r-cran-openmx →
2.21.1+dfsg-1 →
armhf → 2023-02-04 07:10:28
sbuild (Debian sbuild) 0.72.0 (25 Oct 2016) on mb-lxc-01
+==============================================================================+
| r-cran-openmx 2.21.1+dfsg-1 (armhf) Sat, 04 Feb 2023 05:56:52 +0000 |
+==============================================================================+
Package: r-cran-openmx
Version: 2.21.1+dfsg-1
Source Version: 2.21.1+dfsg-1
Distribution: bookworm-staging
Machine Architecture: armhf
Host Architecture: armhf
Build Architecture: armhf
I: NOTICE: Log filtering will replace 'var/lib/schroot/mount/bookworm-staging-armhf-sbuild-66c67b82-f669-49c1-b525-add89e00066e' with '<<CHROOT>>'
+------------------------------------------------------------------------------+
| Update chroot |
+------------------------------------------------------------------------------+
Get:1 http://172.17.4.1/private bookworm-staging InRelease [11.3 kB]
Get:2 http://172.17.4.1/private bookworm-staging/main Sources [13.6 MB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf Packages [14.4 MB]
Fetched 28.1 MB in 10s (2797 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
W: http://172.17.4.1/private/dists/bookworm-staging/InRelease: Key is stored in legacy trusted.gpg keyring (/etc/apt/trusted.gpg), see the DEPRECATION section in apt-key(8) for details.
+------------------------------------------------------------------------------+
| Fetch source files |
+------------------------------------------------------------------------------+
Check APT
---------
Checking available source versions...
Download source files with APT
------------------------------
Reading package lists...
NOTICE: 'r-cran-openmx' packaging is maintained in the 'Git' version control system at:
https://salsa.debian.org/r-pkg-team/r-cran-openmx.git
Please use:
git clone https://salsa.debian.org/r-pkg-team/r-cran-openmx.git
to retrieve the latest (possibly unreleased) updates to the package.
Need to get 3829 kB of source archives.
Get:1 http://172.17.4.1/private bookworm-staging/main r-cran-openmx 2.21.1+dfsg-1 (dsc) [2372 B]
Get:2 http://172.17.4.1/private bookworm-staging/main r-cran-openmx 2.21.1+dfsg-1 (tar) [3820 kB]
Get:3 http://172.17.4.1/private bookworm-staging/main r-cran-openmx 2.21.1+dfsg-1 (diff) [7332 B]
Fetched 3829 kB in 0s (9074 kB/s)
Download complete and in download only mode
I: NOTICE: Log filtering will replace 'build/r-cran-openmx-re23dL/r-cran-openmx-2.21.1+dfsg' with '<<PKGBUILDDIR>>'
I: NOTICE: Log filtering will replace 'build/r-cran-openmx-re23dL' with '<<BUILDDIR>>'
+------------------------------------------------------------------------------+
| Install build-essential |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: build-essential, fakeroot
Filtered Build-Depends: build-essential, fakeroot
dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<<BUILDDIR>>/resolver-nr3t9L/apt_archive/sbuild-build-depends-core-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy
dpkg-scanpackages: info: Wrote 1 entries to output Packages file.
gpg: keybox '/<<BUILDDIR>>/resolver-nr3t9L/gpg/pubring.kbx' created
gpg: /<<BUILDDIR>>/resolver-nr3t9L/gpg/trustdb.gpg: trustdb created
gpg: key 37145E60F90AF620: public key "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" imported
gpg: Total number processed: 1
gpg: imported: 1
gpg: key 37145E60F90AF620: "Sbuild Signer (Sbuild Build Dependency Archive Key) <buildd-tools-devel@lists.alioth.debian.org>" not changed
gpg: key 37145E60F90AF620: secret key imported
gpg: Total number processed: 1
gpg: unchanged: 1
gpg: secret keys read: 1
gpg: secret keys imported: 1
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-nr3t9L/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-nr3t9L/apt_archive ./ Release [957 B]
Get:3 copy:/<<BUILDDIR>>/resolver-nr3t9L/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-nr3t9L/apt_archive ./ Sources [349 B]
Get:5 copy:/<<BUILDDIR>>/resolver-nr3t9L/apt_archive ./ Packages [429 B]
Fetched 2105 B in 0s (7699 B/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install core build dependencies (apt-based resolver)
----------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
krb5-locales libpam-cap netbase
Use 'apt autoremove' to remove them.
The following NEW packages will be installed:
sbuild-build-depends-core-dummy
0 upgraded, 1 newly installed, 0 to remove and 90 not upgraded.
Need to get 856 B of archives.
After this operation, 0 B of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-nr3t9L/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [856 B]
debconf: delaying package configuration, since apt-utils is not installed
Fetched 856 B in 0s (71.4 kB/s)
Selecting previously unselected package sbuild-build-depends-core-dummy.
(Reading database ... 12958 files and directories currently installed.)
Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_armhf.deb ...
Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ...
Setting up sbuild-build-depends-core-dummy (0.invalid.0) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Check architectures |
+------------------------------------------------------------------------------+
Arch check ok (armhf included in any)
+------------------------------------------------------------------------------+
| Install package build dependencies |
+------------------------------------------------------------------------------+
Setup apt archive
-----------------
Merged Build-Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-cran-digest, r-cran-mass, r-cran-matrix, r-cran-rcpp, r-cran-rcppparallel, r-cran-lifecycle, r-cran-rcppeigen, r-cran-stanheaders, r-cran-bh (>= 1.69.0-1), r-cran-rpf, libboost-system-dev, libsqlite3-dev, libzstd-dev
Filtered Build-Depends: debhelper-compat (= 13), dh-r, r-base-dev, r-cran-digest, r-cran-mass, r-cran-matrix, r-cran-rcpp, r-cran-rcppparallel, r-cran-lifecycle, r-cran-rcppeigen, r-cran-stanheaders, r-cran-bh (>= 1.69.0-1), r-cran-rpf, libboost-system-dev, libsqlite3-dev, libzstd-dev
dpkg-deb: building package 'sbuild-build-depends-r-cran-openmx-dummy' in '/<<BUILDDIR>>/resolver-nr3t9L/apt_archive/sbuild-build-depends-r-cran-openmx-dummy.deb'.
dpkg-scanpackages: warning: Packages in archive but missing from override file:
dpkg-scanpackages: warning: sbuild-build-depends-core-dummy sbuild-build-depends-r-cran-openmx-dummy
dpkg-scanpackages: info: Wrote 2 entries to output Packages file.
gpg: using "Sbuild Signer" as default secret key for signing
Ign:1 copy:/<<BUILDDIR>>/resolver-nr3t9L/apt_archive ./ InRelease
Get:2 copy:/<<BUILDDIR>>/resolver-nr3t9L/apt_archive ./ Release [963 B]
Get:3 copy:/<<BUILDDIR>>/resolver-nr3t9L/apt_archive ./ Release.gpg [370 B]
Get:4 copy:/<<BUILDDIR>>/resolver-nr3t9L/apt_archive ./ Sources [611 B]
Get:5 copy:/<<BUILDDIR>>/resolver-nr3t9L/apt_archive ./ Packages [685 B]
Fetched 2629 B in 0s (12.4 kB/s)
Reading package lists...
W: No sandbox user '_apt' on the system, can not drop privileges
Reading package lists...
Install r-cran-openmx build dependencies (apt-based resolver)
-------------------------------------------------------------
Installing build dependencies
Reading package lists...
Building dependency tree...
Reading state information...
The following packages were automatically installed and are no longer required:
krb5-locales libpam-cap netbase
Use 'apt autoremove' to remove them.
The following additional packages will be installed:
autoconf automake autopoint autotools-dev binutils
binutils-arm-linux-gnueabihf binutils-common bsdextrautils ca-certificates
cpp-12 dctrl-tools debhelper dh-autoreconf dh-r dh-strip-nondeterminism dwz
file fontconfig fontconfig-config fonts-dejavu-core g++-12 gcc-12
gcc-12-base gettext gettext-base gfortran gfortran-12 groff-base
icu-devtools intltool-debian libalgorithm-c3-perl libarchive-zip-perl
libasan8 libatomic1 libb-hooks-endofscope-perl libb-hooks-op-check-perl
libbinutils libblas-dev libblas3 libboost-dev libboost-system-dev
libboost-system1.74-dev libboost-system1.74.0 libboost1.74-dev libbrotli1
libbsd0 libbz2-dev libcairo2 libcc1-0 libclass-c3-perl libclass-load-perl
libclass-load-xs-perl libclone-perl libctf-nobfd0 libctf0 libcurl3-gnutls
libcurl4 libdata-optlist-perl libdatrie1 libdebhelper-perl libdeflate0
libdevel-callchecker-perl libdevel-globaldestruction-perl
libdevel-overloadinfo-perl libdevel-stacktrace-perl
libdist-checkconflicts-perl libdynaloader-functions-perl libelf1
libencode-locale-perl libeval-closure-perl libexpat1
libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1
libfreetype6 libfribidi0 libgcc-12-dev libgcc-s1 libgfortran-12-dev
libgfortran5 libglib2.0-0 libgomp1 libgraphite2-3 libharfbuzz0b
libhttp-date-perl libhttp-message-perl libhwloc15 libice6 libicu-dev
libicu72 libio-html-perl libjbig0 libjpeg-dev libjpeg62-turbo
libjpeg62-turbo-dev liblapack-dev liblapack3 liblerc4 liblwp-mediatypes-perl
liblzma-dev liblzma5 libmagic-mgc libmagic1 libmd0
libmodule-implementation-perl libmodule-runtime-conflicts-perl
libmodule-runtime-perl libmoose-perl libmro-compat-perl
libnamespace-clean-perl libncurses-dev libncurses5-dev libncurses6
libncursesw6 libnghttp2-14 libpackage-deprecationmanager-perl
libpackage-stash-perl libpackage-stash-xs-perl libpango-1.0-0
libpangocairo-1.0-0 libpangoft2-1.0-0 libpaper-utils libpaper1
libparams-classify-perl libparams-util-perl libpcre16-3 libpcre2-16-0
libpcre2-32-0 libpcre2-8-0 libpcre2-dev libpcre2-posix3 libpcre3
libpcre3-dev libpcre32-3 libpcrecpp0v5 libperl5.36 libpipeline1
libpixman-1-0 libpkgconf3 libpng-dev libpng16-16 libpsl5 libreadline-dev
libreadline8 libregexp-ipv6-perl librtmp1 libsm6 libsqlite3-0 libsqlite3-dev
libssh2-1 libssl3 libstdc++-12-dev libstdc++6 libsub-exporter-perl
libsub-exporter-progressive-perl libsub-identify-perl libsub-install-perl
libsub-name-perl libsub-override-perl libswitch-perl libtbb-dev libtbb12
libtbbbind-2-5 libtbbmalloc2 libtcl8.6 libthai-data libthai0 libtiff6
libtimedate-perl libtinfo6 libtk8.6 libtool libtry-tiny-perl libubsan1
libuchardet0 liburi-perl libvariable-magic-perl libwebp7 libwww-curl-perl
libwww-curl-simple-perl libx11-6 libx11-data libxau6 libxcb-render0
libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxmuu1 libxrender1
libxss1 libxt6 libzstd-dev libzstd1 littler m4 man-db ncurses-base
ncurses-bin openssl perl perl-base perl-modules-5.36 pkg-config pkgconf
pkgconf-bin po-debconf r-base-core r-base-dev r-cran-bh r-cran-cli
r-cran-digest r-cran-glue r-cran-lattice r-cran-lifecycle r-cran-littler
r-cran-mass r-cran-matrix r-cran-mvtnorm r-cran-pkgkitten r-cran-rcpp
r-cran-rcppeigen r-cran-rcppparallel r-cran-rlang r-cran-rpf
r-cran-stanheaders readline-common ucf unzip x11-common xauth xdg-utils
xz-utils zip zlib1g-dev
Suggested packages:
autoconf-archive gnu-standards autoconf-doc binutils-doc gcc-12-locales
cpp-12-doc debtags dh-make postgresql-client-common gcc-12-doc gettext-doc
libasprintf-dev libgettextpo-dev gfortran-doc gfortran-12-doc
libcoarrays-dev groff liblapack-doc libboost-doc libboost1.74-doc
libboost-atomic1.74-dev libboost-chrono1.74-dev libboost-container1.74-dev
libboost-context1.74-dev libboost-contract1.74-dev
