r-cran-samr →
3.0-1+b1 →
armhf → 2020-05-31 02:50:08
sbuild (Debian sbuild) 0.72.0 (25 Oct 2016) on mb-lxc-02
+==============================================================================+
| r-cran-samr 3.0-1+b1 (armhf) Sun, 31 May 2020 02:31:31 +0000 |
+==============================================================================+
Package: r-cran-samr
Version: 3.0-1+b1
Source Version: 3.0-1
Distribution: bullseye-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bullseye-staging-armhf-sbuild-f67dae85-401a-4d04-b5b3-2562b51b9d86' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.0.1/private bullseye-staging InRelease [11.3 kB]
Get:2 http://172.17.0.1/private bullseye-staging/main Sources [11.7 MB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf Packages [12.8 MB]
Fetched 24.5 MB in 9s (2607 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'r-cran-samr' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/r-pkg-team/r-cran-samr.git
Please use:
git clone https://salsa.debian.org/r-pkg-team/r-cran-samr.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 3783 kB of source archives.
Get:1 http://172.17.0.1/private bullseye-staging/main r-cran-samr 3.0-1 (dsc) [2098 B]
Get:2 http://172.17.0.1/private bullseye-staging/main r-cran-samr 3.0-1 (tar) [3779 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main r-cran-samr 3.0-1 (diff) [1960 B]
Fetched 3783 kB in 1s (4429 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/r-cran-samr-dK6gfO/r-cran-samr-3.0' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/r-cran-samr-dK6gfO' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-NliMrJ/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-NliMrJ/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-NliMrJ/gpg/trustdb.gpg: trustdb created
gpg: key 37145E60F90AF620: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 37145E60F90AF620: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 37145E60F90AF620: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-NliMrJ/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-NliMrJ/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-NliMrJ/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-NliMrJ/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-NliMrJ/apt_archive ./ Packages [433 B]
Fetched 2109 B in 0s (7897 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
libpam-cap netbase
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 29 not upgraded.
Need to get 848 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-NliMrJ/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [848 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 848 B in 0s (57.1 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12233 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper (>= 11~), dh-r, r-base-dev, r-bioc-impute, r-cran-matrixstats, r-cran-shiny, r-cran-shinyfiles, r-cran-openxlsx, r-cran-gsa
Filtered Build-Depends: debhelper (>= 11~), dh-r, r-base-dev, r-bioc-impute, r-cran-matrixstats, r-cran-shiny, r-cran-shinyfiles, r-cran-openxlsx, r-cran-gsa
dpkg-deb: building package 'sbuild-build-depends-r-cran-samr-dummy' in '/<<BUILDDIR>>/resolver-NliMrJ/apt_archive/sbuild-build-depends-r-cran-samr-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-r-cran-samr-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-NliMrJ/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-NliMrJ/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-NliMrJ/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-NliMrJ/apt_archive ./ Sources [548 B]
Get:5 copy:/<<BUILDDIR>>/resolver-NliMrJ/apt_archive ./ Packages [630 B]
Fetched 2511 B in 0s (9226 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install r-cran-samr build dependencies (apt-based resolver)
-----------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
libpam-cap netbase
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils ca-certificates cpp-9
dctrl-tools debhelper dh-autoreconf dh-r dh-strip-nondeterminism dwz file
fontconfig fontconfig-config fonts-dejavu-core fonts-font-awesome
fonts-glyphicons-halflings g++-9 gcc-10-base gcc-9 gcc-9-base gettext
gettext-base gfortran gfortran-9 groff-base icu-devtools intltool-debian
libarchive-zip-perl libasan5 libatomic1 libblas-dev libblas3 libboost-dev
libboost1.67-dev libbrotli1 libbsd0 libbz2-dev libcairo2 libcc1-0 libcroco3
libcurl4 libdatrie1 libdebhelper-perl libelf1 libexpat1
libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1
libfreetype6 libfribidi0 libgcc-9-dev libgcc-s1 libgfortran-9-dev
libgfortran5 libglib2.0-0 libgomp1 libgraphite2-3 libgssapi-krb5-2
libharfbuzz0b libice6 libicu-dev libicu63 libjbig0 libjpeg-dev
libjpeg62-turbo libjpeg62-turbo-dev libjs-bootstrap libjs-d3 libjs-es5-shim
libjs-highlight.js libjs-jquery libjs-jquery-datatables
libjs-jquery-selectize.js libjs-jquery-ui libjs-json libjs-microplugin.js
libjs-sifter.js libjs-twitter-bootstrap-datepicker libk5crypto3 libkeyutils1
libkrb5-3 libkrb5support0 liblapack-dev liblapack3 liblzma-dev libmagic-mgc
libmagic1 libncurses-dev libncurses5-dev libncurses6 libnghttp2-14
libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils
libpaper1 libpcre16-3 libpcre2-16-0 libpcre2-32-0 libpcre2-dev
libpcre2-posix2 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1
libpixman-1-0 libpng-dev libpng16-16 libpsl5 libreadline-dev librtmp1
libsigsegv2 libsm6 libssh2-1 libssl1.1 libstdc++-9-dev libstdc++6
libsub-override-perl libswitch-perl libtcl8.6 libthai-data libthai0 libtiff5
libtinfo5 libtk8.6 libtool libubsan1 libuchardet0 libuv1 libwebp6 libx11-6
libx11-data libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6
libxft2 libxml2 libxmuu1 libxrender1 libxss1 libxt6 littler m4 man-db
node-html5shiv node-jquery node-normalize.css openssl pkg-config po-debconf
r-base-core r-base-dev r-bioc-biocgenerics r-bioc-impute r-cran-assertthat
r-cran-bh r-cran-cli r-cran-crayon r-cran-digest r-cran-ellipsis
r-cran-fansi r-cran-fastmap r-cran-fs r-cran-glue r-cran-gsa
r-cran-htmltools r-cran-httpuv r-cran-jsonlite r-cran-later r-cran-lifecycle
r-cran-littler r-cran-magrittr r-cran-matrixstats r-cran-mime
r-cran-openxlsx r-cran-pillar r-cran-pkgconfig r-cran-pkgkitten
r-cran-promises r-cran-r6 r-cran-rcpp r-cran-rlang r-cran-shiny
r-cran-shinyfiles r-cran-sourcetools r-cran-stringi r-cran-tibble
r-cran-utf8 r-cran-vctrs r-cran-xtable r-cran-zip sensible-utils ucf unzip
x11-common xauth xdg-utils zip zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois
vacation gcc-9-locales debtags dh-make gcc-9-doc gettext-doc libasprintf-dev
libgettextpo-dev gfortran-doc gfortran-9-doc libcoarrays-dev groff
liblapack-doc libboost-doc libboost1.67-doc libboost-atomic1.67-dev
libboost-chrono1.67-dev libboost-container1.67-dev libboost-context1.67-dev
libboost-contract1.67-dev libboost-coroutine1.67-dev
libboost-date-time1.67-dev libboost-exception1.67-dev libboost-fiber1.67-dev
libboost-filesystem1.67-dev libboost-graph1.67-dev
libboost-graph-parallel1.67-dev libboost-iostreams1.67-dev
libboost-locale1.67-dev libboost-log1.67-dev libboost-math1.67-dev
libboost-mpi1.67-dev libboost-mpi-python1.67-dev libboost-numpy1.67-dev
libboost-program-options1.67-dev libboost-python1.67-dev
libboost-random1.67-dev libboost-regex1.67-dev
libboost-serialization1.67-dev libboost-signals1.67-dev
libboost-stacktrace1.67-dev libboost-system1.67-dev libboost-test1.67-dev
libboost-thread1.67-dev libboost-timer1.67-dev libboost-type-erasure1.67-dev
libboost-wave1.67-dev libboost1.67-tools-dev libmpfrc++-dev libntl-dev
krb5-doc krb5-user icu-doc libjs-jquery-ui-docs liblzma-doc ncurses-doc
readline-doc libstdc++-9-doc tcl8.6 tk8.6 libtool-doc gcj-jdk m4-doc
apparmor less www-browser nodejs libmail-box-perl elpa-ess r-doc-info
| r-doc-pdf r-mathlib r-base-html texlive-base texlive-latex-base
texlive-plain-generic texlive-fonts-recommended texlive-fonts-extra
texlive-extra-utils texlive-latex-recommended texlive-latex-extra texinfo
r-bioc-biobase r-bioc-s4vectors r-bioc-iranges r-bioc-genomicranges
r-bioc-delayedarray r-bioc-biostrings r-bioc-rsamtools r-bioc-annotationdbi
r-bioc-affy r-bioc-deseq2 r-bioc-annotate r-cran-covr r-cran-callr
