiles/testDataStructs.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/RDBoost/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDBoost/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/testDataStructs.dir/DependInfo.cmake --color=
[  8%] Built target Clustering
make -f Code/DataStructs/CMakeFiles/testFPB.dir/build.make Code/DataStructs/CMakeFiles/testFPB.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/testFPB.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build.make Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/build.make Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/DataStructs/CMakeFiles/testDataStructs.dir/build.make Code/DataStructs/CMakeFiles/testDataStructs.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/DataStructs/CMakeFiles/testDataStructs.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/DataStructs/CMakeFiles/testFPB.dir/build.make Code/DataStructs/CMakeFiles/testFPB.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/DataStructs/CMakeFiles/testFPB.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  8%] Built target InfoTheory
make -f Code/DataStructs/CMakeFiles/testMultiFPB.dir/build.make Code/DataStructs/CMakeFiles/testMultiFPB.dir/depend
[  9%] Built target testDataStructs
[  9%] Built target rdBase
make -f Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/build.make Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs/CMakeFiles/testMultiFPB.dir/DependInfo.cmake --color=
make -f Code/Geometry/CMakeFiles/RDGeometryLib.dir/build.make Code/Geometry/CMakeFiles/RDGeometryLib.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/RDGeometryLib.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DataStructs/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/DependInfo.cmake --color=
[  9%] Built target testFPB
make -f Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/DataStructs/CMakeFiles/testMultiFPB.dir/build.make Code/DataStructs/CMakeFiles/testMultiFPB.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/DataStructs/CMakeFiles/testMultiFPB.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Geometry/CMakeFiles/RDGeometryLib.dir/build.make Code/Geometry/CMakeFiles/RDGeometryLib.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/build.make Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build.make Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/Geometry/CMakeFiles/RDGeometryLib.dir/build'.
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make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/SimDivPickers/CMakeFiles/testSimDivPickers.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[  9%] Built target testMultiFPB
make -f Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build.make Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/depend
[ 10%] Built target RDGeometryLib
[ 10%] Built target testSimDivPickers
make -f Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build.make Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/SimDivPickers/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/DependInfo.cmake --color=
make -f Code/ML/Data/CMakeFiles/cQuantize.dir/build.make Code/ML/Data/CMakeFiles/cQuantize.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/Data /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/Data /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/Data/CMakeFiles/cQuantize.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ML/InfoTheory/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/DependInfo.cmake --color=
[ 11%] Built target cDataStructs
make -f Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ChemicalFeatures /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build.make Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ML/Data/CMakeFiles/cQuantize.dir/build.make Code/ML/Data/CMakeFiles/cQuantize.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build.make Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/ML/Data/CMakeFiles/cQuantize.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 12%] Built target ChemicalFeatures
[ 12%] Built target cQuantize
[ 12%] Built target rdSimDivPickers
make -f Code/Geometry/CMakeFiles/testTransforms.dir/build.make Code/Geometry/CMakeFiles/testTransforms.dir/depend
make -f Code/Geometry/CMakeFiles/testGrid.dir/build.make Code/Geometry/CMakeFiles/testGrid.dir/depend
make -f Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build.make Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/testTransforms.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry/CMakeFiles/testGrid.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Geometry/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/DependInfo.cmake --color=
[ 13%] Built target rdInfoTheory
make -f Code/Numerics/Alignment/CMakeFiles/Alignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/Alignment.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Alignment /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/CMakeFiles/Alignment.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Geometry/CMakeFiles/testGrid.dir/build.make Code/Geometry/CMakeFiles/testGrid.dir/build
make -f Code/Geometry/CMakeFiles/testTransforms.dir/build.make Code/Geometry/CMakeFiles/testTransforms.dir/build
make -f Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build.make Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/Geometry/CMakeFiles/testTransforms.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/Geometry/CMakeFiles/testGrid.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Numerics/Alignment/CMakeFiles/Alignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/Alignment.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/Numerics/Alignment/CMakeFiles/Alignment.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 13%] Built target testGrid
[ 13%] Built target testTransforms
[ 14%] Built target rdGeometry
make -f Code/GraphMol/CMakeFiles/GraphMol.dir/build.make Code/GraphMol/CMakeFiles/GraphMol.dir/depend
make -f Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/depend
[ 14%] Built target Alignment
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ChemicalFeatures /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/DependInfo.cmake --color=
make -f Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/depend
make -f Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build.make Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Alignment /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Alignment/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/GraphMol.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build.make Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build.make Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
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make -f Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build.make Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/GraphMol.dir/build.make Code/GraphMol/CMakeFiles/GraphMol.dir/build
[ 14%] Built target testChemicalFeatures
[ 14%] Built target testAlignment
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/CMakeFiles/GraphMol.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 14%] Built target rdAlignment
[ 19%] Built target GraphMol
make -f Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/depend
make -f Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/depend
make -f Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/depend
make -f Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolTransforms /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Substruct /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
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make -f Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/build
make -f Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
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make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Trajectory/CMakeFiles/Trajectory.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 20%] Built target Trajectory
[ 20%] Built target SubstructMatch
[ 20%] Built target MolTransforms
make -f Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/depend
make -f Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/depend
make -f Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build.make Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PartialCharges /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolTransforms/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/DependInfo.cmake --color=
[ 22%] Built target SmilesParse
make -f Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build.make Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 22%] Built target PartialCharges
[ 22%] Built target Subgraphs
make -f Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/depend
make -f Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/DependInfo.cmake --color=
[ 23%] Built target rdMolTransforms
[ 23%] Built target ShapeHelpers
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ReducedGraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/DependInfo.cmake --color=
make -f Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/depend
make -f Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ReducedGraphs/CMakeFiles/ReducedGraphs.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Wrap/CMakeFiles/rdtrajectory.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 23%] Built target ReducedGraphs
[ 23%] Built target MolCatalog
make -f Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/depend
make -f Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build.make Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/depend
[ 23%] Built target rdtrajectory
make -f Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ChemicalFeatures/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Optimizer /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/DependInfo.cmake --color=
[ 24%] Built target SLNParse
make -f Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build
make -f Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build.make Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
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make[3]: Nothing to be done for 'Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 25%] Built target Optimizer
make -f Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/depend
[ 26%] Built target rdqueries
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/DependInfo.cmake --color=
make -f Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolcpTest.dir/depend
[ 26%] Built target rdChemicalFeatures
make -f Code/GraphMol/CMakeFiles/graphmoltestCanon.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestCanon.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolcpTest.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestCanon.dir/DependInfo.cmake --color=
[ 27%] Built target Depictor
make -f Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmoltestCanon.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestCanon.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmoltestCanon.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolMemTest1.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolcpTest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 27%] Built target graphmolqueryTest
make -f Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolIterTest.dir/depend
[ 27%] Built target graphmoltestCanon
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolIterTest.dir/DependInfo.cmake --color=
make -f Code/GraphMol/CMakeFiles/test-valgrind.dir/build.make Code/GraphMol/CMakeFiles/test-valgrind.dir/depend
[ 27%] Built target graphmolMemTest1
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/test-valgrind.dir/DependInfo.cmake --color=
make -f Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/DependInfo.cmake --color=
[ 28%] Built target graphmolcpTest
make -f Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/test-valgrind.dir/build.make Code/GraphMol/CMakeFiles/test-valgrind.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolIterTest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/CMakeFiles/test-valgrind.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 28%] Built target graphmolIterTest
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/depend
[ 29%] Built target test-valgrind
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/DependInfo.cmake --color=
make -f Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/DependInfo.cmake --color=
[ 30%] Built target ChemTransforms
make -f Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/depend
[ 30%] Built target smaTest1
make -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/SmilesParse/CMakeFiles/smiTest2.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FilterCatalog/CMakeFiles/FilterCatalog.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build
[ 31%] Built target smiTest2
make -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Subgraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 32%] Built target FilterCatalog
make -f Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/depend
[ 32%] Built target testSubgraphs1
make -f Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PartialCharges /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build.make Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build
[ 34%] Built target Fingerprints
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build.make Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/PartialCharges/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/build.make Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/build
[ 34%] Built target testSubgraphs2
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/PartialCharges/CMakeFiles/testPartialCharges.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build.make Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 34%] Built target testPartialCharges
[ 35%] Built target FragCatalog
make -f Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/depend
make -f Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ReducedGraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build
[ 36%] Built target rdPartialCharges
make -f Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ReducedGraphs/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ReducedGraphs/CMakeFiles/testReducedGraphs.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 37%] Built target MolChemicalFeatures
make -f Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SubstructLibrary /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/build.make Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ReducedGraphs/Wrap/CMakeFiles/rdReducedGraphs.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 37%] Built target testReducedGraphs
make -f Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/DependInfo.cmake --color=
[ 37%] Built target rdShapeHelpers
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/build.make Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/depend
make -f Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SLNParse/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/SubstructLibrary/CMakeFiles/SubstructLibrary.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 37%] Built target rdReducedGraphs
make -f Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build.make Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 38%] Built target SubstructLibrary
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/build.make Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/build
make -f Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/Numerics/Optimizer /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 38%] Built target testSLNParse
make -f Code/ForceField/CMakeFiles/ForceField.dir/build.make Code/ForceField/CMakeFiles/ForceField.dir/depend
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build.make Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build
[ 39%] Built target rdSLNParse
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/CMakeFiles/ForceField.dir/DependInfo.cmake --color=
make -f Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/DependInfo.cmake --color=
[ 40%] Built target testOptimizer
make -f Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build.make Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ForceField/CMakeFiles/ForceField.dir/build.make Code/ForceField/CMakeFiles/ForceField.dir/build
[ 42%] Built target rdchem
make -f Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/ForceField/CMakeFiles/ForceField.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build.make Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Fingerprints/Wrap/CMakeFiles/rdFingerprintGenerator.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 45%] Built target ForceField
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/build
make -f Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 50%] Built target FileParsers
[ 50%] Built target rdFingerprintGenerator
make -f Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/depend
make -f Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/DependInfo.cmake --color=
[ 51%] Built target rdMolChemicalFeatures
make -f Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/depend
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/build.make Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build.make Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolTestsCatch.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build
[ 53%] Built target ForceFieldHelpers
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmoltestPicklerGlobalSetting.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/DependInfo.cmake --color=
[ 54%] Built target graphmolMolOpsTest
[ 54%] Built target graphmolTestsCatch
make -f Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/depend
make -f Code/GraphMol/CMakeFiles/molBundleTest.dir/build.make Code/GraphMol/CMakeFiles/molBundleTest.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/molBundleTest.dir/DependInfo.cmake --color=
[ 54%] Built target graphmoltestPicklerGlobalSetting
make -f Code/GraphMol/CMakeFiles/hanoiTest.dir/build.make Code/GraphMol/CMakeFiles/hanoiTest.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/hanoiTest.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build.make Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build
make -f Code/GraphMol/CMakeFiles/molBundleTest.dir/build.make Code/GraphMol/CMakeFiles/molBundleTest.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/CMakeFiles/molBundleTest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/hanoiTest.dir/build.make Code/GraphMol/CMakeFiles/hanoiTest.dir/build
[ 55%] Built target graphmoltestChirality
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/CMakeFiles/hanoiTest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/build.make Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/DependInfo.cmake --color=
[ 56%] Built target graphmoltestPickler
[ 56%] Built target molBundleTest
make -f Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/depend
make -f Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build.make Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Depictor/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/DependInfo.cmake --color=
[ 57%] Built target hanoiTest
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/build.make Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/CMakeFiles/resMolSupplierTest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/build.make Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build.make Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 57%] Built target resMolSupplierTest
make -f Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/depend
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 57%] Built target testDepictor
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/DependInfo.cmake --color=
[ 58%] Built target rdDepictor
make -f Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/depend
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/DependInfo.cmake --color=
[ 58%] Built target smiTest1
make -f Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/SmilesParse/CMakeFiles/cxsmilesTest.dir/build'.
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build.make Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build
[ 59%] Built target cxsmilesTest
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/SmilesParse/CMakeFiles/smiTestCatch.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/depend
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 59%] Built target smiTestCatch
make -f Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/depend
[ 59%] Built target testMol2ToMol
make -f Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/DependInfo.cmake --color=
make -f Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build
[ 59%] Built target testTplParser
make -f Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build
[ 59%] Built target testMolWriter
make -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/testSequence.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/testExtendedStereoParsing.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 60%] Built target testMolSupplier
[ 60%] Built target testSequence
make -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/depend
make -f Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Substruct /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/DependInfo.cmake --color=
make -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/build
[ 61%] Built target testExtendedStereoParsing
make -f Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build.make Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build
make -f Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build.make Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build
[ 61%] Built target fileParsersTest1
make -f Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemTransforms /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FileParsers/CMakeFiles/fileParsersCatchTest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 62%] Built target fileParsersCatchTest
[ 62%] Built target testSubstructMatch
make -f Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/depend
make -f Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build.make Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/depend
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build.make Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FilterCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 64%] Built target Descriptors
make -f Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build.make Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build
[ 65%] Built target testChemTransforms
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build.make Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build
make -f Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build.make Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FragCatalog/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FilterCatalog/CMakeFiles/filterCatalogTest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FilterCatalog/Wrap/CMakeFiles/rdfiltercatalog.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build.make Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 66%] Built target filterCatalogTest
make -f Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/depend
[ 67%] Built target rdfiltercatalog
make -f Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build.make Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 68%] Built target testFragCatalog
make -f Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build.make Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Descriptors/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/build.make Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Descriptors/CMakeFiles/testAUTOCORR2D.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 69%] Built target rdfragcatalog
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build.make Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build
[ 69%] Built target testDescriptors
[ 69%] Built target testAUTOCORR2D
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/depend
make -f Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Fingerprints /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolTransforms /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 69%] Built target rdMolDescriptors
make -f Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build.make Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build.make Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build
[ 69%] Built target testFingerprints
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Fingerprints/CMakeFiles/testFingerprintGenerators.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolChemicalFeatures /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/build
[ 70%] Built target testMolTransforms
[ 70%] Built target testFingerprintGenerators
make -f Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/depend
make -f Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build.make Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolCatalog/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build.make Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 70%] Built target rdForceFieldHelpers
make -f Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build.make Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build
[ 71%] Built target testFeatures
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/depend
make -f Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build.make Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolHash /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build
[ 71%] Built target rdMolCatalog
make -f Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/depend
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/build
[ 72%] Built target testMolCatalog
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MMPA /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/DependInfo.cmake --color=
make -f Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/build.make Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FMCS/CMakeFiles/FMCS.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolHash/CMakeFiles/MolHash.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/DependInfo.cmake --color=
[ 73%] Built target FMCS
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/depend
make -f Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build
[ 73%] Built target MolHash
make -f Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Trajectory /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SubstructLibrary /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MMPA/CMakeFiles/MMPA.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/build.make Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/StructChecker/CMakeFiles/StructChecker.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build.make Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build
[ 73%] Built target MMPA
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build.make Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build
make -f Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/SubstructLibrary/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Trajectory/CMakeFiles/trajectoryTest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/SubstructLibrary/CMakeFiles/substructLibraryTest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 75%] Built target StructChecker
make -f Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RGroupDecomposition /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/DependInfo.cmake --color=
[ 76%] Built target trajectoryTest
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/depend
make -f Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build.make Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build
[ 76%] Built target substructLibraryTest
make -f Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build.make Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/UFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/UFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/SubstructLibrary/Wrap/CMakeFiles/rdSubstructLibrary.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/RGroupDecomposition/CMakeFiles/RGroupDecomposition.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 76%] Built target rdSubstructLibrary
make -f Code/DistGeom/CMakeFiles/DistGeometry.dir/build.make Code/DistGeom/CMakeFiles/DistGeometry.dir/depend
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build.make Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom/CMakeFiles/DistGeometry.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 76%] Built target RGroupDecomposition
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/DependInfo.cmake --color=
[ 77%] Built target testUFFForceField
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/DistGeom/CMakeFiles/DistGeometry.dir/build.make Code/DistGeom/CMakeFiles/DistGeometry.dir/build
make -f Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build.make Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/DistGeom/CMakeFiles/DistGeometry.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 79%] Built target rdmolfiles
make -f Code/GraphMol/CMakeFiles/graphmolTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolTest1.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/CMakeFiles/graphmolTest1.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 80%] Built target DistGeometry
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build.make Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build
make -f Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/CMakeFiles/graphmolTest1.dir/build.make Code/GraphMol/CMakeFiles/graphmolTest1.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/DependInfo.cmake --color=
[ 81%] Built target MolAlign
make -f Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/CMakeFiles/graphmolTest1.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/DependInfo.cmake --color=
[ 81%] Built target rdForceField
make -f Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build.make Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 81%] Built target graphmolTest1
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/DependInfo.cmake --color=
make -f Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/build.make Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/FMCS/Test /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build.make Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FMCS/CMakeFiles/testFMCS.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build.make Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/build.make Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/build
[ 81%] Built target testFMCS
make -f Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FMCS/Wrap/CMakeFiles/rdFMCS.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/FMCS/Test/CMakeFiles/FMCStest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolHash /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/DependInfo.cmake --color=
[ 83%] Built target ChemReactions
make -f Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build.make Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolHash/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/DependInfo.cmake --color=
[ 83%] Built target rdFMCS
[ 83%] Built target FMCStest
make -f Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/depend
make -f Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build.make Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/depend
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/build.make Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MMPA /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MMPA/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolHash/CMakeFiles/testMolHash.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build.make Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolHash/Wrap/CMakeFiles/rdMolHash.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build.make Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 83%] Built target testMolHash