libboost-coroutine1.74-dev libboost-date-time1.74-dev
libboost-exception1.74-dev libboost-fiber1.74-dev
libboost-filesystem1.74-dev libboost-graph1.74-dev
libboost-graph-parallel1.74-dev libboost-iostreams1.74-dev
libboost-locale1.74-dev libboost-log1.74-dev libboost-math1.74-dev
libboost-mpi1.74-dev libboost-mpi-python1.74-dev libboost-numpy1.74-dev
libboost-program-options1.74-dev libboost-python1.74-dev
libboost-random1.74-dev libboost-regex1.74-dev
libboost-serialization1.74-dev libboost-stacktrace1.74-dev
libboost-test1.74-dev libboost-thread1.74-dev libboost-timer1.74-dev
libboost-type-erasure1.74-dev libboost-wave1.74-dev libboost1.74-tools-dev
libmpfrc++-dev libntl-dev libboost-nowide1.74-dev low-memory-monitor icu-doc
liblzma-doc ncurses-doc libscalar-number-perl readline-doc sqlite3-doc
libstdc++-12-doc libtbb-doc tcl8.6 tk8.6 libtool-doc gcj-jdk
libbusiness-isbn-perl libwww-perl libcurl4-gnutls-dev m4-doc apparmor less
www-browser perl-doc libterm-readline-gnu-perl | libterm-readline-perl-perl
libtap-harness-archive-perl libmail-box-perl elpa-ess r-doc-info | r-doc-pdf
r-mathlib r-base-html texlive-base texlive-latex-base texlive-plain-generic
texlive-fonts-recommended texlive-fonts-extra texlive-extra-utils
texlive-latex-recommended texlive-latex-extra texinfo r-cran-callr
r-cran-covr r-cran-crayon r-cran-htmltools r-cran-htmlwidgets r-cran-knitr
r-cran-processx r-cran-ps r-cran-rmarkdown r-cran-rprojroot
r-cran-rstudioapi r-cran-tibble r-cran-whoami r-cran-dbi r-cran-dplyr
r-cran-forcats r-cran-ggplot2 r-cran-magrittr r-cran-r.utils r-cran-rsqlite
r-cran-stringr r-cran-waldo r-cran-withr r-cran-lintr r-cran-tidyverse
r-cran-vctrs r-cran-getopt r-cran-inline r-cran-fs r-cran-pillar
r-cran-testthat r-cran-usethis r-cran-roxygen2 r-cran-reshape2
r-cran-gridextra r-cran-markdown r-cran-rstan
Recommended packages:
devscripts cme git-buildpackage curl | wget | lynx bzip2-doc
libclass-c3-xs-perl libdevel-lexalias-perl libarchive-cpio-perl
libglib2.0-data shared-mime-info xdg-user-dirs libhwloc-plugins
libdevel-partialdump-perl libgpm2 libpng-tools publicsuffix libltdl-dev
libmail-sendmail-perl r-recommended r-doc-html r-cran-testthat r-cran-withr
r-cran-mockery r-cran-vctrs r-cran-runit r-cran-rmarkdown r-cran-numderiv
libfile-mimeinfo-perl libnet-dbus-perl libx11-protocol-perl x11-utils
x11-xserver-utils
The following NEW packages will be installed:
autoconf automake autopoint autotools-dev bsdextrautils ca-certificates
dctrl-tools debhelper dh-autoreconf dh-r dh-strip-nondeterminism dwz file
fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base gfortran
gfortran-12 groff-base icu-devtools intltool-debian libalgorithm-c3-perl
libarchive-zip-perl libb-hooks-endofscope-perl libb-hooks-op-check-perl
libblas-dev libblas3 libboost-dev libboost-system-dev
libboost-system1.74-dev libboost-system1.74.0 libboost1.74-dev libbrotli1
libbsd0 libbz2-dev libcairo2 libclass-c3-perl libclass-load-perl
libclass-load-xs-perl libclone-perl libcurl3-gnutls libcurl4
libdata-optlist-perl libdatrie1 libdebhelper-perl libdeflate0
libdevel-callchecker-perl libdevel-globaldestruction-perl
libdevel-overloadinfo-perl libdevel-stacktrace-perl
libdist-checkconflicts-perl libdynaloader-functions-perl libelf1
libencode-locale-perl libeval-closure-perl libexpat1
libfile-stripnondeterminism-perl libfile-which-perl libfontconfig1
libfreetype6 libfribidi0 libgfortran-12-dev libgfortran5 libglib2.0-0
libgraphite2-3 libharfbuzz0b libhttp-date-perl libhttp-message-perl
libhwloc15 libice6 libicu-dev libicu72 libio-html-perl libjbig0 libjpeg-dev
libjpeg62-turbo libjpeg62-turbo-dev liblapack-dev liblapack3 liblerc4
liblwp-mediatypes-perl liblzma-dev libmagic-mgc libmagic1 libmd0
libmodule-implementation-perl libmodule-runtime-conflicts-perl
libmodule-runtime-perl libmoose-perl libmro-compat-perl
libnamespace-clean-perl libncurses-dev libncurses5-dev libncurses6
libnghttp2-14 libpackage-deprecationmanager-perl libpackage-stash-perl
libpackage-stash-xs-perl libpango-1.0-0 libpangocairo-1.0-0
libpangoft2-1.0-0 libpaper-utils libpaper1 libparams-classify-perl
libparams-util-perl libpcre16-3 libpcre2-16-0 libpcre2-32-0 libpcre2-dev
libpcre2-posix3 libpcre3-dev libpcre32-3 libpcrecpp0v5 libpipeline1
libpixman-1-0 libpkgconf3 libpng-dev libpng16-16 libpsl5 libreadline-dev
libregexp-ipv6-perl librtmp1 libsm6 libsqlite3-dev libssh2-1
libsub-exporter-perl libsub-exporter-progressive-perl libsub-identify-perl
libsub-install-perl libsub-name-perl libsub-override-perl libswitch-perl
libtbb-dev libtbb12 libtbbbind-2-5 libtbbmalloc2 libtcl8.6 libthai-data
libthai0 libtiff6 libtimedate-perl libtk8.6 libtool libtry-tiny-perl
libuchardet0 liburi-perl libvariable-magic-perl libwebp7 libwww-curl-perl
libwww-curl-simple-perl libx11-6 libx11-data libxau6 libxcb-render0
libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxft2 libxml2 libxmuu1 libxrender1
libxss1 libxt6 libzstd-dev littler m4 man-db openssl pkg-config pkgconf
pkgconf-bin po-debconf r-base-core r-base-dev r-cran-bh r-cran-cli
r-cran-digest r-cran-glue r-cran-lattice r-cran-lifecycle r-cran-littler
r-cran-mass r-cran-matrix r-cran-mvtnorm r-cran-pkgkitten r-cran-rcpp
r-cran-rcppeigen r-cran-rcppparallel r-cran-rlang r-cran-rpf
r-cran-stanheaders sbuild-build-depends-r-cran-openmx-dummy ucf unzip
x11-common xauth xdg-utils zip zlib1g-dev
The following packages will be upgraded:
binutils binutils-arm-linux-gnueabihf binutils-common cpp-12 g++-12 gcc-12
gcc-12-base libasan8 libatomic1 libbinutils libcc1-0 libctf-nobfd0 libctf0
libgcc-12-dev libgcc-s1 libgomp1 liblzma5 libncursesw6 libpcre2-8-0 libpcre3
libperl5.36 libreadline8 libsqlite3-0 libssl3 libstdc++-12-dev libstdc++6
libtinfo6 libubsan1 libzstd1 ncurses-base ncurses-bin perl perl-base
perl-modules-5.36 readline-common xz-utils
36 upgraded, 202 newly installed, 0 to remove and 54 not upgraded.
Need to get 169 MB of archives.
After this operation, 467 MB of additional disk space will be used.
Get:1 copy:/<<BUILDDIR>>/resolver-nr3t9L/apt_archive ./ sbuild-build-depends-r-cran-openmx-dummy 0.invalid.0 [976 B]
Get:2 http://172.17.4.1/private bookworm-staging/main armhf ncurses-bin armhf 6.4-2 [414 kB]
Get:3 http://172.17.4.1/private bookworm-staging/main armhf libperl5.36 armhf 5.36.0-7 [3462 kB]
Get:4 http://172.17.4.1/private bookworm-staging/main armhf perl armhf 5.36.0-7 [239 kB]
Get:5 http://172.17.4.1/private bookworm-staging/main armhf perl-base armhf 5.36.0-7 [1413 kB]
Get:6 http://172.17.4.1/private bookworm-staging/main armhf perl-modules-5.36 all 5.36.0-7 [2815 kB]
Get:7 http://172.17.4.1/private bookworm-staging/main armhf ncurses-base all 6.4-2 [261 kB]
Get:8 http://172.17.4.1/private bookworm-staging/main armhf readline-common all 8.2-1.3 [69.0 kB]
Get:9 http://172.17.4.1/private bookworm-staging/main armhf libubsan1 armhf 12.2.0-14+rpi1 [861 kB]
Get:10 http://172.17.4.1/private bookworm-staging/main armhf gcc-12-base armhf 12.2.0-14+rpi1 [37.7 kB]
Get:11 http://172.17.4.1/private bookworm-staging/main armhf libstdc++6 armhf 12.2.0-14+rpi1 [504 kB]
Get:12 http://172.17.4.1/private bookworm-staging/main armhf libgomp1 armhf 12.2.0-14+rpi1 [95.4 kB]
Get:13 http://172.17.4.1/private bookworm-staging/main armhf libatomic1 armhf 12.2.0-14+rpi1 [8240 B]
Get:14 http://172.17.4.1/private bookworm-staging/main armhf libasan8 armhf 12.2.0-14+rpi1 [2088 kB]
Get:15 http://172.17.4.1/private bookworm-staging/main armhf cpp-12 armhf 12.2.0-14+rpi1 [7159 kB]
Get:16 http://172.17.4.1/private bookworm-staging/main armhf libcc1-0 armhf 12.2.0-14+rpi1 [32.2 kB]
Get:17 http://172.17.4.1/private bookworm-staging/main armhf libctf0 armhf 2.39.90.20221231-1+rpi1 [71.5 kB]
Get:18 http://172.17.4.1/private bookworm-staging/main armhf libctf-nobfd0 armhf 2.39.90.20221231-1+rpi1 [133 kB]
Get:19 http://172.17.4.1/private bookworm-staging/main armhf binutils-arm-linux-gnueabihf armhf 2.39.90.20221231-1+rpi1 [2069 kB]
Get:20 http://172.17.4.1/private bookworm-staging/main armhf libbinutils armhf 2.39.90.20221231-1+rpi1 [407 kB]
Get:21 http://172.17.4.1/private bookworm-staging/main armhf binutils-common armhf 2.39.90.20221231-1+rpi1 [2354 kB]
Get:22 http://172.17.4.1/private bookworm-staging/main armhf binutils armhf 2.39.90.20221231-1+rpi1 [64.9 kB]
Get:23 http://172.17.4.1/private bookworm-staging/main armhf g++-12 armhf 12.2.0-14+rpi1 [7914 kB]
Get:24 http://172.17.4.1/private bookworm-staging/main armhf gcc-12 armhf 12.2.0-14+rpi1 [14.2 MB]
Get:25 http://172.17.4.1/private bookworm-staging/main armhf libgcc-12-dev armhf 12.2.0-14+rpi1 [727 kB]
Get:26 http://172.17.4.1/private bookworm-staging/main armhf libstdc++-12-dev armhf 12.2.0-14+rpi1 [2027 kB]
Get:27 http://172.17.4.1/private bookworm-staging/main armhf libgcc-s1 armhf 12.2.0-14+rpi1 [36.3 kB]
Get:28 http://172.17.4.1/private bookworm-staging/main armhf libzstd1 armhf 1.5.2+dfsg2-3 [244 kB]
Get:29 http://172.17.4.1/private bookworm-staging/main armhf liblzma5 armhf 5.4.1-0.0 [192 kB]
Get:30 http://172.17.4.1/private bookworm-staging/main armhf libtinfo6 armhf 6.4-2 [317 kB]
Get:31 http://172.17.4.1/private bookworm-staging/main armhf libncursesw6 armhf 6.4-2 [106 kB]
Get:32 http://172.17.4.1/private bookworm-staging/main armhf libpcre2-8-0 armhf 10.42-1 [225 kB]
Get:33 http://172.17.4.1/private bookworm-staging/main armhf libreadline8 armhf 8.2-1.3 [142 kB]
Get:34 http://172.17.4.1/private bookworm-staging/main armhf libsqlite3-0 armhf 3.40.1-1 [724 kB]
Get:35 http://172.17.4.1/private bookworm-staging/main armhf libuchardet0 armhf 0.0.7-1 [65.0 kB]
Get:36 http://172.17.4.1/private bookworm-staging/main armhf groff-base armhf 1.22.4-9 [774 kB]
Get:37 http://172.17.4.1/private bookworm-staging/main armhf bsdextrautils armhf 2.38.1-4 [78.8 kB]
Get:38 http://172.17.4.1/private bookworm-staging/main armhf libpipeline1 armhf 1.5.7-1 [33.4 kB]
Get:39 http://172.17.4.1/private bookworm-staging/main armhf man-db armhf 2.11.2-1 [1342 kB]
Get:40 http://172.17.4.1/private bookworm-staging/main armhf libssl3 armhf 3.0.7-2 [1614 kB]
Get:41 http://172.17.4.1/private bookworm-staging/main armhf openssl armhf 3.0.7-2 [1349 kB]
Get:42 http://172.17.4.1/private bookworm-staging/main armhf ca-certificates all 20211016 [156 kB]
Get:43 http://172.17.4.1/private bookworm-staging/main armhf libmagic-mgc armhf 1:5.44-3 [305 kB]
Get:44 http://172.17.4.1/private bookworm-staging/main armhf libmagic1 armhf 1:5.44-3 [95.3 kB]
Get:45 http://172.17.4.1/private bookworm-staging/main armhf file armhf 1:5.44-3 [41.5 kB]
Get:46 http://172.17.4.1/private bookworm-staging/main armhf gettext-base armhf 0.21-10 [156 kB]
Get:47 http://172.17.4.1/private bookworm-staging/main armhf ucf all 3.0043 [74.0 kB]
Get:48 http://172.17.4.1/private bookworm-staging/main armhf xz-utils armhf 5.4.1-0.0 [435 kB]
Get:49 http://172.17.4.1/private bookworm-staging/main armhf m4 armhf 1.4.19-2 [256 kB]
Get:50 http://172.17.4.1/private bookworm-staging/main armhf autoconf all 2.71-3 [332 kB]
Get:51 http://172.17.4.1/private bookworm-staging/main armhf autotools-dev all 20220109.1 [51.6 kB]
Get:52 http://172.17.4.1/private bookworm-staging/main armhf automake all 1:1.16.5-1.3 [823 kB]