r-cran-htmlwidgets r-cran-knitr r-cran-rmarkdown r-cran-rstudioapi
r-cran-prettycode r-cran-unitizer r-cran-withr r-cran-dbi r-cran-rsqlite
r-cran-r.utils r-cran-forcats r-cran-stringr r-cran-ggplot2 r-cran-dplyr
r-cran-httr r-cran-curl r-cran-plyr r-cran-getopt r-cran-base64enc
r-cran-testthat r-cran-scales r-cran-inline r-cran-cairo r-cran-markdown
r-cran-yaml r-cran-bit64 r-cran-blob r-cran-evaluate r-cran-hms r-cran-purrr
r-cran-tidyr r-cran-zeallot r-cran-plm r-cran-zoo r-cran-survival
Recommended packages:
devscripts curl | wget | lynx bzip2-doc libarchive-cpio-perl libglib2.0-data
shared-mime-info xdg-user-dirs javascript-common krb5-locales libgpm2
libpng-tools publicsuffix libltdl-dev libmail-sendmail-perl r-recommended
r-doc-html r-cran-runit r-cran-testthat r-cran-withr r-cran-mockery
r-cran-markdown r-cran-curl r-cran-sp r-cran-lubridate r-cran-future
r-cran-rmarkdown r-cran-data.table r-cran-rsqlite r-cran-knitr r-cran-dplyr
r-cran-mockr r-cran-bit64 r-cran-generics r-cran-xml2 libfile-mimeinfo-perl
libnet-dbus-perl libx11-protocol-perl x11-utils x11-xserver-utils
The following packages will be REMOVED:
libgcc1*
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdmainutils ca-certificates
dctrl-tools debhelper dh-autoreconf dh-r dh-strip-nondeterminism dwz file
fontconfig fontconfig-config fonts-dejavu-core fonts-font-awesome
fonts-glyphicons-halflings gettext gettext-base gfortran gfortran-9
groff-base icu-devtools intltool-debian libarchive-zip-perl libblas-dev
libblas3 libboost-dev libboost1.67-dev libbrotli1 libbsd0 libbz2-dev
libcairo2 libcroco3 libcurl4 libdatrie1 libdebhelper-perl libelf1 libexpat1
libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1
libfreetype6 libfribidi0 libgfortran-9-dev libgfortran5 libglib2.0-0
libgraphite2-3 libgssapi-krb5-2 libharfbuzz0b libice6 libicu-dev libicu63
libjbig0 libjpeg-dev libjpeg62-turbo libjpeg62-turbo-dev libjs-bootstrap
libjs-d3 libjs-es5-shim libjs-highlight.js libjs-jquery
libjs-jquery-datatables libjs-jquery-selectize.js libjs-jquery-ui libjs-json
libjs-microplugin.js libjs-sifter.js libjs-twitter-bootstrap-datepicker
libk5crypto3 libkeyutils1 libkrb5-3 libkrb5support0 liblapack-dev liblapack3
liblzma-dev libmagic-mgc libmagic1 libncurses-dev libncurses5-dev
libncurses6 libnghttp2-14 libpango-1.0-0 libpangocairo-1.0-0
libpangoft2-1.0-0 libpaper-utils libpaper1 libpcre16-3 libpcre2-16-0
libpcre2-32-0 libpcre2-dev libpcre2-posix2 libpcre3-dev libpcre32-3
libpcrecpp0v5 libpipeline1 libpixman-1-0 libpng-dev libpng16-16 libpsl5
libreadline-dev librtmp1 libsigsegv2 libsm6 libssh2-1 libssl1.1
libsub-override-perl libswitch-perl libtcl8.6 libthai-data libthai0 libtiff5
libtinfo5 libtk8.6 libtool libuchardet0 libuv1 libwebp6 libx11-6 libx11-data
libxau6 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2
libxml2 libxmuu1 libxrender1 libxss1 libxt6 littler m4 man-db node-html5shiv
node-jquery node-normalize.css openssl pkg-config po-debconf r-base-core
r-base-dev r-bioc-biocgenerics r-bioc-impute r-cran-assertthat r-cran-bh
r-cran-cli r-cran-crayon r-cran-digest r-cran-ellipsis r-cran-fansi
r-cran-fastmap r-cran-fs r-cran-glue r-cran-gsa r-cran-htmltools
r-cran-httpuv r-cran-jsonlite r-cran-later r-cran-lifecycle r-cran-littler
r-cran-magrittr r-cran-matrixstats r-cran-mime r-cran-openxlsx r-cran-pillar
r-cran-pkgconfig r-cran-pkgkitten r-cran-promises r-cran-r6 r-cran-rcpp
r-cran-rlang r-cran-shiny r-cran-shinyfiles r-cran-sourcetools
r-cran-stringi r-cran-tibble r-cran-utf8 r-cran-vctrs r-cran-xtable
r-cran-zip sbuild-build-depends-r-cran-samr-dummy sensible-utils ucf unzip
x11-common xauth xdg-utils zip zlib1g-dev
The following packages will be upgraded:
cpp-9 g++-9 gcc-10-base gcc-9 gcc-9-base libasan5 libatomic1 libcc1-0
libgcc-9-dev libgcc-s1 libgomp1 libstdc++-9-dev libstdc++6 libubsan1
14 upgraded, 192 newly installed, 1 to remove and 15 not upgraded.
Need to get 141 MB of archives.
After this operation, 425 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-NliMrJ/apt_archive ./ sbuild-build-depends-r-cran-samr-dummy 0.invalid.0 [912 B]
Get:2 http://172.17.0.1/private bullseye-staging/main armhf libbsd0 armhf 0.10.0-1 [112 kB]
Get:3 http://172.17.0.1/private bullseye-staging/main armhf libtinfo5 armhf 6.2-1 [318 kB]
Get:4 http://172.17.0.1/private bullseye-staging/main armhf bsdmainutils armhf 11.1.2 [182 kB]
Get:5 http://172.17.0.1/private bullseye-staging/main armhf libatomic1 armhf 10.1.0-2+rpi1 [8172 B]
Get:6 http://172.17.0.1/private bullseye-staging/main armhf libubsan1 armhf 10.1.0-2+rpi1 [115 kB]
Get:7 http://172.17.0.1/private bullseye-staging/main armhf libgomp1 armhf 10.1.0-2+rpi1 [82.9 kB]
Get:8 http://172.17.0.1/private bullseye-staging/main armhf gcc-10-base armhf 10.1.0-2+rpi1 [197 kB]
Get:9 http://172.17.0.1/private bullseye-staging/main armhf libgcc-s1 armhf 10.1.0-2+rpi1 [36.1 kB]
Get:10 http://172.17.0.1/private bullseye-staging/main armhf libcc1-0 armhf 10.1.0-2+rpi1 [31.7 kB]
Get:11 http://172.17.0.1/private bullseye-staging/main armhf libstdc++6 armhf 10.1.0-2+rpi1 [408 kB]
Get:12 http://172.17.0.1/private bullseye-staging/main armhf libuchardet0 armhf 0.0.6-3 [62.2 kB]
Get:13 http://172.17.0.1/private bullseye-staging/main armhf groff-base armhf 1.22.4-5 [783 kB]
Get:14 http://172.17.0.1/private bullseye-staging/main armhf libpipeline1 armhf 1.5.2-2 [29.6 kB]
Get:15 http://172.17.0.1/private bullseye-staging/main armhf man-db armhf 2.9.1-1 [1262 kB]
Get:16 http://172.17.0.1/private bullseye-staging/main armhf node-normalize.css all 8.0.1-3 [12.5 kB]
Get:17 http://172.17.0.1/private bullseye-staging/main armhf g++-9 armhf 9.3.0-13+rpi1 [8225 kB]
Get:18 http://172.17.0.1/private bullseye-staging/main armhf gcc-9 armhf 9.3.0-13+rpi1 [7731 kB]
Get:19 http://172.17.0.1/private bullseye-staging/main armhf cpp-9 armhf 9.3.0-13+rpi1 [7464 kB]
Get:20 http://172.17.0.1/private bullseye-staging/main armhf libasan5 armhf 9.3.0-13+rpi1 [348 kB]
Get:21 http://172.17.0.1/private bullseye-staging/main armhf libstdc++-9-dev armhf 9.3.0-13+rpi1 [1713 kB]
Get:22 http://172.17.0.1/private bullseye-staging/main armhf libgcc-9-dev armhf 9.3.0-13+rpi1 [639 kB]
Get:23 http://172.17.0.1/private bullseye-staging/main armhf gcc-9-base armhf 9.3.0-13+rpi1 [197 kB]
Get:24 http://172.17.0.1/private bullseye-staging/main armhf sensible-utils all 0.0.12+nmu1 [16.0 kB]
Get:25 http://172.17.0.1/private bullseye-staging/main armhf libmagic-mgc armhf 1:5.38-5 [262 kB]
Get:26 http://172.17.0.1/private bullseye-staging/main armhf libmagic1 armhf 1:5.38-5 [113 kB]
Get:27 http://172.17.0.1/private bullseye-staging/main armhf file armhf 1:5.38-5 [67.0 kB]
Get:28 http://172.17.0.1/private bullseye-staging/main armhf gettext-base armhf 0.19.8.1-10 [117 kB]
Get:29 http://172.17.0.1/private bullseye-staging/main armhf libswitch-perl all 2.17-2 [20.5 kB]
Get:30 http://172.17.0.1/private bullseye-staging/main armhf ucf all 3.0042 [73.9 kB]
Get:31 http://172.17.0.1/private bullseye-staging/main armhf libsigsegv2 armhf 2.12-2 [32.3 kB]
Get:32 http://172.17.0.1/private bullseye-staging/main armhf m4 armhf 1.4.18-4 [185 kB]
Get:33 http://172.17.0.1/private bullseye-staging/main armhf autoconf all 2.69-11.1 [341 kB]
Get:34 http://172.17.0.1/private bullseye-staging/main armhf autotools-dev all 20180224.1 [77.0 kB]
Get:35 http://172.17.0.1/private bullseye-staging/main armhf automake all 1:1.16.2-1 [775 kB]
Get:36 http://172.17.0.1/private bullseye-staging/main armhf autopoint all 0.19.8.1-10 [435 kB]
Get:37 http://172.17.0.1/private bullseye-staging/main armhf libssl1.1 armhf 1.1.1g-1 [1272 kB]
Get:38 http://172.17.0.1/private bullseye-staging/main armhf openssl armhf 1.1.1g-1 [811 kB]
Get:39 http://172.17.0.1/private bullseye-staging/main armhf ca-certificates all 20190110 [157 kB]
Get:40 http://172.17.0.1/private bullseye-staging/main armhf dctrl-tools armhf 2.24-3 [94.2 kB]
Get:41 http://172.17.0.1/private bullseye-staging/main armhf libtool all 2.4.6-14 [513 kB]
Get:42 http://172.17.0.1/private bullseye-staging/main armhf dh-autoreconf all 19 [16.9 kB]
Get:43 http://172.17.0.1/private bullseye-staging/main armhf libdebhelper-perl all 13.1 [187 kB]