make -f Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build.make Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build
make -f Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/build.make Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MMPA/CMakeFiles/testMMPA.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MMPA/Wrap/CMakeFiles/rdMMPA.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 84%] Built target rdMolHash
make -f Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/build.make Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/StructChecker/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/DependInfo.cmake --color=
[ 84%] Built target testMMPA
[ 84%] Built target rdMMPA
make -f Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/depend
make -f Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/depend
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/build.make Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RGroupDecomposition /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/RGroupDecomposition/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/StructChecker/CMakeFiles/testStructChecker.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/build.make Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/StructChecker/Wrap/CMakeFiles/rdStructChecker.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/build.make Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/build
[ 85%] Built target testStructChecker
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/depend
make -f Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/build.make Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/RGroupDecomposition/CMakeFiles/testRGroupDecomp.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/RGroupDecomposition/Wrap/CMakeFiles/rdRGroupDecomposition.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/DependInfo.cmake --color=
[ 85%] Built target rdStructChecker
make -f Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/DependInfo.cmake --color=
[ 85%] Built target testRGroupDecomp
make -f Code/DistGeom/CMakeFiles/testDistGeom.dir/build.make Code/DistGeom/CMakeFiles/testDistGeom.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom/CMakeFiles/testDistGeom.dir/DependInfo.cmake --color=
[ 85%] Built target rdRGroupDecomposition
make -f Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build.make Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/DistGeom/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/DistGeom/CMakeFiles/testDistGeom.dir/build.make Code/DistGeom/CMakeFiles/testDistGeom.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/DistGeom/CMakeFiles/testDistGeom.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/MolStandardize.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build.make Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 86%] Built target DistGeomHelpers
[ 86%] Built target testDistGeom
make -f Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/depend
make -f Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/DependInfo.cmake --color=
[ 90%] Built target MolStandardize
make -f Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/DependInfo.cmake --color=
[ 90%] Built target DistGeom
make -f Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build.make Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ChemReactions/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/build
make -f Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ChemReactions/CMakeFiles/rxnTestCatch.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build.make Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ChemReactions/CMakeFiles/testReactionFingerprints.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build.make Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build
[ 91%] Built target testReaction
[ 91%] Built target rxnTestCatch
make -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/depend
make -f Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/MMFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/UFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/DependInfo.cmake --color=
[ 92%] Built target testReactionFingerprints
make -f Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build.make Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ForceFieldHelpers/CrystalFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/DependInfo.cmake --color=
[ 93%] Built target rdChemReactions
make -f Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build.make Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build.make Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ForceFieldHelpers/CrystalFF/CMakeFiles/testCrystalForceField.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build.make Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build
[ 93%] Built target testUFFForceFieldHelpers
make -f Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build.make Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/depend
[ 94%] Built target testMMFFForceFieldHelpers
make -f Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/DistGeomHelpers/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/DependInfo.cmake --color=
[ 94%] Built target testCrystalForceField
make -f Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build.make Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolAlign/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/DependInfo.cmake --color=
[ 94%] Built target testDistGeomHelpers
make -f Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/ShapeHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build.make Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build.make Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build.make Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build.make Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 94%] Built target testMolAlign
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/depend
[ 94%] Built target rdDistGeom
make -f Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/DependInfo.cmake --color=
[ 95%] Built target rdMolAlign
make -f Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/DependInfo.cmake --color=
[ 95%] Built target testShapeHelpers
make -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molNormalizeTest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolDraw2D/CMakeFiles/MolDraw2D.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molValidateTest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeTest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 96%] Built target molNormalizeTest
make -f Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/depend
[ 97%] Built target MolDraw2D
make -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/DependInfo.cmake --color=
[ 97%] Built target molValidateTest
make -f Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/DependInfo.cmake --color=
[ 97%] Built target molStandardizeTest
make -f Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molChargeTest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molStandardizeSmallTest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/build.make Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molTautomerTest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolStandardize/CMakeFiles/molFragmentTest.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 97%] Built target molChargeTest
make -f Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/build.make Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/depend
[ 97%] Built target molStandardizeSmallTest
make -f Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/build.make Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolStandardize/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/DependInfo.cmake --color=
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/ForceField/MMFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/MMFF /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/DependInfo.cmake --color=
[ 98%] Built target molTautomerTest
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/DependInfo.cmake --color=
[ 98%] Built target molFragmentTest
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/DependInfo.cmake --color=
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/build.make Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/build.make Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolStandardize/Wrap/CMakeFiles/rdMolStandardize.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build.make Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DRxnTest1.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 98%] Built target testMMFFForceField
make -f Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/MolDraw2D/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/DependInfo.cmake --color=
[ 99%] Built target rdMolStandardize
make -f Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/depend
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
cd /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<<BUILDDIR>>/rdkit-201809.1+dfsg /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/DependInfo.cmake --color=
[ 99%] Built target moldraw2DRxnTest1
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build.make Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make -f Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build.make Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolDraw2D/Wrap/CMakeFiles/rdMolDraw2D.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 99%] Built target rdMolDraw2D
make[3]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[3]: Nothing to be done for 'Code/GraphMol/MolDraw2D/CMakeFiles/moldraw2DTest1.dir/build'.
make[3]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
[ 99%] Built target rdmolops
[100%] Built target moldraw2DTest1
make[2]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
/usr/bin/cmake -E cmake_progress_start /<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf/CMakeFiles 0
make -f CMakeFiles/Makefile2 preinstall
make[2]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
make[2]: Nothing to be done for 'preinstall'.
make[2]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "None"
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/cmake/rdkit/rdkit-targets.cmake
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/cmake/rdkit/rdkit-targets-none.cmake
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/cmake/rdkit/rdkit-config.cmake
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/cmake/rdkit/rdkit-config-version.cmake
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/utils
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/utils/test2.gif
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/utils/retest.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/utils/test3.gif
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/utils/chemutils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/utils/cactvs.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/utils/comhack.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/utils/listutils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/utils/spiral.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/utils/test1.gif
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/utils/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/utils/fileutils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/utils/chemdraw.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/utils/chemdraw_qax.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/utils/12h.gif
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/RDLogger.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Avalon
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Avalon/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/DataStructs
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/DataStructs/BitEnsemble.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/DataStructs/TopNContainer.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/DataStructs/BitEnsembleDb.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/DataStructs/LazySignature.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/DataStructs/BitUtils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/DataStructs/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/DataStructs/VectCollection.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/DataStructs/HierarchyVis.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/DistanceGeometry
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/DistanceGeometry/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Numerics
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Numerics/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/RDRandom.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Dbase
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Dbase/DbInfo.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Dbase/DbReport.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Dbase/DbConnection.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Dbase/DbModule.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Dbase/DbUtils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Dbase/DbResultSet.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Dbase/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Dbase/StorageUtils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/TestRunner.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/SimDivFilters
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/SimDivFilters/SimilarityPickers.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/SimDivFilters/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/VLib
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/VLib/Output.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/VLib/Node.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/VLib/Supply.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/VLib/Filter.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/VLib/Transform.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/VLib/NodeLib
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/VLib/NodeLib/SDSupply.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/VLib/NodeLib/DbMolSupply.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/VLib/NodeLib/demo.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/VLib/NodeLib/SmilesDupeFilter.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/VLib/NodeLib/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/VLib/NodeLib/SmilesSupply.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/VLib/NodeLib/SmilesOutput.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/VLib/NodeLib/SmartsMolFilter.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/VLib/NodeLib/DbPickleSupplier.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/VLib/NodeLib/SmartsRemover.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/VLib/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Geometry
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Geometry/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Fragments.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/FastSDMolSupplier.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/AtomPairs
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/AtomPairs/Torsions.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/AtomPairs/Utils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/AtomPairs/Sheridan.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/AtomPairs/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/AtomPairs/Pairs.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Randomize.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Graphs.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/PyMol.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/FeatMaps
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/FeatMaps/FeatMapUtils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/FeatMaps/FeatMaps.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/FeatMaps/FeatMapPoint.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/FeatMaps/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/FeatMaps/FeatMapParser.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/TorsionFingerprints.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolSurf.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MCS.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/EnumerateStereoisomers.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Crippen.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/EState
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/EState/EState.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/EState/EState_VSA.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/EState/Fingerprinter.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/EState/AtomTypes.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/EState/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Fraggle
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Fraggle/FraggleSim.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Fraggle/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/QED.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/EnumerateHeterocycles.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Recap.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/ChemicalFeatures.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolStandardize
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolStandardize/metal.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolStandardize/validations.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolStandardize/validate.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolStandardize/normalize.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolStandardize/standardize.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolStandardize/utils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolStandardize/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolStandardize/tautomer.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolStandardize/fragment.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolStandardize/errors.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolStandardize/resonance.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolStandardize/charge.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/PandasTools.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/ChemicalForceFields.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Descriptors3D.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Pharm2D
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Pharm2D/Matcher.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Pharm2D/Gobbi_Pharm2D.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Pharm2D/Generate.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Pharm2D/Utils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Pharm2D/LazyGenerator.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Pharm2D/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Pharm2D/SigFactory.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/ReducedGraphs.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/ChemUtils
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/ChemUtils/TemplateExpand.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/ChemUtils/BulkTester.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/ChemUtils/DescriptorUtilities.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/ChemUtils/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/ChemUtils/AlignDepict.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/ChemUtils/SDFToCSV.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MACCSkeys.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Lipinski.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/DSViewer.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Draw
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Draw/IPythonConsole.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Draw/spingCanvas.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Draw/mplCanvas.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Draw/qtCanvas.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Draw/cairoCanvas.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Draw/SimilarityMaps.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Draw/canvasbase.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Draw/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Draw/aggCanvas.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Draw/MolDrawing.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Draw/FreeSans.ttf
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Features
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Features/FeatDirUtilsRD.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Features/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Features/ShowFeats.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/BRICS.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/SimpleEnum
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/SimpleEnum/Enumerator.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/SimpleEnum/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/FunctionalGroups.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/FragmentCatalog.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolDb
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolDb/FingerprintUtils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolDb/Loader_sa.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolDb/Loader.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolDb/Loader_orig.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolDb/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/AllChem.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/fmcs
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/fmcs/fmcs.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/fmcs/fmcs
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/fmcs/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/BuildFragmentCatalog.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolKey
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolKey/MolKey.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolKey/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolKey/InchiInfo.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Pharm3D
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Pharm3D/EmbedLib.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Pharm3D/ExcludedVolume.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Pharm3D/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Pharm3D/Pharmacophore.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/SATIS.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/SaltRemover.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/inchi.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/PeriodicTable.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Fingerprints
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Fingerprints/MolSimilarity.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Fingerprints/ClusterMols.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Fingerprints/DbFpSupplier.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Fingerprints/SimilarityScreener.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Fingerprints/FingerprintMols.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Fingerprints/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/PropertyMol.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/FilterCatalog.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/GraphDescriptors.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/FeatFinderCLI.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/TemplateAlign.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Suppliers
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Suppliers/DbMolSupplier.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Suppliers/MolSupplier.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Suppliers/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolCatalog.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Scaffolds
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Scaffolds/MurckoScaffold.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Scaffolds/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/ShowMols.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/FragmentMatcher.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Subshape
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Subshape/SubshapeBuilder.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Subshape/testCombined.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Subshape/SubshapeObjects.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Subshape/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Subshape/SubshapeAligner.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Subshape/BuilderUtils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Descriptors.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ForceField
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ForceField/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/DataManip
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/DataManip/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/DataManip/Metric
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/DataManip/Metric/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/_py2_pickle.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/six.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/tests
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/tests/pidtest.pyc
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/tests/testallps.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/tests/pstests.pyc
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/tests/testallps.ps
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/tests/pstests.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/tests/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/tests/pidtest.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/patches
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/patches/Imaging-1.1-fixplugin-path
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/patches/Imaging-1.1.1.diff
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/stringformat.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/Qt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/Qt/pidQt.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/Qt/pidQt4.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/Qt/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/README
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/SVG
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/SVG/pidSVG.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/SVG/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/Pyart
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/Pyart/pidPyart.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/Pyart/Fontmapping.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/Pyart/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pidPIL.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-12.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-18.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-8.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-12.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-24.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-18.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-10.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/symbol-10.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/symbol-24.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-10.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-14.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-8.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-8.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/symbol-14.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-18.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-18.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-10.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-14.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-14.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-10.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-12.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-24.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/symbol-24.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-12.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-14.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-8.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-8.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-10.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-18.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/symbol-12.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-8.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-10.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-12.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-8.pil.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-24.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-24.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-14.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-18.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-8.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/symbol-12.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/symbol-8.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-18.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-24.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-10.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-14.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/symbol-8.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-24.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-10.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-14.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/removemedium.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-12.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-12.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-24.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-24.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-12.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-12.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-14.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-12.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-14.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-10.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-8.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-10.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-12.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/symbol-14.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-24.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-18.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-18.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-10.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-14.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/symbol-18.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-18.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/metrics.dat
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-14.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-8.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-24.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-14.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-8.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-8.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-18.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/symbol-10.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-bold-8.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/courier-18.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/symbol-18.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-10.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-12.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/times-bold-24.pil