Get:53 http://172.17.4.1/private bookworm-staging/main armhf autopoint all 0.21-10 [495 kB]
Get:54 http://172.17.4.1/private bookworm-staging/main armhf dctrl-tools armhf 2.24-3 [94.2 kB]
Get:55 http://172.17.4.1/private bookworm-staging/main armhf libdebhelper-perl all 13.11.4 [81.2 kB]
Get:56 http://172.17.4.1/private bookworm-staging/main armhf libtool all 2.4.7-5 [517 kB]
Get:57 http://172.17.4.1/private bookworm-staging/main armhf dh-autoreconf all 20 [17.1 kB]
Get:58 http://172.17.4.1/private bookworm-staging/main armhf libarchive-zip-perl all 1.68-1 [104 kB]
Get:59 http://172.17.4.1/private bookworm-staging/main armhf libsub-override-perl all 0.09-4 [9304 B]
Get:60 http://172.17.4.1/private bookworm-staging/main armhf libfile-stripnondeterminism-perl all 1.13.1-1 [19.4 kB]
Get:61 http://172.17.4.1/private bookworm-staging/main armhf dh-strip-nondeterminism all 1.13.1-1 [8620 B]
Get:62 http://172.17.4.1/private bookworm-staging/main armhf libelf1 armhf 0.187-2+rpi2 [177 kB]
Get:63 http://172.17.4.1/private bookworm-staging/main armhf dwz armhf 0.15-1 [92.4 kB]
Get:64 http://172.17.4.1/private bookworm-staging/main armhf libicu72 armhf 72.1-3 [9009 kB]
Get:65 http://172.17.4.1/private bookworm-staging/main armhf libxml2 armhf 2.9.14+dfsg-1.1+b1 [571 kB]
Get:66 http://172.17.4.1/private bookworm-staging/main armhf gettext armhf 0.21-10 [1203 kB]
Get:67 http://172.17.4.1/private bookworm-staging/main armhf intltool-debian all 0.35.0+20060710.6 [22.9 kB]
Get:68 http://172.17.4.1/private bookworm-staging/main armhf po-debconf all 1.0.21+nmu1 [248 kB]
Get:69 http://172.17.4.1/private bookworm-staging/main armhf debhelper all 13.11.4 [942 kB]
Get:70 http://172.17.4.1/private bookworm-staging/main armhf zip armhf 3.0-12 [209 kB]
Get:71 http://172.17.4.1/private bookworm-staging/main armhf unzip armhf 6.0-27 [152 kB]
Get:72 http://172.17.4.1/private bookworm-staging/main armhf libpaper1 armhf 1.1.28 [20.5 kB]
Get:73 http://172.17.4.1/private bookworm-staging/main armhf libpaper-utils armhf 1.1.28 [17.7 kB]
Get:74 http://172.17.4.1/private bookworm-staging/main armhf xdg-utils all 1.1.3-4.1 [75.5 kB]
Get:75 http://172.17.4.1/private bookworm-staging/main armhf libblas3 armhf 3.11.0-2 [100.0 kB]
Get:76 http://172.17.4.1/private bookworm-staging/main armhf libexpat1 armhf 2.5.0-1 [77.2 kB]
Get:77 http://172.17.4.1/private bookworm-staging/main armhf libbrotli1 armhf 1.0.9-2+b3 [258 kB]
Get:78 http://172.17.4.1/private bookworm-staging/main armhf libpng16-16 armhf 1.6.39-2 [258 kB]
Get:79 http://172.17.4.1/private bookworm-staging/main armhf libfreetype6 armhf 2.12.1+dfsg-4 [329 kB]
Get:80 http://172.17.4.1/private bookworm-staging/main armhf fonts-dejavu-core all 2.37-2 [1069 kB]
Get:81 http://172.17.4.1/private bookworm-staging/main armhf fontconfig-config armhf 2.14.1-3 [315 kB]
Get:82 http://172.17.4.1/private bookworm-staging/main armhf libfontconfig1 armhf 2.14.1-3 [366 kB]
Get:83 http://172.17.4.1/private bookworm-staging/main armhf libpixman-1-0 armhf 0.42.2-1 [461 kB]
Get:84 http://172.17.4.1/private bookworm-staging/main armhf libxau6 armhf 1:1.0.9-1 [19.1 kB]
Get:85 http://172.17.4.1/private bookworm-staging/main armhf libmd0 armhf 1.0.4-2 [28.6 kB]
Get:86 http://172.17.4.1/private bookworm-staging/main armhf libbsd0 armhf 0.11.7-2 [112 kB]
Get:87 http://172.17.4.1/private bookworm-staging/main armhf libxdmcp6 armhf 1:1.1.2-3 [25.0 kB]
Get:88 http://172.17.4.1/private bookworm-staging/main armhf libxcb1 armhf 1.15-1 [139 kB]
Get:89 http://172.17.4.1/private bookworm-staging/main armhf libx11-data all 2:1.8.3-3 [292 kB]
Get:90 http://172.17.4.1/private bookworm-staging/main armhf libx11-6 armhf 2:1.8.3-3 [687 kB]
Get:91 http://172.17.4.1/private bookworm-staging/main armhf libxcb-render0 armhf 1.15-1 [114 kB]
Get:92 http://172.17.4.1/private bookworm-staging/main armhf libxcb-shm0 armhf 1.15-1 [106 kB]
Get:93 http://172.17.4.1/private bookworm-staging/main armhf libxext6 armhf 2:1.3.4-1 [48.0 kB]
Get:94 http://172.17.4.1/private bookworm-staging/main armhf libxrender1 armhf 1:0.9.10-1.1 [30.0 kB]
Get:95 http://172.17.4.1/private bookworm-staging/main armhf libcairo2 armhf 1.16.0-7 [482 kB]
Get:96 http://172.17.4.1/private bookworm-staging/main armhf libnghttp2-14 armhf 1.51.0-1 [60.5 kB]
Get:97 http://172.17.4.1/private bookworm-staging/main armhf libpsl5 armhf 0.21.0-1.2 [56.2 kB]
Get:98 http://172.17.4.1/private bookworm-staging/main armhf librtmp1 armhf 2.4+20151223.gitfa8646d.1-2+b2 [54.2 kB]
Get:99 http://172.17.4.1/private bookworm-staging/main armhf libssh2-1 armhf 1.10.0-3+b1 [161 kB]
Get:100 http://172.17.4.1/private bookworm-staging/main armhf libcurl4 armhf 7.87.0-2 [332 kB]
Get:101 http://172.17.4.1/private bookworm-staging/main armhf libglib2.0-0 armhf 2.74.5-1 [1204 kB]
Get:102 http://172.17.4.1/private bookworm-staging/main armhf libjpeg62-turbo armhf 1:2.1.2-1 [144 kB]
Get:103 http://172.17.4.1/private bookworm-staging/main armhf libgfortran5 armhf 12.2.0-14+rpi1 [238 kB]
Get:104 http://172.17.4.1/private bookworm-staging/main armhf liblapack3 armhf 3.11.0-2 [1624 kB]
Get:105 http://172.17.4.1/private bookworm-staging/main armhf fontconfig armhf 2.14.1-3 [449 kB]
Get:106 http://172.17.4.1/private bookworm-staging/main armhf libfribidi0 armhf 1.0.8-2.1 [63.7 kB]
Get:107 http://172.17.4.1/private bookworm-staging/main armhf libgraphite2-3 armhf 1.3.14-1 [70.3 kB]
Get:108 http://172.17.4.1/private bookworm-staging/main armhf libharfbuzz0b armhf 6.0.0-1 [1886 kB]
Get:109 http://172.17.4.1/private bookworm-staging/main armhf libthai-data all 0.1.29-1 [176 kB]
Get:110 http://172.17.4.1/private bookworm-staging/main armhf libdatrie1 armhf 0.2.13-2+b2 [39.9 kB]
Get:111 http://172.17.4.1/private bookworm-staging/main armhf libthai0 armhf 0.1.29-1 [54.5 kB]
Get:112 http://172.17.4.1/private bookworm-staging/main armhf libpango-1.0-0 armhf 1.50.12+ds-1 [186 kB]
Get:113 http://172.17.4.1/private bookworm-staging/main armhf libpangoft2-1.0-0 armhf 1.50.12+ds-1 [40.5 kB]
Get:114 http://172.17.4.1/private bookworm-staging/main armhf libpangocairo-1.0-0 armhf 1.50.12+ds-1 [30.1 kB]
Get:115 http://172.17.4.1/private bookworm-staging/main armhf libtcl8.6 armhf 8.6.13+dfsg-1 [906 kB]
Get:116 http://172.17.4.1/private bookworm-staging/main armhf libdeflate0 armhf 1.14-1 [50.9 kB]
Get:117 http://172.17.4.1/private bookworm-staging/main armhf libjbig0 armhf 2.1-6.1 [27.0 kB]
Get:118 http://172.17.4.1/private bookworm-staging/main armhf liblerc4 armhf 4.0.0+ds-2 [133 kB]
Get:119 http://172.17.4.1/private bookworm-staging/main armhf libwebp7 armhf 1.2.4-0.1 [242 kB]
Get:120 http://172.17.4.1/private bookworm-staging/main armhf libtiff6 armhf 4.5.0-4 [292 kB]
Get:121 http://172.17.4.1/private bookworm-staging/main armhf libxft2 armhf 2.3.6-1 [53.7 kB]
Get:122 http://172.17.4.1/private bookworm-staging/main armhf x11-common all 1:7.7+23 [252 kB]
Get:123 http://172.17.4.1/private bookworm-staging/main armhf libxss1 armhf 1:1.2.3-1 [17.3 kB]
Get:124 http://172.17.4.1/private bookworm-staging/main armhf libtk8.6 armhf 8.6.13-1 [680 kB]
Get:125 http://172.17.4.1/private bookworm-staging/main armhf libice6 armhf 2:1.0.10-1 [51.7 kB]
Get:126 http://172.17.4.1/private bookworm-staging/main armhf libsm6 armhf 2:1.2.3-1 [32.9 kB]
Get:127 http://172.17.4.1/private bookworm-staging/main armhf libxt6 armhf 1:1.2.1-1 [159 kB]
Get:128 http://172.17.4.1/private bookworm-staging/main armhf r-base-core armhf 4.2.2.20221110-2 [25.6 MB]
Get:129 http://172.17.4.1/private bookworm-staging/main armhf libgfortran-12-dev armhf 12.2.0-14+rpi1 [285 kB]
Get:130 http://172.17.4.1/private bookworm-staging/main armhf gfortran-12 armhf 12.2.0-14+rpi1 [7509 kB]
Get:131 http://172.17.4.1/private bookworm-staging/main armhf gfortran armhf 4:12.2.0-1+rpi1 [1432 B]
Get:132 http://172.17.4.1/private bookworm-staging/main armhf libblas-dev armhf 3.11.0-2 [106 kB]
Get:133 http://172.17.4.1/private bookworm-staging/main armhf liblapack-dev armhf 3.11.0-2 [3007 kB]
Get:134 http://172.17.4.1/private bookworm-staging/main armhf libncurses6 armhf 6.4-2 [80.2 kB]
Get:135 http://172.17.4.1/private bookworm-staging/main armhf libncurses-dev armhf 6.4-2 [291 kB]
Get:136 http://172.17.4.1/private bookworm-staging/main armhf libncurses5-dev armhf 6.4-2 [932 B]
Get:137 http://172.17.4.1/private bookworm-staging/main armhf libreadline-dev armhf 8.2-1.3 [123 kB]
Get:138 http://172.17.4.1/private bookworm-staging/main armhf libjpeg62-turbo-dev armhf 1:2.1.2-1 [261 kB]
Get:139 http://172.17.4.1/private bookworm-staging/main armhf libjpeg-dev armhf 1:2.1.2-1 [74.7 kB]
Get:140 http://172.17.4.1/private bookworm-staging/main armhf libpcre2-16-0 armhf 10.42-1 [210 kB]
Get:141 http://172.17.4.1/private bookworm-staging/main armhf libpcre2-32-0 armhf 10.42-1 [201 kB]
Get:142 http://172.17.4.1/private bookworm-staging/main armhf libpcre2-posix3 armhf 10.42-1 [55.1 kB]
Get:143 http://172.17.4.1/private bookworm-staging/main armhf libpcre2-dev armhf 10.42-1 [648 kB]
Get:144 http://172.17.4.1/private bookworm-staging/main armhf libpcre3 armhf 2:8.39-15 [313 kB]
Get:145 http://172.17.4.1/private bookworm-staging/main armhf libpcre16-3 armhf 2:8.39-15 [234 kB]
Get:146 http://172.17.4.1/private bookworm-staging/main armhf libpcre32-3 armhf 2:8.39-15 [225 kB]
Get:147 http://172.17.4.1/private bookworm-staging/main armhf libpcrecpp0v5 armhf 2:8.39-15 [141 kB]
Get:148 http://172.17.4.1/private bookworm-staging/main armhf libpcre3-dev armhf 2:8.39-15 [576 kB]
Get:149 http://172.17.4.1/private bookworm-staging/main armhf zlib1g-dev armhf 1:1.2.13.dfsg-1 [901 kB]
Get:150 http://172.17.4.1/private bookworm-staging/main armhf libpng-dev armhf 1.6.39-2 [336 kB]
Get:151 http://172.17.4.1/private bookworm-staging/main armhf libbz2-dev armhf 1.0.8-5+b2 [26.8 kB]
Get:152 http://172.17.4.1/private bookworm-staging/main armhf liblzma-dev armhf 5.4.1-0.0 [247 kB]
Get:153 http://172.17.4.1/private bookworm-staging/main armhf icu-devtools armhf 72.1-3 [175 kB]
Get:154 http://172.17.4.1/private bookworm-staging/main armhf libicu-dev armhf 72.1-3 [9959 kB]
Get:155 http://172.17.4.1/private bookworm-staging/main armhf libxmuu1 armhf 2:1.1.3-3 [23.3 kB]
Get:156 http://172.17.4.1/private bookworm-staging/main armhf xauth armhf 1:1.1.2-1 [32.4 kB]
Get:157 http://172.17.4.1/private bookworm-staging/main armhf libpkgconf3 armhf 1.8.1-1 [31.3 kB]
Get:158 http://172.17.4.1/private bookworm-staging/main armhf pkgconf-bin armhf 1.8.1-1 [27.8 kB]
Get:159 http://172.17.4.1/private bookworm-staging/main armhf pkgconf armhf 1.8.1-1 [25.9 kB]
Get:160 http://172.17.4.1/private bookworm-staging/main armhf pkg-config armhf 1.8.1-1 [13.7 kB]
Get:161 http://172.17.4.1/private bookworm-staging/main armhf r-base-dev all 4.2.2.20221110-2 [4492 B]
Get:162 http://172.17.4.1/private bookworm-staging/main armhf libfile-which-perl all 1.27-2 [15.1 kB]
Get:163 http://172.17.4.1/private bookworm-staging/main armhf libswitch-perl all 2.17-3 [20.3 kB]
Get:164 http://172.17.4.1/private bookworm-staging/main armhf libclone-perl armhf 0.46-1 [13.2 kB]
Get:165 http://172.17.4.1/private bookworm-staging/main armhf libencode-locale-perl all 1.05-3 [12.9 kB]