Get:44 http://172.17.0.1/private bullseye-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:45 http://172.17.0.1/private bullseye-staging/main armhf libsub-override-perl all 0.09-2 [10.2 kB]
Get:46 http://172.17.0.1/private bullseye-staging/main armhf libfile-stripnondeterminism-perl all 1.8.1-1 [25.2 kB]
Get:47 http://172.17.0.1/private bullseye-staging/main armhf dh-strip-nondeterminism all 1.8.1-1 [14.9 kB]
Get:48 http://172.17.0.1/private bullseye-staging/main armhf libelf1 armhf 0.176-1.1 [158 kB]
Get:49 http://172.17.0.1/private bullseye-staging/main armhf dwz armhf 0.13-5 [142 kB]
Get:50 http://172.17.0.1/private bullseye-staging/main armhf libglib2.0-0 armhf 2.64.2-1 [1158 kB]
Get:51 http://172.17.0.1/private bullseye-staging/main armhf libicu63 armhf 63.2-3 [7987 kB]
Get:52 http://172.17.0.1/private bullseye-staging/main armhf libxml2 armhf 2.9.10+dfsg-5 [592 kB]
Get:53 http://172.17.0.1/private bullseye-staging/main armhf libcroco3 armhf 0.6.13-1 [133 kB]
Get:54 http://172.17.0.1/private bullseye-staging/main armhf gettext armhf 0.19.8.1-10 [1219 kB]
Get:55 http://172.17.0.1/private bullseye-staging/main armhf intltool-debian all 0.35.0+20060710.5 [26.8 kB]
Get:56 http://172.17.0.1/private bullseye-staging/main armhf po-debconf all 1.0.21 [248 kB]
Get:57 http://172.17.0.1/private bullseye-staging/main armhf debhelper all 13.1 [1012 kB]
Get:58 http://172.17.0.1/private bullseye-staging/main armhf zip armhf 3.0-11 [212 kB]
Get:59 http://172.17.0.1/private bullseye-staging/main armhf unzip armhf 6.0-25 [152 kB]
Get:60 http://172.17.0.1/private bullseye-staging/main armhf libpaper1 armhf 1.1.28 [20.5 kB]
Get:61 http://172.17.0.1/private bullseye-staging/main armhf libpaper-utils armhf 1.1.28 [17.7 kB]
Get:62 http://172.17.0.1/private bullseye-staging/main armhf xdg-utils all 1.1.3-2 [74.6 kB]
Get:63 http://172.17.0.1/private bullseye-staging/main armhf libblas3 armhf 3.9.0-2 [108 kB]
Get:64 http://172.17.0.1/private bullseye-staging/main armhf libexpat1 armhf 2.2.9-1 [71.5 kB]
Get:65 http://172.17.0.1/private bullseye-staging/main armhf libpng16-16 armhf 1.6.37-2 [274 kB]
Get:66 http://172.17.0.1/private bullseye-staging/main armhf libfreetype6 armhf 2.10.1-2 [330 kB]
Get:67 http://172.17.0.1/private bullseye-staging/main armhf fonts-dejavu-core all 2.37-1 [1068 kB]
Get:68 http://172.17.0.1/private bullseye-staging/main armhf fontconfig-config all 2.13.1-4.2 [281 kB]
Get:69 http://172.17.0.1/private bullseye-staging/main armhf libfontconfig1 armhf 2.13.1-4.2 [328 kB]
Get:70 http://172.17.0.1/private bullseye-staging/main armhf libpixman-1-0 armhf 0.36.0-1 [458 kB]
Get:71 http://172.17.0.1/private bullseye-staging/main armhf libxau6 armhf 1:1.0.8-1+b2 [19.1 kB]
Get:72 http://172.17.0.1/private bullseye-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:73 http://172.17.0.1/private bullseye-staging/main armhf libxcb1 armhf 1.14-2 [135 kB]
Get:74 http://172.17.0.1/private bullseye-staging/main armhf libx11-data all 2:1.6.9-2 [298 kB]
Get:75 http://172.17.0.1/private bullseye-staging/main armhf libx11-6 armhf 2:1.6.9-2 [692 kB]
Get:76 http://172.17.0.1/private bullseye-staging/main armhf libxcb-render0 armhf 1.14-2 [110 kB]
Get:77 http://172.17.0.1/private bullseye-staging/main armhf libxcb-shm0 armhf 1.14-2 [101 kB]
Get:78 http://172.17.0.1/private bullseye-staging/main armhf libxext6 armhf 2:1.3.3-1+b2 [47.8 kB]
Get:79 http://172.17.0.1/private bullseye-staging/main armhf libxrender1 armhf 1:0.9.10-1 [29.9 kB]
Get:80 http://172.17.0.1/private bullseye-staging/main armhf libcairo2 armhf 1.16.0-4 [599 kB]
Get:81 http://172.17.0.1/private bullseye-staging/main armhf libbrotli1 armhf 1.0.7-6.1 [255 kB]
Get:82 http://172.17.0.1/private bullseye-staging/main armhf libkrb5support0 armhf 1.17-7+rpi1 [61.5 kB]
Get:83 http://172.17.0.1/private bullseye-staging/main armhf libk5crypto3 armhf 1.17-7+rpi1 [112 kB]
Get:84 http://172.17.0.1/private bullseye-staging/main armhf libkeyutils1 armhf 1.6.1-2 [14.5 kB]
Get:85 http://172.17.0.1/private bullseye-staging/main armhf libkrb5-3 armhf 1.17-7+rpi1 [318 kB]
Get:86 http://172.17.0.1/private bullseye-staging/main armhf libgssapi-krb5-2 armhf 1.17-7+rpi1 [135 kB]
Get:87 http://172.17.0.1/private bullseye-staging/main armhf libnghttp2-14 armhf 1.40.0-1+b2 [74.2 kB]
Get:88 http://172.17.0.1/private bullseye-staging/main armhf libpsl5 armhf 0.21.0-1 [53.9 kB]
Get:89 http://172.17.0.1/private bullseye-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b1 [54.3 kB]
Get:90 http://172.17.0.1/private bullseye-staging/main armhf libssh2-1 armhf 1.8.0-2.1 [126 kB]
Get:91 http://172.17.0.1/private bullseye-staging/main armhf libcurl4 armhf 7.68.0-1 [286 kB]
Get:92 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo armhf 1:1.5.2-2+b1 [110 kB]
Get:93 http://172.17.0.1/private bullseye-staging/main armhf libgfortran5 armhf 10.1.0-2+rpi1 [232 kB]
Get:94 http://172.17.0.1/private bullseye-staging/main armhf liblapack3 armhf 3.9.0-2 [1602 kB]
Get:95 http://172.17.0.1/private bullseye-staging/main armhf fontconfig armhf 2.13.1-4.2 [416 kB]
Get:96 http://172.17.0.1/private bullseye-staging/main armhf libfribidi0 armhf 1.0.8-2 [63.5 kB]
Get:97 http://172.17.0.1/private bullseye-staging/main armhf libgraphite2-3 armhf 1.3.14-1 [70.3 kB]
Get:98 http://172.17.0.1/private bullseye-staging/main armhf libharfbuzz0b armhf 2.6.4-1+rpi1 [1308 kB]
Get:99 http://172.17.0.1/private bullseye-staging/main armhf libthai-data all 0.1.28-3 [170 kB]
Get:100 http://172.17.0.1/private bullseye-staging/main armhf libdatrie1 armhf 0.2.12-3+b2 [36.4 kB]
Get:101 http://172.17.0.1/private bullseye-staging/main armhf libthai0 armhf 0.1.28-3 [51.0 kB]
Get:102 http://172.17.0.1/private bullseye-staging/main armhf libpango-1.0-0 armhf 1.44.7-4 [165 kB]
Get:103 http://172.17.0.1/private bullseye-staging/main armhf libpangoft2-1.0-0 armhf 1.44.7-4 [52.6 kB]
Get:104 http://172.17.0.1/private bullseye-staging/main armhf libpangocairo-1.0-0 armhf 1.44.7-4 [44.9 kB]
Get:105 http://172.17.0.1/private bullseye-staging/main armhf libtcl8.6 armhf 8.6.10+dfsg-1 [886 kB]
Get:106 http://172.17.0.1/private bullseye-staging/main armhf libjbig0 armhf 2.1-3.1+b2 [27.6 kB]
Get:107 http://172.17.0.1/private bullseye-staging/main armhf libwebp6 armhf 0.6.1-2 [228 kB]
Get:108 http://172.17.0.1/private bullseye-staging/main armhf libtiff5 armhf 4.1.0+git191117-2 [250 kB]
Get:109 http://172.17.0.1/private bullseye-staging/main armhf libxft2 armhf 2.3.2-2 [49.3 kB]
Get:110 http://172.17.0.1/private bullseye-staging/main armhf x11-common all 1:7.7+20 [252 kB]
Get:111 http://172.17.0.1/private bullseye-staging/main armhf libxss1 armhf 1:1.2.3-1 [17.3 kB]
Get:112 http://172.17.0.1/private bullseye-staging/main armhf libtk8.6 armhf 8.6.10-1 [678 kB]
Get:113 http://172.17.0.1/private bullseye-staging/main armhf libice6 armhf 2:1.0.9-2 [51.6 kB]
Get:114 http://172.17.0.1/private bullseye-staging/main armhf libsm6 armhf 2:1.2.3-1 [32.9 kB]
Get:115 http://172.17.0.1/private bullseye-staging/main armhf libxt6 armhf 1:1.1.5-1+b3 [156 kB]
Get:116 http://172.17.0.1/private bullseye-staging/main armhf r-base-core armhf 4.0.0-3 [24.6 MB]
Get:117 http://172.17.0.1/private bullseye-staging/main armhf libgfortran-9-dev armhf 9.3.0-13+rpi1 [278 kB]
Get:118 http://172.17.0.1/private bullseye-staging/main armhf gfortran-9 armhf 9.3.0-13+rpi1 [8108 kB]
Get:119 http://172.17.0.1/private bullseye-staging/main armhf gfortran armhf 4:9.2.1-3.1+rpi1 [1440 B]
Get:120 http://172.17.0.1/private bullseye-staging/main armhf libblas-dev armhf 3.9.0-2 [113 kB]
Get:121 http://172.17.0.1/private bullseye-staging/main armhf liblapack-dev armhf 3.9.0-2 [2981 kB]
Get:122 http://172.17.0.1/private bullseye-staging/main armhf libncurses6 armhf 6.2-1 [79.5 kB]
Get:123 http://172.17.0.1/private bullseye-staging/main armhf libncurses-dev armhf 6.2-1 [284 kB]
Get:124 http://172.17.0.1/private bullseye-staging/main armhf libncurses5-dev armhf 6.2-1 [932 B]
Get:125 http://172.17.0.1/private bullseye-staging/main armhf libreadline-dev armhf 8.0-4 [116 kB]
Get:126 http://172.17.0.1/private bullseye-staging/main armhf libjpeg62-turbo-dev armhf 1:1.5.2-2+b1 [179 kB]
Get:127 http://172.17.0.1/private bullseye-staging/main armhf libjpeg-dev all 1:1.5.2-2 [57.5 kB]