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PIL/pilfonts/helvetica-bold-24.pbm
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/pid.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/examples
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/examples/formatted-strings.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/examples/tkCanvasPIL-with-scrollbars.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/examples/tkCanvas-with-scrollbars.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PS
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PS/psmetrics.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PS/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PS/latin1MetricsCache.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PS/fontinfo.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PS/pidPS.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/pagesizes.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PDF
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PDF/pdfgen.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PDF/pdfmetrics.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PDF/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PDF/pidPDF.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PDF/pdfgeom.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PDF/pdfutils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/PDF/pdfdoc.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/TK
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/TK/pidTK.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/TK/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/WX
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/WX/pidWX.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/WX/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/WX/pidWxDc.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/ReportLab
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/ReportLab/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/ReportLab/pidReportLab.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/util
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/util/HTMLPiddler.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/util/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/utils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/sping/colors.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/RDConfig.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/MatOps.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Neural
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Neural/NetNode.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Neural/ActFuncs.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Neural/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Neural/Trainers.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Neural/Network.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Neural/architecture.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Neural/CrossValidate.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Data
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Data/FindQuantBounds.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Data/Stats.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Data/DataUtils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Data/SplitData.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Data/Transforms.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Data/Quantize.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Data/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Data/MLData.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/GrowComposite.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/files.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Descriptors
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Descriptors/Parser.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Descriptors/MoleculeDescriptors.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Descriptors/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Descriptors/CompoundDescriptors.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Descriptors/Descriptors.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/KNN
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/KNN/DistFunctions.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/KNN/KNNClassificationModel.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/KNN/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/KNN/KNNModel.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/KNN/KNNRegressionModel.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/KNN/CrossValidate.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Scoring
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Scoring/Scoring.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Scoring/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/DecTree
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/DecTree/Tree.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/DecTree/TreeUtils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/DecTree/SigTree.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/DecTree/ID3.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/DecTree/TreeVis.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/DecTree/DecTree.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/DecTree/BuildSigTree.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/DecTree/QuantTree.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/DecTree/randomtest.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/DecTree/Forest.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/DecTree/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/DecTree/PruneTree.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/DecTree/BuildQuantTree.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/DecTree/CrossValidate.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/NaiveBayes
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/NaiveBayes/ClassificationModel.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/NaiveBayes/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/NaiveBayes/CrossValidate.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Cluster
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Cluster/murtagh_test.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Cluster/Butina.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Cluster/Murtagh.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Cluster/Resemblance.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Cluster/Clusters.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Cluster/ClusterUtils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Cluster/Standardize.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Cluster/ClusterVis.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Cluster/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Composite
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Composite/Composite.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Composite/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Composite/AdjustComposite.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Composite/BayesComposite.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/InfoTheory
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/InfoTheory/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/InfoTheory/BitClusterer.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/InfoTheory/entropy.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/InfoTheory/BitRank.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/EnrichPlot.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/SLT
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/SLT/Risk.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/SLT/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/AnalyzeComposite.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/CompositeRun.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/MLUtils
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/MLUtils/VoteImg.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/MLUtils/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/BuildComposite.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/ModelPackage
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/ModelPackage/PackageUtils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/ModelPackage/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/ModelPackage/Packager.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/ScreenComposite.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/rddata.sql
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/Functional_Group_Hierarchy.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/NCI
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/NCI/first_200.tpsa.csv
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/NCI/first_5K.smi
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/NCI/first_5k.tpsa.csv
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/NCI/first_200.props.sdf
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/MolStandardize
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/MolStandardize/acid_base_pairs.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/MolStandardize/acid_base_pairs2.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/MolStandardize/fragmentPatterns.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/MolStandardize/tautomerTransforms.in
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/MolStandardize/normalizations.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/BaseFeatures.fdef
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/Pains
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/Pains/test_data
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/Pains/test_data/test_set3.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/Pains/test_data/run_tests.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/Pains/test_data/wehi_mols.csv
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/Pains/README.md
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/Pains/wehi_pains.csv
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/Salts.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/DTDs
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/DTDs/validate.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/DTDs/RD_Model.dtd
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/DTDs/RD_Dataset.dtd
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/SmartsLib
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/SmartsLib/tests
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/SmartsLib/tests/mols.1000.pkl.gz
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/SmartsLib/tests/bench2.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/SmartsLib/tests/fps.1000.counts.pkl.gz
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/SmartsLib/patty_rules.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/SmartsLib/RLewis_smarts.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/Crippen.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/RDTests.sqlt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/FragmentDescriptors.csv
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/struchk
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/struchk/checkfgs.chk
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/struchk/checkfgs.trn
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/struchk/checkfgs.opt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/FunctionalGroups.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Data/RDData.sqlt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Images
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Images/logo_plain.inkscape.svg
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Images/logo.png
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Images/logo.ai
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Code
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Code/EnhancedStereo.md
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Code/Chem
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Code/Chem/Pharm2D.triangles.jpg
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Code/Chem/FragmentCatalogs.html
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_trans_base.png
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm3D.ExcludedVolume.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmilesDupeFilter.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.LazySignature.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataManip.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.GraphDescriptors.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.HierarchyVis.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.TreeVis.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.chemdraw_qax.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.BuildSigTree.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.Generate.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdDepictor.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdchem.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.chemdraw.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolKey.MolKey.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdFingerprintGenerator.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Standardize.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Clusters.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.AnalyzeComposite.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.murtagh_test.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm3D.EmbedLib.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.SimDivFilters.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ForceField.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.MatOps.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdChemReactions.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Scaffolds.ScaffoldTree.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.FeatMaps.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdtrajectory.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.listutils.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.ClusterUtils.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdCoordGen.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.ModelPackage.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbInfo.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.TemplateAlign.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdmolops.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemicalForceFields.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.Utils.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.FingerprintUtils.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fraggle.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataManip.Metric.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolTransforms.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolCatalog.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.spiral.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbUtils.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.FeatMapUtils.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.DescriptorUtilities.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.SubshapeAligner.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.Matcher.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Crippen.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.BuilderUtils.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.TorsionFingerprints.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbConnection.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FilterCatalog.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FastSDMolSupplier.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Features.FeatDirUtilsRD.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbModule.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.MLUtils.VoteImg.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.Supply.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmartsMolFilter.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Scoring.Scoring.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdFreeSASA.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.ID3.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.randomtest.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.RDConfig.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.StorageUtils.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.DbFpSupplier.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ShowMols.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Butina.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.DbMolSupply.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.ActFuncs.rst
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Lipinski.rst
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdqueries.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.ClusterVis.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Avalon.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.SubshapeBuilder.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdPartialCharges.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.PandasTools.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.Loader_sa.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.Parser.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FunctionalGroups.rst
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolChemicalFeatures.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolCatalog.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.CrossValidate.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolDescriptors.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.KNNModel.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DistanceGeometry.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.SigTree.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.cairoCanvas.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.rst
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.AtomTypes.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.BRICS.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.VectCollection.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdForceFieldHelpers.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.CompositeRun.rst
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolAlign.rst
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.Stats.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdReducedGraphs.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.Torsions.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MACCSkeys.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.inchi.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Randomize.rst
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.Descriptors.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.DistFunctions.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EnumerateStereoisomers.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SDSupply.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Features.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.TopNContainer.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Composite.AdjustComposite.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.FindQuantBounds.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdmolfiles.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.SaltRemover.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.BitEnsemble.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Recap.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.KNNClassificationModel.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.fileutils.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Features.ShowFeats.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.cactvs.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMMPA.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.PeriodicTable.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.BulkTester.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.BitEnsembleDb.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Scaffolds.MurckoScaffold.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.RDLogger.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatFinderCLI.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.SimilarityScreener.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.NaiveBayes.CrossValidate.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemicalFeatures.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/modules.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Suppliers.DbMolSupplier.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.Node.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.Filter.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.ModelPackage.Packager.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Dbase.DbResultSet.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.SimilarityMaps.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.qtCanvas.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FragmentMatcher.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.Murtagh.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.PropertyMol.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.CrossValidate.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Descriptors3D.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdDistGeom.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.BitClusterer.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.aggCanvas.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.BuildQuantTree.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdSLNParse.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.Quantize.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.SigFactory.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.SATIS.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.EnrichPlot.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.TemplateExpand.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolKey.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EnumerateHeterocycles.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.AtomPairs.Pairs.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.DataUtils.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmilesSupply.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.CrossValidate.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Data.Transforms.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdChemicalFeatures.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Composite.Composite.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.IPythonConsole.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.ScreenComposite.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.SLT.Risk.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.SLT.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fraggle.FraggleSim.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolKey.InchiInfo.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.SimpleEnum.Enumerator.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.SimDivFilters.SimilarityPickers.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.BuildFragmentCatalog.rst
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.EState.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Descriptors.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.EState.Fingerprinter.rst
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.Loader.rst
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Cluster.rst
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.MolSimilarity.rst
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.FeatMaps.FeatMapParser.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.entropy.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdRGroupDecomposition.rst
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.Forest.rst
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolInterchange.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Avalon.pyAvalonTools.rst
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Draw.canvasbase.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.KNN.KNNRegressionModel.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdfiltercatalog.rst
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Fingerprints.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Numerics.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.files.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm3D.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolSurf.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.Neural.NetNode.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.LazyGenerator.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.BitUtils.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.InfoTheory.BitRank.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Subshape.testCombined.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm3D.Pharmacophore.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.utils.comhack.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdMolHash.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.Suppliers.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.RDPaths.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdSubstructLibrary.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.fmcs.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.MolDb.Loader_orig.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.ChemUtils.AlignDepict.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.Chem.PyMol.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.VLib.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/source/rdkit.ML.BuildComposite.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/Cartridge.md
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/RDKit_Book.rst
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Book/GettingStartedInC++.md
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Analysis/ForceField/ForceFieldTerms.new.odt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Docs/Analysis/ForceField/UFF Parameters.ods
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/Fastcluster
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/centroid.tsv
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/clustered.tsv
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/testdata
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/testdata/cdk2.sdf
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/testdata/converted.smi
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/testdata/sdf2smi.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/clustered_parse.tsv
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/fastcluster.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/fp.tsv
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/README.md
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/Fastcluster/cdk2.smi
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/MolVS
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/MolVS/molvs_cli.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/IFG
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/IFG/README
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/IFG/ifg.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/CMakeLists.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/Glare
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/Glare/glare.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/Glare/README.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/SA_Score
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/SA_Score/README
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/SA_Score/sascorer.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/SA_Score/data
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/SA_Score/data/zim.100.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/SA_Score/UnitTestSAScore.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/SA_Score/fpscores.pkl.gz
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/ChiralPairs
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/ChiralPairs/ChiralDescriptors.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/ChiralPairs/README.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/ConformerParser
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/CMakeLists.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/Wrap
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/Wrap/CMakeLists.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/Wrap/rdConformerParser.cpp
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/Wrap/test_list.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/Wrap/testConformerParser.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/ConformerParser.cpp
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/ConformerParser.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/test_list.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/ConformerParser/test.cpp
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/fraggle
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/fraggle/data
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/fraggle/data/fragmentation_tversky_out
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/fraggle/data/final_fraggle_results.csv
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/fraggle/data/query_fragmentation.csv
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/fraggle/data/query.smi
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/fraggle/data/ChEMBL_11265_actives.smi
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/fraggle/cxn_tversky.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/fraggle/atomcontrib.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/fraggle/fraggle.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/fraggle/rdkit_tversky.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/fraggle/readme.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/AtomAtomSimilarity
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/AtomAtomSimilarity/AtomAtomPathSimilarity.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/RxnRoleAssignment
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/RxnRoleAssignment/identifyReactants.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/RxnRoleAssignment/utils.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/RxnRoleAssignment/__init__.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/RxnRoleAssignment/README.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/mol_transform.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/test_rfrag.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_smirks_mol_trans.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/simple.smi
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_input_trans_smarts.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_mmps_default.csv
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_mmps_sym.csv
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_transfroms.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample.smi
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_search_subs_smart_output.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_search_trans_output.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_input_trans.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_search_subs_output.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_fragmented.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_smiles_mol_trans.smi