Get:166 http://172.17.4.1/private bookworm-staging/main armhf libtimedate-perl all 2.3300-2 [39.3 kB]
Get:167 http://172.17.4.1/private bookworm-staging/main armhf libhttp-date-perl all 6.05-2 [10.5 kB]
Get:168 http://172.17.4.1/private bookworm-staging/main armhf libio-html-perl all 1.004-3 [16.2 kB]
Get:169 http://172.17.4.1/private bookworm-staging/main armhf liblwp-mediatypes-perl all 6.04-2 [20.2 kB]
Get:170 http://172.17.4.1/private bookworm-staging/main armhf libregexp-ipv6-perl all 0.03-3 [5212 B]
Get:171 http://172.17.4.1/private bookworm-staging/main armhf liburi-perl all 5.17-1 [90.4 kB]
Get:172 http://172.17.4.1/private bookworm-staging/main armhf libhttp-message-perl all 6.44-1 [81.7 kB]
Get:173 http://172.17.4.1/private bookworm-staging/main armhf libparams-util-perl armhf 1.102-2+b1 [23.9 kB]
Get:174 http://172.17.4.1/private bookworm-staging/main armhf libsub-install-perl all 0.929-1 [10.5 kB]
Get:175 http://172.17.4.1/private bookworm-staging/main armhf libdata-optlist-perl all 0.113-1 [10.6 kB]
Get:176 http://172.17.4.1/private bookworm-staging/main armhf libb-hooks-op-check-perl armhf 0.22-2+b1 [10.3 kB]
Get:177 http://172.17.4.1/private bookworm-staging/main armhf libdynaloader-functions-perl all 0.003-3 [12.7 kB]
Get:178 http://172.17.4.1/private bookworm-staging/main armhf libdevel-callchecker-perl armhf 0.008-2 [15.8 kB]
Get:179 http://172.17.4.1/private bookworm-staging/main armhf libparams-classify-perl armhf 0.015-2+b1 [22.0 kB]
Get:180 http://172.17.4.1/private bookworm-staging/main armhf libmodule-runtime-perl all 0.016-2 [19.6 kB]
Get:181 http://172.17.4.1/private bookworm-staging/main armhf libtry-tiny-perl all 0.31-2 [22.6 kB]
Get:182 http://172.17.4.1/private bookworm-staging/main armhf libmodule-implementation-perl all 0.09-2 [12.6 kB]
Get:183 http://172.17.4.1/private bookworm-staging/main armhf libpackage-stash-perl all 0.40-1 [22.0 kB]
Get:184 http://172.17.4.1/private bookworm-staging/main armhf libclass-load-perl all 0.25-2 [15.3 kB]
Get:185 http://172.17.4.1/private bookworm-staging/main armhf libclass-load-xs-perl armhf 0.10-2+b1 [13.8 kB]
Get:186 http://172.17.4.1/private bookworm-staging/main armhf libsub-exporter-progressive-perl all 0.001013-3 [7496 B]
Get:187 http://172.17.4.1/private bookworm-staging/main armhf libdevel-globaldestruction-perl all 0.14-4 [7144 B]
Get:188 http://172.17.4.1/private bookworm-staging/main armhf libalgorithm-c3-perl all 0.11-2 [10.8 kB]
Get:189 http://172.17.4.1/private bookworm-staging/main armhf libclass-c3-perl all 0.35-2 [21.0 kB]
Get:190 http://172.17.4.1/private bookworm-staging/main armhf libmro-compat-perl all 0.15-2 [11.8 kB]
Get:191 http://172.17.4.1/private bookworm-staging/main armhf libdevel-overloadinfo-perl all 0.007-1 [7896 B]
Get:192 http://172.17.4.1/private bookworm-staging/main armhf libdevel-stacktrace-perl all 2.0400-2 [26.8 kB]
Get:193 http://172.17.4.1/private bookworm-staging/main armhf libsub-exporter-perl all 0.989-1 [50.5 kB]
Get:194 http://172.17.4.1/private bookworm-staging/main armhf libeval-closure-perl all 0.14-3 [11.2 kB]
Get:195 http://172.17.4.1/private bookworm-staging/main armhf libdist-checkconflicts-perl all 0.11-2 [10.5 kB]
Get:196 http://172.17.4.1/private bookworm-staging/main armhf libmodule-runtime-conflicts-perl all 0.003-2 [7356 B]
Get:197 http://172.17.4.1/private bookworm-staging/main armhf libsub-name-perl armhf 0.26-2+b1 [12.2 kB]
Get:198 http://172.17.4.1/private bookworm-staging/main armhf libpackage-deprecationmanager-perl all 0.17-2 [16.8 kB]
Get:199 http://172.17.4.1/private bookworm-staging/main armhf libpackage-stash-xs-perl armhf 0.30-1+b1 [18.2 kB]
Get:200 http://172.17.4.1/private bookworm-staging/main armhf libmoose-perl armhf 2.2202-1 [793 kB]
Get:201 http://172.17.4.1/private bookworm-staging/main armhf libvariable-magic-perl armhf 0.63-1+b1 [41.6 kB]
Get:202 http://172.17.4.1/private bookworm-staging/main armhf libb-hooks-endofscope-perl all 0.26-1 [19.6 kB]
Get:203 http://172.17.4.1/private bookworm-staging/main armhf libsub-identify-perl armhf 0.14-3 [10.6 kB]
Get:204 http://172.17.4.1/private bookworm-staging/main armhf libnamespace-clean-perl all 0.27-2 [17.8 kB]
Get:205 http://172.17.4.1/private bookworm-staging/main armhf libcurl3-gnutls armhf 7.87.0-2 [328 kB]
Get:206 http://172.17.4.1/private bookworm-staging/main armhf libwww-curl-perl armhf 4.17-8+b1 [55.9 kB]
Get:207 http://172.17.4.1/private bookworm-staging/main armhf libwww-curl-simple-perl all 0.100191-3 [12.6 kB]
Get:208 http://172.17.4.1/private bookworm-staging/main armhf dh-r all 20230121 [37.9 kB]
Get:209 http://172.17.4.1/private bookworm-staging/main armhf libboost1.74-dev armhf 1.74.0-18.1 [9509 kB]
Get:210 http://172.17.4.1/private bookworm-staging/main armhf libboost-dev armhf 1.74.0.3+b4 [4824 B]
Get:211 http://172.17.4.1/private bookworm-staging/main armhf libboost-system1.74.0 armhf 1.74.0-18.1 [218 kB]
Get:212 http://172.17.4.1/private bookworm-staging/main armhf libboost-system1.74-dev armhf 1.74.0-18.1 [219 kB]
Get:213 http://172.17.4.1/private bookworm-staging/main armhf libboost-system-dev armhf 1.74.0.3+b4 [4744 B]
Get:214 http://172.17.4.1/private bookworm-staging/main armhf libhwloc15 armhf 2.9.0-1 [124 kB]
Get:215 http://172.17.4.1/private bookworm-staging/main armhf libsqlite3-dev armhf 3.40.1-1 [893 kB]
Get:216 http://172.17.4.1/private bookworm-staging/main armhf libtbbmalloc2 armhf 2021.8.0-1+rpi1 [39.6 kB]
Get:217 http://172.17.4.1/private bookworm-staging/main armhf libtbbbind-2-5 armhf 2021.8.0-1+rpi1 [12.3 kB]
Get:218 http://172.17.4.1/private bookworm-staging/main armhf libtbb12 armhf 2021.8.0-1+rpi1 [65.6 kB]
Get:219 http://172.17.4.1/private bookworm-staging/main armhf libtbb-dev armhf 2021.8.0-1+rpi1 [192 kB]
Get:220 http://172.17.4.1/private bookworm-staging/main armhf libzstd-dev armhf 1.5.2+dfsg2-3 [301 kB]
Get:221 http://172.17.4.1/private bookworm-staging/main armhf r-cran-littler armhf 0.3.17-1 [92.5 kB]
Get:222 http://172.17.4.1/private bookworm-staging/main armhf littler all 0.3.17-1 [14.4 kB]
Get:223 http://172.17.4.1/private bookworm-staging/main armhf r-cran-bh all 1.74.0-2 [5524 B]
Get:224 http://172.17.4.1/private bookworm-staging/main armhf r-cran-cli armhf 3.6.0-1 [1278 kB]
Get:225 http://172.17.4.1/private bookworm-staging/main armhf r-cran-digest armhf 0.6.31-1 [177 kB]
Get:226 http://172.17.4.1/private bookworm-staging/main armhf r-cran-glue armhf 1.6.2-1 [152 kB]
Get:227 http://172.17.4.1/private bookworm-staging/main armhf r-cran-lattice armhf 0.20-45-3 [1176 kB]
Get:228 http://172.17.4.1/private bookworm-staging/main armhf r-cran-rlang armhf 1.0.6-1 [1621 kB]
Get:229 http://172.17.4.1/private bookworm-staging/main armhf r-cran-lifecycle all 1.0.3+dfsg-1 [109 kB]
Get:230 http://172.17.4.1/private bookworm-staging/main armhf r-cran-mass armhf 7.3-58.2-1 [1124 kB]
Get:231 http://172.17.4.1/private bookworm-staging/main armhf r-cran-matrix armhf 1.5-3-1 [3701 kB]
Get:232 http://172.17.4.1/private bookworm-staging/main armhf r-cran-mvtnorm armhf 1.1-3-1 [219 kB]
Get:233 http://172.17.4.1/private bookworm-staging/main armhf r-cran-pkgkitten all 0.2.2-2 [27.0 kB]
Get:234 http://172.17.4.1/private bookworm-staging/main armhf r-cran-rcpp armhf 1.0.10-1 [2015 kB]
Get:235 http://172.17.4.1/private bookworm-staging/main armhf r-cran-rcppeigen armhf 0.3.3.9.3-1 [1164 kB]
Get:236 http://172.17.4.1/private bookworm-staging/main armhf r-cran-rcppparallel armhf 5.1.6+dfsg-1 [302 kB]
Get:237 http://172.17.4.1/private bookworm-staging/main armhf r-cran-rpf armhf 1.0.11+dfsg-2 [618 kB]
Get:238 http://172.17.4.1/private bookworm-staging/main armhf r-cran-stanheaders armhf 2.21.0-7-2 [784 kB]
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Setting up libexpat1:armhf (2.5.0-1) ...
Setting up libpipeline1:armhf (1.5.7-1) ...
Setting up libboost-system1.74.0:armhf (1.74.0-18.1) ...
Setting up libgraphite2-3:armhf (1.3.14-1) ...
Setting up libpixman-1-0:armhf (0.42.2-1) ...
Setting up libxau6:armhf (1:1.0.9-1) ...
Setting up libpsl5:armhf (0.21.0-1.2) ...
Setting up cpp-12 (12.2.0-14+rpi1) ...
Setting up libicu72:armhf (72.1-3) ...
Setting up liblerc4:armhf (4.0.0+ds-2) ...
Setting up libzstd-dev:armhf (1.5.2+dfsg2-3) ...
Setting up bsdextrautils (2.38.1-4) ...
Setting up libpcre16-3:armhf (2:8.39-15) ...
Setting up libdatrie1:armhf (0.2.13-2+b2) ...
Setting up libmagic-mgc (1:5.44-3) ...
Setting up libglib2.0-0:armhf (2.74.5-1) ...
No schema files found: doing nothing.
Setting up unzip (6.0-27) ...
Setting up libbrotli1:armhf (1.0.9-2+b3) ...
Setting up binutils-common:armhf (2.39.90.20221231-1+rpi1) ...
Setting up x11-common (1:7.7+23) ...
invoke-rc.d: could not determine current runlevel
invoke-rc.d: policy-rc.d denied execution of restart.
Setting up libnghttp2-14:armhf (1.51.0-1) ...
Setting up libmagic1:armhf (1:5.44-3) ...
Setting up libdeflate0:armhf (1.14-1) ...
Setting up libctf-nobfd0:armhf (2.39.90.20221231-1+rpi1) ...
Setting up gettext-base (0.21-10) ...
Setting up m4 (1.4.19-2) ...
Setting up file (1:5.44-3) ...
Setting up libgomp1:armhf (12.2.0-14+rpi1) ...
Setting up libjbig0:armhf (2.1-6.1) ...
Setting up libpcre2-16-0:armhf (10.42-1) ...
Setting up libpcre3:armhf (2:8.39-15) ...
Setting up zip (3.0-12) ...
Setting up perl-modules-5.36 (5.36.0-7) ...
Setting up autotools-dev (20220109.1) ...
Setting up libpcre2-32-0:armhf (10.42-1) ...
Setting up libblas3:armhf (3.11.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so.3 to provide /usr/lib/arm-linux-gnueabihf/libblas.so.3 (libblas.so.3-arm-linux-gnueabihf) in auto mode
Setting up libpkgconf3:armhf (1.8.1-1) ...
Setting up libjpeg62-turbo:armhf (1:2.1.2-1) ...
Setting up libsqlite3-dev:armhf (3.40.1-1) ...
Setting up libx11-data (2:1.8.3-3) ...
Setting up libjpeg62-turbo-dev:armhf (1:2.1.2-1) ...
Setting up librtmp1:armhf (2.4+20151223.gitfa8646d.1-2+b2) ...
Setting up libncurses6:armhf (6.4-2) ...
Setting up xz-utils (5.4.1-0.0) ...
Setting up libfribidi0:armhf (1.0.8-2.1) ...
Setting up libpng16-16:armhf (1.6.39-2) ...
Setting up libhwloc15:armhf (2.9.0-1) ...
Setting up libpcre32-3:armhf (2:8.39-15) ...
Setting up libatomic1:armhf (12.2.0-14+rpi1) ...
Setting up libtcl8.6:armhf (8.6.13+dfsg-1) ...
Setting up autopoint (0.21-10) ...
Setting up icu-devtools (72.1-3) ...
Setting up fonts-dejavu-core (2.37-2) ...
Setting up ucf (3.0043) ...
Setting up pkgconf-bin (1.8.1-1) ...
Setting up libgfortran5:armhf (12.2.0-14+rpi1) ...
Setting up libwebp7:armhf (1.2.4-0.1) ...
Setting up liblzma-dev:armhf (5.4.1-0.0) ...
Setting up libubsan1:armhf (12.2.0-14+rpi1) ...
Setting up zlib1g-dev:armhf (1:1.2.13.dfsg-1) ...
Setting up libpcre2-posix3:armhf (10.42-1) ...
Setting up libmd0:armhf (1.0.4-2) ...
Setting up libtiff6:armhf (4.5.0-4) ...
Setting up libasan8:armhf (12.2.0-14+rpi1) ...
Setting up libuchardet0:armhf (0.0.7-1) ...
Setting up libthai-data (0.1.29-1) ...
Setting up libbinutils:armhf (2.39.90.20221231-1+rpi1) ...
Setting up libbsd0:armhf (0.11.7-2) ...
Setting up libelf1:armhf (0.187-2+rpi2) ...
Setting up libicu-dev:armhf (72.1-3) ...
Setting up libxml2:armhf (2.9.14+dfsg-1.1+b1) ...