Get:128 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-16-0 armhf 10.34-7 [190 kB]
Get:129 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-32-0 armhf 10.34-7 [181 kB]
Get:130 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-posix2 armhf 10.34-7 [44.7 kB]
Get:131 http://172.17.0.1/private bullseye-staging/main armhf libpcre2-dev armhf 10.34-7 [614 kB]
Get:132 http://172.17.0.1/private bullseye-staging/main armhf libpcre16-3 armhf 2:8.39-12 [234 kB]
Get:133 http://172.17.0.1/private bullseye-staging/main armhf libpcre32-3 armhf 2:8.39-12 [227 kB]
Get:134 http://172.17.0.1/private bullseye-staging/main armhf libpcrecpp0v5 armhf 2:8.39-12 [150 kB]
Get:135 http://172.17.0.1/private bullseye-staging/main armhf libpcre3-dev armhf 2:8.39-12 [564 kB]
Get:136 http://172.17.0.1/private bullseye-staging/main armhf zlib1g-dev armhf 1:1.2.11.dfsg-2 [184 kB]
Get:137 http://172.17.0.1/private bullseye-staging/main armhf libpng-dev armhf 1.6.37-2 [276 kB]
Get:138 http://172.17.0.1/private bullseye-staging/main armhf libbz2-dev armhf 1.0.8-2 [27.7 kB]
Get:139 http://172.17.0.1/private bullseye-staging/main armhf liblzma-dev armhf 5.2.4-1 [203 kB]
Get:140 http://172.17.0.1/private bullseye-staging/main armhf icu-devtools armhf 63.2-3 [163 kB]
Get:141 http://172.17.0.1/private bullseye-staging/main armhf libicu-dev armhf 63.2-3 [8860 kB]
Get:142 http://172.17.0.1/private bullseye-staging/main armhf libxmuu1 armhf 2:1.1.2-2+b3 [23.4 kB]
Get:143 http://172.17.0.1/private bullseye-staging/main armhf xauth armhf 1:1.0.10-1 [36.4 kB]
Get:144 http://172.17.0.1/private bullseye-staging/main armhf pkg-config armhf 0.29.2-1 [61.5 kB]
Get:145 http://172.17.0.1/private bullseye-staging/main armhf r-base-dev all 4.0.0-3 [4480 B]
Get:146 http://172.17.0.1/private bullseye-staging/main armhf libfile-which-perl all 1.23-1 [16.6 kB]
Get:147 http://172.17.0.1/private bullseye-staging/main armhf dh-r all 20200314 [39.1 kB]
Get:148 http://172.17.0.1/private bullseye-staging/main armhf fonts-font-awesome all 5.0.10+really4.7.0~dfsg-1 [515 kB]
Get:149 http://172.17.0.1/private bullseye-staging/main armhf fonts-glyphicons-halflings all 1.009~3.4.1+dfsg-1 [164 kB]
Get:150 http://172.17.0.1/private bullseye-staging/main armhf libboost1.67-dev armhf 1.67.0-18 [8389 kB]
Get:151 http://172.17.0.1/private bullseye-staging/main armhf libboost-dev armhf 1.67.0.2+b12 [4464 B]
Get:152 http://172.17.0.1/private bullseye-staging/main armhf libjs-bootstrap all 3.4.1+dfsg-1 [173 kB]
Get:153 http://172.17.0.1/private bullseye-staging/main armhf libjs-d3 all 3.5.17-2 [132 kB]
Get:154 http://172.17.0.1/private bullseye-staging/main armhf libjs-es5-shim all 4.5.14-1 [43.1 kB]
Get:155 http://172.17.0.1/private bullseye-staging/main armhf libjs-highlight.js all 9.12.0+dfsg1-5 [300 kB]
Get:156 http://172.17.0.1/private bullseye-staging/main armhf node-jquery all 3.5.1+dfsg-3 [309 kB]
Get:157 http://172.17.0.1/private bullseye-staging/main armhf libjs-jquery all 3.5.1+dfsg-3 [3548 B]
Get:158 http://172.17.0.1/private bullseye-staging/main armhf libjs-jquery-datatables all 1.10.21+dfsg-1 [137 kB]
Get:159 http://172.17.0.1/private bullseye-staging/main armhf libjs-sifter.js all 0.6.0+dfsg-1 [12.1 kB]
Get:160 http://172.17.0.1/private bullseye-staging/main armhf libjs-microplugin.js all 0.0.3+dfsg-1 [3430 B]
Get:161 http://172.17.0.1/private bullseye-staging/main armhf libjs-jquery-selectize.js all 0.12.6+dfsg-1 [51.9 kB]
Get:162 http://172.17.0.1/private bullseye-staging/main armhf libjs-jquery-ui all 1.12.1+dfsg-5 [232 kB]
Get:163 http://172.17.0.1/private bullseye-staging/main armhf libjs-json all 0~20190826-1 [19.1 kB]
Get:164 http://172.17.0.1/private bullseye-staging/main armhf libjs-twitter-bootstrap-datepicker all 1.3.1+dfsg1-4 [32.0 kB]
Get:165 http://172.17.0.1/private bullseye-staging/main armhf libuv1 armhf 1.35.0-2 [115 kB]
Get:166 http://172.17.0.1/private bullseye-staging/main armhf r-cran-littler armhf 0.3.9-1+b1 [308 kB]
Get:167 http://172.17.0.1/private bullseye-staging/main armhf littler all 0.3.9-1 [14.6 kB]
Get:168 http://172.17.0.1/private bullseye-staging/main armhf node-html5shiv all 3.7.3+dfsg-3 [12.9 kB]
Get:169 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-biocgenerics all 0.34.0-1 [639 kB]
Get:170 http://172.17.0.1/private bullseye-staging/main armhf r-bioc-impute armhf 1.62.0-1 [663 kB]
Get:171 http://172.17.0.1/private bullseye-staging/main armhf r-cran-assertthat all 0.2.1-2 [56.5 kB]
Get:172 http://172.17.0.1/private bullseye-staging/main armhf r-cran-bh all 1.66.0-1 [5072 B]
Get:173 http://172.17.0.1/private bullseye-staging/main armhf r-cran-crayon all 1.3.4-5 [750 kB]
Get:174 http://172.17.0.1/private bullseye-staging/main armhf r-cran-glue armhf 1.4.1-1 [138 kB]
Get:175 http://172.17.0.1/private bullseye-staging/main armhf r-cran-fansi armhf 0.4.1-1+b1 [337 kB]
Get:176 http://172.17.0.1/private bullseye-staging/main armhf r-cran-cli all 2.0.2-2 [392 kB]
Get:177 http://172.17.0.1/private bullseye-staging/main armhf r-cran-digest armhf 0.6.25-1+b1 [177 kB]
Get:178 http://172.17.0.1/private bullseye-staging/main armhf r-cran-rlang armhf 0.4.6-1+b1 [1117 kB]
Get:179 http://172.17.0.1/private bullseye-staging/main armhf r-cran-ellipsis armhf 0.3.1-1 [31.5 kB]
Get:180 http://172.17.0.1/private bullseye-staging/main armhf r-cran-fastmap armhf 1.0.1-2+b1 [41.7 kB]
Get:181 http://172.17.0.1/private bullseye-staging/main armhf r-cran-fs armhf 1.4.1+dfsg-1+b1 [219 kB]
Get:182 http://172.17.0.1/private bullseye-staging/main armhf r-cran-gsa all 1.03.1-2 [101 kB]
Get:183 http://172.17.0.1/private bullseye-staging/main armhf r-cran-pkgkitten all 0.1.5-2 [23.7 kB]
Get:184 http://172.17.0.1/private bullseye-staging/main armhf r-cran-rcpp armhf 1.0.4.6-1+b1 [1907 kB]
Get:185 http://172.17.0.1/private bullseye-staging/main armhf r-cran-htmltools armhf 0.4.0-2 [196 kB]
Get:186 http://172.17.0.1/private bullseye-staging/main armhf r-cran-r6 all 2.4.1-2 [79.2 kB]
Get:187 http://172.17.0.1/private bullseye-staging/main armhf r-cran-later armhf 1.0.0+dfsg-2+b1 [96.9 kB]
Get:188 http://172.17.0.1/private bullseye-staging/main armhf r-cran-magrittr all 1.5-6 [154 kB]
Get:189 http://172.17.0.1/private bullseye-staging/main armhf r-cran-promises armhf 1.1.0-1+b1 [1202 kB]
Get:190 http://172.17.0.1/private bullseye-staging/main armhf r-cran-httpuv armhf 1.5.2+dfsg-2 [447 kB]
Get:191 http://172.17.0.1/private bullseye-staging/main armhf r-cran-jsonlite armhf 1.6.1+dfsg-1+b1 [437 kB]
Get:192 http://172.17.0.1/private bullseye-staging/main armhf r-cran-lifecycle all 0.2.0-2 [93.2 kB]
Get:193 http://172.17.0.1/private bullseye-staging/main armhf r-cran-matrixstats armhf 0.56.0-1+b1 [582 kB]
Get:194 http://172.17.0.1/private bullseye-staging/main armhf r-cran-mime armhf 0.9-1+b1 [35.4 kB]
Get:195 http://172.17.0.1/private bullseye-staging/main armhf r-cran-zip armhf 2.0.4-1+b1 [104 kB]
Get:196 http://172.17.0.1/private bullseye-staging/main armhf r-cran-stringi armhf 1.4.6-1+b1 [686 kB]
Get:197 http://172.17.0.1/private bullseye-staging/main armhf r-cran-openxlsx armhf 4.1.5-1+b1 [1930 kB]
Get:198 http://172.17.0.1/private bullseye-staging/main armhf r-cran-utf8 armhf 1.1.4-1+b2 [127 kB]
Get:199 http://172.17.0.1/private bullseye-staging/main armhf r-cran-vctrs armhf 0.3.0-2 [957 kB]
Get:200 http://172.17.0.1/private bullseye-staging/main armhf r-cran-pillar all 1.4.4-2 [230 kB]
Get:201 http://172.17.0.1/private bullseye-staging/main armhf r-cran-pkgconfig all 2.0.3-2 [19.6 kB]
Get:202 http://172.17.0.1/private bullseye-staging/main armhf r-cran-xtable all 1:1.8-4-2 [689 kB]
Get:203 http://172.17.0.1/private bullseye-staging/main armhf r-cran-sourcetools armhf 0.1.7-2+b1 [44.2 kB]
Get:204 http://172.17.0.1/private bullseye-staging/main armhf r-cran-shiny all 1.4.0.2+dfsg-2 [3190 kB]
Get:205 http://172.17.0.1/private bullseye-staging/main armhf r-cran-tibble armhf 3.0.1-1+b1 [425 kB]
Get:206 http://172.17.0.1/private bullseye-staging/main armhf r-cran-shinyfiles all 0.8.0-2 [404 kB]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 141 MB in 24s (5769 kB/s)
(Reading database ... 12233 files and directories currently installed.)