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_mmps_maxheavy.csv
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_input_subs_smarts.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_input_subs.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_input_smi.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_mmps_sym_maxheavy.csv
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_search_trans_smarts_output.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_smirks.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_cansmirks.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_mmps_maxratio.csv
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_mol_trans_output.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/data/sample_db_search_smi_output.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/indexing.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/cansmirk.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/rfrag.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/create_mmp_db.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/test_list.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/search_mmp_db.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/mmpa/README.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/NP_Score
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/NP_Score/README
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/NP_Score/npscorer.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/NP_Score/publicnp.model.gz
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/PBF
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/PBF/README
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/PBF/testData
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/PBF/testData/egfr.out
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/PBF/testData/egfr.sdf
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/PBF/PBFRDKit.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/PBF/demo.cpp
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/PBF/PBFRDKit.cpp
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/PBF/Makefile
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/PBF/pbf.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/LEF
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/LEF/ClusterFps.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/LEF/CreateFps.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/LEF/DistancePredict.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/LEF/DistancePlot.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/LEF/AddLabels.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/LEF/README.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/M_Kossner
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/M_Kossner/README
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/M_Kossner/Frames.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/M_Kossner/BaseFeatures_DIP2_NoMicrospecies.fdef
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/pzc
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/pzc/p_con.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/pzc/readme.md
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Contrib/pzc/p_con.html
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects/DbCLI
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/README
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr/Compounds.sqlt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr/loadErrors.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr/AtomPairs.sqlt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr/Fingerprints.sqlt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr/Descriptors.sqlt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr_q1.mol
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr.smi
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr.sdf
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/bzr.2.smi
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects/DbCLI/testData/pubchem.200.sdf
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects/DbCLI/TestDbCLI.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects/DbCLI/moe_like.dsc
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects/DbCLI/SearchDb.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Projects/DbCLI/CreateDb.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Scripts
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Scripts/create_deb_packages.sh
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Scripts/README.md
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Scripts/FeatFinderCLI.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/Scripts/PythonFormat.py
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/README
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/share/RDKit/license.txt
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitRDGeneral.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitRDGeneral.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitRDGeneral.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/Exceptions.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/BadFileException.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/BoostStartInclude.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/BoostEndInclude.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/Dict.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/FileParseException.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/Invariant.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/RDAny.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/RDValue.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/RDValue-doublemagic.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/RDValue-taggedunion.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/RDLog.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/RDProps.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/RDThreads.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/StreamOps.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/types.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/utils.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/versions.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/RDConfig.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/LocaleSwitcher.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/Ranking.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/hanoiSort.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/export.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/test.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/hash/hash
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/hash/hash/extensions.hpp
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/hash/hash/hash.hpp
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/hash/hash/detail
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/hash/hash/detail/hash_float.hpp
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/hash/hash/detail/float_functions.hpp
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDGeneral/hash/hash/hash_fwd.hpp
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitRDBoost.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitRDBoost.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitRDBoost.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDBoost/Wrap.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDBoost/PySequenceHolder.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDBoost/list_indexing_suite.hpp
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDBoost/python.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDBoost/boost_numpy.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/RDBoost/python_streambuf.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/rdBase.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitDataStructs.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitDataStructs.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitDataStructs.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DataStructs/base64.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DataStructs/BitOps.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DataStructs/BitVect.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DataStructs/BitVects.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DataStructs/BitVectUtils.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DataStructs/DatastructsException.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DataStructs/DiscreteDistMat.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DataStructs/DiscreteValueVect.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DataStructs/ExplicitBitVect.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DataStructs/SparseBitVect.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DataStructs/SparseIntVect.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DataStructs/FPBReader.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DataStructs/MultiFPBReader.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/DataStructs/cDataStructs.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitRDGeometryLib.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitRDGeometryLib.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitRDGeometryLib.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Geometry/Grid3D.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Geometry/GridUtils.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Geometry/point.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Geometry/Transform2D.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Geometry/Transform3D.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Geometry/Transform.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Geometry/UniformGrid3D.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Geometry/Utils.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Geometry/rdGeometry.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Numerics/Matrix.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Numerics/SquareMatrix.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Numerics/SymmMatrix.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Numerics/Vector.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitAlignment.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitAlignment.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitAlignment.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Numerics/Alignment/AlignPoints.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Numerics/rdAlignment.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitEigenSolvers.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitEigenSolvers.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitEigenSolvers.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Numerics/EigenSolvers/PowerEigenSolver.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitOptimizer.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitOptimizer.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitOptimizer.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Numerics/Optimizer/BFGSOpt.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitForceField.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitForceField.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitForceField.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/Contrib.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/ForceField.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/UFF/AngleBend.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/UFF/BondStretch.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/UFF/Contribs.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/UFF/DistanceConstraint.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/UFF/AngleConstraint.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/UFF/TorsionConstraint.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/UFF/PositionConstraint.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/UFF/Nonbonded.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/UFF/Params.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/UFF/Inversion.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/UFF/TorsionAngle.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/MMFF/AngleBend.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/MMFF/BondStretch.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/MMFF/StretchBend.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/MMFF/OopBend.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/MMFF/TorsionAngle.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/MMFF/Nonbonded.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/MMFF/Contribs.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/MMFF/DistanceConstraint.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/MMFF/AngleConstraint.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/MMFF/TorsionConstraint.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/MMFF/PositionConstraint.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ForceField/MMFF/Params.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ForceField/rdForceField.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitDistGeometry.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitDistGeometry.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitDistGeometry.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DistGeom/BoundsMatrix.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DistGeom/ChiralSet.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DistGeom/ChiralViolationContrib.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DistGeom/DistGeomUtils.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DistGeom/DistViolationContrib.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DistGeom/FourthDimContrib.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DistGeom/TriangleSmooth.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/DistanceGeometry/DistGeom.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitCatalogs.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitCatalogs.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitCatalogs.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Catalogs/CatalogEntry.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Catalogs/Catalog.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Catalogs/CatalogParams.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitGraphMol.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitGraphMol.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitGraphMol.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Atom.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/atomic_data.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/AtomIterators.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Bond.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/BondIterators.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Canon.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Chirality.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Conformer.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/details.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/GraphMol.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolOps.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolPickler.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/PeriodicTable.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/QueryAtom.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/QueryBond.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/QueryOps.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/RDKitBase.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/RDKitQueries.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Resonance.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/RingInfo.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Rings.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ROMol.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/RWMol.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/SanitException.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/StereoGroup.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MonomerInfo.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/new_canon.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolBundle.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitDepictor.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitDepictor.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitDepictor.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Depictor/DepictUtils.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Depictor/EmbeddedFrag.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Depictor/RDDepictor.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdDepictor.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitSmilesParse.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitSmilesParse.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitSmilesParse.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/SmilesParse/primes.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/SmilesParse/SmartsWrite.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/SmilesParse/SmilesParse.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/SmilesParse/SmilesParseOps.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/SmilesParse/SmilesWrite.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitFileParsers.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitFileParsers.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitFileParsers.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/FileParsers.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/FileParserUtils.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/MolFileStereochem.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/MolSupplier.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/MolWriters.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/SequenceParsers.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FileParsers/SequenceWriters.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitSubstructMatch.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitSubstructMatch.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitSubstructMatch.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Substruct/SubstructMatch.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Substruct/SubstructUtils.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitChemReactions.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitChemReactions.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitChemReactions.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/Reaction.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/ReactionParser.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/ReactionPickler.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/ReactionFingerprints.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/ReactionUtils.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/ReactionRunner.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/PreprocessRxn.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/SanitizeRxn.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/Enumerate.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/EnumerateBase.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/EnumerationPickler.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/EnumerationStrategyBase.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/CartesianProduct.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/RandomSample.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ChemReactions/RandomSampleAllBBs.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdChemReactions.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitChemTransforms.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitChemTransforms.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitChemTransforms.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ChemTransforms/ChemTransforms.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ChemTransforms/MolFragmenter.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitSubgraphs.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitSubgraphs.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitSubgraphs.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Subgraphs/Subgraphs.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Subgraphs/SubgraphUtils.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitFilterCatalog.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitFilterCatalog.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitFilterCatalog.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FilterCatalog/FilterCatalogEntry.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FilterCatalog/FilterCatalog.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FilterCatalog/FilterMatcherBase.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FilterCatalog/FilterMatchers.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FilterCatalog/FunctionalGroupHierarchy.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdfiltercatalog.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitFragCatalog.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitFragCatalog.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitFragCatalog.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FragCatalog/FragCatalogEntry.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FragCatalog/FragCatalogUtils.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FragCatalog/FragCatGenerator.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FragCatalog/FragCatParams.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FragCatalog/FragFPGenerator.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdfragcatalog.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitDescriptors.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitDescriptors.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitDescriptors.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/Crippen.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/Lipinski.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/MolDescriptors.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/MolSurf.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/ConnectivityDescriptors.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/MQN.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/RegisterDescriptor.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/Property.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/AUTOCORR2D.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/Data3Ddescriptors.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/MolData3Ddescriptors.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Descriptors/USRDescriptor.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolDescriptors.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitFingerprints.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitFingerprints.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitFingerprints.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/AtomPairs.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/Fingerprints.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/MorganFingerprints.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/MACCS.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/FingerprintGenerator.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/AtomPairGenerator.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/MorganGenerator.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/RDKitFPGenerator.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/TopologicalTorsionGenerator.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Fingerprints/FingerprintUtil.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdFingerprintGenerator.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitPartialCharges.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitPartialCharges.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitPartialCharges.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/PartialCharges/GasteigerCharges.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/PartialCharges/GasteigerParams.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdPartialCharges.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolTransforms.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolTransforms.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolTransforms.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolTransforms/MolTransforms.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolTransforms.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitForceFieldHelpers.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitForceFieldHelpers.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitForceFieldHelpers.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/UFF/AtomTyper.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/UFF/Builder.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/UFF/UFF.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/MMFF/AtomTyper.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/MMFF/Builder.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/MMFF/MMFF.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/CrystalFF/TorsionAngleM6.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ForceFieldHelpers/CrystalFF/TorsionPreferences.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdForceFieldHelpers.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitDistGeomHelpers.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitDistGeomHelpers.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitDistGeomHelpers.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/DistGeomHelpers/Embedder.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdDistGeom.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolAlign.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolAlign.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolAlign.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolAlign/AlignMolecules.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolAlign/O3AAlignMolecules.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolAlign.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolChemicalFeatures.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolChemicalFeatures.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolChemicalFeatures.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolChemicalFeatures/FeatureParser.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolChemicalFeatures/MolChemicalFeatureFactory.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolChemicalFeatures/MolChemicalFeature.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolChemicalFeatures.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitShapeHelpers.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitShapeHelpers.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitShapeHelpers.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ShapeHelpers/ShapeEncoder.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ShapeHelpers/ShapeUtils.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdShapeHelpers.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolCatalog.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolCatalog.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolCatalog.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolCatalog/MolCatalogEntry.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolCatalog/MolCatalog.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolCatalog/MolCatalogParams.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolCatalog.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2D.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2DSVG.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2Dwx.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2DUtils.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolDraw2D/MolDraw2DDetails.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolDraw2D.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolDraw2D.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolDraw2D.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/Draw/rdMolDraw2D.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitFMCS.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitFMCS.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitFMCS.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FMCS/FMCS.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FMCS/Graph.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FMCS/Seed.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FMCS/SeedSet.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FMCS/MatchTable.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FMCS/RingMatchTableSet.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FMCS/SubstructureCache.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FMCS/SubstructMatchCustom.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/FMCS/MaximumCommonSubgraph.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdFMCS.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolHash.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolHash.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolHash.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolHash/MolHash.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolHash.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMMPA.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMMPA.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMMPA.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MMPA/MMPA.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMMPA.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitStructChecker.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitStructChecker.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitStructChecker.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/StructChecker/StructChecker.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/StructChecker/Utilites.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/StructChecker/Pattern.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/StructChecker/Stereo.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/StructChecker/StripSmallFragments.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/StructChecker/ReCharge.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/StructChecker/Tautomer.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdStructChecker.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitReducedGraphs.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitReducedGraphs.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitReducedGraphs.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/ReducedGraphs/ReducedGraphs.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdReducedGraphs.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitTrajectory.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitTrajectory.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitTrajectory.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Trajectory/Snapshot.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/Trajectory/Trajectory.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitSubstructLibrary.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitSubstructLibrary.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitSubstructLibrary.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/SubstructLibrary/SubstructLibrary.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdSubstructLibrary.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitRGroupDecomposition.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitRGroupDecomposition.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitRGroupDecomposition.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/RGroupDecomposition/RGroupDecomp.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdRGroupDecomposition.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitSLNParse.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitSLNParse.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitSLNParse.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/SLNParse/SLNAttribs.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/SLNParse/SLNParse.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/SLNParse/SLNParseOps.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdSLNParse.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdchem.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdmolops.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdqueries.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdmolfiles.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdtrajectory.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolStandardize.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolStandardize.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitMolStandardize.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/MolStandardize.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Metal.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Normalize.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Validate.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Charge.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Tautomer.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/Fragment.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/FragmentCatalogEntry.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/FragmentCatalogParams.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/FragmentCatalogUtils.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/AcidBaseCatalogEntry.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/AcidBaseCatalogParams.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/AcidBaseCatalogUtils.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TransformCatalogEntry.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TransformCatalogParams.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TransformCatalogUtils.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TautomerCatalogEntry.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TautomerCatalogParams.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/GraphMol/MolStandardize/TautomerCatalogUtils.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/MolStandardize/rdMolStandardize.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Query/AndQuery.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Query/EqualityQuery.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Query/GreaterEqualQuery.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Query/GreaterQuery.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Query/LessEqualQuery.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Query/LessQuery.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Query/OrQuery.h