Setting up xdg-utils (1.1.3-4.1) ...
update-alternatives: using /usr/bin/xdg-open to provide /usr/bin/open (open) in auto mode
Setting up libcc1-0:armhf (12.2.0-14+rpi1) ...
Setting up libperl5.36:armhf (5.36.0-7) ...
Setting up libblas-dev:armhf (3.11.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/blas/libblas.so to provide /usr/lib/arm-linux-gnueabihf/libblas.so (libblas.so-arm-linux-gnueabihf) in auto mode
Setting up dctrl-tools (2.24-3) ...
Setting up libbz2-dev:armhf (1.0.8-5+b2) ...
Setting up libctf0:armhf (2.39.90.20221231-1+rpi1) ...
Setting up libpcrecpp0v5:armhf (2:8.39-15) ...
Setting up libtbbmalloc2:armhf (2021.8.0-1+rpi1) ...
Setting up libpaper1:armhf (1.1.28) ...
Creating config file /etc/papersize with new version
Setting up libice6:armhf (2:1.0.10-1) ...
Setting up libxdmcp6:armhf (1:1.1.2-3) ...
Setting up liblapack3:armhf (3.11.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so.3 to provide /usr/lib/arm-linux-gnueabihf/liblapack.so.3 (liblapack.so.3-arm-linux-gnueabihf) in auto mode
Setting up libncurses-dev:armhf (6.4-2) ...
Setting up libxcb1:armhf (1.15-1) ...
Setting up gettext (0.21-10) ...
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Setting up libtool (2.4.7-5) ...
Setting up libxcb-render0:armhf (1.15-1) ...
Setting up libpcre3-dev:armhf (2:8.39-15) ...
Setting up fontconfig-config (2.14.1-3) ...
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Setting up libssl3:armhf (3.0.7-2) ...
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Setting up libpaper-utils (1.1.28) ...
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Setting up pkgconf:armhf (1.8.1-1) ...
Setting up libtbbbind-2-5:armhf (2021.8.0-1+rpi1) ...
Setting up libthai0:armhf (0.1.29-1) ...
Setting up perl (5.36.0-7) ...
Setting up libpackage-stash-xs-perl:armhf (0.30-1+b1) ...
Setting up libalgorithm-c3-perl (0.11-2) ...
Setting up libswitch-perl (2.17-3) ...
Setting up libfreetype6:armhf (2.12.1+dfsg-4) ...
Setting up libgcc-12-dev:armhf (12.2.0-14+rpi1) ...
Setting up liblapack-dev:armhf (3.11.0-2) ...
update-alternatives: using /usr/lib/arm-linux-gnueabihf/lapack/liblapack.so to provide /usr/lib/arm-linux-gnueabihf/liblapack.so (liblapack.so-arm-linux-gnueabihf) in auto mode
Setting up libvariable-magic-perl (0.63-1+b1) ...
Setting up libio-html-perl (1.004-3) ...
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Setting up pkg-config:armhf (1.8.1-1) ...
Setting up libparams-util-perl (1.102-2+b1) ...
Setting up autoconf (2.71-3) ...
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Setting up libtimedate-perl (2.3300-2) ...
Setting up libregexp-ipv6-perl (0.03-3) ...
Setting up libsub-name-perl:armhf (0.26-2+b1) ...
Setting up dwz (0.15-1) ...
Setting up groff-base (1.22.4-9) ...
Setting up libncurses5-dev:armhf (6.4-2) ...
Setting up libsub-override-perl (0.09-4) ...
Setting up libx11-6:armhf (2:1.8.3-3) ...
Setting up libharfbuzz0b:armhf (6.0.0-1) ...
Setting up libdevel-globaldestruction-perl (0.14-4) ...
Setting up libssh2-1:armhf (1.10.0-3+b1) ...
Setting up libdevel-stacktrace-perl (2.0400-2) ...
Setting up openssl (3.0.7-2) ...
Setting up binutils-arm-linux-gnueabihf (2.39.90.20221231-1+rpi1) ...
Setting up libsm6:armhf (2:1.2.3-1) ...
Setting up liburi-perl (5.17-1) ...
Setting up libxmuu1:armhf (2:1.1.3-3) ...
Setting up automake (1:1.16.5-1.3) ...
update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode
Setting up libhttp-date-perl (6.05-2) ...
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Setting up libxrender1:armhf (1:0.9.10-1.1) ...
Setting up libdynaloader-functions-perl (0.003-3) ...
Setting up libstdc++-12-dev:armhf (12.2.0-14+rpi1) ...
Setting up libclone-perl:armhf (0.46-1) ...
Setting up libarchive-zip-perl (1.68-1) ...
Setting up libsub-identify-perl (0.14-3) ...
Setting up libdebhelper-perl (13.11.4) ...
Setting up liblwp-mediatypes-perl (6.04-2) ...
Setting up libtry-tiny-perl (0.31-2) ...
Setting up libxext6:armhf (2:1.3.4-1) ...
Setting up libencode-locale-perl (1.05-3) ...
Setting up libcurl3-gnutls:armhf (7.87.0-2) ...
Setting up libgfortran-12-dev:armhf (12.2.0-14+rpi1) ...
Setting up libtbb12:armhf (2021.8.0-1+rpi1) ...
Setting up binutils (2.39.90.20221231-1+rpi1) ...
Setting up libclass-c3-perl (0.35-2) ...
Setting up libdevel-callchecker-perl:armhf (0.008-2) ...
Setting up man-db (2.11.2-1) ...
Not building database; man-db/auto-update is not 'true'.
Setting up libsub-install-perl (0.929-1) ...
Setting up intltool-debian (0.35.0+20060710.6) ...
Setting up dh-autoreconf (20) ...
Setting up ca-certificates (20211016) ...
Updating certificates in /etc/ssl/certs...
127 added, 0 removed; done.
Setting up gcc-12 (12.2.0-14+rpi1) ...
Setting up libdata-optlist-perl (0.113-1) ...
Setting up libxt6:armhf (1:1.2.1-1) ...
Setting up xauth (1:1.1.2-1) ...
Setting up libcurl4:armhf (7.87.0-2) ...
Setting up libxss1:armhf (1:1.2.3-1) ...
Setting up libtbb-dev:armhf (2021.8.0-1+rpi1) ...
Setting up libmro-compat-perl (0.15-2) ...
Setting up libsub-exporter-perl (0.989-1) ...
Setting up libhttp-message-perl (6.44-1) ...
Setting up libeval-closure-perl (0.14-3) ...
Setting up g++-12 (12.2.0-14+rpi1) ...
Setting up libfile-stripnondeterminism-perl (1.13.1-1) ...
Setting up libboost1.74-dev:armhf (1.74.0-18.1) ...
Setting up po-debconf (1.0.21+nmu1) ...
Setting up libparams-classify-perl:armhf (0.015-2+b1) ...
Setting up libwww-curl-perl:armhf (4.17-8+b1) ...
Setting up gfortran-12 (12.2.0-14+rpi1) ...
Setting up libmodule-runtime-perl (0.016-2) ...
Setting up libboost-system1.74-dev:armhf (1.74.0-18.1) ...
Setting up libdist-checkconflicts-perl (0.11-2) ...
Setting up dh-strip-nondeterminism (1.13.1-1) ...
Setting up libboost-dev:armhf (1.74.0.3+b4) ...
Setting up r-cran-bh (1.74.0-2) ...
Setting up libmodule-implementation-perl (0.09-2) ...
Setting up libpackage-stash-perl (0.40-1) ...
Setting up libboost-system-dev:armhf (1.74.0.3+b4) ...
Setting up debhelper (13.11.4) ...
Setting up libmodule-runtime-conflicts-perl (0.003-2) ...
Setting up gfortran (4:12.2.0-1+rpi1) ...
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f95 (f95) in auto mode
update-alternatives: using /usr/bin/gfortran to provide /usr/bin/f77 (f77) in auto mode
Setting up libclass-load-perl (0.25-2) ...
Setting up libpackage-deprecationmanager-perl (0.17-2) ...
Setting up libdevel-overloadinfo-perl (0.007-1) ...
Setting up libclass-load-xs-perl (0.10-2+b1) ...
Setting up libb-hooks-endofscope-perl (0.26-1) ...
Setting up libmoose-perl:armhf (2.2202-1) ...
Setting up libnamespace-clean-perl (0.27-2) ...
Setting up libwww-curl-simple-perl (0.100191-3) ...
Processing triggers for libc-bin (2.36-6+rpi1) ...
Processing triggers for sgml-base (1.31) ...
Setting up libfontconfig1:armhf (2.14.1-3) ...
Setting up fontconfig (2.14.1-3) ...
Regenerating fonts cache... done.
Setting up libxft2:armhf (2.3.6-1) ...
Setting up libtk8.6:armhf (8.6.13-1) ...
Setting up libpango-1.0-0:armhf (1.50.12+ds-1) ...
Setting up libcairo2:armhf (1.16.0-7) ...
Setting up libpangoft2-1.0-0:armhf (1.50.12+ds-1) ...
Setting up libpangocairo-1.0-0:armhf (1.50.12+ds-1) ...
Setting up r-base-core (4.2.2.20221110-2) ...
Creating config file /etc/R/Renviron with new version
Setting up r-cran-lattice (0.20-45-3) ...
Setting up r-cran-pkgkitten (0.2.2-2) ...
Setting up r-cran-rcppparallel (5.1.6+dfsg-1) ...
Setting up r-cran-littler (0.3.17-1) ...
Setting up r-cran-rcpp (1.0.10-1) ...
Setting up r-cran-rlang (1.0.6-1) ...
Setting up r-base-dev (4.2.2.20221110-2) ...
Setting up littler (0.3.17-1) ...
Setting up r-cran-digest (0.6.31-1) ...
Setting up r-cran-mass (7.3-58.2-1) ...
Setting up r-cran-glue (1.6.2-1) ...
Setting up r-cran-cli (3.6.0-1) ...
Setting up r-cran-lifecycle (1.0.3+dfsg-1) ...
Setting up r-cran-mvtnorm (1.1-3-1) ...
Setting up r-cran-matrix (1.5-3-1) ...
Setting up dh-r (20230121) ...
Setting up r-cran-rcppeigen (0.3.3.9.3-1) ...
Setting up r-cran-stanheaders (2.21.0-7-2) ...
Setting up r-cran-rpf (1.0.11+dfsg-2) ...
Setting up sbuild-build-depends-r-cran-openmx-dummy (0.invalid.0) ...
Processing triggers for ca-certificates (20211016) ...
Updating certificates in /etc/ssl/certs...
0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
Processing triggers for libc-bin (2.36-6+rpi1) ...