Removing libgcc1 (1:10.1.0-1+rpi1) ...
Selecting previously unselected package libbsd0:armhf.
(Reading database ... 12230 files and directories currently installed.)
Preparing to unpack .../0-libbsd0_0.10.0-1_armhf.deb ...
Unpacking libbsd0:armhf (0.10.0-1) ...
Selecting previously unselected package libtinfo5:armhf.
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Unpacking libtinfo5:armhf (6.2-1) ...
Selecting previously unselected package bsdmainutils.
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Unpacking bsdmainutils (11.1.2) ...
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Setting up gcc-9-base:armhf (9.3.0-13+rpi1) ...
Setting up libbz2-dev:armhf (1.0.8-2) ...
Setting up libfile-stripnondeterminism-perl (1.8.1-1) ...
Setting up libice6:armhf (2:1.0.9-2) ...
Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up liblapack3:armhf (3.9.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up libncurses-dev:armhf (6.2-1) ...
Setting up libxcb1:armhf (1.14-2) ...
Setting up libpcre2-dev:armhf (10.34-7) ...
Setting up libtool (2.4.6-14) ...
Setting up libxcb-render0:armhf (1.14-2) ...
Setting up libpcre3-dev:armhf (2:8.39-12) ...
Setting up libjs-twitter-bootstrap-datepicker (1.3.1+dfsg1-4) ...
Setting up libpng-dev:armhf (1.6.37-2) ...
Setting up libjpeg-dev (1:1.5.2-2) ...
Setting up m4 (1.4.18-4) ...
Setting up libxcb-shm0:armhf (1.14-2) ...
Setting up libreadline-dev:armhf (8.0-4) ...
Setting up libthai0:armhf (0.1.28-3) ...
Setting up ca-certificates (20190110) ...
Updating certificates in /etc/ssl/certs...
128 added, 0 removed; done.
Setting up libasan5:armhf (9.3.0-13+rpi1) ...
Setting up libfreetype6:armhf (2.10.1-2) ...
Setting up bsdmainutils (11.1.2) ...
update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode
update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode
Setting up liblapack-dev:armhf (3.9.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode
Setting up libgssapi-krb5-2:armhf (1.17-7+rpi1) ...
Setting up libcroco3:armhf (0.6.13-1) ...
Setting up ucf (3.0042) ...
Setting up autoconf (2.69-11.1) ...
Setting up dh-strip-nondeterminism (1.8.1-1) ...
Setting up dwz (0.13-5) ...
Setting up groff-base (1.22.4-5) ...
Setting up libncurses5-dev:armhf (6.2-1) ...
Setting up cpp-9 (9.3.0-13+rpi1) ...
Setting up libcurl4:armhf (7.68.0-1) ...
Setting up libx11-6:armhf (2:1.6.9-2) ...
Setting up libharfbuzz0b:armhf (2.6.4-1+rpi1) ...
Setting up libjs-jquery (3.5.1+dfsg-3) ...
Setting up libsm6:armhf (2:1.2.3-1) ...
Setting up libxmuu1:armhf (2:1.1.2-2+b3) ...
Setting up libjs-jquery-selectize.js (0.12.6+dfsg-1) ...
Setting up automake (1:1.16.2-1) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libpaper1:armhf (1.1.28) ...
Creating config file /etc/papersize with new version
Setting up gettext (0.19.8.1-10) ...
Setting up libxrender1:armhf (1:0.9.10-1) ...
Setting up fontconfig-config (2.13.1-4.2) ...
Setting up libxext6:armhf (2:1.3.3-1+b2) ...
Setting up libpaper-utils (1.1.28) ...
Setting up man-db (2.9.1-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libjs-jquery-datatables (1.10.21+dfsg-1) ...
Setting up intltool-debian (0.35.0+20060710.5) ...
Setting up libgcc-9-dev:armhf (9.3.0-13+rpi1) ...
Setting up libjs-jquery-ui (1.12.1+dfsg-5) ...
Setting up libxt6:armhf (1:1.1.5-1+b3) ...
Setting up xauth (1:1.0.10-1) ...
Setting up libxss1:armhf (1:1.2.3-1) ...
Setting up libfontconfig1:armhf (2.13.1-4.2) ...
Setting up gcc-9 (9.3.0-13+rpi1) ...
Setting up fontconfig (2.13.1-4.2) ...
Regenerating fonts cache... done.
Setting up libxft2:armhf (2.3.2-2) ...
Setting up libstdc++-9-dev:armhf (9.3.0-13+rpi1) ...
Setting up po-debconf (1.0.21) ...
Setting up libtk8.6:armhf (8.6.10-1) ...
Setting up libpango-1.0-0:armhf (1.44.7-4) ...
Setting up libgfortran-9-dev:armhf (9.3.0-13+rpi1) ...
Setting up libcairo2:armhf (1.16.0-4) ...
Setting up g++-9 (9.3.0-13+rpi1) ...
Setting up libpangoft2-1.0-0:armhf (1.44.7-4) ...
Setting up libpangocairo-1.0-0:armhf (1.44.7-4) ...
Setting up libboost1.67-dev:armhf (1.67.0-18) ...
Setting up gfortran-9 (9.3.0-13+rpi1) ...
Setting up gfortran (4:9.2.1-3.1+rpi1) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
Setting up r-base-core (4.0.0-3) ...
Creating config file /etc/R/Renviron with new version
Setting up r-cran-crayon (1.3.4-5) ...
Setting up r-cran-sourcetools (0.1.7-2+b1) ...
Setting up r-cran-zip (2.0.4-1+b1) ...
Setting up libboost-dev:armhf (1.67.0.2+b12) ...
Setting up r-cran-r6 (2.4.1-2) ...
Setting up r-cran-pkgkitten (0.1.5-2) ...
Setting up r-cran-gsa (1.03.1-2) ...
Setting up r-cran-magrittr (1.5-6) ...
Setting up r-cran-littler (0.3.9-1+b1) ...
Setting up r-cran-bh (1.66.0-1) ...
Setting up r-cran-fs (1.4.1+dfsg-1+b1) ...
Setting up r-cran-rcpp (1.0.4.6-1+b1) ...
Setting up r-bioc-biocgenerics (0.34.0-1) ...
Setting up r-cran-rlang (0.4.6-1+b1) ...
Setting up r-cran-matrixstats (0.56.0-1+b1) ...
Setting up r-base-dev (4.0.0-3) ...
Setting up r-cran-assertthat (0.2.1-2) ...
Setting up littler (0.3.9-1) ...
Setting up r-bioc-impute (1.62.0-1) ...
Setting up r-cran-mime (0.9-1+b1) ...
Setting up r-cran-digest (0.6.25-1+b1) ...
Setting up r-cran-fansi (0.4.1-1+b1) ...
Setting up r-cran-glue (1.4.1-1) ...
Setting up r-cran-xtable (1:1.8-4-2) ...
Setting up r-cran-cli (2.0.2-2) ...
Setting up r-cran-lifecycle (0.2.0-2) ...
Setting up r-cran-fastmap (1.0.1-2+b1) ...
Setting up r-cran-jsonlite (1.6.1+dfsg-1+b1) ...
Setting up r-cran-pkgconfig (2.0.3-2) ...
Setting up r-cran-utf8 (1.1.4-1+b2) ...
Setting up r-cran-stringi (1.4.6-1+b1) ...
Setting up r-cran-later (1.0.0+dfsg-2+b1) ...
Setting up r-cran-htmltools (0.4.0-2) ...
Setting up r-cran-ellipsis (0.3.1-1) ...
Setting up r-cran-openxlsx (4.1.5-1+b1) ...
Setting up r-cran-promises (1.1.0-1+b1) ...
Setting up r-cran-vctrs (0.3.0-2) ...
Setting up r-cran-pillar (1.4.4-2) ...
Setting up r-cran-httpuv (1.5.2+dfsg-2) ...
Setting up r-cran-tibble (3.0.1-1+b1) ...
Setting up r-cran-shiny (1.4.0.2+dfsg-2) ...
Setting up r-cran-shinyfiles (0.8.0-2) ...
Setting up dh-autoreconf (19) ...
Setting up debhelper (13.1) ...
Setting up dh-r (20200314) ...
Setting up sbuild-build-depends-r-cran-samr-dummy (0.invalid.0) ...
Processing triggers for libc-bin (2.30-8+rpi1) ...