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Query/QueryObjects.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Query/RangeQuery.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Query/SetQuery.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Query/XOrQuery.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/Features/Feature.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/DataManip/MetricMatrixCalc/MetricFuncs.h
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/DataManip/Metric/rdMetricMatrixCalc.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitSimDivPickers.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitSimDivPickers.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitSimDivPickers.so
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-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/SimDivPickers/HierarchicalClusterPicker.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/SimDivPickers/MaxMinPicker.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/SimDivFilters/rdSimDivPickers.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKithc.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKithc.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKithc.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Cluster/Clustering.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitInfoTheory.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitInfoTheory.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitInfoTheory.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/InfoTheory/rdInfoTheory.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/ML/Data/cQuantize.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitChemicalFeatures.so.1.2018.09.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitChemicalFeatures.so.1
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/libRDKitChemicalFeatures.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ChemicalFeatures/ChemicalFeature.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/include/rdkit/ChemicalFeatures/FreeChemicalFeature.h
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/Chem/rdChemicalFeatures.so
-- Installing: /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/tmp/usr/lib/python2.7/dist-packages/rdkit/RDPaths.py
make[1]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/obj-arm-linux-gnueabihf'
   debian/rules override_dh_install
make[1]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg'
dh_numpy
dh_install --list-missing
dh_install: Please use dh_missing --list-missing/--fail-missing instead
dh_install: This feature will be removed in compat 12.
dh_missing: usr/share/RDKit/license.txt exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/README exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/RD.css exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Images/logo_plain.inkscape.svg exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Images/logo.png exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Images/logo.ai exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Images/logo.inkscape.svg exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Images/logo_plain.png exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Images/logo.lrg.png exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Images/wiki/morganfp_atomenv1.png exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Code/CodingStandards.md exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Code/EnhancedStereo.md exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Code/Chem/Pharm2D.signatures.ai exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Code/Chem/Pharm2D.triangles.jpg exists in debian/tmp but is not installed to anywhere
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dh_missing: usr/share/RDKit/Docs/Code/Chem/Pharm2D.triangles.ai exists in debian/tmp but is not installed to anywhere
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dh_missing: usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_and2_expand.png exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_trans_base.png exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Code/images/enhanced_stereo_and1_and2_base.png exists in debian/tmp but is not installed to anywhere
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dh_missing: usr/share/RDKit/Docs/Code/images/enhanced_stereo_abs_or_base.png exists in debian/tmp but is not installed to anywhere
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dh_missing: usr/share/RDKit/Docs/Book/Cartridge.md exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Book/RDKit_Book.rst exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Book/GettingStartedInC++.md exists in debian/tmp but is not installed to anywhere
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dh_missing: usr/share/RDKit/Docs/Book/api-docs.rst exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Book/conf.py exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Book/index.rst exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Book/Makefile exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Book/Install.md exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Book/GettingStartedInPython.rst exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Book/BackwardsIncompatibleChanges.md exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.DecTree.rst exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm3D.ExcludedVolume.rst exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Book/source/rdkit.VLib.NodeLib.SmilesDupeFilter.rst exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.LazySignature.rst exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Book/source/rdkit.DataManip.rst exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Book/source/rdkit.Chem.GraphDescriptors.rst exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Book/source/rdkit.DataStructs.HierarchyVis.rst exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.TreeVis.rst exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Book/source/rdkit.utils.chemdraw_qax.rst exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Book/source/rdkit.ML.DecTree.BuildSigTree.rst exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Book/source/rdkit.Chem.Pharm2D.Generate.rst exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdDepictor.rst exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Book/source/rdkit.Chem.rdchem.rst exists in debian/tmp but is not installed to anywhere
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dh_missing: usr/share/RDKit/Docs/Analysis/ForceField/ForceFieldTerms.new.odt exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Docs/Analysis/ForceField/UFF Parameters.ods exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Scripts/create_deb_packages.sh exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Scripts/README.md exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Scripts/FeatFinderCLI.py exists in debian/tmp but is not installed to anywhere
dh_missing: usr/share/RDKit/Scripts/PythonFormat.py exists in debian/tmp but is not installed to anywhere
dh_missing: usr/lib/cmake/rdkit/rdkit-targets-none.cmake exists in debian/tmp but is not installed to anywhere
dh_missing: usr/lib/cmake/rdkit/rdkit-config.cmake exists in debian/tmp but is not installed to anywhere
dh_missing: usr/lib/cmake/rdkit/rdkit-config-version.cmake exists in debian/tmp but is not installed to anywhere
dh_missing: usr/lib/cmake/rdkit/rdkit-targets.cmake exists in debian/tmp but is not installed to anywhere
	The following debhelper tools have reported what they installed (with files per package)
	 * dh_install: librdkit-dev (46), librdkit1 (90), postgresql-11-rdkit (0), python-rdkit (1), rdkit-data (3), rdkit-doc (0)
	If the missing files are installed by another tool, please file a bug against it.
	When filing the report, if the tool is not part of debhelper itself, please reference the
	"Logging helpers and dh_missing" section from the "PROGRAMMING" guide for debhelper (10.6.3+).
	  (in the debhelper package: /usr/share/doc/debhelper/PROGRAMMING.gz)
	Be sure to test with dpkg-buildpackage -A/-B as the results may vary when only a subset is built
	For a short-term work-around: Add the files to debian/not-installed
mkdir -p /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/rdkit-doc/usr/share/doc/rdkit/
cp /<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/_build/latex/RDKit.pdf /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/rdkit-doc/usr/share/doc/rdkit/
cp -a /<<BUILDDIR>>/rdkit-201809.1+dfsg/Docs/Book/_build/html /<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/rdkit-doc/usr/share/doc/rdkit/
pg_buildext install /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit build-%v postgresql-%v-rdkit
supported-versions: WARNING! Unknown distribution: raspbian
debian found in ID_LIKE, treating as Debian
### install 11 ###
make[2]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/build-11'
/bin/mkdir -p '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib'
/bin/mkdir -p '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/share/postgresql/11/extension'
/bin/mkdir -p '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/share/postgresql/11/extension'
/usr/bin/install -c -m 755  rdkit.so '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib/rdkit.so'
/usr/bin/install -c -m 644 /<<BUILDDIR>>/rdkit-201809.1+dfsg/Code/PgSQL/rdkit/rdkit.control '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/share/postgresql/11/extension/'
/usr/bin/install -c -m 644  rdkit--3.7.sql '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/share/postgresql/11/extension/'
/bin/mkdir -p '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib/bitcode/rdkit'
/bin/mkdir -p '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib/bitcode'/rdkit/
/usr/bin/install -c -m 644 rdkit_io.bc '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 mol_op.bc '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 bfp_op.bc '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 sfp_op.bc '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 rxn_op.bc '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 rdkit_gist.bc '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 bfp_gist.bc '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 bfp_gin.bc '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 low_gist.bc '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 guc.bc '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 cache.bc '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 adapter.bc '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib/bitcode'/rdkit/./
/usr/bin/install -c -m 644 bitstring.bc '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib/bitcode'/rdkit/./
cd '/<<BUILDDIR>>/rdkit-201809.1+dfsg/debian/postgresql-11-rdkit/usr/lib/postgresql/11/lib/bitcode' && /usr/lib/llvm-7/bin/llvm-lto -thinlto -thinlto-action=thinlink -o rdkit.index.bc rdkit/rdkit_io.bc rdkit/mol_op.bc rdkit/bfp_op.bc rdkit/sfp_op.bc rdkit/rxn_op.bc rdkit/rdkit_gist.bc rdkit/bfp_gist.bc rdkit/bfp_gin.bc rdkit/low_gist.bc rdkit/guc.bc rdkit/cache.bc rdkit/adapter.bc rdkit/bitstring.bc
make[2]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg/build-11'
make[1]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg'
   dh_installdocs -a -O--buildsystem=cmake -O--parallel
   debian/rules override_dh_installchangelogs
make[1]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg'
dh_installchangelogs ReleaseNotes.md
make[1]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg'
   debian/rules override_dh_python2
make[1]: Entering directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg'
dh_python2 -ppython-rdkit
I: dh_python2 fs:329: renaming rdBase.so to rdBase.arm-linux-gnueabihf.so
/usr/share/dh-python/dh_python2:67: DeprecationWarning: The 'warn' method is deprecated, use 'warning' instead
  'libpython%s: %s', so_version, fn)
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdBase.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming cDataStructs.so to cDataStructs.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: cDataStructs.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming DistGeom.so to DistGeom.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: DistGeom.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdAlignment.so to rdAlignment.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdAlignment.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdSimDivPickers.so to rdSimDivPickers.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdSimDivPickers.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdGeometry.so to rdGeometry.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdGeometry.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdChemReactions.so to rdChemReactions.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdChemReactions.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdChemicalFeatures.so to rdChemicalFeatures.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdChemicalFeatures.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdDepictor.so to rdDepictor.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdDepictor.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdDistGeom.so to rdDistGeom.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdDistGeom.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdFMCS.so to rdFMCS.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdFMCS.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdFingerprintGenerator.so to rdFingerprintGenerator.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdFingerprintGenerator.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdForceFieldHelpers.so to rdForceFieldHelpers.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdForceFieldHelpers.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdMMPA.so to rdMMPA.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdMMPA.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdMolAlign.so to rdMolAlign.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdMolAlign.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdMolCatalog.so to rdMolCatalog.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdMolCatalog.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdMolChemicalFeatures.so to rdMolChemicalFeatures.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdMolChemicalFeatures.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdMolDescriptors.so to rdMolDescriptors.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdMolDescriptors.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdMolHash.so to rdMolHash.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdMolHash.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdMolTransforms.so to rdMolTransforms.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdMolTransforms.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdPartialCharges.so to rdPartialCharges.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdPartialCharges.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdRGroupDecomposition.so to rdRGroupDecomposition.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdRGroupDecomposition.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdReducedGraphs.so to rdReducedGraphs.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdReducedGraphs.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdSLNParse.so to rdSLNParse.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdSLNParse.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdShapeHelpers.so to rdShapeHelpers.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdShapeHelpers.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdStructChecker.so to rdStructChecker.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdStructChecker.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdSubstructLibrary.so to rdSubstructLibrary.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdSubstructLibrary.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdchem.so to rdchem.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdchem.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdfiltercatalog.so to rdfiltercatalog.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdfiltercatalog.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdfragcatalog.so to rdfragcatalog.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdfragcatalog.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdmolfiles.so to rdmolfiles.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdmolfiles.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdmolops.so to rdmolops.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdmolops.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdqueries.so to rdqueries.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdqueries.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdtrajectory.so to rdtrajectory.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdtrajectory.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdMolStandardize.so to rdMolStandardize.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdMolStandardize.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdMolDraw2D.so to rdMolDraw2D.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdMolDraw2D.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdForceField.so to rdForceField.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdForceField.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdMetricMatrixCalc.so to rdMetricMatrixCalc.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdMetricMatrixCalc.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming cQuantize.so to cQuantize.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: cQuantize.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming Clustering.so to Clustering.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: Clustering.arm-linux-gnueabihf.so
I: dh_python2 fs:329: renaming rdInfoTheory.so to rdInfoTheory.arm-linux-gnueabihf.so
W: dh_python2 dh_python2:67: public extension linked with libpython2.7: rdInfoTheory.arm-linux-gnueabihf.so
dh_numpy -ppython-rdkit
make[1]: Leaving directory '/<<BUILDDIR>>/rdkit-201809.1+dfsg'
   dh_installinit -a -O--buildsystem=cmake -O--parallel
   dh_lintian -a -O--buildsystem=cmake -O--parallel
   dh_perl -a -O--buildsystem=cmake -O--parallel
   dh_link -a -O--buildsystem=cmake -O--parallel
   dh_strip_nondeterminism -a -O--buildsystem=cmake -O--parallel
   dh_compress -a -O--buildsystem=cmake -O--parallel
   dh_fixperms -a -O--buildsystem=cmake -O--parallel
   dh_missing -a -O--buildsystem=cmake -O--parallel
   dh_strip -a -O--buildsystem=cmake -O--parallel
   dh_makeshlibs -a -O--buildsystem=cmake -O--parallel
   dh_shlibdeps -a -O--buildsystem=cmake -O--parallel
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitForceField.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitRDBoost.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitChemicalFeatures.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitRDGeneral.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitDepictor.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitInfoTheory.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitStructChecker.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolChemicalFeatures.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitForceFieldHelpers.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitShapeHelpers.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitCatalogs.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitRGroupDecomposition.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolTransforms.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitFileParsers.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitTrajectory.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitEigenSolvers.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitGraphMol.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitRDGeometryLib.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitDistGeometry.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitSubgraphs.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitFMCS.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitAlignment.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitReducedGraphs.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitSmilesParse.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMMPA.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolDraw2D.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitDataStructs.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitPartialCharges.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolCatalog.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolHash.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitDescriptors.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitFragCatalog.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitSLNParse.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolAlign.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitFilterCatalog.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitOptimizer.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitDistGeomHelpers.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitFingerprints.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitChemTransforms.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitSimDivPickers.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitMolStandardize.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitSubstructLibrary.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitSubstructMatch.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: symbol __aeabi_atexit@CXXABI_ARM_1.3.3 used by debian/librdkit1/usr/lib/libRDKitChemReactions.so.1.2018.09.1 found in none of the libraries
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/librdkit1/usr/lib/libRDKitForceField.so.1.2018.09.1 debian/librdkit1/usr/lib/libRDKitForceFieldHelpers.so.1.2018.09.1 debian/librdkit1/usr/lib/libRDKitDistGeometry.so.1.2018.09.1 debian/librdkit1/usr/lib/libRDKitMolAlign.so.1.2018.09.1 debian/librdkit1/usr/lib/libRDKitDistGeomHelpers.so.1.2018.09.1 were not linked against libRDKitOptimizer.so.1 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/librdkit1/usr/lib/libRDKitForceField.so.1.2018.09.1 debian/librdkit1/usr/lib/libRDKitForceFieldHelpers.so.1.2018.09.1 debian/librdkit1/usr/lib/libRDKitDistGeometry.so.1.2018.09.1 debian/librdkit1/usr/lib/libRDKitMolAlign.so.1.2018.09.1 debian/librdkit1/usr/lib/libRDKitOptimizer.so.1.2018.09.1 debian/librdkit1/usr/lib/libRDKitDistGeomHelpers.so.1.2018.09.1 were not linked against libRDKitTrajectory.so.1 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolDescriptors.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/DistanceGeometry/DistGeom.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/Draw/rdMolDraw2D.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdmolops.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdChemReactions.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdStructChecker.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolTransforms.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolHash.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdShapeHelpers.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdDistGeom.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolAlign.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/MolStandardize/rdMolStandardize.arm-linux-gnueabihf.so were not linked against libRDKitEigenSolvers.so.1 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/ForceField/rdForceField.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/DistanceGeometry/DistGeom.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdForceFieldHelpers.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdDistGeom.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolAlign.arm-linux-gnueabihf.so were not linked against libRDKitOptimizer.so.1 (they use none of the library's symbols)
dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdSubstructLibrary.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/ForceField/rdForceField.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/rdBase.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolDescriptors.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/DistanceGeometry/DistGeom.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/DataStructs/cDataStructs.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdPartialCharges.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdFingerprintGenerator.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/Draw/rdMolDraw2D.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdfragcatalog.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdRGroupDecomposition.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdfiltercatalog.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdmolops.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdForceFieldHelpers.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/ML/Cluster/Clustering.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolCatalog.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdChemReactions.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdchem.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/ML/InfoTheory/rdInfoTheory.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdStructChecker.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolTransforms.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolChemicalFeatures.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdqueries.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdtrajectory.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolHash.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/SimDivFilters/rdSimDivPickers.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdShapeHelpers.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/ML/Data/cQuantize.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdDistGeom.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Numerics/rdAlignment.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdSLNParse.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdDepictor.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Geometry/rdGeometry.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMolAlign.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/MolStandardize/rdMolStandardize.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdReducedGraphs.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdmolfiles.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdChemicalFeatures.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdFMCS.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/Chem/rdMMPA.arm-linux-gnueabihf.so debian/python-rdkit/usr/lib/python2.7/dist-packages/rdkit/DataManip/Metric/rdMetricMatrixCalc.arm-linux-gnueabihf.so were not linked against libboost_serialization.so.1.67.0 (they use none of the library's symbols)
   dh_installdeb -a -O--buildsystem=cmake -O--parallel
   dh_gencontrol -a -O--buildsystem=cmake -O--parallel
dpkg-gencontrol: warning: Depends field of package librdkit-dev: substitution variable ${shlibs:Depends} used, but is not defined
dpkg-gencontrol: warning: package postgresql-11-rdkit: substitution variable ${python:Depends} unused, but is defined
dpkg-gencontrol: warning: package librdkit1: substitution variable ${python:Depends} unused, but is defined
dpkg-gencontrol: warning: package librdkit-dev: substitution variable ${python:Depends} unused, but is defined
dpkg-gencontrol: warning: package postgresql-11-rdkit: substitution variable ${python:Depends} unused, but is defined
dpkg-gencontrol: warning: package librdkit1: substitution variable ${python:Depends} unused, but is defined
   dh_md5sums -a -O--buildsystem=cmake -O--parallel
   dh_builddeb -a -O--buildsystem=cmake -O--parallel
dpkg-deb: building package 'librdkit1' in '../librdkit1_201809.1+dfsg-3_armhf.deb'.
dpkg-deb: building package 'python-rdkit' in '../python-rdkit_201809.1+dfsg-3_armhf.deb'.
dpkg-deb: building package 'postgresql-11-rdkit-dbgsym' in '../postgresql-11-rdkit-dbgsym_201809.1+dfsg-3_armhf.deb'.
dpkg-deb: building package 'librdkit-dev' in '../librdkit-dev_201809.1+dfsg-3_armhf.deb'.
dpkg-deb: building package 'postgresql-11-rdkit' in '../postgresql-11-rdkit_201809.1+dfsg-3_armhf.deb'.
dpkg-deb: building package 'librdkit1-dbgsym' in '../librdkit1-dbgsym_201809.1+dfsg-3_armhf.deb'.
dpkg-deb: building package 'python-rdkit-dbgsym' in '../python-rdkit-dbgsym_201809.1+dfsg-3_armhf.deb'.
 dpkg-genbuildinfo --build=any
 dpkg-genchanges --build=any -mRaspbian mythic lxc autobuilder 1 <root@raspbian.org> >../rdkit_201809.1+dfsg-3_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
 dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2019-01-14T09:07:53Z