W: No sandbox user '_apt' on the system, can not drop privileges
+------------------------------------------------------------------------------+
| Build environment |
+------------------------------------------------------------------------------+
Kernel: Linux 4.15.0-187-generic armhf (armv8l)
Toolchain package versions: binutils_2.39.90.20221231-1+rpi1 dpkg-dev_1.21.9+rpi1 g++-12_12.2.0-14+rpi1 gcc-12_12.2.0-14+rpi1 libc6-dev_2.36-6+rpi1 libstdc++-12-dev_12.2.0-14+rpi1 libstdc++6_12.2.0-14+rpi1 linux-libc-dev_6.0.12-1+rpi1
Package versions: adduser_3.129 apt_2.5.4 autoconf_2.71-3 automake_1:1.16.5-1.3 autopoint_0.21-10 autotools-dev_20220109.1 base-files_12.3+rpi1 base-passwd_3.6.1 bash_5.2-2 binutils_2.39.90.20221231-1+rpi1 binutils-arm-linux-gnueabihf_2.39.90.20221231-1+rpi1 binutils-common_2.39.90.20221231-1+rpi1 bsdextrautils_2.38.1-4 bsdutils_1:2.38.1-4 build-essential_12.9 bzip2_1.0.8-5+b2 ca-certificates_20211016 coreutils_9.1-1 cpp_4:12.2.0-1+rpi1 cpp-12_12.2.0-14+rpi1 dash_0.5.11+git20210903+057cd650a4ed-9 dctrl-tools_2.24-3 debconf_1.5.80 debhelper_13.11.4 debianutils_5.7-0.4 dh-autoreconf_20 dh-r_20230121 dh-strip-nondeterminism_1.13.1-1 diffutils_1:3.8-1 dirmngr_2.2.40-1 dpkg_1.21.9+rpi1 dpkg-dev_1.21.9+rpi1 dwz_0.15-1 e2fsprogs_1.46.6~rc1-1 fakeroot_1.29-1 file_1:5.44-3 findutils_4.9.0-3 fontconfig_2.14.1-3 fontconfig-config_2.14.1-3 fonts-dejavu-core_2.37-2 g++_4:12.2.0-1+rpi1 g++-12_12.2.0-14+rpi1 gcc_4:12.2.0-1+rpi1 gcc-12_12.2.0-14+rpi1 gcc-12-base_12.2.0-14+rpi1 gcc-7-base_7.5.0-6+rpi1+b2 gcc-8-base_8.4.0-7+rpi1 gcc-9-base_9.4.0-2+rpi1 gettext_0.21-10 gettext-base_0.21-10 gfortran_4:12.2.0-1+rpi1 gfortran-12_12.2.0-14+rpi1 gnupg_2.2.40-1 gnupg-l10n_2.2.40-1 gnupg-utils_2.2.40-1 gpg_2.2.40-1 gpg-agent_2.2.40-1 gpg-wks-client_2.2.40-1 gpg-wks-server_2.2.40-1 gpgconf_2.2.40-1 gpgsm_2.2.40-1 gpgv_2.2.40-1 grep_3.8-3 groff-base_1.22.4-9 gzip_1.12-1 hostname_3.23 icu-devtools_72.1-3 init-system-helpers_1.64 intltool-debian_0.35.0+20060710.6 iputils-ping_3:20221126-1 krb5-locales_1.20.1-1 libacl1_2.3.1-2 libalgorithm-c3-perl_0.11-2 libapt-pkg6.0_2.5.4 libarchive-zip-perl_1.68-1 libasan8_12.2.0-14+rpi1 libassuan0_2.5.5-5 libatomic1_12.2.0-14+rpi1 libattr1_1:2.5.1-3 libaudit-common_1:3.0.7-1.1 libaudit1_1:3.0.7-1.1 libb-hooks-endofscope-perl_0.26-1 libb-hooks-op-check-perl_0.22-2+b1 libbinutils_2.39.90.20221231-1+rpi1 libblas-dev_3.11.0-2 libblas3_3.11.0-2 libblkid1_2.38.1-4 libboost-dev_1.74.0.3+b4 libboost-system-dev_1.74.0.3+b4 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libwww-curl-simple-perl_0.100191-3 libx11-6_2:1.8.3-3 libx11-data_2:1.8.3-3 libxau6_1:1.0.9-1 libxcb-render0_1.15-1 libxcb-shm0_1.15-1 libxcb1_1.15-1 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.4-1 libxft2_2.3.6-1 libxml2_2.9.14+dfsg-1.1+b1 libxmuu1_2:1.1.3-3 libxrender1_1:0.9.10-1.1 libxss1_1:1.2.3-1 libxt6_1:1.2.1-1 libxxhash0_0.8.1-1 libzstd-dev_1.5.2+dfsg2-3 libzstd1_1.5.2+dfsg2-3 linux-libc-dev_6.0.12-1+rpi1 littler_0.3.17-1 login_1:4.13+dfsg1-1 logsave_1.46.6~rc1-1 lsb-base_11.4+rpi1 m4_1.4.19-2 make_4.3-4.1 man-db_2.11.2-1 mawk_1.3.4.20200120-3.1 mount_2.38.1-4 nano_7.1-1 ncurses-base_6.4-2 ncurses-bin_6.4-2 netbase_6.4 openssl_3.0.7-2 passwd_1:4.13+dfsg1-1 patch_2.7.6-7 perl_5.36.0-7 perl-base_5.36.0-7 perl-modules-5.36_5.36.0-7 pinentry-curses_1.2.1-1 pkg-config_1.8.1-1 pkgconf_1.8.1-1 pkgconf-bin_1.8.1-1 po-debconf_1.0.21+nmu1 r-base-core_4.2.2.20221110-2 r-base-dev_4.2.2.20221110-2 r-cran-bh_1.74.0-2 r-cran-cli_3.6.0-1 r-cran-digest_0.6.31-1 r-cran-glue_1.6.2-1 r-cran-lattice_0.20-45-3 r-cran-lifecycle_1.0.3+dfsg-1 r-cran-littler_0.3.17-1 r-cran-mass_7.3-58.2-1 r-cran-matrix_1.5-3-1 r-cran-mvtnorm_1.1-3-1 r-cran-pkgkitten_0.2.2-2 r-cran-rcpp_1.0.10-1 r-cran-rcppeigen_0.3.3.9.3-1 r-cran-rcppparallel_5.1.6+dfsg-1 r-cran-rlang_1.0.6-1 r-cran-rpf_1.0.11+dfsg-2 r-cran-stanheaders_2.21.0-7-2 raspbian-archive-keyring_20120528.2 readline-common_8.2-1.3 rpcsvc-proto_1.4.3-1 sbuild-build-depends-core-dummy_0.invalid.0 sbuild-build-depends-r-cran-openmx-dummy_0.invalid.0 sed_4.8-1 sensible-utils_0.0.17 sgml-base_1.31 sysvinit-utils_3.05-7 tar_1.34+dfsg-1 tzdata_2022f-1 ucf_3.0043 unzip_6.0-27 util-linux_2.38.1-4 util-linux-extra_2.38.1-4 x11-common_1:7.7+23 xauth_1:1.1.2-1 xdg-utils_1.1.3-4.1 xz-utils_5.4.1-0.0 zip_3.0-12 zlib1g_1:1.2.13.dfsg-1 zlib1g-dev_1:1.2.13.dfsg-1
+------------------------------------------------------------------------------+
| Build |
+------------------------------------------------------------------------------+
Unpack source
-------------
gpgv: unknown type of key resource 'trustedkeys.kbx'
gpgv: keyblock resource '/tmp/dpkg-verify-sig.GIQk8I2K/trustedkeys.kbx': General error
gpgv: Signature made Fri Jan 27 09:12:01 2023 UTC
gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1
gpgv: issuer "tille@debian.org"
gpgv: Can't check signature: No public key
dpkg-source: warning: cannot verify signature ./r-cran-openmx_2.21.1+dfsg-1.dsc
dpkg-source: info: extracting r-cran-openmx in /<<BUILDDIR>>/r-cran-openmx-2.21.1+dfsg
dpkg-source: info: unpacking r-cran-openmx_2.21.1+dfsg.orig.tar.xz
dpkg-source: info: unpacking r-cran-openmx_2.21.1+dfsg-1.debian.tar.xz
dpkg-source: info: using patch list from debian/patches/series
dpkg-source: info: applying 2to3.patch
dpkg-source: info: applying use_debian_packaged_libs.patch
Check disk space
----------------
Sufficient free space for build
User Environment
----------------
APT_CONFIG=/var/lib/sbuild/apt.conf
DEB_BUILD_OPTIONS=parallel=4
HOME=/sbuild-nonexistent
LC_ALL=POSIX
LOGNAME=buildd
PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games
SCHROOT_ALIAS_NAME=bookworm-staging-armhf-sbuild
SCHROOT_CHROOT_NAME=bookworm-staging-armhf-sbuild
SCHROOT_COMMAND=env
SCHROOT_GID=112
SCHROOT_GROUP=buildd
SCHROOT_SESSION_ID=bookworm-staging-armhf-sbuild-66c67b82-f669-49c1-b525-add89e00066e
SCHROOT_UID=107
SCHROOT_USER=buildd
SHELL=/bin/sh
USER=buildd
dpkg-buildpackage
-----------------
dpkg-buildpackage: info: source package r-cran-openmx
dpkg-buildpackage: info: source version 2.21.1+dfsg-1
dpkg-buildpackage: info: source distribution unstable
dpkg-source --before-build .
dpkg-buildpackage: info: host architecture armhf
debian/rules clean
dh clean --buildsystem R
dh_auto_clean -O--buildsystem=R
dh_autoreconf_clean -O--buildsystem=R
dh_clean -O--buildsystem=R
debian/rules binary-arch
dh binary-arch --buildsystem R
dh_update_autotools_config -a -O--buildsystem=R
dh_autoreconf -a -O--buildsystem=R
dh_auto_configure -a -O--buildsystem=R
dh_auto_build -a -O--buildsystem=R
dh_auto_test -a -O--buildsystem=R
create-stamp debian/debhelper-build-stamp
dh_testroot -a -O--buildsystem=R
dh_prep -a -O--buildsystem=R
dh_auto_install --destdir=debian/r-cran-openmx/ -a -O--buildsystem=R
I: R packages needed for DEP8: testthat, numderiv
I: R Package: OpenMx Version: 2.21.1
I: Building using R version 4.2.2.20221110-2
I: R API version: r-api-4.0
I: Using built-time from d/changelog: Fri, 27 Jan 2023 09:32:58 +0100
mkdir -p /<<BUILDDIR>>/r-cran-openmx-2.21.1\+dfsg/debian/r-cran-openmx/usr/lib/R/site-library
R CMD INSTALL -l /<<BUILDDIR>>/r-cran-openmx-2.21.1\+dfsg/debian/r-cran-openmx/usr/lib/R/site-library --clean . "--built-timestamp='Fri, 27 Jan 2023 09:32:58 +0100'"
* installing *source* package 'OpenMx' ...
files 'inst/doc/factor_analysis.html', 'inst/doc/regularization.html' are missing
files 'inst/tools/mxAlgebraParser.py', 'inst/tools/mxParser.py', 'inst/tools/sphinxToR.py', 'src/Makevars.in' have the wrong MD5 checksums
** using staged installation
NOTE: ./configure is not an autoconf generated script.
Change default C/C++ compiler and default compile flags by editing ~/.R/Makevars
** libs
make[1]: Entering directory '/<<BUILDDIR>>/r-cran-openmx-2.21.1+dfsg/src'
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c Compute.cpp -o Compute.o
In file included from /usr/include/c++/12/bits/stl_algo.h:60,
from /usr/include/c++/12/algorithm:61,
from Compute.cpp:17:
/usr/include/c++/12/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/12/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1802 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1908 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/12/bits/stl_algo.h:1922:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1922 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]',
inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >]' at /usr/include/c++/12/bits/stl_algo.h:4820:18,
inlined from 'void AutoTune<T>::finish() [with T = JacobianGadget]' at autoTune.h:48:14:
/usr/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1937 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1938 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1939 | __comp);
| ~~~~~~~
In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]',
inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]' at /usr/include/c++/12/bits/stl_algo.h:1940:31,
inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >]' at /usr/include/c++/12/bits/stl_algo.h:4820:18,
inlined from 'void AutoTune<T>::finish() [with T = JacobianGadget]' at autoTune.h:48:14:
/usr/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1854 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]',
inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >]' at /usr/include/c++/12/bits/stl_algo.h:4820:18,
inlined from 'void AutoTune<T>::finish() [with T = JacobianGadget]' at autoTune.h:49:14:
/usr/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1937 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1938 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1939 | __comp);
| ~~~~~~~
In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]',
inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]' at /usr/include/c++/12/bits/stl_algo.h:1940:31,
inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >]' at /usr/include/c++/12/bits/stl_algo.h:4820:18,
inlined from 'void AutoTune<T>::finish() [with T = JacobianGadget]' at autoTune.h:49:14:
/usr/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1854 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c ComputeGD.cpp -o ComputeGD.o
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c ComputeNM.cpp -o ComputeNM.o
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c ComputeNR.cpp -o ComputeNR.o
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c ComputeSD.cpp -o ComputeSD.o
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c FellnerFitFunction.cpp -o FellnerFitFunction.o
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c MarkovExpectation.cpp -o MarkovExpectation.o
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c MarkovFF.cpp -o MarkovFF.o
gcc -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c asa.c -o asa.o
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c asubnp.cpp -o asubnp.o
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c ba81quad.cpp -o ba81quad.o
In file included from /usr/include/c++/12/vector:70,
from /usr/lib/R/site-library/Rcpp/include/RcppCommon.h:60,
from /usr/lib/R/site-library/Rcpp/include/Rcpp.h:27,
from omxDefines.h:21,
from ba81quad.h:21,
from ba81quad.cpp:18:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
439 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
inlined from 'void ba81NormalQuad::layer::refresh(Eigen::MatrixBase<U>&, Eigen::MatrixBase<Derived>&) [with T1 = Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >; T2 = Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >]' at ba81quad.h:1112:21:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
inlined from 'void ba81NormalQuad::layer::refresh(Eigen::MatrixBase<U>&, Eigen::MatrixBase<Derived>&) [with T1 = Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >; T2 = Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >]' at ba81quad.h:1148:25:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
inlined from 'void ba81NormalQuad::layer::refresh(Eigen::MatrixBase<U>&, Eigen::MatrixBase<Derived>&) [with T1 = Eigen::Map<Eigen::Matrix<double, -1, -1>, 0, Eigen::Stride<0, 0> >; T2 = Eigen::Map<Eigen::Matrix<double, -1, 1>, 0, Eigen::Stride<0, 0> >]' at ba81quad.h:1158:21:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c dmvnorm.cpp -o dmvnorm.o
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c fitMultigroup.cpp -o fitMultigroup.o
gcc -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c general.c -o general.o
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c glue.cpp -o glue.o
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c matlogexp.cpp -o matlogexp.o
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c matrix.cpp -o matrix.o
gfortran -fno-optimize-sibling-calls -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -c mvbvn.f -o mvbvn.o
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c nanotimer.cpp -o nanotimer.o
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c omxAlgebra.cpp -o omxAlgebra.o
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c omxAlgebraFitFunction.cpp -o omxAlgebraFitFunction.o
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c omxData.cpp -o omxData.o
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c omxExpectation.cpp -o omxExpectation.o
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c omxExpectationBA81.cpp -o omxExpectationBA81.o
In file included from /usr/include/c++/12/vector:70,
from /usr/lib/R/site-library/Rcpp/include/RcppCommon.h:60,
from /usr/lib/R/site-library/Rcpp/include/Rcpp.h:27,
from omxDefines.h:21,
from omxExpectation.h:32,
from omxExpectationBA81.h:20,
from omxExpectationBA81.cpp:20:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const double&}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
439 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
inlined from 'void ba81NormalQuad::layer::refresh(Eigen::MatrixBase<U>&, Eigen::MatrixBase<Derived>&) [with T1 = Eigen::Matrix<double, -1, -1>; T2 = Eigen::Matrix<double, -1, 1>]' at ba81quad.h:1112:21:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
inlined from 'void ba81NormalQuad::layer::refresh(Eigen::MatrixBase<U>&, Eigen::MatrixBase<Derived>&) [with T1 = Eigen::Matrix<double, -1, -1>; T2 = Eigen::Matrix<double, -1, 1>]' at ba81quad.h:1148:25:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = double; _Alloc = std::allocator<double>]',
inlined from 'void ba81NormalQuad::layer::refresh(Eigen::MatrixBase<U>&, Eigen::MatrixBase<Derived>&) [with T1 = Eigen::Matrix<double, -1, -1>; T2 = Eigen::Matrix<double, -1, 1>]' at ba81quad.h:1158:21:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c omxExportBackendState.cpp -o omxExportBackendState.o
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c omxFIMLFitFunction.cpp -o omxFIMLFitFunction.o
In file included from /usr/include/c++/12/bits/stl_algo.h:60,
from /usr/include/c++/12/algorithm:61,
from /usr/lib/R/site-library/Rcpp/include/RcppCommon.h:64,
from /usr/lib/R/site-library/Rcpp/include/Rcpp.h:27,
from omxDefines.h:21,
from omxFIMLFitFunction.cpp:18:
/usr/include/c++/12/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/12/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1802 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1908 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/12/bits/stl_algo.h:1922:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1922 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]',
inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >]' at /usr/include/c++/12/bits/stl_algo.h:4820:18,
inlined from 'nanotime_t omxFIMLFitFunction::getMedianElapsedTime()' at omxFIMLFitFunction.cpp:27:11:
/usr/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1937 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1938 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1939 | __comp);
| ~~~~~~~
In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]',
inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]' at /usr/include/c++/12/bits/stl_algo.h:1940:31,
inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >]' at /usr/include/c++/12/bits/stl_algo.h:4820:18,
inlined from 'nanotime_t omxFIMLFitFunction::getMedianElapsedTime()' at omxFIMLFitFunction.cpp:27:11:
/usr/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1854 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:70,
from /usr/lib/R/site-library/Rcpp/include/RcppCommon.h:60:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<long long unsigned int>::iterator' changed in GCC 7.1
439 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {long long unsigned int}; _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]',
inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = long long unsigned int; _Alloc = std::allocator<long long unsigned int>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
inlined from 'virtual void omxFIMLFitFunction::compute2(int, FitContext*)' at omxFIMLFitFunction.cpp:945:25:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c omxFitFunction.cpp -o omxFitFunction.o
In file included from /usr/include/c++/12/bits/stl_algo.h:60,
from /usr/include/c++/12/algorithm:61,
from /usr/lib/R/site-library/Rcpp/include/RcppCommon.h:64,
from /usr/lib/R/site-library/Rcpp/include/Rcpp.h:27,
from omxDefines.h:21,
from omxFitFunction.h:33,
from omxFitFunction.cpp:31:
/usr/include/c++/12/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/12/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1802 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1908 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/12/bits/stl_algo.h:1922:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1922 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]',
inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >]' at /usr/include/c++/12/bits/stl_algo.h:4820:18,
inlined from 'void AutoTune<T>::finish() [with T = JacobianGadget]' at autoTune.h:48:14:
/usr/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1937 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1938 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1939 | __comp);
| ~~~~~~~
In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]',
inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]' at /usr/include/c++/12/bits/stl_algo.h:1940:31,
inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >]' at /usr/include/c++/12/bits/stl_algo.h:4820:18,
inlined from 'void AutoTune<T>::finish() [with T = JacobianGadget]' at autoTune.h:48:14:
/usr/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1854 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]',
inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >]' at /usr/include/c++/12/bits/stl_algo.h:4820:18,
inlined from 'void AutoTune<T>::finish() [with T = JacobianGadget]' at autoTune.h:49:14:
/usr/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1937 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1938 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1939 | __comp);
| ~~~~~~~
In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]',
inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]' at /usr/include/c++/12/bits/stl_algo.h:1940:31,
inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >]' at /usr/include/c++/12/bits/stl_algo.h:4820:18,
inlined from 'void AutoTune<T>::finish() [with T = JacobianGadget]' at autoTune.h:49:14:
/usr/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1854 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c omxFitFunctionBA81.cpp -o omxFitFunctionBA81.o
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c omxGREMLExpectation.cpp -o omxGREMLExpectation.o
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c omxGREMLfitfunction.cpp -o omxGREMLfitfunction.o
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c omxHessianCalculation.cpp -o omxHessianCalculation.o
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c omxImportFrontendState.cpp -o omxImportFrontendState.o
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c omxLISRELExpectation.cpp -o omxLISRELExpectation.o
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c omxMLFitFunction.cpp -o omxMLFitFunction.o
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c omxMatrix.cpp -o omxMatrix.o
In file included from /usr/lib/R/site-library/RcppEigen/include/Eigen/SVD:38,
from /usr/lib/R/site-library/RcppEigen/include/Eigen/Dense:5,
from /usr/lib/R/site-library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp:13,
from /usr/lib/R/site-library/StanHeaders/include/stan/math/version.hpp:4,
from omxDefines.h:234,
from omxMatrix.h:36,
from omxMatrix.cpp:28:
/usr/lib/R/site-library/RcppEigen/include/Eigen/src/SVD/BDCSVD.h: In member function 'void Eigen::BDCSVD<MatrixType>::structured_update(Eigen::Block<Eigen::Matrix<typename Eigen::NumTraits<typename Derived::Scalar>::Real, -1, -1, 0>, -1, -1>, const MatrixXr&, Eigen::Index) [with _MatrixType = Eigen::Matrix<double, -1, -1>]':
/usr/lib/R/site-library/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:340:6: note: parameter passing for argument of type 'Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>' changed in GCC 7.1
340 | void BDCSVD<MatrixType>::structured_update(Block<MatrixXr,Dynamic,Dynamic> A, const MatrixXr &B, Index n1)
| ^~~~~~~~~~~~~~~~~~
/usr/lib/R/site-library/RcppEigen/include/Eigen/src/SVD/BDCSVD.h: In member function 'void Eigen::BDCSVD<MatrixType>::divide(Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index, Eigen::Index) [with _MatrixType = Eigen::Matrix<double, -1, -1>]':
/usr/lib/R/site-library/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:542:22: note: parameter passing for argument of type 'Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>' changed in GCC 7.1
542 | structured_update(m_naiveU.block(firstCol, firstCol, n + 1, n + 1), UofSVD, (n+2)/2);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/lib/R/site-library/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:542:22: note: parameter passing for argument of type 'Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>' changed in GCC 7.1
/usr/lib/R/site-library/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:550:34: note: parameter passing for argument of type 'Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>' changed in GCC 7.1
550 | if (m_compV) structured_update(m_naiveV.block(firstRowW, firstColW, n, n), VofSVD, (n+1)/2);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/lib/R/site-library/RcppEigen/include/Eigen/src/SVD/BDCSVD.h:550:34: note: parameter passing for argument of type 'Eigen::Block<Eigen::Matrix<double, -1, -1>, -1, -1, false>' changed in GCC 7.1
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c omxNLopt.cpp -o omxNLopt.o
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c omxNPSOLSpecific.cpp -o omxNPSOLSpecific.o
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c omxNormalExpectation.cpp -o omxNormalExpectation.o
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c omxRAMExpectation.cpp -o omxRAMExpectation.o
In file included from /usr/include/c++/12/vector:70,
from /usr/lib/R/site-library/Rcpp/include/RcppCommon.h:60,
from /usr/lib/R/site-library/Rcpp/include/Rcpp.h:27,
from omxDefines.h:21,
from omxExpectation.h:32,
from omxRAMExpectation.cpp:17:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {const RelationalRAMExpectation::addr&}; _Tp = RelationalRAMExpectation::addr; _Alloc = std::allocator<RelationalRAMExpectation::addr>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<RelationalRAMExpectation::addr>::iterator' changed in GCC 7.1
439 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/12/vector:64:
In member function 'void std::vector<_Tp, _Alloc>::push_back(const value_type&) [with _Tp = RelationalRAMExpectation::addr; _Alloc = std::allocator<RelationalRAMExpectation::addr>]',
inlined from 'int RelationalRAMExpectation::state::flattenOneRow(omxExpectation*, int, int&)' at omxRAMExpectation.cpp:1024:19:
/usr/include/c++/12/bits/stl_vector.h:1287:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<RelationalRAMExpectation::addr*, std::vector<RelationalRAMExpectation::addr> >' changed in GCC 7.1
1287 | _M_realloc_insert(end(), __x);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c omxRFitFunction.cpp -o omxRFitFunction.o
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c omxRowFitFunction.cpp -o omxRowFitFunction.o
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c omxState.cpp -o omxState.o
In file included from /usr/include/c++/12/bits/stl_algo.h:60,
from /usr/include/c++/12/algorithm:61,
from /usr/lib/R/site-library/Rcpp/include/RcppCommon.h:64,
from /usr/lib/R/site-library/Rcpp/include/Rcpp.h:27,
from omxDefines.h:21,
from omxState.h:31,
from omxState.cpp:22:
/usr/include/c++/12/bits/stl_heap.h: In function 'void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Distance = int; _Tp = long long unsigned int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/12/bits/stl_heap.h:224:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
224 | __adjust_heap(_RandomAccessIterator __first, _Distance __holeIndex,
| ^~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1802 | __insertion_sort(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1802:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/12/bits/stl_algo.h: In function 'void std::__introsort_loop(_RandomAccessIterator, _RandomAccessIterator, _Size, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Size = int; _Compare = __gnu_cxx::__ops::_Iter_less_iter]':
/usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1908 | __introsort_loop(_RandomAccessIterator __first,
| ^~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1908:5: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
/usr/include/c++/12/bits/stl_algo.h:1922:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1922 | std::__introsort_loop(__cut, __last, __depth_limit, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]',
inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >]' at /usr/include/c++/12/bits/stl_algo.h:4820:18,
inlined from 'void AutoTune<T>::finish() [with T = JacobianGadget]' at autoTune.h:48:14:
/usr/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1937 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1938 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1939 | __comp);
| ~~~~~~~
In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]',
inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]' at /usr/include/c++/12/bits/stl_algo.h:1940:31,
inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >]' at /usr/include/c++/12/bits/stl_algo.h:4820:18,
inlined from 'void AutoTune<T>::finish() [with T = JacobianGadget]' at autoTune.h:48:14:
/usr/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1854 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
In function 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]',
inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >]' at /usr/include/c++/12/bits/stl_algo.h:4820:18,
inlined from 'void AutoTune<T>::finish() [with T = JacobianGadget]' at autoTune.h:49:14:
/usr/include/c++/12/bits/stl_algo.h:1937:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1937 | std::__introsort_loop(__first, __last,
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
1938 | std::__lg(__last - __first) * 2,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1939 | __comp);
| ~~~~~~~
In function 'void std::__final_insertion_sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]',
inlined from 'void std::__sort(_RandomAccessIterator, _RandomAccessIterator, _Compare) [with _RandomAccessIterator = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >; _Compare = __gnu_cxx::__ops::_Iter_less_iter]' at /usr/include/c++/12/bits/stl_algo.h:1940:31,
inlined from 'void std::sort(_RAIter, _RAIter) [with _RAIter = __gnu_cxx::__normal_iterator<long long unsigned int*, vector<long long unsigned int> >]' at /usr/include/c++/12/bits/stl_algo.h:4820:18,
inlined from 'void AutoTune<T>::finish() [with T = JacobianGadget]' at autoTune.h:49:14:
/usr/include/c++/12/bits/stl_algo.h:1849:32: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1849 | std::__insertion_sort(__first, __first + int(_S_threshold), __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/12/bits/stl_algo.h:1854:30: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<long long unsigned int*, std::vector<long long unsigned int> >' changed in GCC 7.1
1854 | std::__insertion_sort(__first, __last, __comp);
| ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c omxStateSpaceExpectation.cpp -o omxStateSpaceExpectation.o
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c omxSymbolTable.cpp -o omxSymbolTable.o
In file included from /usr/include/c++/12/vector:70,
from /usr/lib/R/site-library/Rcpp/include/RcppCommon.h:60,
from /usr/lib/R/site-library/Rcpp/include/Rcpp.h:27,
from omxDefines.h:21,
from omxMatrix.h:36,
from omxSymbolTable.h:4,
from omxSymbolTable.cpp:1:
/usr/include/c++/12/bits/vector.tcc: In member function 'void std::vector<_Tp, _Alloc>::_M_realloc_insert(iterator, _Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]':
/usr/include/c++/12/bits/vector.tcc:439:7: note: parameter passing for argument of type 'std::vector<double>::iterator' changed in GCC 7.1
439 | vector<_Tp, _Alloc>::
| ^~~~~~~~~~~~~~~~~~~
In member function 'void std::vector<_Tp, _Alloc>::emplace_back(_Args&& ...) [with _Args = {double}; _Tp = double; _Alloc = std::allocator<double>]',
inlined from 'void std::vector<_Tp, _Alloc>::push_back(value_type&&) [with _Tp = double; _Alloc = std::allocator<double>]' at /usr/include/c++/12/bits/stl_vector.h:1294:21,
inlined from 'void orderByNorm(const T&, std::vector<int>&) [with T = Eigen::Matrix<std::complex<double>, -1, 1>]' at AlgebraFunctions.h:2177:16:
/usr/include/c++/12/bits/vector.tcc:123:28: note: parameter passing for argument of type '__gnu_cxx::__normal_iterator<double*, std::vector<double> >' changed in GCC 7.1
123 | _M_realloc_insert(end(), std::forward<_Args>(__args)...);
| ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c omxWLSFitFunction.cpp -o omxWLSFitFunction.o
gcc -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c optimize.c -o optimize.o
gcc -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c options.c -o options.o
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c penalty.cpp -o penalty.o
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c povRAM.cpp -o povRAM.o
gfortran -fno-optimize-sibling-calls -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -c sadmvn.f -o sadmvn.o
gcc -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c slsqp.c -o slsqp.o
g++ -std=gnu++14 -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -fopenmp -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c ssMLFit.cpp -o ssMLFit.o
gcc -I"/usr/share/R/include" -DNDEBUG -I'/usr/lib/R/site-library/Rcpp/include' -I'/usr/lib/R/site-library/RcppEigen/include' -I'/usr/lib/R/site-library/RcppParallel/include' -I'/usr/lib/R/site-library/StanHeaders/include' -I'/usr/lib/R/site-library/BH/include' -I'/usr/lib/R/site-library/rpf/include' -DSTRICT_R_HEADERS -fpic -g -O2 -ffile-prefix-map=/build/r-base-KCFL8O/r-base-4.2.2.20221110=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c stop.c -o stop.o
g++ -std=gnu++14 -shared -L/usr/lib/R/lib -Wl,-z,relro -o OpenMx.so Compute.o ComputeGD.o ComputeNM.o ComputeNR.o ComputeSD.o FellnerFitFunction.o MarkovExpectation.o MarkovFF.o asa.o asubnp.o ba81quad.o dmvnorm.o fitMultigroup.o general.o glue.o matlogexp.o matrix.o mvbvn.o nanotimer.o omxAlgebra.o omxAlgebraFitFunction.o omxData.o omxExpectation.o omxExpectationBA81.o omxExportBackendState.o omxFIMLFitFunction.o omxFitFunction.o omxFitFunctionBA81.o omxGREMLExpectation.o omxGREMLfitfunction.o omxHessianCalculation.o omxImportFrontendState.o omxLISRELExpectation.o omxMLFitFunction.o omxMatrix.o omxNLopt.o omxNPSOLSpecific.o omxNormalExpectation.o omxRAMExpectation.o omxRFitFunction.o omxRowFitFunction.o omxState.o omxStateSpaceExpectation.o omxSymbolTable.o omxWLSFitFunction.o optimize.o options.o penalty.o povRAM.o sadmvn.o slsqp.o ssMLFit.o stop.o -fopenmp -llapack -lblas -lboost_system -lsqlite3 -lgfortran -lm -lgfortran -lm -L/usr/lib/R/lib -lR
mkdir -p ../inst/debug
cp *.gcno ../inst/debug/
cp: cannot stat '*.gcno': No such file or directory
make[1]: [Makevars:93: save-gcno] Error 1 (ignored)
make[1]: Leaving directory '/<<BUILDDIR>>/r-cran-openmx-2.21.1+dfsg/src'
make[1]: Entering directory '/<<BUILDDIR>>/r-cran-openmx-2.21.1+dfsg/src'
make[1]: Leaving directory '/<<BUILDDIR>>/r-cran-openmx-2.21.1+dfsg/src'
installing to /<<BUILDDIR>>/r-cran-openmx-2.21.1+dfsg/debian/r-cran-openmx/usr/lib/R/site-library/00LOCK-r-cran-openmx-2.21.1+dfsg/00new/OpenMx/libs
** R
** data
*** moving datasets to lazyload DB
** demo
** inst
** byte-compile and prepare package for lazy loading
Creating a generic function for 'nrow' from package 'base' in package 'OpenMx'
Creating a generic function for 'ncol' from package 'base' in package 'OpenMx'
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (OpenMx)
W: Ignoring specified R dependency: R (>= 3.5.0)
I: Using r-cran-testthat for Recommends:testthat
I: Using r-cran-numderiv for Recommends:numderiv
I: Using r-cran-mvtnorm for Suggests:mvtnorm
I: Using r-cran-roxygen2 for Suggests:roxygen2 (>= 6.1)
I: Using r-cran-rpf for Suggests:rpf (>= 0.45)
I: Using r-cran-snowfall for Suggests:snowfall
I: Using r-cran-lme4 for Suggests:lme4
I: Using r-cran-covr for Suggests:covr
W: Cannot find a debian package for Suggests:umx
W: Cannot find a debian package for Suggests:ifaTools
I: Using r-cran-knitr for Suggests:knitr
I: Using r-cran-markdown for Suggests:markdown
I: Using r-cran-rmarkdown for Suggests:rmarkdown
I: Using r-cran-reshape2 for Suggests:reshape2
I: Using r-cran-ggplot2 for Suggests:ggplot2
I: Using r-cran-digest for Imports:digest
I: Using r-cran-mass for Imports:MASS
I: Using r-cran-matrix for Imports:Matrix (>= 1.2-16)
I: Using r-cran-rcpp for Imports:Rcpp
I: Using r-cran-rcppparallel for Imports:RcppParallel
I: Using r-cran-lifecycle for Imports:lifecycle
I: Using r-cran-rcpp for LinkingTo:Rcpp
I: Using r-cran-rcppeigen for LinkingTo:RcppEigen
I: Using r-cran-rcppparallel for LinkingTo:RcppParallel
I: Using r-cran-stanheaders for LinkingTo:StanHeaders (>= 2.10.0.2)
I: Using r-cran-bh for LinkingTo:BH (>= 1.69.0-1)
I: Using r-cran-rpf for LinkingTo:rpf (>= 0.45)
I: Use r-cran-openmx as Debian binary package for variables substitution
dh_installdocs -a -O--buildsystem=R
dh_installchangelogs -a -O--buildsystem=R
dh_installsystemduser -a -O--buildsystem=R
dh_perl -a -O--buildsystem=R
dh_link -a -O--buildsystem=R
dh_strip_nondeterminism -a -O--buildsystem=R
dh_compress -a -O--buildsystem=R
debian/rules override_dh_fixperms
make[1]: Entering directory '/<<BUILDDIR>>/r-cran-openmx-2.21.1+dfsg'
dh_fixperms
find debian \( -name "*.R" -o -name "*.txt" \) -exec chmod -x \{\} \;
make[1]: Leaving directory '/<<BUILDDIR>>/r-cran-openmx-2.21.1+dfsg'
dh_missing -a -O--buildsystem=R
dh_dwz -a -O--buildsystem=R
dh_strip -a -O--buildsystem=R
dh_makeshlibs -a -O--buildsystem=R
dh_shlibdeps -a -O--buildsystem=R
dh_installdeb -a -O--buildsystem=R
dh_gencontrol -a -O--buildsystem=R
dh_md5sums -a -O--buildsystem=R
dh_builddeb -a -O--buildsystem=R
dpkg-deb: building package 'r-cran-openmx-dbgsym' in '../r-cran-openmx-dbgsym_2.21.1+dfsg-1_armhf.deb'.