Processing triggers for ca-certificates (20190110) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.15.0-76-generic armhf (armv8l)
Toolchain package versions: binutils_2.34-8+rpi1 dpkg-dev_1.19.7 g++-9_9.3.0-13+rpi1 gcc-9_9.3.0-13+rpi1 libc6-dev_2.30-8+rpi1 libstdc++-9-dev_9.3.0-13+rpi1 libstdc++6_10.1.0-2+rpi1 linux-libc-dev_5.2.17-1+rpi1+b2
Package versions: adduser_3.118 apt_2.1.4 autoconf_2.69-11.1 automake_1:1.16.2-1 autopoint_0.19.8.1-10 autotools-dev_20180224.1 base-files_11+rpi1 base-passwd_3.5.47 bash_5.0-6 binutils_2.34-8+rpi1 binutils-arm-linux-gnueabihf_2.34-8+rpi1 binutils-common_2.34-8+rpi1 bsdmainutils_11.1.2 bsdutils_1:2.35.1-5 build-essential_12.8 bzip2_1.0.8-2 ca-certificates_20190110 coreutils_8.30-3 cpp_4:9.2.1-3.1+rpi1 cpp-9_9.3.0-13+rpi1 dash_0.5.10.2-7 dctrl-tools_2.24-3 debconf_1.5.74 debhelper_13.1 debianutils_4.9.1 dh-autoreconf_19 dh-r_20200314 dh-strip-nondeterminism_1.8.1-1 diffutils_1:3.7-3 dirmngr_2.2.20-1 dpkg_1.19.7 dpkg-dev_1.19.7 dwz_0.13-5 e2fsprogs_1.45.6-1 fakeroot_1.24-1 fdisk_2.35.1-5 file_1:5.38-5 findutils_4.7.0-1 fontconfig_2.13.1-4.2 fontconfig-config_2.13.1-4.2 fonts-dejavu-core_2.37-1 fonts-font-awesome_5.0.10+really4.7.0~dfsg-1 fonts-glyphicons-halflings_1.009~3.4.1+dfsg-1 g++_4:9.2.1-3.1+rpi1 g++-9_9.3.0-13+rpi1 gcc_4:9.2.1-3.1+rpi1 gcc-10-base_10.1.0-2+rpi1 gcc-9_9.3.0-13+rpi1 gcc-9-base_9.3.0-13+rpi1 gettext_0.19.8.1-10 gettext-base_0.19.8.1-10 gfortran_4:9.2.1-3.1+rpi1 gfortran-9_9.3.0-13+rpi1 gnupg_2.2.20-1 gnupg-l10n_2.2.20-1 gnupg-utils_2.2.20-1 gpg_2.2.20-1 gpg-agent_2.2.20-1 gpg-wks-client_2.2.20-1 gpg-wks-server_2.2.20-1 gpgconf_2.2.20-1 gpgsm_2.2.20-1 gpgv_2.2.20-1 grep_3.4-1 groff-base_1.22.4-5 gzip_1.10-2 hostname_3.23 icu-devtools_63.2-3 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 iputils-ping_3:20190709-3 libacl1_2.2.53-8 libapt-pkg6.0_2.1.4 libarchive-zip-perl_1.68-1 libasan5_9.3.0-13+rpi1 libassuan0_2.5.3-7 libatomic1_10.1.0-2+rpi1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3 libaudit1_1:2.8.5-3 libbinutils_2.34-8+rpi1 libblas-dev_3.9.0-2 libblas3_3.9.0-2 libblkid1_2.35.1-5 libboost-dev_1.67.0.2+b12 libboost1.67-dev_1.67.0-18 libbrotli1_1.0.7-6.1 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libbz2-dev_1.0.8-2 libc-bin_2.30-8+rpi1 libc-dev-bin_2.30-8+rpi1 libc6_2.30-8+rpi1 libc6-dev_2.30-8+rpi1 libcairo2_1.16.0-4 libcap-ng0_0.7.9-2.1+b1 libcap2_1:2.34-2 libcap2-bin_1:2.34-2 libcc1-0_10.1.0-2+rpi1 libcom-err2_1.45.6-1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.16-1 libcrypt1_1:4.4.16-1 libctf-nobfd0_2.34-8+rpi1 libctf0_2.34-8+rpi1 libcurl4_7.68.0-1 libdatrie1_0.2.12-3+b2 libdb5.3_5.3.28+dfsg1-0.6 libdebconfclient0_0.252 libdebhelper-perl_13.1 libdpkg-perl_1.19.7 libelf1_0.176-1.1 libexpat1_2.2.9-1 libext2fs2_1.45.6-1 libfakeroot_1.24-1 libfdisk1_2.35.1-5 libffi7_3.3-4 libfile-stripnondeterminism-perl_1.8.1-1 libfile-which-perl_1.23-1 libfontconfig1_2.13.1-4.2 libfreetype6_2.10.1-2 libfribidi0_1.0.8-2 libgcc-9-dev_9.3.0-13+rpi1 libgcc-s1_10.1.0-2+rpi1 libgcrypt20_1.8.5-5 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libgfortran-9-dev_9.3.0-13+rpi1 libgfortran5_10.1.0-2+rpi1 libglib2.0-0_2.64.2-1 libgmp10_2:6.2.0+dfsg-4 libgnutls30_3.6.13-2 libgomp1_10.1.0-2+rpi1 libgpg-error0_1.37-1 libgraphite2-3_1.3.14-1 libgssapi-krb5-2_1.17-7+rpi1 libharfbuzz0b_2.6.4-1+rpi1 libhogweed5_3.5.1+really3.5.1-2 libice6_2:1.0.9-2 libicu-dev_63.2-3 libicu63_63.2-3 libidn2-0_2.3.0-1 libisl22_0.22.1-1 libjbig0_2.1-3.1+b2 libjpeg-dev_1:1.5.2-2 libjpeg62-turbo_1:1.5.2-2+b1 libjpeg62-turbo-dev_1:1.5.2-2+b1 libjs-bootstrap_3.4.1+dfsg-1 libjs-d3_3.5.17-2 libjs-es5-shim_4.5.14-1 libjs-highlight.js_9.12.0+dfsg1-5 libjs-jquery_3.5.1+dfsg-3 libjs-jquery-datatables_1.10.21+dfsg-1 libjs-jquery-selectize.js_0.12.6+dfsg-1 libjs-jquery-ui_1.12.1+dfsg-5 libjs-json_0~20190826-1 libjs-microplugin.js_0.0.3+dfsg-1 libjs-sifter.js_0.6.0+dfsg-1 libjs-twitter-bootstrap-datepicker_1.3.1+dfsg1-4 libk5crypto3_1.17-7+rpi1 libkeyutils1_1.6.1-2 libkrb5-3_1.17-7+rpi1 libkrb5support0_1.17-7+rpi1 libksba8_1.3.5-2 liblapack-dev_3.9.0-2 liblapack3_3.9.0-2 libldap-2.4-2_2.4.50+dfsg-1 libldap-common_2.4.50+dfsg-1 liblz4-1_1.9.2-2 liblzma-dev_5.2.4-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.38-5 libmagic1_1:5.38-5 libmount1_2.35.1-5 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libncurses-dev_6.2-1 libncurses5-dev_6.2-1 libncurses6_6.2-1 libncursesw6_6.2-1 libnettle7_3.5.1+really3.5.1-2 libnghttp2-14_1.40.0-1+b2 libnpth0_1.6-1 libp11-kit0_0.23.20-1 libpam-cap_1:2.34-2 libpam-modules_1.3.1-5 libpam-modules-bin_1.3.1-5 libpam-runtime_1.3.1-5 libpam0g_1.3.1-5 libpango-1.0-0_1.44.7-4 libpangocairo-1.0-0_1.44.7-4 libpangoft2-1.0-0_1.44.7-4 libpaper-utils_1.1.28 libpaper1_1.1.28 libpcre16-3_2:8.39-12 libpcre2-16-0_10.34-7 libpcre2-32-0_10.34-7 libpcre2-8-0_10.34-7 libpcre2-dev_10.34-7 libpcre2-posix2_10.34-7 libpcre3_2:8.39-12 libpcre3-dev_2:8.39-12 libpcre32-3_2:8.39-12 libpcrecpp0v5_2:8.39-12 libperl5.30_5.30.0-10 libpipeline1_1.5.2-2 libpixman-1-0_0.36.0-1 libpng-dev_1.6.37-2 libpng16-16_1.6.37-2 libpsl5_0.21.0-1 libreadline-dev_8.0-4 libreadline7_7.0-5 libreadline8_8.0-4 librtmp1_2.4+20151223.gitfa8646d.1-2+b1 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.4.3-1+rpi1 libselinux1_3.0-1+b1 libsemanage-common_3.0-1 libsemanage1_3.0-1+b1 libsepol1_3.0-1 libsigsegv2_2.12-2 libsm6_2:1.2.3-1 libsmartcols1_2.35.1-5 libsqlite3-0_3.31.1-5 libss2_1.45.6-1 libssh2-1_1.8.0-2.1 libssl1.1_1.1.1g-1 libstdc++-9-dev_9.3.0-13+rpi1 libstdc++6_10.1.0-2+rpi1 libsub-override-perl_0.09-2 libswitch-perl_2.17-2 libsystemd0_245.5-3+rpi1 libtasn1-6_4.16.0-2 libtcl8.6_8.6.10+dfsg-1 libthai-data_0.1.28-3 libthai0_0.1.28-3 libtiff5_4.1.0+git191117-2 libtinfo5_6.2-1 libtinfo6_6.2-1 libtk8.6_8.6.10-1 libtool_2.4.6-14 libubsan1_10.1.0-2+rpi1 libuchardet0_0.0.6-3 libudev1_245.5-3+rpi1 libunistring2_0.9.10-2 libuuid1_2.35.1-5 libuv1_1.35.0-2 libwebp6_0.6.1-2 libx11-6_2:1.6.9-2 libx11-data_2:1.6.9-2 libxau6_1:1.0.8-1+b2 libxcb-render0_1.14-2 libxcb-shm0_1.14-2 libxcb1_1.14-2 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1+b2 libxft2_2.3.2-2 libxml2_2.9.10+dfsg-5 libxmuu1_2:1.1.2-2+b3 libxrender1_1:0.9.10-1 libxss1_1:1.2.3-1 libxt6_1:1.1.5-1+b3 libzstd1_1.4.4+dfsg-3+rpi1 linux-libc-dev_5.2.17-1+rpi1+b2 littler_0.3.9-1 login_1:4.8.1-1 logsave_1.45.6-1 lsb-base_11.1.0+rpi1 m4_1.4.18-4 make_4.2.1-2 man-db_2.9.1-1 mawk_1.3.4.20200120-2 mount_2.35.1-5 ncurses-base_6.2-1 ncurses-bin_6.2-1 netbase_6.1 node-html5shiv_3.7.3+dfsg-3 node-jquery_3.5.1+dfsg-3 node-normalize.css_8.0.1-3 openssl_1.1.1g-1 passwd_1:4.8.1-1 patch_2.7.6-6 perl_5.30.0-10 perl-base_5.30.0-10 perl-modules-5.30_5.30.0-10 pinentry-curses_1.1.0-4 pkg-config_0.29.2-1 po-debconf_1.0.21 r-base-core_4.0.0-3 r-base-dev_4.0.0-3 r-bioc-biocgenerics_0.34.0-1 r-bioc-impute_1.62.0-1 