Finished
--------

I: Built successfully

+------------------------------------------------------------------------------+
| Post Build Chroot                                                            |
+------------------------------------------------------------------------------+


+------------------------------------------------------------------------------+
| Changes                                                                      |
+------------------------------------------------------------------------------+


rdkit_201809.1+dfsg-3_armhf.changes:
------------------------------------

Format: 1.8
Date: Wed, 09 Jan 2019 10:58:57 +0100
Source: rdkit
Binary: python-rdkit rdkit-doc rdkit-data librdkit1 librdkit-dev postgresql-11-rdkit
Architecture: armhf
Version: 201809.1+dfsg-3
Distribution: buster-staging
Urgency: medium
Maintainer: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Changed-By: Michael Banck <mbanck@debian.org>
Description:
 librdkit-dev - Collection of cheminformatics and machine-learning software (deve
 librdkit1  - Collection of cheminformatics and machine-learning software (shar
 postgresql-11-rdkit - Cheminformatics and machine-learning software (PostgreSQL Cartrid
 python-rdkit - Collection of cheminformatics and machine-learning software
 rdkit-data - Collection of cheminformatics and machine-learning software (data
 rdkit-doc  - Collection of cheminformatics and machine-learning software (docu
Closes: 881562
Changes:
 rdkit (201809.1+dfsg-3) unstable; urgency=medium
 .
   * debian/control.in (Build-Depends): Removed python-epydoc (Closes: #881562).
   * debian/control: Regenerated.
Checksums-Sha1:
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 6b75e3b9010c80dfd8c2d993f612617d35616d3d 66843112 librdkit1-dbgsym_201809.1+dfsg-3_armhf.deb
 e30b7babbddb83f12d47bcdd540e145b68334d5e 2221228 librdkit1_201809.1+dfsg-3_armhf.deb
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Checksums-Sha256:
 4601d89f6850a295a4bc824b979cbd381a4f475b82345134068ca3e9f7d9fb6a 295504 librdkit-dev_201809.1+dfsg-3_armhf.deb
 f8e114d72a0fcd1390846c99733d0f720f214f9ffc51dbc64ad8939b1d3268f9 66843112 librdkit1-dbgsym_201809.1+dfsg-3_armhf.deb
 590c37e666f8f72f3195c0a13b80ac8e9ecd71ae927dcddf0fc13556e94ec40a 2221228 librdkit1_201809.1+dfsg-3_armhf.deb
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Files:
 28611c231ffca8e38a4e4c0c6a4491bc 295504 libdevel optional librdkit-dev_201809.1+dfsg-3_armhf.deb
 305b848151f33261e23500bcd458c8f8 66843112 debug optional librdkit1-dbgsym_201809.1+dfsg-3_armhf.deb
 618f57010022498ee19297dde76348e9 2221228 libs optional librdkit1_201809.1+dfsg-3_armhf.deb
 833a1c8a6fce76a9e2c7a620d3d243f2 935452 debug optional postgresql-11-rdkit-dbgsym_201809.1+dfsg-3_armhf.deb
 844272092f670cabe2b89c3de09039ac 385000 database optional postgresql-11-rdkit_201809.1+dfsg-3_armhf.deb
 f7b429a872dc3a39117cb4fe40e76563 46203096 debug optional python-rdkit-dbgsym_201809.1+dfsg-3_armhf.deb
 d477cd32150611b373b626da6096ab5a 2581248 python optional python-rdkit_201809.1+dfsg-3_armhf.deb
 cda4cf785214c6d8a32589c8e52b13be 16322 science optional rdkit_201809.1+dfsg-3_armhf.buildinfo

+------------------------------------------------------------------------------+
| Package contents                                                             |
+------------------------------------------------------------------------------+


librdkit-dev_201809.1+dfsg-3_armhf.deb
--------------------------------------

 new Debian package, version 2.0.
 size 295504 bytes: control archive=8708 bytes.
    1512 bytes,    37 lines      control              
   24332 bytes,   291 lines      md5sums              
 Package: librdkit-dev
 Source: rdkit
 Version: 201809.1+dfsg-3
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 1783
 Depends: librdkit1 (= 201809.1+dfsg-3)
 Section: libdevel
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Collection of cheminformatics and machine-learning software (development files)
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.  Features Include:
  .
   * Chemical reaction handling and transforms
   * Substructure searching with SMARTS
   * Canonical SMILES
   * Molecule-molecule alignment
   * Large number of molecular descriptors, including topological,
     compositional, EState, SlogP/SMR, VSA and Feature-map vectors
   * Fragmentation using RECAP rules
   * 2D coordinate generation and depiction, including constrained depiction
   * 3D coordinate generation using geometry embedding
   * UFF and MMFF94 forcefields
   * Chirality support, including calculation of (R/S) stereochemistry codes
   * 2D pharmacophore searching
   * Fingerprinting, including Daylight-like, atom pairs, topological
     torsions, Morgan algorithm and MACCS keys
   * Calculation of shape similarity
   * Multi-molecule maximum common substructure
   * Machine-learning via clustering and information theory algorithms
   * Gasteiger-Marsili partial charge calculation
  .
  File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit
  binary format.
  .
  This package contains the header files.

drwxr-xr-x root/root         0 2019-01-09 09:58 ./
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/include/
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/include/rdkit/
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/include/rdkit/Catalogs/
-rw-r--r-- root/root     16620 2018-10-22 02:29 ./usr/include/rdkit/Catalogs/Catalog.h
-rw-r--r-- root/root      1361 2018-10-22 02:29 ./usr/include/rdkit/Catalogs/CatalogEntry.h
-rw-r--r-- root/root      1221 2018-10-22 02:29 ./usr/include/rdkit/Catalogs/CatalogParams.h
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/include/rdkit/ChemicalFeatures/
-rw-r--r-- root/root      1021 2018-10-22 02:29 ./usr/include/rdkit/ChemicalFeatures/ChemicalFeature.h
-rw-r--r-- root/root      2814 2018-10-22 02:29 ./usr/include/rdkit/ChemicalFeatures/FreeChemicalFeature.h
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/include/rdkit/DataManip/
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/include/rdkit/DataManip/MetricMatrixCalc/
-rw-r--r-- root/root      1841 2018-10-22 02:29 ./usr/include/rdkit/DataManip/MetricMatrixCalc/MetricFuncs.h
-rw-r--r-- root/root      3506 2018-10-22 02:29 ./usr/include/rdkit/DataManip/MetricMatrixCalc/MetricMatrixCalc.h
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/include/rdkit/DataStructs/
-rw-r--r-- root/root     10600 2018-10-22 02:29 ./usr/include/rdkit/DataStructs/BitOps.h
-rw-r--r-- root/root      2509 2018-10-22 02:29 ./usr/include/rdkit/DataStructs/BitVect.h
-rw-r--r-- root/root      1115 2018-10-22 02:29 ./usr/include/rdkit/DataStructs/BitVectUtils.h
-rw-r--r-- root/root       584 2018-10-22 02:29 ./usr/include/rdkit/DataStructs/BitVects.h
-rw-r--r-- root/root       841 2018-10-22 02:29 ./usr/include/rdkit/DataStructs/DatastructsException.h
-rw-r--r-- root/root       844 2018-10-22 02:29 ./usr/include/rdkit/DataStructs/DiscreteDistMat.h
-rw-r--r-- root/root      4414 2018-10-22 02:29 ./usr/include/rdkit/DataStructs/DiscreteValueVect.h
-rw-r--r-- root/root      3242 2018-10-22 02:29 ./usr/include/rdkit/DataStructs/ExplicitBitVect.h
-rw-r--r-- root/root      9603 2018-10-22 02:29 ./usr/include/rdkit/DataStructs/FPBReader.h
-rw-r--r-- root/root      7646 2018-10-22 02:29 ./usr/include/rdkit/DataStructs/MultiFPBReader.h
-rw-r--r-- root/root      3013 2018-10-22 02:29 ./usr/include/rdkit/DataStructs/SparseBitVect.h
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drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/include/rdkit/RDBoost/
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drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/include/rdkit/RDGeneral/
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drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/include/rdkit/RDGeneral/hash/
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/include/rdkit/RDGeneral/hash/hash/
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/include/rdkit/RDGeneral/hash/hash/detail/
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drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/include/rdkit/SimDivPickers/
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drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/lib/
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitAlignment.so -> libRDKitAlignment.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitCatalogs.so -> libRDKitCatalogs.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitChemReactions.so -> libRDKitChemReactions.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitChemTransforms.so -> libRDKitChemTransforms.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitChemicalFeatures.so -> libRDKitChemicalFeatures.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitDataStructs.so -> libRDKitDataStructs.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitDepictor.so -> libRDKitDepictor.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitDescriptors.so -> libRDKitDescriptors.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitDistGeomHelpers.so -> libRDKitDistGeomHelpers.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitDistGeometry.so -> libRDKitDistGeometry.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitEigenSolvers.so -> libRDKitEigenSolvers.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitFMCS.so -> libRDKitFMCS.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitFileParsers.so -> libRDKitFileParsers.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitFilterCatalog.so -> libRDKitFilterCatalog.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitFingerprints.so -> libRDKitFingerprints.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitForceField.so -> libRDKitForceField.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitForceFieldHelpers.so -> libRDKitForceFieldHelpers.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitFragCatalog.so -> libRDKitFragCatalog.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitGraphMol.so -> libRDKitGraphMol.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitInfoTheory.so -> libRDKitInfoTheory.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitMMPA.so -> libRDKitMMPA.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitMolAlign.so -> libRDKitMolAlign.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitMolCatalog.so -> libRDKitMolCatalog.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitMolChemicalFeatures.so -> libRDKitMolChemicalFeatures.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitMolDraw2D.so -> libRDKitMolDraw2D.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitMolHash.so -> libRDKitMolHash.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitMolStandardize.so -> libRDKitMolStandardize.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitMolTransforms.so -> libRDKitMolTransforms.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitOptimizer.so -> libRDKitOptimizer.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitPartialCharges.so -> libRDKitPartialCharges.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitRDBoost.so -> libRDKitRDBoost.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitRDGeneral.so -> libRDKitRDGeneral.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitRDGeometryLib.so -> libRDKitRDGeometryLib.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitRGroupDecomposition.so -> libRDKitRGroupDecomposition.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitReducedGraphs.so -> libRDKitReducedGraphs.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitSLNParse.so -> libRDKitSLNParse.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitShapeHelpers.so -> libRDKitShapeHelpers.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitSimDivPickers.so -> libRDKitSimDivPickers.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitSmilesParse.so -> libRDKitSmilesParse.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitStructChecker.so -> libRDKitStructChecker.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitSubgraphs.so -> libRDKitSubgraphs.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitSubstructLibrary.so -> libRDKitSubstructLibrary.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitSubstructMatch.so -> libRDKitSubstructMatch.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitTrajectory.so -> libRDKitTrajectory.so.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKithc.so -> libRDKithc.so.1
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/share/
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/share/doc/
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/share/doc/librdkit-dev/
-rw-r--r-- root/root      3597 2019-01-09 09:58 ./usr/share/doc/librdkit-dev/changelog.Debian.gz
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-rw-r--r-- root/root      6729 2019-01-09 09:04 ./usr/share/doc/librdkit-dev/copyright