dpkg-deb: building package 'r-cran-openmx' in '../r-cran-openmx_2.21.1+dfsg-1_armhf.deb'.
dpkg-genbuildinfo --build=any -O../r-cran-openmx_2.21.1+dfsg-1_armhf.buildinfo
dpkg-genchanges --build=any -mRaspbian mythic lxc autobuilder 1 <root@raspbian.org> -O../r-cran-openmx_2.21.1+dfsg-1_armhf.changes
dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included)
dpkg-source --after-build .
dpkg-buildpackage: info: binary-only upload (no source included)
--------------------------------------------------------------------------------
Build finished at 2023-02-04T07:10:20Z
Finished
--------
I: Built successfully
+------------------------------------------------------------------------------+
| Post Build Chroot |
+------------------------------------------------------------------------------+
+------------------------------------------------------------------------------+
| Changes |
+------------------------------------------------------------------------------+
r-cran-openmx_2.21.1+dfsg-1_armhf.changes:
------------------------------------------
Format: 1.8
Date: Fri, 27 Jan 2023 09:32:58 +0100
Source: r-cran-openmx
Binary: r-cran-openmx r-cran-openmx-dbgsym
Architecture: armhf
Version: 2.21.1+dfsg-1
Distribution: bookworm-staging
Urgency: medium
Maintainer: Raspbian mythic lxc autobuilder 1 <root@raspbian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
r-cran-openmx - GNU R extended structural equation modelling
Changes:
r-cran-openmx (2.21.1+dfsg-1) unstable; urgency=medium
.
* New upstream version
* Standards-Version: 4.6.2 (routine-update)
* lintian-overrides (see lintian bug #1017966)
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Files:
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+------------------------------------------------------------------------------+
| Package contents |
+------------------------------------------------------------------------------+
r-cran-openmx-dbgsym_2.21.1+dfsg-1_armhf.deb
--------------------------------------------
new Debian package, version 2.0.
size 64899260 bytes: control archive=544 bytes.
402 bytes, 12 lines control
106 bytes, 1 lines md5sums
Package: r-cran-openmx-dbgsym
Source: r-cran-openmx
Version: 2.21.1+dfsg-1
Auto-Built-Package: debug-symbols
Architecture: armhf
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Installed-Size: 64139
Depends: r-cran-openmx (= 2.21.1+dfsg-1)
Section: debug
Priority: optional
Description: debug symbols for r-cran-openmx
Build-Ids: d0f7ba9a12d150987dde74cb1bb2a57e8c5483db
drwxr-xr-x root/root 0 2023-01-27 08:32 ./
drwxr-xr-x root/root 0 2023-01-27 08:32 ./usr/
drwxr-xr-x root/root 0 2023-01-27 08:32 ./usr/lib/
drwxr-xr-x root/root 0 2023-01-27 08:32 ./usr/lib/debug/
drwxr-xr-x root/root 0 2023-01-27 08:32 ./usr/lib/debug/.build-id/
drwxr-xr-x root/root 0 2023-01-27 08:32 ./usr/lib/debug/.build-id/d0/
-rw-r--r-- root/root 65667472 2023-01-27 08:32 ./usr/lib/debug/.build-id/d0/f7ba9a12d150987dde74cb1bb2a57e8c5483db.debug
drwxr-xr-x root/root 0 2023-01-27 08:32 ./usr/share/
drwxr-xr-x root/root 0 2023-01-27 08:32 ./usr/share/doc/
lrwxrwxrwx root/root 0 2023-01-27 08:32 ./usr/share/doc/r-cran-openmx-dbgsym -> r-cran-openmx
r-cran-openmx_2.21.1+dfsg-1_armhf.deb
-------------------------------------
new Debian package, version 2.0.
size 6457260 bytes: control archive=17432 bytes.
1545 bytes, 22 lines control
59604 bytes, 606 lines md5sums
Package: r-cran-openmx
Version: 2.21.1+dfsg-1
Architecture: armhf
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Installed-Size: 13448
Depends: r-base-core (>= 4.2.2.20221110-2), r-api-4.0, r-cran-digest, r-cran-mass, r-cran-matrix (>= 1.2-16), r-cran-rcpp, r-cran-rcppparallel, r-cran-lifecycle, r-cran-rcppeigen, r-cran-stanheaders (>= 2.10.0.2), r-cran-bh (>= 1.69.0-1), r-cran-rpf (>= 0.45), libc6 (>= 2.29), libgcc-s1 (>= 4.0), libgomp1 (>= 6), libstdc++6 (>= 12), python3
Recommends: r-cran-testthat, r-cran-numderiv
Suggests: r-cran-mvtnorm, r-cran-roxygen2 (>= 6.1), r-cran-snowfall, r-cran-lme4, r-cran-covr, r-cran-knitr, r-cran-markdown, r-cran-rmarkdown, r-cran-reshape2, r-cran-ggplot2
Section: gnu-r
Priority: optional
Homepage: https://cran.r-project.org/package=OpenMx
Description: GNU R extended structural equation modelling
Create structural equation models that can be manipulated
programmatically. Models may be specified with matrices or paths (LISREL
or RAM) Example models include confirmatory factor, multiple group,
mixture distribution, categorical threshold, modern test theory,
differential Fit functions include full information maximum likelihood,
maximum likelihood, and weighted least squares. equations, state space,
and many others. Support and advanced package binaries available at
<http://openmx.ssri.psu.edu>. The software is described in Neale,
Hunter, Pritikin, Zahery, Brick, Kirkpatrick, Estabrook, Bates, Maes, &
Boker (2016) <doi:10.1007/s11336-014-9435-8>.
drwxr-xr-x root/root 0 2023-01-27 08:32 ./
drwxr-xr-x root/root 0 2023-01-27 08:32 ./usr/
drwxr-xr-x root/root 0 2023-01-27 08:32 ./usr/lib/
drwxr-xr-x root/root 0 2023-01-27 08:32 ./usr/lib/R/
drwxr-xr-x root/root 0 2023-01-27 08:32 ./usr/lib/R/site-library/
drwxr-xr-x root/root 0 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/
-rw-r--r-- root/root 4834 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/CITATION
-rw-r--r-- root/root 6793 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/DESCRIPTION
-rw-r--r-- root/root 20966 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/INDEX
drwxr-xr-x root/root 0 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/Meta/
-rw-r--r-- root/root 12096 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/Meta/Rd.rds
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-rw-r--r-- root/root 1108 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/Meta/nsInfo.rds
-rw-r--r-- root/root 3369 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/Meta/package.rds
-rw-r--r-- root/root 333 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/Meta/vignette.rds
-rw-r--r-- root/root 2883 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/NAMESPACE
-rw-r--r-- root/root 78948 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/NEWS.md
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-rw-r--r-- root/root 1058 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/R/OpenMx
-rw-r--r-- root/root 2706147 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/R/OpenMx.rdb
-rw-r--r-- root/root 17413 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/R/OpenMx.rdx
-rw-r--r-- root/root 2274 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/R/sysdata.rdb
-rw-r--r-- root/root 162 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/R/sysdata.rdx
-rw-r--r-- root/root 7048 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/WORDLIST
drwxr-xr-x root/root 0 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/data/
-rw-r--r-- root/root 1507662 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/data/Rdata.rdb
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drwxr-xr-x root/root 0 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/debug/
drwxr-xr-x root/root 0 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/demo/
-rw-r--r-- root/root 11729 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/demo/AlternativeApproaches.R
-rw-r--r-- root/root 3952 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/demo/BivariateCorrelation.R
-rw-r--r-- root/root 6235 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/demo/BivariateHeterogeneity_MatrixRaw.R
-rw-r--r-- root/root 5772 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/demo/BivariateHeterogeneity_PathRaw.R
-rw-r--r-- root/root 12962 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/demo/BivariateSaturated.R
-rw-r--r-- root/root 4361 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/demo/BivariateSaturated_MatrixCov.R
-rw-r--r-- root/root 4462 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/demo/BivariateSaturated_MatrixCovCholesky.R
-rw-r--r-- root/root 3214 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/demo/BivariateSaturated_MatrixRaw.R
-rw-r--r-- root/root 3209 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/demo/BivariateSaturated_MatrixRawCholesky.R
-rw-r--r-- root/root 4415 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/demo/BivariateSaturated_PathCov.R
-rw-r--r-- root/root 3267 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/demo/BivariateSaturated_PathRaw.R
-rw-r--r-- root/root 4712 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/demo/DefinitionMeans_MatrixRaw.R
-rw-r--r-- root/root 4887 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/demo/DefinitionMeans_PathRaw.R
-rw-r--r-- root/root 5490 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/demo/GrowthMixtureModel_MatrixRaw.R
-rw-r--r-- root/root 4598 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/demo/GrowthMixtureModel_PathRaw.R
-rw-r--r-- root/root 4908 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/demo/LDE.R
-rw-r--r-- root/root 2184 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/demo/LISRELJointFactorModel.R
-rw-r--r-- root/root 5071 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/demo/LatentGrowthCurveModel_MatrixRaw.R
-rw-r--r-- root/root 3814 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/demo/LatentGrowthCurveModel_PathRaw.R
-rw-r--r-- root/root 3988 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/demo/LatentGrowthCurveModel_PathRaw_ModelRec.R
-rw-r--r-- root/root 3735 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/demo/LatentGrowthCurveModel_PathRaw_ObjectAdd.R
-rw-r--r-- root/root 2202 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/demo/MatrixAlgebra.R
-rw-r--r-- root/root 4101 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/demo/MultipleRegression_MatrixCov.R
-rw-r--r-- root/root 3661 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/demo/MultipleRegression_MatrixRaw.R
-rw-r--r-- root/root 3864 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/demo/MultipleRegression_PathCov.R
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-rw-r--r-- root/root 4805 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/demo/MultivariateRegression_MatrixCov.R
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-rw-r--r-- root/root 4363 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/demo/MultivariateRegression_PathCov.R
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-rw-r--r-- root/root 4084 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/demo/OneFactorJoint_MatrixRawRAM.R
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-rw-r--r-- root/root 2413 2023-01-27 08:32 ./usr/lib/R/site-library/OpenMx/demo/OneFactorMatrixDemo.R
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Purging /<<BUILDDIR>>
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| Summary |
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Build Architecture: armhf
Build-Space: 162636
Build-Time: 3194
Distribution: bookworm-staging
Host Architecture: armhf
Install-Time: 1190
Job: r-cran-openmx_2.21.1+dfsg-1
Machine Architecture: armhf
Package: r-cran-openmx
Package-Time: 4408
Source-Version: 2.21.1+dfsg-1
Space: 162636
Status: successful
Version: 2.21.1+dfsg-1
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Finished at 2023-02-04T07:10:20Z
Build needed 01:13:28, 162636k disk space