r-cran-assertthat_0.2.1-2 r-cran-bh_1.66.0-1 r-cran-cli_2.0.2-2 r-cran-crayon_1.3.4-5 r-cran-digest_0.6.25-1+b1 r-cran-ellipsis_0.3.1-1 r-cran-fansi_0.4.1-1+b1 r-cran-fastmap_1.0.1-2+b1 r-cran-fs_1.4.1+dfsg-1+b1 r-cran-glue_1.4.1-1 r-cran-gsa_1.03.1-2 r-cran-htmltools_0.4.0-2 r-cran-httpuv_1.5.2+dfsg-2 r-cran-jsonlite_1.6.1+dfsg-1+b1 r-cran-later_1.0.0+dfsg-2+b1 r-cran-lifecycle_0.2.0-2 r-cran-littler_0.3.9-1+b1 r-cran-magrittr_1.5-6 r-cran-matrixstats_0.56.0-1+b1 r-cran-mime_0.9-1+b1 r-cran-openxlsx_4.1.5-1+b1 r-cran-pillar_1.4.4-2 r-cran-pkgconfig_2.0.3-2 r-cran-pkgkitten_0.1.5-2 r-cran-promises_1.1.0-1+b1 r-cran-r6_2.4.1-2 r-cran-rcpp_1.0.4.6-1+b1 r-cran-rlang_0.4.6-1+b1 r-cran-shiny_1.4.0.2+dfsg-2 r-cran-shinyfiles_0.8.0-2 r-cran-sourcetools_0.1.7-2+b1 r-cran-stringi_1.4.6-1+b1 r-cran-tibble_3.0.1-1+b1 r-cran-utf8_1.1.4-1+b2 r-cran-vctrs_0.3.0-2 r-cran-xtable_1:1.8-4-2 r-cran-zip_2.0.4-1+b1 raspbian-archive-keyring_20120528.2 readline-common_8.0-4 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-r-cran-samr-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 sysvinit-utils_2.96-3 tar_1.30+dfsg-7 tzdata_2020a-1 ucf_3.0042 unzip_6.0-25 util-linux_2.35.1-5 x11-common_1:7.7+20 xauth_1:1.0.10-1 xdg-utils_1.1.3-2 xz-utils_5.2.4-1 zip_3.0-11 zlib1g_1:1.2.11.dfsg-2 zlib1g-dev_1:1.2.11.dfsg-2
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/sbuild-nonexistent/.gnupg/trustedkeys.kbx': General error
gpgv: Signature made Tue Dec 18 07:19:52 2018 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: failed to verify signature on ./r-cran-samr_3.0-1.dsc
dpkg-source: info: extracting r-cran-samr in /<<PKGBUILDDIR>>
dpkg-source: info: unpacking r-cran-samr_3.0.orig.tar.gz
dpkg-source: info: unpacking r-cran-samr_3.0-1.debian.tar.xz
Check disk space
----------------
Sufficient free space for build
Hack binNMU version
-------------------
Created changelog entry for binNMU version 3.0-1+b1
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bullseye-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bullseye-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=112
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bullseye-staging-armhf-sbuild-f67dae85-401a-4d04-b5b3-2562b51b9d86
SCHROOT_UID=107
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package r-cran-samr
dpkg-buildpackage: info: source version 3.0-1+b1
dpkg-buildpackage: info: source distribution bullseye-staging
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
fakeroot debian/rules clean
dh clean --buildsystem R
dh_auto_clean -O--buildsystem=R
dh_autoreconf_clean -O--buildsystem=R
dh_clean -O--buildsystem=R
debian/rules build-arch
dh build-arch --buildsystem R
dh_update_autotools_config -a -O--buildsystem=R
dh_autoreconf -a -O--buildsystem=R
dh_auto_configure -a -O--buildsystem=R
dh_auto_build -a -O--buildsystem=R
dh_auto_test -a -O--buildsystem=R
create-stamp debian/debhelper-build-stamp
fakeroot debian/rules binary-arch
dh binary-arch --buildsystem R
dh_testroot -a -O--buildsystem=R
dh_prep -a -O--buildsystem=R
dh_auto_install -a -O--buildsystem=R
I: R Package: samr Version: 3.0
I: Building using R version 4.0.0-3
I: R API version: r-api-4.0
I: Using built-time from d/changelog: Tue, 18 Dec 2018 08:16:30 +0100
mkdir -p /<<PKGBUILDDIR>>/debian/r-cran-samr/usr/lib/R/site-library
R CMD INSTALL -l /<<PKGBUILDDIR>>/debian/r-cran-samr/usr/lib/R/site-library --clean . "--built-timestamp='Tue, 18 Dec 2018 08:16:30 +0100'"
* installing *source* package 'samr' ...
** package 'samr' successfully unpacked and MD5 sums checked
** using staged installation
** libs
make[1]: Entering directory '/<<PKGBUILDDIR>>/src'
gfortran -fno-optimize-sibling-calls -fpic -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -c rankcol.f -o rankcol.o
gcc -std=gnu99 -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-qUFFBN/r-base-4.0.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c samr_init.c -o samr_init.o
gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-z,relro -o samr.so rankcol.o samr_init.o -lgfortran -lm -L/usr/lib/R/lib -lR
make[1]: Leaving directory '/<<PKGBUILDDIR>>/src'
make[1]: Entering directory '/<<PKGBUILDDIR>>/src'
make[1]: Leaving directory '/<<PKGBUILDDIR>>/src'
installing to /<<PKGBUILDDIR>>/debian/r-cran-samr/usr/lib/R/site-library/00LOCK-r-cran-samr-3.0/00new/samr/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (samr)
Use of uninitialized value $dep_line in substitution (s///) at /usr/share/perl5/Dpkg/Deps.pm line 292.
Use of uninitialized value $dep_line in substitution (s///) at /usr/share/perl5/Dpkg/Deps.pm line 293.
Use of uninitialized value $dep_line in split at /usr/share/perl5/Dpkg/Deps.pm line 296.
I: Using r-bioc-impute for Imports:impute
I: Using r-cran-matrixstats for Imports:matrixStats
I: Using r-cran-shiny for Imports:shiny
I: Using r-cran-shinyfiles for Imports:shinyFiles
I: Using r-cran-openxlsx for Imports:openxlsx
I: Using r-cran-gsa for Imports:GSA
dh_installdocs -a -O--buildsystem=R
dh_installchangelogs -a -O--buildsystem=R
dh_installinit -a -O--buildsystem=R
dh_perl -a -O--buildsystem=R
dh_link -a -O--buildsystem=R
dh_strip_nondeterminism -a -O--buildsystem=R
dh_compress -a -O--buildsystem=R
debian/rules override_dh_fixperms
make[1]: Entering directory '/<<PKGBUILDDIR>>'
dh_fixperms
find debian -name "*.R" -exec chmod -x \{\} \;
find debian -name "*.xlsx" -exec chmod -x \{\} \;
find debian -iname "*.rmd" -exec chmod -x \{\} \;
make[1]: Leaving directory '/<<PKGBUILDDIR>>'
dh_missing -a -O--buildsystem=R
dh_strip -a -O--buildsystem=R
dh_makeshlibs -a -O--buildsystem=R
dh_shlibdeps -a -O--buildsystem=R
dh_installdeb -a -O--buildsystem=R
dh_gencontrol -a -O--buildsystem=R
dh_md5sums -a -O--buildsystem=R
dh_builddeb -a -O--buildsystem=R
dpkg-deb: building package 'r-cran-samr' in '../r-cran-samr_3.0-1+b1_armhf.deb'.
dpkg-deb: building package 'r-cran-samr-dbgsym' in '../r-cran-samr-dbgsym_3.0-1+b1_armhf.deb'.
dpkg-genbuildinfo --build=any
dpkg-genchanges --build=any -mRaspbian mythic lxc autobuilder 1 <root@raspbian.org> >../r-cran-samr_3.0-1+b1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2020-05-31T02:50:05Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
r-cran-samr_3.0-1+b1_armhf.changes:
-----------------------------------
Format: 1.8
Date: Tue, 18 Dec 2018 08:16:30 +0100
Source: r-cran-samr (3.0-1)
Binary: r-cran-samr r-cran-samr-dbgsym
Binary-Only: yes
Architecture: armhf
Version: 3.0-1+b1
Distribution: bullseye-staging
Urgency: low
Maintainer: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Changed-By: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Description:
r-cran-samr - GNU R significance analysis of microarrays
Changes:
r-cran-samr (3.0-1+b1) bullseye-staging; urgency=low, binary-only=yes
.
* Binary-only non-maintainer upload for armhf; no source changes.