librdkit1-dbgsym_201809.1+dfsg-3_armhf.deb
------------------------------------------

 new Debian package, version 2.0.
 size 66843112 bytes: control archive=2568 bytes.
    2178 bytes,    12 lines      control              
    4770 bytes,    45 lines      md5sums              
 Package: librdkit1-dbgsym
 Source: rdkit
 Version: 201809.1+dfsg-3
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 68424
 Depends: librdkit1 (= 201809.1+dfsg-3)
 Section: debug
 Priority: optional
 Description: debug symbols for librdkit1
 Build-Ids: 02fd52f67f93db8f13895055f952301679da17cb 07396b21a73d313828fd2e2701a2f013b394e972 0a47520ffc750e63c712e38018ab45dfa7ac61b0 109ace45c51849b09925919a140a70ffde43da69 1da3a144a0cfde40d9c7cf6f329fdbae693db684 1e33d87cc81360539c751434cc22cf62f9f44a4e 2035d2c6a29e4a43abc1a6afd5a9f34c47b8359b 38994e7649fe92818ff99db85e00c6eccf85f835 3c1ac93bac4302b086e0f8a58b971fc40f3a0406 403d71666ba65731dfb510ca2464d174a7fcdd21 421e86a9cc97aab69d02d8e67787f3ed529e2c02 4349695877cc00c1a65d664f01a77a81eb08585c 459eb4d74166ce9218f3e388bb1f63f87a6e0008 45a190716665e985a3f3e3b6042454a63e4df116 467082ea06a5d5465e9e0664f0dbf48eecbad349 4f07c3d933f733d5e4831da7178877bb1738f008 51f27c43f731e9cb808b22cb6604c9271706e7cc 56e39662725c6aa58947dc53e12ebd98fe5ee17c 592002f35e48a881a8078f26d81579ae7b32a3b3 5ad51e853c1dd2c683f15e20435ca32a4da19bcc 5fb78fe306af95f79009f3d475063df574a4f63d 650268a710ec55f8dcac4b9bca44407bbd31bc0c 6f9bfde036314e7edd1129fdd562866e19120b11 763ad5d54cadc820d7d5b8b6154268b744315339 7bc4c2851665278faad0af49bd9029c1cce5a6e8 7c03fb066fc5fbd41717defccf7a299b285fe12a 7c9551780e5c812224031df7e141a1e6588e52ac 7cecc591ebf9d9c702f595662d7982948f3f8b0a 8252967e2406a10b2ebc7b2a2276ffcd29b69516 86195718773c7ccc63676cc8c96bc6d0ed76633a 871f0755cbc5aa4c10d0979aa2a130c6691f5f22 9d363e5124b6444de28910b9806451be82319266 a73ae6b3037d4302d6c371b11abe7713fc323cfd a89f8c2b33d50b436b49907c11ec2007a1fd4d4a bc2d8f122868dbcedefa20bbde6cf2c2f7d8ab5a ce5e6e390720bfb754d8864caa46a7c026799690 d68f4430eeedc92a264e03fe393bc9739f5dc3a7 da1de33d9eb7f9f2991d8717405e2acdec117b73 da6e74e76c734f69f50dc74f34756b8d76860a0c dbfc58f85794874429ce21154bcf505cc2618820 dd9e30504c1b714d50231d8a5b69aa4731323984 e42ab78939fbaefeba3636dc7af381abfbb7f35f f700faa4f5361ac3aa50d63f11e3f28da424f8ac f9f6dc27c2d8729cb4a46a1daeb19511d013539b fc8a8e2161fc4037e71b04888dca90580c865c48

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librdkit1_201809.1+dfsg-3_armhf.deb
-----------------------------------

 new Debian package, version 2.0.
 size 2221228 bytes: control archive=2812 bytes.
    1608 bytes,    37 lines      control              
    3760 bytes,    49 lines      md5sums              
    1446 bytes,    45 lines      shlibs               
      63 bytes,     2 lines      triggers             
 Package: librdkit1
 Source: rdkit
 Version: 201809.1+dfsg-3
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 9821
 Depends: libboost-python1.67.0, libboost-serialization1.67.0, libc6 (>= 2.4), libgcc1 (>= 1:3.5), libpython2.7 (>= 2.7), libstdc++6 (>= 7)
 Section: libs
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Collection of cheminformatics and machine-learning software (shared libraries)
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.  Features Include:
  .
   * Chemical reaction handling and transforms
   * Substructure searching with SMARTS
   * Canonical SMILES
   * Molecule-molecule alignment
   * Large number of molecular descriptors, including topological,
     compositional, EState, SlogP/SMR, VSA and Feature-map vectors
   * Fragmentation using RECAP rules
   * 2D coordinate generation and depiction, including constrained depiction
   * 3D coordinate generation using geometry embedding
   * UFF and MMFF94 forcefields
   * Chirality support, including calculation of (R/S) stereochemistry codes
   * 2D pharmacophore searching
   * Fingerprinting, including Daylight-like, atom pairs, topological
     torsions, Morgan algorithm and MACCS keys
   * Calculation of shape similarity
   * Multi-molecule maximum common substructure
   * Machine-learning via clustering and information theory algorithms
   * Gasteiger-Marsili partial charge calculation
  .
  File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit
  binary format.
  .
  This package contains the shared libraries.

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lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitFMCS.so.1 -> libRDKitFMCS.so.1.2018.09.1
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lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitFilterCatalog.so.1 -> libRDKitFilterCatalog.so.1.2018.09.1
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lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitGraphMol.so.1 -> libRDKitGraphMol.so.1.2018.09.1
-rw-r--r-- root/root   1193932 2019-01-09 09:58 ./usr/lib/libRDKitGraphMol.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitInfoTheory.so.1 -> libRDKitInfoTheory.so.1.2018.09.1
-rw-r--r-- root/root     34624 2019-01-09 09:58 ./usr/lib/libRDKitInfoTheory.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitMMPA.so.1 -> libRDKitMMPA.so.1.2018.09.1
-rw-r--r-- root/root     63420 2019-01-09 09:58 ./usr/lib/libRDKitMMPA.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitMolAlign.so.1 -> libRDKitMolAlign.so.1.2018.09.1
-rw-r--r-- root/root    166384 2019-01-09 09:58 ./usr/lib/libRDKitMolAlign.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitMolCatalog.so.1 -> libRDKitMolCatalog.so.1.2018.09.1
-rw-r--r-- root/root     34544 2019-01-09 09:58 ./usr/lib/libRDKitMolCatalog.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitMolChemicalFeatures.so.1 -> libRDKitMolChemicalFeatures.so.1.2018.09.1
-rw-r--r-- root/root    112868 2019-01-09 09:58 ./usr/lib/libRDKitMolChemicalFeatures.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitMolDraw2D.so.1 -> libRDKitMolDraw2D.so.1.2018.09.1
-rw-r--r-- root/root    339488 2019-01-09 09:58 ./usr/lib/libRDKitMolDraw2D.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitMolHash.so.1 -> libRDKitMolHash.so.1.2018.09.1
-rw-r--r-- root/root     96328 2019-01-09 09:58 ./usr/lib/libRDKitMolHash.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitMolStandardize.so.1 -> libRDKitMolStandardize.so.1.2018.09.1
-rw-r--r-- root/root    396220 2019-01-09 09:58 ./usr/lib/libRDKitMolStandardize.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitMolTransforms.so.1 -> libRDKitMolTransforms.so.1.2018.09.1
-rw-r--r-- root/root     63340 2019-01-09 09:58 ./usr/lib/libRDKitMolTransforms.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitOptimizer.so.1 -> libRDKitOptimizer.so.1.2018.09.1
-rw-r--r-- root/root      5432 2019-01-09 09:58 ./usr/lib/libRDKitOptimizer.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitPartialCharges.so.1 -> libRDKitPartialCharges.so.1.2018.09.1
-rw-r--r-- root/root     63448 2019-01-09 09:58 ./usr/lib/libRDKitPartialCharges.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitRDBoost.so.1 -> libRDKitRDBoost.so.1.2018.09.1
-rw-r--r-- root/root      9712 2019-01-09 09:58 ./usr/lib/libRDKitRDBoost.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitRDGeneral.so.1 -> libRDKitRDGeneral.so.1.2018.09.1
-rw-r--r-- root/root     84296 2019-01-09 09:58 ./usr/lib/libRDKitRDGeneral.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitRDGeometryLib.so.1 -> libRDKitRDGeometryLib.so.1.2018.09.1
-rw-r--r-- root/root    104480 2019-01-09 09:58 ./usr/lib/libRDKitRDGeometryLib.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitRGroupDecomposition.so.1 -> libRDKitRGroupDecomposition.so.1.2018.09.1
-rw-r--r-- root/root    129440 2019-01-09 09:58 ./usr/lib/libRDKitRGroupDecomposition.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitReducedGraphs.so.1 -> libRDKitReducedGraphs.so.1.2018.09.1
-rw-r--r-- root/root     63448 2019-01-09 09:58 ./usr/lib/libRDKitReducedGraphs.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitSLNParse.so.1 -> libRDKitSLNParse.so.1.2018.09.1
-rw-r--r-- root/root    299084 2019-01-09 09:58 ./usr/lib/libRDKitSLNParse.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitShapeHelpers.so.1 -> libRDKitShapeHelpers.so.1.2018.09.1
-rw-r--r-- root/root     22192 2019-01-09 09:58 ./usr/lib/libRDKitShapeHelpers.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitSimDivPickers.so.1 -> libRDKitSimDivPickers.so.1.2018.09.1
-rw-r--r-- root/root     22140 2019-01-09 09:58 ./usr/lib/libRDKitSimDivPickers.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitSmilesParse.so.1 -> libRDKitSmilesParse.so.1.2018.09.1
-rw-r--r-- root/root    446144 2019-01-09 09:58 ./usr/lib/libRDKitSmilesParse.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitStructChecker.so.1 -> libRDKitStructChecker.so.1.2018.09.1
-rw-r--r-- root/root    336256 2019-01-09 09:58 ./usr/lib/libRDKitStructChecker.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitSubgraphs.so.1 -> libRDKitSubgraphs.so.1.2018.09.1
-rw-r--r-- root/root     63500 2019-01-09 09:58 ./usr/lib/libRDKitSubgraphs.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitSubstructLibrary.so.1 -> libRDKitSubstructLibrary.so.1.2018.09.1
-rw-r--r-- root/root     83944 2019-01-09 09:58 ./usr/lib/libRDKitSubstructLibrary.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitSubstructMatch.so.1 -> libRDKitSubstructMatch.so.1.2018.09.1
-rw-r--r-- root/root    133644 2019-01-09 09:58 ./usr/lib/libRDKitSubstructMatch.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKitTrajectory.so.1 -> libRDKitTrajectory.so.1.2018.09.1
-rw-r--r-- root/root     63388 2019-01-09 09:58 ./usr/lib/libRDKitTrajectory.so.1.2018.09.1
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/lib/libRDKithc.so.1 -> libRDKithc.so.1.2018.09.1
-rw-r--r-- root/root      9480 2019-01-09 09:58 ./usr/lib/libRDKithc.so.1.2018.09.1
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/share/
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/share/doc/
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/share/doc/librdkit1/
-rw-r--r-- root/root      3597 2019-01-09 09:58 ./usr/share/doc/librdkit1/changelog.Debian.gz
-rw-r--r-- root/root     57914 2018-10-22 02:29 ./usr/share/doc/librdkit1/changelog.gz
-rw-r--r-- root/root      6729 2019-01-09 09:04 ./usr/share/doc/librdkit1/copyright
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/share/lintian/
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/share/lintian/overrides/
-rw-r--r-- root/root       107 2019-01-09 09:04 ./usr/share/lintian/overrides/librdkit1