* rebuild due to debcheck failure
Checksums-Sha1:
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9943a8df3c557ee0b3b88c399bd17ae2ae044374 3885340 r-cran-samr_3.0-1+b1_armhf.deb
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Files:
1e50b7651b802b32086ff3573c1500ca 6600 debug optional r-cran-samr-dbgsym_3.0-1+b1_armhf.deb
556917408e54f99065393fa96dffdc6b 9946 gnu-r optional r-cran-samr_3.0-1+b1_armhf.buildinfo
7852ef2bc6e8937b04b3505b45ca0a3d 3885340 gnu-r optional r-cran-samr_3.0-1+b1_armhf.deb
+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
r-cran-samr-dbgsym_3.0-1+b1_armhf.deb
-------------------------------------
new Debian package, version 2.0.
size 6600 bytes: control archive=540 bytes.
389 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: r-cran-samr-dbgsym
Source: r-cran-samr (3.0-1)
Version: 3.0-1+b1
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Installed-Size: 19
Depends: r-cran-samr (= 3.0-1+b1)
Section: debug
Priority: optional
Description: debug symbols for r-cran-samr
Build-Ids: d5f5d863be1f02dba6eb76cb9003770a31799ee5
drwxr-xr-x root/root 0 2018-12-18 07:16 ./
drwxr-xr-x root/root 0 2018-12-18 07:16 ./usr/
drwxr-xr-x root/root 0 2018-12-18 07:16 ./usr/lib/
drwxr-xr-x root/root 0 2018-12-18 07:16 ./usr/lib/debug/
drwxr-xr-x root/root 0 2018-12-18 07:16 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2018-12-18 07:16 ./usr/lib/debug/.build-id/d5/
-rw-r--r-- root/root 8372 2018-12-18 07:16 ./usr/lib/debug/.build-id/d5/f5d863be1f02dba6eb76cb9003770a31799ee5.debug
drwxr-xr-x root/root 0 2018-12-18 07:16 ./usr/share/
drwxr-xr-x root/root 0 2018-12-18 07:16 ./usr/share/doc/
lrwxrwxrwx root/root 0 2018-12-18 07:16 ./usr/share/doc/r-cran-samr-dbgsym -> r-cran-samr
r-cran-samr_3.0-1+b1_armhf.deb
------------------------------
new Debian package, version 2.0.
size 3885340 bytes: control archive=1768 bytes.
900 bytes, 18 lines control
2572 bytes, 33 lines md5sums
Package: r-cran-samr
Source: r-cran-samr (3.0-1)
Version: 3.0-1+b1
Architecture: armhf
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Installed-Size: 3981
Depends: r-base-core (>= 4.0.0-3), r-api-4.0, r-bioc-impute, r-cran-matrixstats, r-cran-shiny, r-cran-shinyfiles, r-cran-openxlsx, r-cran-gsa, libc6 (>= 2.4)
Section: gnu-r
Priority: optional
Homepage: https://cran.r-project.org/package=samr
Description: GNU R significance analysis of microarrays
This GNU R package provides significance analysis of microarrays.
A microarray is a multiplex lab-on-a-chip. It is a 2D array on a solid
substrate (usually a glass slide or silicon thin-film cell) that assays
large amounts of biological material using high-throughput screening
miniaturized, multiplexed and parallel processing and detection methods.
.
This package helps analysing this kind of microarrays.
drwxr-xr-x root/root 0 2018-12-18 07:16 ./
drwxr-xr-x root/root 0 2018-12-18 07:16 ./usr/
drwxr-xr-x root/root 0 2018-12-18 07:16 ./usr/lib/
drwxr-xr-x root/root 0 2018-12-18 07:16 ./usr/lib/R/
drwxr-xr-x root/root 0 2018-12-18 07:16 ./usr/lib/R/site-library/
drwxr-xr-x root/root 0 2018-12-18 07:16 ./usr/lib/R/site-library/samr/
-rw-r--r-- root/root 665 2018-12-18 07:16 ./usr/lib/R/site-library/samr/DESCRIPTION
-rw-r--r-- root/root 1194 2018-12-18 07:16 ./usr/lib/R/site-library/samr/INDEX
drwxr-xr-x root/root 0 2018-12-18 07:16 ./usr/lib/R/site-library/samr/Meta/
-rw-r--r-- root/root 1291 2018-12-18 07:16 ./usr/lib/R/site-library/samr/Meta/Rd.rds
-rw-r--r-- root/root 130 2018-12-18 07:16 ./usr/lib/R/site-library/samr/Meta/features.rds
-rw-r--r-- root/root 1397 2018-12-18 07:16 ./usr/lib/R/site-library/samr/Meta/hsearch.rds
-rw-r--r-- root/root 877 2018-12-18 07:16 ./usr/lib/R/site-library/samr/Meta/links.rds
-rw-r--r-- root/root 862 2018-12-18 07:16 ./usr/lib/R/site-library/samr/Meta/nsInfo.rds
-rw-r--r-- root/root 831 2018-12-18 07:16 ./usr/lib/R/site-library/samr/Meta/package.rds
-rw-r--r-- root/root 1618 2018-12-18 07:16 ./usr/lib/R/site-library/samr/NAMESPACE
drwxr-xr-x root/root 0 2018-12-18 07:16 ./usr/lib/R/site-library/samr/R/
-rw-r--r-- root/root 1056 2018-12-18 07:16 ./usr/lib/R/site-library/samr/R/samr
-rw-r--r-- root/root 132294 2018-12-18 07:16 ./usr/lib/R/site-library/samr/R/samr.rdb
-rw-r--r-- root/root 1388 2018-12-18 07:16 ./usr/lib/R/site-library/samr/R/samr.rdx
drwxr-xr-x root/root 0 2018-12-18 07:16 ./usr/lib/R/site-library/samr/doc/
-rw-r--r-- root/root 372445 2018-12-18 07:16 ./usr/lib/R/site-library/samr/doc/sam.pdf
drwxr-xr-x root/root 0 2018-12-18 07:16 ./usr/lib/R/site-library/samr/excel/
-rw-r--r-- root/root 802735 2018-12-18 07:16 ./usr/lib/R/site-library/samr/excel/Quantitative.xlsx
-rw-r--r-- root/root 802797 2018-12-18 07:16 ./usr/lib/R/site-library/samr/excel/Survival.xlsx
-rw-r--r-- root/root 1793147 2018-12-18 07:16 ./usr/lib/R/site-library/samr/excel/twoclass.xlsx
drwxr-xr-x root/root 0 2018-12-18 07:16 ./usr/lib/R/site-library/samr/help/
-rw-r--r-- root/root 2386 2018-12-18 07:16 ./usr/lib/R/site-library/samr/help/AnIndex
-rw-r--r-- root/root 790 2018-12-18 07:16 ./usr/lib/R/site-library/samr/help/aliases.rds
-rw-r--r-- root/root 296 2018-12-18 07:16 ./usr/lib/R/site-library/samr/help/paths.rds
-rw-r--r-- root/root 53578 2018-12-18 07:16 ./usr/lib/R/site-library/samr/help/samr.rdb
-rw-r--r-- root/root 549 2018-12-18 07:16 ./usr/lib/R/site-library/samr/help/samr.rdx
drwxr-xr-x root/root 0 2018-12-18 07:16 ./usr/lib/R/site-library/samr/html/
-rw-r--r-- root/root 3041 2018-12-18 07:16 ./usr/lib/R/site-library/samr/html/00Index.html
-rw-r--r-- root/root 1335 2018-12-18 07:16 ./usr/lib/R/site-library/samr/html/R.css
drwxr-xr-x root/root 0 2018-12-18 07:16 ./usr/lib/R/site-library/samr/libs/
-rw-r--r-- root/root 5488 2018-12-18 07:16 ./usr/lib/R/site-library/samr/libs/samr.so
drwxr-xr-x root/root 0 2018-12-18 07:16 ./usr/lib/R/site-library/samr/webapp/
-rw-r--r-- root/root 1802 2018-12-18 07:16 ./usr/lib/R/site-library/samr/webapp/GSA.correlate.revised.R
-rw-r--r-- root/root 3063 2018-12-18 07:16 ./usr/lib/R/site-library/samr/webapp/GSA.listsets.revised.R
-rw-r--r-- root/root 903 2018-12-18 07:16 ./usr/lib/R/site-library/samr/webapp/GSA.plot.revised.R
-rw-r--r-- root/root 812 2018-12-18 07:16 ./usr/lib/R/site-library/samr/webapp/README.rmd
-rw-r--r-- root/root 41531 2018-12-18 07:16 ./usr/lib/R/site-library/samr/webapp/server.R
-rw-r--r-- root/root 9615 2018-12-18 07:16 ./usr/lib/R/site-library/samr/webapp/ui.R
drwxr-xr-x root/root 0 2018-12-18 07:16 ./usr/share/
drwxr-xr-x root/root 0 2018-12-18 07:16 ./usr/share/doc/
drwxr-xr-x root/root 0 2018-12-18 07:16 ./usr/share/doc/r-cran-samr/
-rw-r--r-- root/root 220 2018-12-18 07:16 ./usr/share/doc/r-cran-samr/changelog.Debian.armhf.gz
-rw-r--r-- root/root 334 2018-12-18 07:16 ./usr/share/doc/r-cran-samr/changelog.Debian.gz
-rw-r--r-- root/root 1059 2018-12-18 07:16 ./usr/share/doc/r-cran-samr/copyright
+------------------------------------------------------------------------------+
| Post Build |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Cleanup |
+------------------------------------------------------------------------------+
Purging /<<BUILDDIR>>
Not cleaning session: cloned chroot in use
+------------------------------------------------------------------------------+
| Summary |
+------------------------------------------------------------------------------+
Build Architecture: armhf
Build-Space: 11908
Build-Time: 33
Distribution: bullseye-staging
Host Architecture: armhf
Install-Time: 1060
Job: r-cran-samr_3.0-1
Machine Architecture: armhf
Package: r-cran-samr
Package-Time: 1114
Source-Version: 3.0-1
Space: 11908
Status: successful
Version: 3.0-1+b1
--------------------------------------------------------------------------------
Finished at 2020-05-31T02:50:05Z
Build needed 00:18:34, 11908k disk space