postgresql-11-rdkit-dbgsym_201809.1+dfsg-3_armhf.deb
----------------------------------------------------

 new Debian package, version 2.0.
 size 935452 bytes: control archive=548 bytes.
     403 bytes,    12 lines      control              
     106 bytes,     1 lines      md5sums              
 Package: postgresql-11-rdkit-dbgsym
 Source: rdkit
 Version: 201809.1+dfsg-3
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 1003
 Depends: postgresql-11-rdkit (= 201809.1+dfsg-3)
 Section: debug
 Priority: optional
 Description: debug symbols for postgresql-11-rdkit
 Build-Ids: b104042b2c0382fc5e4d8df33fa2d1d9ddf5f225

drwxr-xr-x root/root         0 2019-01-09 09:58 ./
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/lib/
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/lib/debug/
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/lib/debug/.build-id/b1/
-rw-r--r-- root/root   1016048 2019-01-09 09:58 ./usr/lib/debug/.build-id/b1/04042b2c0382fc5e4d8df33fa2d1d9ddf5f225.debug
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/share/
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/share/doc/
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/share/doc/postgresql-11-rdkit-dbgsym -> postgresql-11-rdkit


postgresql-11-rdkit_201809.1+dfsg-3_armhf.deb
---------------------------------------------

 new Debian package, version 2.0.
 size 385000 bytes: control archive=1692 bytes.
    1567 bytes,    37 lines      control              
    1667 bytes,    20 lines      md5sums              
 Package: postgresql-11-rdkit
 Source: rdkit
 Version: 201809.1+dfsg-3
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 899
 Depends: libc6 (>= 2.4), libgcc1 (>= 1:3.5), librdkit1, libstdc++6 (>= 5.2), postgresql-11
 Section: database
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Cheminformatics and machine-learning software (PostgreSQL Cartridge)
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.  Features Include:
  .
   * Chemical reaction handling and transforms
   * Substructure searching with SMARTS
   * Canonical SMILES
   * Molecule-molecule alignment
   * Large number of molecular descriptors, including topological,
     compositional, EState, SlogP/SMR, VSA and Feature-map vectors
   * Fragmentation using RECAP rules
   * 2D coordinate generation and depiction, including constrained depiction
   * 3D coordinate generation using geometry embedding
   * UFF and MMFF94 forcefields
   * Chirality support, including calculation of (R/S) stereochemistry codes
   * 2D pharmacophore searching
   * Fingerprinting, including Daylight-like, atom pairs, topological
     torsions, Morgan algorithm and MACCS keys
   * Calculation of shape similarity
   * Multi-molecule maximum common substructure
   * Machine-learning via clustering and information theory algorithms
   * Gasteiger-Marsili partial charge calculation
  .
  File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit
  binary format.
  .
  This package contains the PostgreSQL extension.

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drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/lib/
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/lib/postgresql/
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/lib/postgresql/11/
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/lib/postgresql/11/lib/
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/lib/postgresql/11/lib/bitcode/
-rw-r--r-- root/root     35516 2019-01-09 09:58 ./usr/lib/postgresql/11/lib/bitcode/rdkit.index.bc
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/lib/postgresql/11/lib/bitcode/rdkit/
-rw-r--r-- root/root    349312 2019-01-09 09:58 ./usr/lib/postgresql/11/lib/bitcode/rdkit/adapter.bc
-rw-r--r-- root/root      6760 2019-01-09 09:58 ./usr/lib/postgresql/11/lib/bitcode/rdkit/bfp_gin.bc
-rw-r--r-- root/root     15460 2019-01-09 09:58 ./usr/lib/postgresql/11/lib/bitcode/rdkit/bfp_gist.bc
-rw-r--r-- root/root     16832 2019-01-09 09:58 ./usr/lib/postgresql/11/lib/bitcode/rdkit/bfp_op.bc
-rw-r--r-- root/root      8028 2019-01-09 09:58 ./usr/lib/postgresql/11/lib/bitcode/rdkit/bitstring.bc
-rw-r--r-- root/root     14896 2019-01-09 09:58 ./usr/lib/postgresql/11/lib/bitcode/rdkit/cache.bc
-rw-r--r-- root/root     14404 2019-01-09 09:58 ./usr/lib/postgresql/11/lib/bitcode/rdkit/guc.bc
-rw-r--r-- root/root     12852 2019-01-09 09:58 ./usr/lib/postgresql/11/lib/bitcode/rdkit/low_gist.bc
-rw-r--r-- root/root     35632 2019-01-09 09:58 ./usr/lib/postgresql/11/lib/bitcode/rdkit/mol_op.bc
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-rw-r--r-- root/root     20260 2019-01-09 09:58 ./usr/lib/postgresql/11/lib/bitcode/rdkit/rdkit_io.bc
-rw-r--r-- root/root     10012 2019-01-09 09:58 ./usr/lib/postgresql/11/lib/bitcode/rdkit/rxn_op.bc
-rw-r--r-- root/root     14720 2019-01-09 09:58 ./usr/lib/postgresql/11/lib/bitcode/rdkit/sfp_op.bc
-rw-r--r-- root/root    210444 2019-01-09 09:58 ./usr/lib/postgresql/11/lib/rdkit.so
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/share/
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/share/doc/
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/share/doc/postgresql-11-rdkit/
-rw-r--r-- root/root      3597 2019-01-09 09:58 ./usr/share/doc/postgresql-11-rdkit/changelog.Debian.gz
-rw-r--r-- root/root     57914 2018-10-22 02:29 ./usr/share/doc/postgresql-11-rdkit/changelog.gz
-rw-r--r-- root/root      6729 2019-01-09 09:04 ./usr/share/doc/postgresql-11-rdkit/copyright
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/share/postgresql/
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/share/postgresql/11/
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/share/postgresql/11/extension/
-rw-r--r-- root/root     43838 2019-01-09 09:58 ./usr/share/postgresql/11/extension/rdkit--3.7.sql
-rw-r--r-- root/root       135 2019-01-09 09:58 ./usr/share/postgresql/11/extension/rdkit.control


python-rdkit-dbgsym_201809.1+dfsg-3_armhf.deb
---------------------------------------------

 new Debian package, version 2.0.
 size 46203096 bytes: control archive=2396 bytes.
    2043 bytes,    13 lines      control              
    4346 bytes,    41 lines      md5sums              
 Package: python-rdkit-dbgsym
 Source: rdkit
 Version: 201809.1+dfsg-3
 Auto-Built-Package: debug-symbols
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 51410
 Depends: python-rdkit (= 201809.1+dfsg-3)
 Section: debug
 Priority: optional
 Description: debug symbols for python-rdkit
 Build-Ids: 0751aaed71f15a09d6f4b073789deeb55b7cf389 082587471c4e378790a6b09b1027a3bcee9bc97d 0a06ed94d6bb7b5b7b362553945ac9e5afe2f1fe 0c4591efa3e6166364211f680faecb4098ba10e5 15f07eebfb71624904ba1325480edd28cd22fe24 27251cd18668504c210d8b183e8cb4c2d5a16279 2a90b247aaed938b2c66216a94f7a33d1b4f69a5 3c7d3d54cec8cc6d60b8e69771fe2e323e766008 442bae11694879d41b40e173975a7a667b8588e8 50075c9e988ca62d472da05d32139e5afcb27a41 53439ab5472914dd734b033ab5f972defc16916c 536f036133580de0e3a01684717085058f0cd908 5e33b60bafbee480580fd0c90827ae23492f296b 6157b9445f4f480829646191216b00920b0bb8e4 65302622c8a70a1a7d717d1369cd1d7af439efbc 654a2380ba33c5be0190ad68ef8df66b6bead5b5 6f09e3fd6618fbb84b1e0563e4b286f8f28cfd00 77d99868372bf6207c2591abc1dccc64105d5e46 7acda392fdcd64c4139a45c7b6649e1b0f9cffda 8405e5ba6b6f1cdd5aa29ae29d88d28635dfa316 8868a4f1fa564bee0360b219ec7ae62d8a5c768e 88f5511c2863058e7d0c1a6df3556c0ad3d25eaf 8997cfc726e58e444fa783a800a8214680879cc2 8d9fb672308f2aaac1739dc423f684219d662457 9073a36bec55f706606c2c71e031fe1032385884 926b2e0ef395dab0164b7e13aec0c993c3f285bb a00ff154ee063688f84104bc66d7781596154282 a722b51d5806f8f47a96cd77c8b733ce8d13ba0b b558442ca6cd08476cf1cc1352cbe49388f70c58 b5fb96e49e614899644ced9f0413f80840efc9e7 d14f15e0067486c07672cf902e503d1a1ebe1f81 d8e30a92d3db9e9a126c7d5ddca5d5ccfc310cd9 d9dd6beb91283c5532cf77dd2ceff17fb4d94b63 e5a3cc76b0961fab6ef9c1877ce4380a556b6946 edb7d4b5f82a4436737056fb1fb6f8a370035b17 f6c8b80c99bfb656fdab07e5bba72ba2fd9da3a9 f78668419fba3fa0e316eeb8d1f52d5699c57b6c f8bc8f0fc72318f1f230b44c4a123b72507ad296 f9e88659ecafe388e45701163faa74228ea7ccd5 f9fc9277c4a0d9d8014fb1884799e21d5eb231ae fc0e7ac0b2704b7b073576fc32785d1befb143c9
 Python-Version: 2.7

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lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/share/doc/python-rdkit-dbgsym -> python-rdkit


python-rdkit_201809.1+dfsg-3_armhf.deb
--------------------------------------

 new Debian package, version 2.0.
 size 2581248 bytes: control archive=12404 bytes.
    1785 bytes,    38 lines      control              
   45014 bytes,   451 lines      md5sums              
     162 bytes,     9 lines   *  postinst             #!/bin/sh
     263 bytes,    14 lines   *  prerm                #!/bin/sh
 Package: python-rdkit
 Source: rdkit
 Version: 201809.1+dfsg-3
 Architecture: armhf
 Maintainer: Debichem Team <debichem-devel@lists.alioth.debian.org>
 Installed-Size: 14760
 Depends: fonts-freefont-ttf, rdkit-data, python (<< 2.8), python (>= 2.7~), python-numpy (>= 1:1.16.0~rc1), python-numpy-abi9, python:any (<< 2.8), python:any (>= 2.7~), libboost-python1.67.0, libboost-serialization1.67.0, libc6 (>= 2.4), libgcc1 (>= 1:3.5), libpython2.7 (>= 2.7), librdkit1, libstdc++6 (>= 6)
 Suggests: rdkit-doc
 Provides: python2.7-rdkit
 Section: python
 Priority: optional
 Homepage: http://www.rdkit.org
 Description: Collection of cheminformatics and machine-learning software
  RDKit is a Python/C++ based cheminformatics and machine-learning software
  environment.  Features Include:
  .
   * Chemical reaction handling and transforms
   * Substructure searching with SMARTS
   * Canonical SMILES
   * Molecule-molecule alignment
   * Large number of molecular descriptors, including topological,
     compositional, EState, SlogP/SMR, VSA and Feature-map vectors
   * Fragmentation using RECAP rules
   * 2D coordinate generation and depiction, including constrained depiction
   * 3D coordinate generation using geometry embedding
   * UFF and MMFF94 forcefields
   * Chirality support, including calculation of (R/S) stereochemistry codes
   * 2D pharmacophore searching
   * Fingerprinting, including Daylight-like, atom pairs, topological
     torsions, Morgan algorithm and MACCS keys
   * Calculation of shape similarity
   * Multi-molecule maximum common substructure
   * Machine-learning via clustering and information theory algorithms
   * Gasteiger-Marsili partial charge calculation
  .
  File formats RDKit supports include MDL Mol, PDB, SDF, TDT, SMILES and RDKit
  binary format.
 Python-Version: 2.7

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drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/share/
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/share/doc/
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/share/doc/python-rdkit/
-rw-r--r-- root/root       225 2019-01-09 09:04 ./usr/share/doc/python-rdkit/TODO.Debian
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-rw-r--r-- root/root      6729 2019-01-09 09:04 ./usr/share/doc/python-rdkit/copyright
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/share/pyshared/
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/share/pyshared/rdkit/
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/share/pyshared/rdkit/Chem/
drwxr-xr-x root/root         0 2019-01-09 09:58 ./usr/share/pyshared/rdkit/Chem/Draw/
lrwxrwxrwx root/root         0 2019-01-09 09:58 ./usr/share/pyshared/rdkit/Chem/Draw/FreeSans.ttf -> ../../../../fonts/truetype/freefont/FreeSans.ttf


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| Post Build                                                                   |
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| Cleanup                                                                      |
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Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use

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| Summary                                                                      |
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Build Architecture: armhf
Build-Space: 2703116
Build-Time: 3970
Distribution: buster-staging
Host Architecture: armhf
Install-Time: 1738
Job: rdkit_201809.1+dfsg-3
Machine Architecture: armhf
Package: rdkit
Package-Time: 5739
Source-Version: 201809.1+dfsg-3
Space: 2703116
Status: successful
Version: 201809.1+dfsg-3
--------------------------------------------------------------------------------
Finished at 2019-01-14T09:07:53Z
Build needed 01:35:39, 2703116k disk space
Raspbian Package Auto-Building

Build log for rdkit (201809.1+dfsg-3) on armhf
